Lcy01g015900 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g015900
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr01: 37462873 .. 37465769 (-)
RNA-Seq ExpressionLcy01g015900
SyntenyLcy01g015900
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATGATATAAACAAGACGCCAACAACGGCTAACTCCATATTCGTCCGCTTTAAAAGAAAGATTTGAACAAGAGCCCAGTGGCTTTCGTTCCTTTTCTTTCCGGCGAGGCAACAGTCGAATTTCATCTCTGAGTTTGTAGCATATTTGCATCCCGTCATAAACTTTTGAAGCAAACGCTAGATTACACTGCCTTTAAAAGATAATGGTAGATGGTATTTTTGTCTCGATGTTGCTCGTTATTTCCGTTTCCTACCAAAAATTCTATCTGCCTTCACCAGGATTCTTCAATTCTGTACAATTTCTTCACCCAATCAAGAACACAACACCCACTTCTTCTTCGGTCATTTCAGCTGATCCATCATTGTGCAACTGCAGAAGCGTTTGTTACTTCTCTAGTGATCGCTGTAAACTCTTGCACTTCCATCTCCAATTTGCGGGGAATTCATGCCCGAGTAATCAAATCTTTGCTTTATAGAGATGGGTTCGTTGGTGATCAGCTGGTTACTTGTTATAATAAAATGGGTTATGCTGAAGATGCACAGAAGCTGTTTGATGATATGCCTGATAAGGATTTGGTTTCTTGGAACTCGCTGATTTCGGGTTTTTCTCGAGGAAGGTGTCTTGATATGACCCTCAAAGCATTTTACACCTTGAAGTTTGGAATGTCAGTTAAACCCAATGAGGTTACCATTCTGTCGATGATATTGGCTTGTAACGAAGCTTTGGATGCAGGGAAGTATGTTCATGGCTTTGCAATTAAAGTTGGTGTTTCTTTGGAAGTTAAGGTCGCTAATTCTCTTATTAACATGTATGGAAAGTCTGGAGATTTGATATCAGCTTGTAGATTATTTGAGGCCATCCCAGACCCGAATACAATATCGTGGAATTCAATAATTCAAGCTCAAGTTACCAATGGCTGTGCACAAGAAGGAATTGACTGTTTTAATAAGATGAGAAGGTTTGGAATGGAGCCGGATGAAGGAACTATCCTGGCAGTGCTTCAAGCTTGCGAGCATTTGGGTATAGGAAAATTGGCAGAAAGCATTCATGGTCTAATCTTCTACCATGGTCTAAGCGCAAGAATCACCATATCAACAGCGCTTTTAGATTTATATGCGAAATTGGGAAGATTAAGTGCTTCTCGTGATGTTTTTGGGGAAGTGAGTTGTGCAGATAGAGTTGCTTGGACAGCCATGCTTGCAGGATATGCAGCACATGGATTGGGTAGGGAAGCAATCAAGCTTTTCGAGAGCATGGCCGAGGTCGGTTTGGAGCCTGATCATGTAACCTTCACTCATTTGCTTAGCGCATGTAGTCATTCAGGGCTGGTCAGAGAGGGCAAAAGTTACTTCAATATGATGTCTGAAGTTTATGGAATTGAGCCAAGGATAGATCATTATTCATGTATGGTTGATCTACTCGGTCGCTGTGGACTTTTGAATGATGCTTATGAGGTGATACAAAACATGCCTATGGAGCCCAATGCTGGCGTGTGGGGTGCCCTTCTTGGTGCTTGTAGGGTCTATGGTAACATTGAACTTGGTAAGGAAGTTGCAGAGCATTTGATTAACTTGGAACCTCTGGACCCCAGAAACTACATCATGTTATCAAATATGTATTCTGCATCTCGTTCTTGGAAGGATGCTGCAAAAGTGAGAGCCTTGCTAAAGGAGAGAGGTCTGAAAAGAACCCCAGGATGTAGCTCCATTGAATATGGAAACAAGATCCACTGCTTCTTCGTGGGCGATCGATCTCACCATGAGACGGAAAAGATCTATTCCAAGCTCAAAGAATTGCTCAGGAAAATAAGGAAAGCTGGATATAGTTCCAAAACAGAATATGTTCTACAAGACGTGGAAGAGGAAGTCAAGGAGGATATGATAAACAAGCACAGCGAGAAGTTAGCCATCGCTTTTGGGCTGTTGGTGAGTAAAGAAGGAGCACCTTTAATCATAACAAAGAATCTTAGAATTTGTGGAGATTGTCATAGCACGGCAAAGCTCATTTCACTGATTGAGAAGCGTACTATTATTATCCGAGATCCAAAACGCTTTCACCATTTCTCTGATGGATTCTGTTCTTGTGCAGACTACTGGTAAGTCTTTACTGTGCTTCATAATGGTGCGAATGCATATTTATACCTCACATATATAGCTAAGCTACATACATATATAGCTTGTTGAGCTTTTATGTGCTAATATAATCCAGTTTTTGGTCTGCTGTCTAATAGCTTGATTTAGGCATCTTTTGTATGGTTCCTTGTAAAAAATAAGTTATGATCATAGCTTGGAGAGGTGTTAAATGATGTGCCGTGACCAAACCACAAAAATAAACATCGACCATAACCTATATGTCAATTTGATACAAATGTAATATAGTCAATTTGACACGATCTATAACCTGGCCCATAGTGCAGTTCATCGGTTTATGTTGGGTTGAGTCAAGAGTCAATGTCAAATACGAATCGTATCATGTTGGTTTATCATTTGTAAGACTTGCGAGTTAGATTAATTCTAGGTTAAAATAGATTGTCATTGGTTAAGTTTGTTCAACCCTTAAAATTTTAAACTTGAATTAACTTGAAAAATTATAATCATGAATATTAAAATTTAACGTGGACAGGTTGTAATGAGCTAGTACAAGTTATGGTCTTTTCTTGGTTCCAAGGAATTTTGGAATTTAAAATTGAGGATAGATTTCATCAAGTATCTAGGTTATTTTATATTCACAAAGACCATAGAAAGATCTCTTTCTTTAAGTCTCAAAGATCTCTTGCCAATAAATAAGAAGTGTATTTTCTCACATATGAGGCACGTGAGATGGCAAATGAGACCAACTAAAGAAGTGAGTGAAGTGTGGATTAGAGAATGCAAAAAAGTCTTCTCTCAAAATATCT

mRNA sequence

CGATGATATAAACAAGACGCCAACAACGGCTAACTCCATATTCGTCCGCTTTAAAAGAAAGATTTGAACAAGAGCCCAGTGGCTTTCGTTCCTTTTCTTTCCGGCGAGGCAACAGTCGAATTTCATCTCTGAGTTTGTAGCATATTTGCATCCCGTCATAAACTTTTGAAGCAAACGCTAGATTACACTGCCTTTAAAAGATAATGGTAGATGGTATTTTTGTCTCGATGTTGCTCGTTATTTCCGTTTCCTACCAAAAATTCTATCTGCCTTCACCAGGATTCTTCAATTCTGTACAATTTCTTCACCCAATCAAGAACACAACACCCACTTCTTCTTCGGTCATTTCAGCTGATCCATCATTGTGCAACTGCAGAAGCGTTTGTTACTTCTCTAGTGATCGCTGTAAACTCTTGCACTTCCATCTCCAATTTGCGGGGAATTCATGCCCGAGTAATCAAATCTTTGCTTTATAGAGATGGGTTCGTTGGTGATCAGCTGGTTACTTGTTATAATAAAATGGGTTATGCTGAAGATGCACAGAAGCTGTTTGATGATATGCCTGATAAGGATTTGGTTTCTTGGAACTCGCTGATTTCGGGTTTTTCTCGAGGAAGGTGTCTTGATATGACCCTCAAAGCATTTTACACCTTGAAGTTTGGAATGTCAGTTAAACCCAATGAGGTTACCATTCTGTCGATGATATTGGCTTGTAACGAAGCTTTGGATGCAGGGAAGTATGTTCATGGCTTTGCAATTAAAGTTGGTGTTTCTTTGGAAGTTAAGGTCGCTAATTCTCTTATTAACATGTATGGAAAGTCTGGAGATTTGATATCAGCTTGTAGATTATTTGAGGCCATCCCAGACCCGAATACAATATCGTGGAATTCAATAATTCAAGCTCAAGTTACCAATGGCTGTGCACAAGAAGGAATTGACTGTTTTAATAAGATGAGAAGGTTTGGAATGGAGCCGGATGAAGGAACTATCCTGGCAGTGCTTCAAGCTTGCGAGCATTTGGGTATAGGAAAATTGGCAGAAAGCATTCATGGTCTAATCTTCTACCATGGTCTAAGCGCAAGAATCACCATATCAACAGCGCTTTTAGATTTATATGCGAAATTGGGAAGATTAAGTGCTTCTCGTGATGTTTTTGGGGAAGTGAGTTGTGCAGATAGAGTTGCTTGGACAGCCATGCTTGCAGGATATGCAGCACATGGATTGGGTAGGGAAGCAATCAAGCTTTTCGAGAGCATGGCCGAGGTCGGTTTGGAGCCTGATCATGTAACCTTCACTCATTTGCTTAGCGCATGTAGTCATTCAGGGCTGGTCAGAGAGGGCAAAAGTTACTTCAATATGATGTCTGAAGTTTATGGAATTGAGCCAAGGATAGATCATTATTCATGTATGGTTGATCTACTCGGTCGCTGTGGACTTTTGAATGATGCTTATGAGGTGATACAAAACATGCCTATGGAGCCCAATGCTGGCGTGTGGGGTGCCCTTCTTGGTGCTTGTAGGGTCTATGGTAACATTGAACTTGGTAAGGAAGTTGCAGAGCATTTGATTAACTTGGAACCTCTGGACCCCAGAAACTACATCATGTTATCAAATATGTATTCTGCATCTCGTTCTTGGAAGGATGCTGCAAAAGTGAGAGCCTTGCTAAAGGAGAGAGGTCTGAAAAGAACCCCAGGATGTAGCTCCATTGAATATGGAAACAAGATCCACTGCTTCTTCGTGGGCGATCGATCTCACCATGAGACGGAAAAGATCTATTCCAAGCTCAAAGAATTGCTCAGGAAAATAAGGAAAGCTGGATATAGTTCCAAAACAGAATATGTTCTACAAGACGTGGAAGAGGAAGTCAAGGAGGATATGATAAACAAGCACAGCGAGAAGTTAGCCATCGCTTTTGGGCTGTTGGTGAGTAAAGAAGGAGCACCTTTAATCATAACAAAGAATCTTAGAATTTGTGGAGATTGTCATAGCACGGCAAAGCTCATTTCACTGATTGAGAAGCGTACTATTATTATCCGAGATCCAAAACGCTTTCACCATTTCTCTGATGGATTCTGTTCTTGTGCAGACTACTGGTAAGTCTTTACTGTGCTTCATAATGGTGCGAATGCATATTTATACCTCACATATATAGCTAAGCTACATACATATATAGCTTGTTGAGCTTTTATGTGCTAATATAATCCAGTTTTTGGTCTGCTGTCTAATAGCTTGATTTAGGCATCTTTTGTATGGTTCCTTGTAAAAAATAAGTTATGATCATAGCTTGGAGAGGTGTTAAATGATGTGCCGTGACCAAACCACAAAAATAAACATCGACCATAACCTATATGTCAATTTGATACAAATGTAATATAGTCAATTTGACACGATCTATAACCTGGCCCATAGTGCAGTTCATCGGTTTATGTTGGGTTGAGTCAAGAGTCAATGTCAAATACGAATCGTATCATGTTGGTTTATCATTTGTAAGACTTGCGAGTTAGATTAATTCTAGGTTAAAATAGATTGTCATTGGTTAAGTTTGTTCAACCCTTAAAATTTTAAACTTGAATTAACTTGAAAAATTATAATCATGAATATTAAAATTTAACGTGGACAGGTTGTAATGAGCTAGTACAAGTTATGGTCTTTTCTTGGTTCCAAGGAATTTTGGAATTTAAAATTGAGGATAGATTTCATCAAGTATCTAGGTTATTTTATATTCACAAAGACCATAGAAAGATCTCTTTCTTTAAGTCTCAAAGATCTCTTGCCAATAAATAAGAAGTGTATTTTCTCACATATGAGGCACGTGAGATGGCAAATGAGACCAACTAAAGAAGTGAGTGAAGTGTGGATTAGAGAATGCAAAAAAGTCTTCTCTCAAAATATCT

Coding sequence (CDS)

ATGGTATTTTTGTCTCGATGTTGCTCGTTATTTCCGTTTCCTACCAAAAATTCTATCTGCCTTCACCAGGATTCTTCAATTCTGTACAATTTCTTCACCCAATCAAGAACACAACACCCACTTCTTCTTCGGTCATTTCAGCTGATCCATCATTGTGCAACTGCAGAAGCGTTTGTTACTTCTCTAGTGATCGCTGTAAACTCTTGCACTTCCATCTCCAATTTGCGGGGAATTCATGCCCGAGTAATCAAATCTTTGCTTTATAGAGATGGGTTCGTTGGTGATCAGCTGGTTACTTGTTATAATAAAATGGGTTATGCTGAAGATGCACAGAAGCTGTTTGATGATATGCCTGATAAGGATTTGGTTTCTTGGAACTCGCTGATTTCGGGTTTTTCTCGAGGAAGGTGTCTTGATATGACCCTCAAAGCATTTTACACCTTGAAGTTTGGAATGTCAGTTAAACCCAATGAGGTTACCATTCTGTCGATGATATTGGCTTGTAACGAAGCTTTGGATGCAGGGAAGTATGTTCATGGCTTTGCAATTAAAGTTGGTGTTTCTTTGGAAGTTAAGGTCGCTAATTCTCTTATTAACATGTATGGAAAGTCTGGAGATTTGATATCAGCTTGTAGATTATTTGAGGCCATCCCAGACCCGAATACAATATCGTGGAATTCAATAATTCAAGCTCAAGTTACCAATGGCTGTGCACAAGAAGGAATTGACTGTTTTAATAAGATGAGAAGGTTTGGAATGGAGCCGGATGAAGGAACTATCCTGGCAGTGCTTCAAGCTTGCGAGCATTTGGGTATAGGAAAATTGGCAGAAAGCATTCATGGTCTAATCTTCTACCATGGTCTAAGCGCAAGAATCACCATATCAACAGCGCTTTTAGATTTATATGCGAAATTGGGAAGATTAAGTGCTTCTCGTGATGTTTTTGGGGAAGTGAGTTGTGCAGATAGAGTTGCTTGGACAGCCATGCTTGCAGGATATGCAGCACATGGATTGGGTAGGGAAGCAATCAAGCTTTTCGAGAGCATGGCCGAGGTCGGTTTGGAGCCTGATCATGTAACCTTCACTCATTTGCTTAGCGCATGTAGTCATTCAGGGCTGGTCAGAGAGGGCAAAAGTTACTTCAATATGATGTCTGAAGTTTATGGAATTGAGCCAAGGATAGATCATTATTCATGTATGGTTGATCTACTCGGTCGCTGTGGACTTTTGAATGATGCTTATGAGGTGATACAAAACATGCCTATGGAGCCCAATGCTGGCGTGTGGGGTGCCCTTCTTGGTGCTTGTAGGGTCTATGGTAACATTGAACTTGGTAAGGAAGTTGCAGAGCATTTGATTAACTTGGAACCTCTGGACCCCAGAAACTACATCATGTTATCAAATATGTATTCTGCATCTCGTTCTTGGAAGGATGCTGCAAAAGTGAGAGCCTTGCTAAAGGAGAGAGGTCTGAAAAGAACCCCAGGATGTAGCTCCATTGAATATGGAAACAAGATCCACTGCTTCTTCGTGGGCGATCGATCTCACCATGAGACGGAAAAGATCTATTCCAAGCTCAAAGAATTGCTCAGGAAAATAAGGAAAGCTGGATATAGTTCCAAAACAGAATATGTTCTACAAGACGTGGAAGAGGAAGTCAAGGAGGATATGATAAACAAGCACAGCGAGAAGTTAGCCATCGCTTTTGGGCTGTTGGTGAGTAAAGAAGGAGCACCTTTAATCATAACAAAGAATCTTAGAATTTGTGGAGATTGTCATAGCACGGCAAAGCTCATTTCACTGATTGAGAAGCGTACTATTATTATCCGAGATCCAAAACGCTTTCACCATTTCTCTGATGGATTCTGTTCTTGTGCAGACTACTGGTAA

Protein sequence

MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHPLLLRSFQLIHHCATAEAFVTSLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDKDLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYVHGFAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQEGIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLDLYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW
Homology
BLAST of Lcy01g015900 vs. ExPASy Swiss-Prot
Match: Q9FND6 (Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H15 PE=2 SV=1)

HSP 1 Score: 707.2 bits (1824), Expect = 1.6e-202
Identity = 346/581 (59.55%), Postives = 435/581 (74.87%), Query Frame = 0

Query: 56  EAFVTSLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFD 115
           +A V+SL+ AV SC SI   R +H +V+KS+ YR GF+GDQLV CY ++G+   A+KLFD
Sbjct: 31  DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90

Query: 116 DMPDKDLVSWNSLISGFS----RGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILAC--N 175
           +MP++DLVSWNSLISG+S     G+C ++  +   +    +  +PNEVT LSMI AC   
Sbjct: 91  EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS---EVGFRPNEVTFLSMISACVYG 150

Query: 176 EALDAGKYVHGFAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSII 235
            + + G+ +HG  +K GV  EVKV N+ IN YGK+GDL S+C+LFE +   N +SWN++I
Sbjct: 151 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 210

Query: 236 QAQVTNGCAQEGIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLS 295
              + NG A++G+  FN  RR G EPD+ T LAVL++CE +G+ +LA+ IHGLI + G S
Sbjct: 211 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 270

Query: 296 ARITISTALLDLYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESM 355
               I+TALLDLY+KLGRL  S  VF E++  D +AWTAMLA YA HG GR+AIK FE M
Sbjct: 271 GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 330

Query: 356 AEVGLEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGL 415
              G+ PDHVTFTHLL+ACSHSGLV EGK YF  MS+ Y I+PR+DHYSCMVDLLGR GL
Sbjct: 331 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 390

Query: 416 LNDAYEVIQNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNM 475
           L DAY +I+ MPMEP++GVWGALLGACRVY + +LG + AE L  LEP D RNY+MLSN+
Sbjct: 391 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNI 450

Query: 476 YSASRSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKEL 535
           YSAS  WKDA+++R L+K++GL R  GCS IE+GNKIH F VGD SH E+EKI  KLKE+
Sbjct: 451 YSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 510

Query: 536 LRKIR-KAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRI 595
            +K++ + GY SKTE+VL DV E+VKE+MIN+HSEK+A+AFGLLV     P+II KNLRI
Sbjct: 511 RKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRI 570

Query: 596 CGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           CGDCH TAK ISLIEKR IIIRD KRFHHF DG CSC+DYW
Sbjct: 571 CGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608

BLAST of Lcy01g015900 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 1.9e-134
Identity = 233/546 (42.67%), Postives = 349/546 (63.92%), Query Frame = 0

Query: 88  YRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDKDLVSWNSLISGFSRGRCLDMTLKAFYT 147
           +RD      L+  Y   GY E+AQKLFD++P KD+VSWN++ISG++        L+ F  
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256

Query: 148 LKFGMSVKPNEVTILSMILACNE--ALDAGKYVHGFAIKVGVSLEVKVANSLINMYGKSG 207
           +    +V+P+E T+++++ AC +  +++ G+ VH +    G    +K+ N+LI++Y K G
Sbjct: 257 M-MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 316

Query: 208 DLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQEGIDCFNKMRRFGMEPDEGTILAVLQ 267
           +L +AC LFE +P  + ISWN++I         +E +  F +M R G  P++ T+L++L 
Sbjct: 317 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 376

Query: 268 ACEHLGIGKLAESIHGLI--FYHGLSARITISTALLDLYAKLGRLSASRDVFGEVSCADR 327
           AC HLG   +   IH  I     G++   ++ T+L+D+YAK G + A+  VF  +     
Sbjct: 377 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 436

Query: 328 VAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVTFTHLLSACSHSGLVREGKSYFNM 387
            +W AM+ G+A HG    +  LF  M ++G++PD +TF  LLSACSHSG++  G+  F  
Sbjct: 437 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 496

Query: 388 MSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVYGNIE 447
           M++ Y + P+++HY CM+DLLG  GL  +A E+I  M MEP+  +W +LL AC+++GN+E
Sbjct: 497 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 556

Query: 448 LGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGCSSIEYG 507
           LG+  AE+LI +EP +P +Y++LSN+Y+++  W + AK RALL ++G+K+ PGCSSIE  
Sbjct: 557 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 616

Query: 508 NKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSE 567
           + +H F +GD+ H    +IY  L+E+   + KAG+   T  VLQ++EEE KE  +  HSE
Sbjct: 617 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 676

Query: 568 KLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFC 627
           KLAIAFGL+ +K G  L I KNLR+C +CH   KLIS I KR II RD  RFHHF DG C
Sbjct: 677 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 736

Query: 628 SCADYW 630
           SC DYW
Sbjct: 737 SCNDYW 741

BLAST of Lcy01g015900 vs. ExPASy Swiss-Prot
Match: O81767 (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX=3702 GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 458.8 bits (1179), Expect = 1.0e-127
Identity = 230/576 (39.93%), Postives = 356/576 (61.81%), Query Frame = 0

Query: 61  SLVIAVNSCTSISNL-RG--IHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDM 120
           ++V  +++CT   +  RG  IH+  IK  L  + FV ++L+  Y + G   D QK+FD M
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308

Query: 121 PDKDLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSM--ILACNEALDAG 180
             +DL+SWNS+I  +         +  F  ++    ++P+ +T++S+  IL+    + A 
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS-RIQPDCLTLISLASILSQLGDIRAC 368

Query: 181 KYVHGFAIKVGVSLE-VKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVT 240
           + V GF ++ G  LE + + N+++ MY K G + SA  +F  +P+ + ISWN+II     
Sbjct: 369 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 428

Query: 241 NGCAQEGIDCFNKMRRFG-MEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARIT 300
           NG A E I+ +N M   G +  ++GT ++VL AC   G  +    +HG +  +GL   + 
Sbjct: 429 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 488

Query: 301 ISTALLDLYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVG 360
           + T+L D+Y K GRL  +  +F ++   + V W  ++A +  HG G +A+ LF+ M + G
Sbjct: 489 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 548

Query: 361 LEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDA 420
           ++PDH+TF  LLSACSHSGLV EG+  F MM   YGI P + HY CMVD+ GR G L  A
Sbjct: 549 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 608

Query: 421 YEVIQNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSAS 480
            + I++M ++P+A +WGALL ACRV+GN++LGK  +EHL  +EP     +++LSNMY+++
Sbjct: 609 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 668

Query: 481 RSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKI 540
             W+   ++R++   +GL++TPG SS+E  NK+  F+ G+++H   E++Y +L  L  K+
Sbjct: 669 GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 728

Query: 541 RKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCH 600
           +  GY     +VLQDVE++ KE ++  HSE+LAIAF L+ +     + I KNLR+CGDCH
Sbjct: 729 KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCH 788

Query: 601 STAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           S  K IS I +R II+RD  RFHHF +G CSC DYW
Sbjct: 789 SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of Lcy01g015900 vs. ExPASy Swiss-Prot
Match: Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 1.6e-125
Identity = 229/574 (39.90%), Postives = 347/574 (60.45%), Query Frame = 0

Query: 59  VTSLVIAVNSC-TSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDM 118
           +TS++ A +S    +S  + +H   IK     D FV   L+  Y++    ++A+ LF + 
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ER 478

Query: 119 PDKDLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACN--EALDAG 178
            + DLV+WN++++G+++      TLK F  L      + ++ T+ ++   C    A++ G
Sbjct: 479 HNFDLVAWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDFTLATVFKTCGFLFAINQG 538

Query: 179 KYVHGFAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTN 238
           K VH +AIK G  L++ V++ +++MY K GD+ +A   F++IP P+ ++W ++I   + N
Sbjct: 539 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIEN 598

Query: 239 GCAQEGIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITIS 298
           G  +     F++MR  G+ PDE TI  + +A   L   +    IH        +    + 
Sbjct: 599 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 658

Query: 299 TALLDLYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLE 358
           T+L+D+YAK G +  +  +F  +   +  AW AML G A HG G+E ++LF+ M  +G++
Sbjct: 659 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 718

Query: 359 PDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYE 418
           PD VTF  +LSACSHSGLV E   +   M   YGI+P I+HYSC+ D LGR GL+  A  
Sbjct: 719 PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAEN 778

Query: 419 VIQNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRS 478
           +I++M ME +A ++  LL ACRV G+ E GK VA  L+ LEPLD   Y++LSNMY+A+  
Sbjct: 779 LIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASK 838

Query: 479 WKDAAKVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRK 538
           W +    R ++K   +K+ PG S IE  NKIH F V DRS+ +TE IY K+K+++R I++
Sbjct: 839 WDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQ 898

Query: 539 AGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHST 598
            GY  +T++ L DVEEE KE  +  HSEKLA+AFGLL +    P+ + KNLR+CGDCH+ 
Sbjct: 899 EGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNA 958

Query: 599 AKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
            K I+ +  R I++RD  RFH F DG CSC DYW
Sbjct: 959 MKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990

BLAST of Lcy01g015900 vs. ExPASy Swiss-Prot
Match: Q9LZ19 (Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 450.7 bits (1158), Expect = 2.8e-125
Identity = 215/561 (38.32%), Postives = 348/561 (62.03%), Query Frame = 0

Query: 71  SISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDKDLVSWNSLIS 130
           ++   +  H ++I+  L  D  + + L+  Y+K G+ E A+++FD M ++ LVSWN++I 
Sbjct: 76  AVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG 135

Query: 131 GFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDA--GKYVHGFAIKVGVS 190
            ++R R     L  F  ++     K +E TI S++ AC    DA   K +H  ++K  + 
Sbjct: 136 LYTRNRMESEALDIFLEMR-NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCID 195

Query: 191 LEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQEGIDCFNKM 250
           L + V  +L+++Y K G +  A ++FE++ D ++++W+S++   V N   +E +  + + 
Sbjct: 196 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 255

Query: 251 RRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLDLYAKLGRL 310
           +R  +E ++ T+ +V+ AC +L      + +H +I   G  + + ++++ +D+YAK G L
Sbjct: 256 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 315

Query: 311 SASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVTFTHLLSAC 370
             S  +F EV   +   W  +++G+A H   +E + LFE M + G+ P+ VTF+ LLS C
Sbjct: 316 RESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 375

Query: 371 SHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGV 430
            H+GLV EG+ +F +M   YG+ P + HYSCMVD+LGR GLL++AYE+I+++P +P A +
Sbjct: 376 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 435

Query: 431 WGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKE 490
           WG+LL +CRVY N+EL +  AE L  LEP +  N+++LSN+Y+A++ W++ AK R LL++
Sbjct: 436 WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 495

Query: 491 RGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSSKTEYVLQD 550
             +K+  G S I+  +K+H F VG+  H    +I S L  L+ K RK GY    E+ L D
Sbjct: 496 CDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHD 555

Query: 551 VEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTII 610
           VE   KE+++ +HSEKLA+ FGL+   E +P+ I KNLRIC DCH   K  S+  +R II
Sbjct: 556 VEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFII 615

Query: 611 IRDPKRFHHFSDGFCSCADYW 630
           +RD  RFHHFSDG CSC D+W
Sbjct: 616 VRDVNRFHHFSDGHCSCGDFW 635

BLAST of Lcy01g015900 vs. ExPASy TrEMBL
Match: A0A1S3BBW7 (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g40410, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103488375 PE=3 SV=1)

HSP 1 Score: 1103.2 bits (2852), Expect = 0.0e+00
Identity = 550/631 (87.16%), Postives = 578/631 (91.60%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHP--LLLRSFQLIHHCATAEAF 60
           MVF S CCSLF FPTK SI L +DSSILYNFF QSRTQ+P  LLLRSF LI  CA +EA 
Sbjct: 1   MVFSSPCCSLFLFPTKISIPLRRDSSILYNFFIQSRTQYPLLLLLRSFHLIRPCAASEAL 60

Query: 61  VTSLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMP 120
           V+ L+IAV SCTSISN R IHARV KSLLYRDGF+GDQLVTCYNK+GYAEDAQKLFDDMP
Sbjct: 61  VSDLLIAVKSCTSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDAQKLFDDMP 120

Query: 121 DKDLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYV 180
            KDLVSWNSLISGFS  RCL MTL AFYT+KF MS+KPNEVTILSMI ACN ALDAGKY+
Sbjct: 121 HKDLVSWNSLISGFS--RCLHMTLTAFYTMKFEMSIKPNEVTILSMISACNGALDAGKYI 180

Query: 181 HGFAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCA 240
           HGFAIKVG +LEVKVANSLINMYGKSGDL SACRLFEAIPDPNT+SWNSII AQVTNGCA
Sbjct: 181 HGFAIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCA 240

Query: 241 QEGIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTAL 300
           +EGI  FNKMRRFG+E DEGTILA+LQAC HLG+GKLAESIH L+F  G  A+ITI+TAL
Sbjct: 241 REGIXFFNKMRRFGIEQDEGTILALLQACLHLGVGKLAESIHALMFCTGFGAKITIATAL 300

Query: 301 LDLYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDH 360
           LD YAKLGRLSAS DVF EV  ADRVAWTAMLAGYAAHGLGREAIKLFESM   GLEPDH
Sbjct: 301 LDTYAKLGRLSASCDVFREVGFADRVAWTAMLAGYAAHGLGREAIKLFESMVNEGLEPDH 360

Query: 361 VTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQ 420
           VTFTHLLSACSHSGLV EGKSYFN+MSEVYGIEPR+DHYSCMVDLLGRCGLLNDAYEVI+
Sbjct: 361 VTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIR 420

Query: 421 NMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKD 480
           NMPMEPNAGVWGALLGACRV+GN+ELGKEVAEHLINLEPLDPRNYIMLSN+YSASRSWKD
Sbjct: 421 NMPMEPNAGVWGALLGACRVHGNVELGKEVAEHLINLEPLDPRNYIMLSNIYSASRSWKD 480

Query: 481 AAKVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGY 540
           AAK+RALLKERGLKRTPGCSSIEYGNK H FFVGDRSH ETEKIYSKL+ELL KI+KAGY
Sbjct: 481 AAKMRALLKERGLKRTPGCSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIKKAGY 540

Query: 541 SSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKL 600
           SSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEG PLIITKNLRICGDCHSTAKL
Sbjct: 541 SSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEPLIITKNLRICGDCHSTAKL 600

Query: 601 ISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           ISLIEKRTIIIRDPKRFHHFSDGFCSCADYW
Sbjct: 601 ISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 629

BLAST of Lcy01g015900 vs. ExPASy TrEMBL
Match: A0A6J1CSK8 (pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013924 PE=3 SV=1)

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 538/629 (85.53%), Postives = 573/629 (91.10%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHPLLLRSFQLIHHCATAEAFVT 60
           MVFL RCCSLF FPT+  I  +QD S+L+ F T SR  HPLLLRSF  +H   T+EA V+
Sbjct: 1   MVFLPRCCSLFLFPTEFFIRHYQDPSVLFKFLTHSRKHHPLLLRSFHSVHQLETSEALVS 60

Query: 61  SLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDK 120
           +LVIAVNSCTS+SN R IHARVIKS LYRDGF+GDQL  CYN +G AEDAQKLFDDMPDK
Sbjct: 61  ALVIAVNSCTSVSNCRTIHARVIKSFLYRDGFIGDQLAACYNNLGCAEDAQKLFDDMPDK 120

Query: 121 DLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYVHG 180
           DLVSWNSLISGFSRG+CLDMTLKAFY LKF MS+KPNE+TILSMI ACNEALDAGKY+HG
Sbjct: 121 DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHG 180

Query: 181 FAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQE 240
           FA+KVGV LEVKV NSLINMYGK GDL SACRLFEA+P PNTISWNSII AQVTNGCAQ+
Sbjct: 181 FAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQK 240

Query: 241 GIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLD 300
           GIDCFNKMRR G+EPDEGTILAVLQACEHLGIGKLAE IHGLIF +GL  +I+I+TALLD
Sbjct: 241 GIDCFNKMRRLGIEPDEGTILAVLQACEHLGIGKLAEGIHGLIFRNGLGTKISIATALLD 300

Query: 301 LYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVT 360
           L+AKLGRLSAS DVF E+ CADRVAWTAMLAGYAAHGLGREAIKLFESM E GL PDHVT
Sbjct: 301 LFAKLGRLSASCDVFWEMGCADRVAWTAMLAGYAAHGLGREAIKLFESMTENGLVPDHVT 360

Query: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNM 420
           FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPR+DHYSCMVDLLGRCGLLNDAYEVIQNM
Sbjct: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRLDHYSCMVDLLGRCGLLNDAYEVIQNM 420

Query: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA 480
           PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLD RNYIMLSNMYSASRSWKDAA
Sbjct: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDSRNYIMLSNMYSASRSWKDAA 480

Query: 481 KVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSS 540
           KVRALLKERGL+R PG SSIE+ NKIHCF VGD+SH ++EKIYSKL+ELL KIRKAGYS 
Sbjct: 481 KVRALLKERGLRRNPGSSSIEHENKIHCFLVGDQSHPKSEKIYSKLEELLEKIRKAGYSP 540

Query: 541 KTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLIS 600
           +TEYVLQDVEEEVKEDMINKHSEKLAIAFGLLV KEGA LIITKNLRICGDCH+TAKLIS
Sbjct: 541 RTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVCKEGAALIITKNLRICGDCHNTAKLIS 600

Query: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           LIE+RTIIIRDPKRFHHFSDGFCSC DYW
Sbjct: 601 LIERRTIIIRDPKRFHHFSDGFCSCGDYW 629

BLAST of Lcy01g015900 vs. ExPASy TrEMBL
Match: A0A6J1CSX2 (pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013924 PE=3 SV=1)

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 538/629 (85.53%), Postives = 573/629 (91.10%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHPLLLRSFQLIHHCATAEAFVT 60
           MVFL RCCSLF FPT+  I  +QD S+L+ F T SR  HPLLLRSF  +H   T+EA V+
Sbjct: 1   MVFLPRCCSLFLFPTEFFIRHYQDPSVLFKFLTHSRKHHPLLLRSFHSVHQLETSEALVS 60

Query: 61  SLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDK 120
           +LVIAVNSCTS+SN R IHARVIKS LYRDGF+GDQL  CYN +G AEDAQKLFDDMPDK
Sbjct: 61  ALVIAVNSCTSVSNCRTIHARVIKSFLYRDGFIGDQLAACYNNLGCAEDAQKLFDDMPDK 120

Query: 121 DLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYVHG 180
           DLVSWNSLISGFSRG+CLDMTLKAFY LKF MS+KPNE+TILSMI ACNEALDAGKY+HG
Sbjct: 121 DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHG 180

Query: 181 FAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQE 240
           FA+KVGV LEVKV NSLINMYGK GDL SACRLFEA+P PNTISWNSII AQVTNGCAQ+
Sbjct: 181 FAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQK 240

Query: 241 GIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLD 300
           GIDCFNKMRR G+EPDEGTILAVLQACEHLGIGKLAE IHGLIF +GL  +I+I+TALLD
Sbjct: 241 GIDCFNKMRRLGIEPDEGTILAVLQACEHLGIGKLAEGIHGLIFRNGLGTKISIATALLD 300

Query: 301 LYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVT 360
           L+AKLGRLSAS DVF E+ CADRVAWTAMLAGYAAHGLGREAIKLFESM E GL PDHVT
Sbjct: 301 LFAKLGRLSASCDVFWEMGCADRVAWTAMLAGYAAHGLGREAIKLFESMTENGLVPDHVT 360

Query: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNM 420
           FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPR+DHYSCMVDLLGRCGLLNDAYEVIQNM
Sbjct: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRLDHYSCMVDLLGRCGLLNDAYEVIQNM 420

Query: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA 480
           PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLD RNYIMLSNMYSASRSWKDAA
Sbjct: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDSRNYIMLSNMYSASRSWKDAA 480

Query: 481 KVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSS 540
           KVRALLKERGL+R PG SSIE+ NKIHCF VGD+SH ++EKIYSKL+ELL KIRKAGYS 
Sbjct: 481 KVRALLKERGLRRNPGSSSIEHENKIHCFLVGDQSHPKSEKIYSKLEELLEKIRKAGYSP 540

Query: 541 KTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLIS 600
           +TEYVLQDVEEEVKEDMINKHSEKLAIAFGLLV KEGA LIITKNLRICGDCH+TAKLIS
Sbjct: 541 RTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVCKEGAALIITKNLRICGDCHNTAKLIS 600

Query: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           LIE+RTIIIRDPKRFHHFSDGFCSC DYW
Sbjct: 601 LIERRTIIIRDPKRFHHFSDGFCSCGDYW 629

BLAST of Lcy01g015900 vs. ExPASy TrEMBL
Match: A0A6J1K9V7 (pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111492409 PE=3 SV=1)

HSP 1 Score: 1100.9 bits (2846), Expect = 0.0e+00
Identity = 543/629 (86.33%), Postives = 575/629 (91.41%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHPLLLRSFQLIHHCATAEAFVT 60
           MVFL   CSLF  PTKNS  L Q+ SILYNFF QSRTQ+PLLLR F  I HC  AEA V+
Sbjct: 1   MVFLCGFCSLFLLPTKNSTRLRQECSILYNFFNQSRTQYPLLLRPFHPIRHCVAAEALVS 60

Query: 61  SLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDK 120
           +LVIAV SCTSIS+ RGIHARVIKS LYRDGF+GDQLVTCYNK+GYAEDAQK+FDDMPD+
Sbjct: 61  ALVIAVKSCTSISSCRGIHARVIKSFLYRDGFIGDQLVTCYNKLGYAEDAQKVFDDMPDR 120

Query: 121 DLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYVHG 180
           DLVSWNSLI GFS  RCL +TLKAF T+KF MSVKPNEVTILSMI ACN ALD G+Y+HG
Sbjct: 121 DLVSWNSLICGFS--RCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYIHG 180

Query: 181 FAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQE 240
           FAIK+GVSLEVKV NS INMYGKSGDL SACRLFEAIP PN +SWNSII A+VTNGCA E
Sbjct: 181 FAIKIGVSLEVKVVNSFINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAARVTNGCAGE 240

Query: 241 GIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLD 300
           G+ CFNKMR FGMEPDEGTILA+LQAC HLG+GKLAESIHGLIF  GL A+I I+TALLD
Sbjct: 241 GVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQIAIATALLD 300

Query: 301 LYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVT 360
           LYAKLGRLSAS DVFGEV CADRVAWTAMLAGYAAHGLGREAIKLFE+MAE GLEPDHVT
Sbjct: 301 LYAKLGRLSASYDVFGEVGCADRVAWTAMLAGYAAHGLGREAIKLFENMAERGLEPDHVT 360

Query: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNM 420
           FTHLLSACSHSGLVREGK YFN+MSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVI++M
Sbjct: 361 FTHLLSACSHSGLVREGKRYFNLMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRSM 420

Query: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA 480
           PMEPNAGVWGALLGACRVYGNIELGKEVAEHLI+LEPLDPRNYIMLSNMY+A+ SWKDAA
Sbjct: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYAAACSWKDAA 480

Query: 481 KVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSS 540
           KVRALLKERGLKRTPG SSIEYGNKIH FFVGDRSH ETEKIYSKL+ELL KIRK GYSS
Sbjct: 481 KVRALLKERGLKRTPGWSSIEYGNKIHQFFVGDRSHPETEKIYSKLEELLGKIRKTGYSS 540

Query: 541 KTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLIS 600
           KTEYVLQDVEEE+KEDMINKHSEKLAIAFGLLVSKEG PLIITKNLRICGDCHSTAKLIS
Sbjct: 541 KTEYVLQDVEEEIKEDMINKHSEKLAIAFGLLVSKEGDPLIITKNLRICGDCHSTAKLIS 600

Query: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           LIEKRTIIIRDPKRFHHFS+GFCSC+DYW
Sbjct: 601 LIEKRTIIIRDPKRFHHFSNGFCSCSDYW 627

BLAST of Lcy01g015900 vs. ExPASy TrEMBL
Match: A0A6J1HD36 (pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111462403 PE=3 SV=1)

HSP 1 Score: 1096.3 bits (2834), Expect = 0.0e+00
Identity = 544/628 (86.62%), Postives = 575/628 (91.56%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHPLLLRSFQLIHHCATAEAFVT 60
           MVFL   CSLF FPTKNSI L Q+ SILYNFF QSRTQ+PLLLR F  I  C  AEA V+
Sbjct: 1   MVFLCGFCSLFLFPTKNSIRLCQECSILYNFFNQSRTQYPLLLRPFHPIRQCVAAEALVS 60

Query: 61  SLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDK 120
           +LVIAV SCTSIS+ RGIHARVIKS LYRDGF+GDQLV+CYNK+GYA DAQK+FDDMPD+
Sbjct: 61  ALVIAVKSCTSISSCRGIHARVIKSSLYRDGFIGDQLVSCYNKLGYAVDAQKVFDDMPDR 120

Query: 121 DLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYVHG 180
           DLVSWNSLI GFS  RCL +TLKAF T+KF MSVKPNEVTILSMI ACN ALD G+YVHG
Sbjct: 121 DLVSWNSLICGFS--RCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYVHG 180

Query: 181 FAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQE 240
           FAIK+GVSLEVKV NSLINMYGKSGDL SACRLFEAIP PN +SWNSII A VTN CA E
Sbjct: 181 FAIKIGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAAHVTNDCAGE 240

Query: 241 GIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLD 300
           G+ CFNKMR FGMEPDEGTILA+LQAC HLG+GKLAESIHGLIF  GL A+ITI+TALLD
Sbjct: 241 GVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQITIATALLD 300

Query: 301 LYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVT 360
           LYAKLGRLSAS DVFGEV CADRVAWTAMLAGYAAHGLGREAIKLFESMAE GLEPDHVT
Sbjct: 301 LYAKLGRLSASYDVFGEVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAERGLEPDHVT 360

Query: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNM 420
           FTHLLSACSHSGLVREGK YFN+MSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVI++M
Sbjct: 361 FTHLLSACSHSGLVREGKRYFNLMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRSM 420

Query: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA 480
           PMEPNAGVWGALLGACRVYGNIELGKEVAEHLI+LEPLDPRNYIMLSNMY+A+RSWKDAA
Sbjct: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYAAARSWKDAA 480

Query: 481 KVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSS 540
           KVRALLKERGLKRTPG SSIEYGNKIH FFVGDRSH ETEKIYSKL+ELL KIRK GYSS
Sbjct: 481 KVRALLKERGLKRTPGWSSIEYGNKIHQFFVGDRSHPETEKIYSKLEELLGKIRKTGYSS 540

Query: 541 KTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLIS 600
           KTEYVLQDVEEE+KEDMINKHSEKLAIAFGLLVSKEG PLIITKNLRICGDCHSTAKLIS
Sbjct: 541 KTEYVLQDVEEEIKEDMINKHSEKLAIAFGLLVSKEGDPLIITKNLRICGDCHSTAKLIS 600

Query: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADY 629
           LIEKRT+IIRDPKRFHHFS+GFCSC+DY
Sbjct: 601 LIEKRTLIIRDPKRFHHFSNGFCSCSDY 626

BLAST of Lcy01g015900 vs. NCBI nr
Match: XP_038884769.1 (pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Benincasa hispida])

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 545/629 (86.65%), Postives = 580/629 (92.21%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHPLLLRSFQLIHHCATAEAFVT 60
           MVFLSRCCSLF FP KNS  LH DSSILYNFF QSRTQ+PLLLRSF+L   C TAEA V+
Sbjct: 1   MVFLSRCCSLFLFPFKNSTRLHWDSSILYNFFIQSRTQYPLLLRSFRLTRQCPTAEALVS 60

Query: 61  SLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDK 120
           +L++AVNSCTSISN R IHARVIKS LYR+GF+GDQLVTCYNK+GY EDAQKLFDDMP K
Sbjct: 61  ALLMAVNSCTSISNCRKIHARVIKSFLYREGFIGDQLVTCYNKLGYVEDAQKLFDDMPVK 120

Query: 121 DLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYVHG 180
           DL+SWNSLISGFS   CLD+TL+AFYT+KF  SVKPNE+TILSMI ACN AL AGKY+HG
Sbjct: 121 DLISWNSLISGFS--WCLDITLEAFYTMKFERSVKPNEITILSMISACNGALGAGKYIHG 180

Query: 181 FAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQE 240
           FAIK+GVS EV+V NSLINMYGKS DL SACRLFEAIPDPNT+SWNSII AQVTNGCA+E
Sbjct: 181 FAIKIGVSFEVEVVNSLINMYGKSEDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCARE 240

Query: 241 GIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLD 300
           GIDCFNKMRRFG+EPDEGTILA+LQAC  L +GKLAESIHGLIF  GL A+ITI+TALLD
Sbjct: 241 GIDCFNKMRRFGIEPDEGTILALLQACLQLSVGKLAESIHGLIFCSGLGAKITIATALLD 300

Query: 301 LYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVT 360
           LYAKLGRLSAS DVF EV CADRVAWTAMLAGYAAHGLGREAIKLFESM + GLEPDHVT
Sbjct: 301 LYAKLGRLSASCDVFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMTKKGLEPDHVT 360

Query: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNM 420
           F HLLSACSHSGLVREGKSYF+MMS+VYGIEPR+DHYSCMVDLLGR GLLNDAY+VIQNM
Sbjct: 361 FIHLLSACSHSGLVREGKSYFSMMSKVYGIEPRMDHYSCMVDLLGRRGLLNDAYDVIQNM 420

Query: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA 480
           PMEPNAGVW ALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA
Sbjct: 421 PMEPNAGVWSALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA 480

Query: 481 KVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSS 540
           KVRALLKERGLKRTPGCSSIEY NKIH FFVGDRSH ET KIYSKL+ELL KIR+AGYSS
Sbjct: 481 KVRALLKERGLKRTPGCSSIEYRNKIHRFFVGDRSHSETGKIYSKLEELLGKIRQAGYSS 540

Query: 541 KTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLIS 600
           KTEYVLQ+VEEEVKEDMINKHSEKLAIAFG+LVSKEGAPLIITKN+RICGDCH+TAKLIS
Sbjct: 541 KTEYVLQNVEEEVKEDMINKHSEKLAIAFGILVSKEGAPLIITKNIRICGDCHTTAKLIS 600

Query: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           LIEKRTIIIRDPKRFHHFSDG CSCADYW
Sbjct: 601 LIEKRTIIIRDPKRFHHFSDGLCSCADYW 627

BLAST of Lcy01g015900 vs. NCBI nr
Match: XP_008445305.2 (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g40410, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1103.2 bits (2852), Expect = 0.0e+00
Identity = 550/631 (87.16%), Postives = 578/631 (91.60%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHP--LLLRSFQLIHHCATAEAF 60
           MVF S CCSLF FPTK SI L +DSSILYNFF QSRTQ+P  LLLRSF LI  CA +EA 
Sbjct: 1   MVFSSPCCSLFLFPTKISIPLRRDSSILYNFFIQSRTQYPLLLLLRSFHLIRPCAASEAL 60

Query: 61  VTSLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMP 120
           V+ L+IAV SCTSISN R IHARV KSLLYRDGF+GDQLVTCYNK+GYAEDAQKLFDDMP
Sbjct: 61  VSDLLIAVKSCTSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDAQKLFDDMP 120

Query: 121 DKDLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYV 180
            KDLVSWNSLISGFS  RCL MTL AFYT+KF MS+KPNEVTILSMI ACN ALDAGKY+
Sbjct: 121 HKDLVSWNSLISGFS--RCLHMTLTAFYTMKFEMSIKPNEVTILSMISACNGALDAGKYI 180

Query: 181 HGFAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCA 240
           HGFAIKVG +LEVKVANSLINMYGKSGDL SACRLFEAIPDPNT+SWNSII AQVTNGCA
Sbjct: 181 HGFAIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCA 240

Query: 241 QEGIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTAL 300
           +EGI  FNKMRRFG+E DEGTILA+LQAC HLG+GKLAESIH L+F  G  A+ITI+TAL
Sbjct: 241 REGIXFFNKMRRFGIEQDEGTILALLQACLHLGVGKLAESIHALMFCTGFGAKITIATAL 300

Query: 301 LDLYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDH 360
           LD YAKLGRLSAS DVF EV  ADRVAWTAMLAGYAAHGLGREAIKLFESM   GLEPDH
Sbjct: 301 LDTYAKLGRLSASCDVFREVGFADRVAWTAMLAGYAAHGLGREAIKLFESMVNEGLEPDH 360

Query: 361 VTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQ 420
           VTFTHLLSACSHSGLV EGKSYFN+MSEVYGIEPR+DHYSCMVDLLGRCGLLNDAYEVI+
Sbjct: 361 VTFTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIR 420

Query: 421 NMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKD 480
           NMPMEPNAGVWGALLGACRV+GN+ELGKEVAEHLINLEPLDPRNYIMLSN+YSASRSWKD
Sbjct: 421 NMPMEPNAGVWGALLGACRVHGNVELGKEVAEHLINLEPLDPRNYIMLSNIYSASRSWKD 480

Query: 481 AAKVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGY 540
           AAK+RALLKERGLKRTPGCSSIEYGNK H FFVGDRSH ETEKIYSKL+ELL KI+KAGY
Sbjct: 481 AAKMRALLKERGLKRTPGCSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIKKAGY 540

Query: 541 SSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKL 600
           SSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEG PLIITKNLRICGDCHSTAKL
Sbjct: 541 SSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEPLIITKNLRICGDCHSTAKL 600

Query: 601 ISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           ISLIEKRTIIIRDPKRFHHFSDGFCSCADYW
Sbjct: 601 ISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 629

BLAST of Lcy01g015900 vs. NCBI nr
Match: XP_022144167.1 (pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X1 [Momordica charantia])

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 538/629 (85.53%), Postives = 573/629 (91.10%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHPLLLRSFQLIHHCATAEAFVT 60
           MVFL RCCSLF FPT+  I  +QD S+L+ F T SR  HPLLLRSF  +H   T+EA V+
Sbjct: 1   MVFLPRCCSLFLFPTEFFIRHYQDPSVLFKFLTHSRKHHPLLLRSFHSVHQLETSEALVS 60

Query: 61  SLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDK 120
           +LVIAVNSCTS+SN R IHARVIKS LYRDGF+GDQL  CYN +G AEDAQKLFDDMPDK
Sbjct: 61  ALVIAVNSCTSVSNCRTIHARVIKSFLYRDGFIGDQLAACYNNLGCAEDAQKLFDDMPDK 120

Query: 121 DLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYVHG 180
           DLVSWNSLISGFSRG+CLDMTLKAFY LKF MS+KPNE+TILSMI ACNEALDAGKY+HG
Sbjct: 121 DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHG 180

Query: 181 FAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQE 240
           FA+KVGV LEVKV NSLINMYGK GDL SACRLFEA+P PNTISWNSII AQVTNGCAQ+
Sbjct: 181 FAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQK 240

Query: 241 GIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLD 300
           GIDCFNKMRR G+EPDEGTILAVLQACEHLGIGKLAE IHGLIF +GL  +I+I+TALLD
Sbjct: 241 GIDCFNKMRRLGIEPDEGTILAVLQACEHLGIGKLAEGIHGLIFRNGLGTKISIATALLD 300

Query: 301 LYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVT 360
           L+AKLGRLSAS DVF E+ CADRVAWTAMLAGYAAHGLGREAIKLFESM E GL PDHVT
Sbjct: 301 LFAKLGRLSASCDVFWEMGCADRVAWTAMLAGYAAHGLGREAIKLFESMTENGLVPDHVT 360

Query: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNM 420
           FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPR+DHYSCMVDLLGRCGLLNDAYEVIQNM
Sbjct: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRLDHYSCMVDLLGRCGLLNDAYEVIQNM 420

Query: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA 480
           PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLD RNYIMLSNMYSASRSWKDAA
Sbjct: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDSRNYIMLSNMYSASRSWKDAA 480

Query: 481 KVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSS 540
           KVRALLKERGL+R PG SSIE+ NKIHCF VGD+SH ++EKIYSKL+ELL KIRKAGYS 
Sbjct: 481 KVRALLKERGLRRNPGSSSIEHENKIHCFLVGDQSHPKSEKIYSKLEELLEKIRKAGYSP 540

Query: 541 KTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLIS 600
           +TEYVLQDVEEEVKEDMINKHSEKLAIAFGLLV KEGA LIITKNLRICGDCH+TAKLIS
Sbjct: 541 RTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVCKEGAALIITKNLRICGDCHNTAKLIS 600

Query: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           LIE+RTIIIRDPKRFHHFSDGFCSC DYW
Sbjct: 601 LIERRTIIIRDPKRFHHFSDGFCSCGDYW 629

BLAST of Lcy01g015900 vs. NCBI nr
Match: XP_022144168.1 (pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 1101.7 bits (2848), Expect = 0.0e+00
Identity = 538/629 (85.53%), Postives = 573/629 (91.10%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHPLLLRSFQLIHHCATAEAFVT 60
           MVFL RCCSLF FPT+  I  +QD S+L+ F T SR  HPLLLRSF  +H   T+EA V+
Sbjct: 1   MVFLPRCCSLFLFPTEFFIRHYQDPSVLFKFLTHSRKHHPLLLRSFHSVHQLETSEALVS 60

Query: 61  SLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDK 120
           +LVIAVNSCTS+SN R IHARVIKS LYRDGF+GDQL  CYN +G AEDAQKLFDDMPDK
Sbjct: 61  ALVIAVNSCTSVSNCRTIHARVIKSFLYRDGFIGDQLAACYNNLGCAEDAQKLFDDMPDK 120

Query: 121 DLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYVHG 180
           DLVSWNSLISGFSRG+CLDMTLKAFY LKF MS+KPNE+TILSMI ACNEALDAGKY+HG
Sbjct: 121 DLVSWNSLISGFSRGKCLDMTLKAFYLLKFEMSIKPNEITILSMISACNEALDAGKYIHG 180

Query: 181 FAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQE 240
           FA+KVGV LEVKV NSLINMYGK GDL SACRLFEA+P PNTISWNSII AQVTNGCAQ+
Sbjct: 181 FAVKVGVFLEVKVVNSLINMYGKYGDLQSACRLFEAVPYPNTISWNSIIGAQVTNGCAQK 240

Query: 241 GIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLD 300
           GIDCFNKMRR G+EPDEGTILAVLQACEHLGIGKLAE IHGLIF +GL  +I+I+TALLD
Sbjct: 241 GIDCFNKMRRLGIEPDEGTILAVLQACEHLGIGKLAEGIHGLIFRNGLGTKISIATALLD 300

Query: 301 LYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVT 360
           L+AKLGRLSAS DVF E+ CADRVAWTAMLAGYAAHGLGREAIKLFESM E GL PDHVT
Sbjct: 301 LFAKLGRLSASCDVFWEMGCADRVAWTAMLAGYAAHGLGREAIKLFESMTENGLVPDHVT 360

Query: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNM 420
           FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPR+DHYSCMVDLLGRCGLLNDAYEVIQNM
Sbjct: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRLDHYSCMVDLLGRCGLLNDAYEVIQNM 420

Query: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA 480
           PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLD RNYIMLSNMYSASRSWKDAA
Sbjct: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDSRNYIMLSNMYSASRSWKDAA 480

Query: 481 KVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSS 540
           KVRALLKERGL+R PG SSIE+ NKIHCF VGD+SH ++EKIYSKL+ELL KIRKAGYS 
Sbjct: 481 KVRALLKERGLRRNPGSSSIEHENKIHCFLVGDQSHPKSEKIYSKLEELLEKIRKAGYSP 540

Query: 541 KTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLIS 600
           +TEYVLQDVEEEVKEDMINKHSEKLAIAFGLLV KEGA LIITKNLRICGDCH+TAKLIS
Sbjct: 541 RTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVCKEGAALIITKNLRICGDCHNTAKLIS 600

Query: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           LIE+RTIIIRDPKRFHHFSDGFCSC DYW
Sbjct: 601 LIERRTIIIRDPKRFHHFSDGFCSCGDYW 629

BLAST of Lcy01g015900 vs. NCBI nr
Match: XP_022997515.1 (pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Cucurbita maxima])

HSP 1 Score: 1100.9 bits (2846), Expect = 0.0e+00
Identity = 543/629 (86.33%), Postives = 575/629 (91.41%), Query Frame = 0

Query: 1   MVFLSRCCSLFPFPTKNSICLHQDSSILYNFFTQSRTQHPLLLRSFQLIHHCATAEAFVT 60
           MVFL   CSLF  PTKNS  L Q+ SILYNFF QSRTQ+PLLLR F  I HC  AEA V+
Sbjct: 1   MVFLCGFCSLFLLPTKNSTRLRQECSILYNFFNQSRTQYPLLLRPFHPIRHCVAAEALVS 60

Query: 61  SLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDK 120
           +LVIAV SCTSIS+ RGIHARVIKS LYRDGF+GDQLVTCYNK+GYAEDAQK+FDDMPD+
Sbjct: 61  ALVIAVKSCTSISSCRGIHARVIKSFLYRDGFIGDQLVTCYNKLGYAEDAQKVFDDMPDR 120

Query: 121 DLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDAGKYVHG 180
           DLVSWNSLI GFS  RCL +TLKAF T+KF MSVKPNEVTILSMI ACN ALD G+Y+HG
Sbjct: 121 DLVSWNSLICGFS--RCLHVTLKAFCTMKFEMSVKPNEVTILSMISACNGALDVGRYIHG 180

Query: 181 FAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQE 240
           FAIK+GVSLEVKV NS INMYGKSGDL SACRLFEAIP PN +SWNSII A+VTNGCA E
Sbjct: 181 FAIKIGVSLEVKVVNSFINMYGKSGDLTSACRLFEAIPYPNIVSWNSIIAARVTNGCAGE 240

Query: 241 GIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLD 300
           G+ CFNKMR FGMEPDEGTILA+LQAC HLG+GKLAESIHGLIF  GL A+I I+TALLD
Sbjct: 241 GVHCFNKMRMFGMEPDEGTILALLQACVHLGVGKLAESIHGLIFCSGLGAQIAIATALLD 300

Query: 301 LYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVT 360
           LYAKLGRLSAS DVFGEV CADRVAWTAMLAGYAAHGLGREAIKLFE+MAE GLEPDHVT
Sbjct: 301 LYAKLGRLSASYDVFGEVGCADRVAWTAMLAGYAAHGLGREAIKLFENMAERGLEPDHVT 360

Query: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNM 420
           FTHLLSACSHSGLVREGK YFN+MSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVI++M
Sbjct: 361 FTHLLSACSHSGLVREGKRYFNLMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRSM 420

Query: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAA 480
           PMEPNAGVWGALLGACRVYGNIELGKEVAEHLI+LEPLDPRNYIMLSNMY+A+ SWKDAA
Sbjct: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYAAACSWKDAA 480

Query: 481 KVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSS 540
           KVRALLKERGLKRTPG SSIEYGNKIH FFVGDRSH ETEKIYSKL+ELL KIRK GYSS
Sbjct: 481 KVRALLKERGLKRTPGWSSIEYGNKIHQFFVGDRSHPETEKIYSKLEELLGKIRKTGYSS 540

Query: 541 KTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLIS 600
           KTEYVLQDVEEE+KEDMINKHSEKLAIAFGLLVSKEG PLIITKNLRICGDCHSTAKLIS
Sbjct: 541 KTEYVLQDVEEEIKEDMINKHSEKLAIAFGLLVSKEGDPLIITKNLRICGDCHSTAKLIS 600

Query: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           LIEKRTIIIRDPKRFHHFS+GFCSC+DYW
Sbjct: 601 LIEKRTIIIRDPKRFHHFSNGFCSCSDYW 627

BLAST of Lcy01g015900 vs. TAIR 10
Match: AT5G40410.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 707.2 bits (1824), Expect = 1.2e-203
Identity = 346/581 (59.55%), Postives = 435/581 (74.87%), Query Frame = 0

Query: 56  EAFVTSLVIAVNSCTSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFD 115
           +A V+SL+ AV SC SI   R +H +V+KS+ YR GF+GDQLV CY ++G+   A+KLFD
Sbjct: 31  DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90

Query: 116 DMPDKDLVSWNSLISGFS----RGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILAC--N 175
           +MP++DLVSWNSLISG+S     G+C ++  +   +    +  +PNEVT LSMI AC   
Sbjct: 91  EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS---EVGFRPNEVTFLSMISACVYG 150

Query: 176 EALDAGKYVHGFAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSII 235
            + + G+ +HG  +K GV  EVKV N+ IN YGK+GDL S+C+LFE +   N +SWN++I
Sbjct: 151 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 210

Query: 236 QAQVTNGCAQEGIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLS 295
              + NG A++G+  FN  RR G EPD+ T LAVL++CE +G+ +LA+ IHGLI + G S
Sbjct: 211 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 270

Query: 296 ARITISTALLDLYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESM 355
               I+TALLDLY+KLGRL  S  VF E++  D +AWTAMLA YA HG GR+AIK FE M
Sbjct: 271 GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 330

Query: 356 AEVGLEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGL 415
              G+ PDHVTFTHLL+ACSHSGLV EGK YF  MS+ Y I+PR+DHYSCMVDLLGR GL
Sbjct: 331 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 390

Query: 416 LNDAYEVIQNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNM 475
           L DAY +I+ MPMEP++GVWGALLGACRVY + +LG + AE L  LEP D RNY+MLSN+
Sbjct: 391 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNI 450

Query: 476 YSASRSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKEL 535
           YSAS  WKDA+++R L+K++GL R  GCS IE+GNKIH F VGD SH E+EKI  KLKE+
Sbjct: 451 YSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 510

Query: 536 LRKIR-KAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRI 595
            +K++ + GY SKTE+VL DV E+VKE+MIN+HSEK+A+AFGLLV     P+II KNLRI
Sbjct: 511 RKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRI 570

Query: 596 CGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           CGDCH TAK ISLIEKR IIIRD KRFHHF DG CSC+DYW
Sbjct: 571 CGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608

BLAST of Lcy01g015900 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 481.1 bits (1237), Expect = 1.4e-135
Identity = 233/546 (42.67%), Postives = 349/546 (63.92%), Query Frame = 0

Query: 88  YRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDKDLVSWNSLISGFSRGRCLDMTLKAFYT 147
           +RD      L+  Y   GY E+AQKLFD++P KD+VSWN++ISG++        L+ F  
Sbjct: 197 HRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKD 256

Query: 148 LKFGMSVKPNEVTILSMILACNE--ALDAGKYVHGFAIKVGVSLEVKVANSLINMYGKSG 207
           +    +V+P+E T+++++ AC +  +++ G+ VH +    G    +K+ N+LI++Y K G
Sbjct: 257 M-MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCG 316

Query: 208 DLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQEGIDCFNKMRRFGMEPDEGTILAVLQ 267
           +L +AC LFE +P  + ISWN++I         +E +  F +M R G  P++ T+L++L 
Sbjct: 317 ELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILP 376

Query: 268 ACEHLGIGKLAESIHGLI--FYHGLSARITISTALLDLYAKLGRLSASRDVFGEVSCADR 327
           AC HLG   +   IH  I     G++   ++ T+L+D+YAK G + A+  VF  +     
Sbjct: 377 ACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSL 436

Query: 328 VAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVTFTHLLSACSHSGLVREGKSYFNM 387
            +W AM+ G+A HG    +  LF  M ++G++PD +TF  LLSACSHSG++  G+  F  
Sbjct: 437 SSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRT 496

Query: 388 MSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGVWGALLGACRVYGNIE 447
           M++ Y + P+++HY CM+DLLG  GL  +A E+I  M MEP+  +W +LL AC+++GN+E
Sbjct: 497 MTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVE 556

Query: 448 LGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGCSSIEYG 507
           LG+  AE+LI +EP +P +Y++LSN+Y+++  W + AK RALL ++G+K+ PGCSSIE  
Sbjct: 557 LGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEID 616

Query: 508 NKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSSKTEYVLQDVEEEVKEDMINKHSE 567
           + +H F +GD+ H    +IY  L+E+   + KAG+   T  VLQ++EEE KE  +  HSE
Sbjct: 617 SVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSE 676

Query: 568 KLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFC 627
           KLAIAFGL+ +K G  L I KNLR+C +CH   KLIS I KR II RD  RFHHF DG C
Sbjct: 677 KLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVC 736

Query: 628 SCADYW 630
           SC DYW
Sbjct: 737 SCNDYW 741

BLAST of Lcy01g015900 vs. TAIR 10
Match: AT4G33990.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 458.8 bits (1179), Expect = 7.2e-129
Identity = 230/576 (39.93%), Postives = 356/576 (61.81%), Query Frame = 0

Query: 61  SLVIAVNSCTSISNL-RG--IHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDM 120
           ++V  +++CT   +  RG  IH+  IK  L  + FV ++L+  Y + G   D QK+FD M
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRM 308

Query: 121 PDKDLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSM--ILACNEALDAG 180
             +DL+SWNS+I  +         +  F  ++    ++P+ +T++S+  IL+    + A 
Sbjct: 309 YVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS-RIQPDCLTLISLASILSQLGDIRAC 368

Query: 181 KYVHGFAIKVGVSLE-VKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVT 240
           + V GF ++ G  LE + + N+++ MY K G + SA  +F  +P+ + ISWN+II     
Sbjct: 369 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 428

Query: 241 NGCAQEGIDCFNKMRRFG-MEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARIT 300
           NG A E I+ +N M   G +  ++GT ++VL AC   G  +    +HG +  +GL   + 
Sbjct: 429 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 488

Query: 301 ISTALLDLYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVG 360
           + T+L D+Y K GRL  +  +F ++   + V W  ++A +  HG G +A+ LF+ M + G
Sbjct: 489 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 548

Query: 361 LEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDA 420
           ++PDH+TF  LLSACSHSGLV EG+  F MM   YGI P + HY CMVD+ GR G L  A
Sbjct: 549 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 608

Query: 421 YEVIQNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSAS 480
            + I++M ++P+A +WGALL ACRV+GN++LGK  +EHL  +EP     +++LSNMY+++
Sbjct: 609 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 668

Query: 481 RSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKI 540
             W+   ++R++   +GL++TPG SS+E  NK+  F+ G+++H   E++Y +L  L  K+
Sbjct: 669 GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 728

Query: 541 RKAGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCH 600
           +  GY     +VLQDVE++ KE ++  HSE+LAIAF L+ +     + I KNLR+CGDCH
Sbjct: 729 KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCH 788

Query: 601 STAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
           S  K IS I +R II+RD  RFHHF +G CSC DYW
Sbjct: 789 SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of Lcy01g015900 vs. TAIR 10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 451.4 bits (1160), Expect = 1.2e-126
Identity = 229/574 (39.90%), Postives = 347/574 (60.45%), Query Frame = 0

Query: 59  VTSLVIAVNSC-TSISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDM 118
           +TS++ A +S    +S  + +H   IK     D FV   L+  Y++    ++A+ LF + 
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ER 478

Query: 119 PDKDLVSWNSLISGFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACN--EALDAG 178
            + DLV+WN++++G+++      TLK F  L      + ++ T+ ++   C    A++ G
Sbjct: 479 HNFDLVAWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDFTLATVFKTCGFLFAINQG 538

Query: 179 KYVHGFAIKVGVSLEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTN 238
           K VH +AIK G  L++ V++ +++MY K GD+ +A   F++IP P+ ++W ++I   + N
Sbjct: 539 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIEN 598

Query: 239 GCAQEGIDCFNKMRRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITIS 298
           G  +     F++MR  G+ PDE TI  + +A   L   +    IH        +    + 
Sbjct: 599 GEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVG 658

Query: 299 TALLDLYAKLGRLSASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLE 358
           T+L+D+YAK G +  +  +F  +   +  AW AML G A HG G+E ++LF+ M  +G++
Sbjct: 659 TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 718

Query: 359 PDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYE 418
           PD VTF  +LSACSHSGLV E   +   M   YGI+P I+HYSC+ D LGR GL+  A  
Sbjct: 719 PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAEN 778

Query: 419 VIQNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRS 478
           +I++M ME +A ++  LL ACRV G+ E GK VA  L+ LEPLD   Y++LSNMY+A+  
Sbjct: 779 LIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASK 838

Query: 479 WKDAAKVRALLKERGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRK 538
           W +    R ++K   +K+ PG S IE  NKIH F V DRS+ +TE IY K+K+++R I++
Sbjct: 839 WDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQ 898

Query: 539 AGYSSKTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHST 598
            GY  +T++ L DVEEE KE  +  HSEKLA+AFGLL +    P+ + KNLR+CGDCH+ 
Sbjct: 899 EGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNA 958

Query: 599 AKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 630
            K I+ +  R I++RD  RFH F DG CSC DYW
Sbjct: 959 MKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990

BLAST of Lcy01g015900 vs. TAIR 10
Match: AT5G04780.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 450.7 bits (1158), Expect = 2.0e-126
Identity = 215/561 (38.32%), Postives = 348/561 (62.03%), Query Frame = 0

Query: 71  SISNLRGIHARVIKSLLYRDGFVGDQLVTCYNKMGYAEDAQKLFDDMPDKDLVSWNSLIS 130
           ++   +  H ++I+  L  D  + + L+  Y+K G+ E A+++FD M ++ LVSWN++I 
Sbjct: 76  AVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG 135

Query: 131 GFSRGRCLDMTLKAFYTLKFGMSVKPNEVTILSMILACNEALDA--GKYVHGFAIKVGVS 190
            ++R R     L  F  ++     K +E TI S++ AC    DA   K +H  ++K  + 
Sbjct: 136 LYTRNRMESEALDIFLEMR-NEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCID 195

Query: 191 LEVKVANSLINMYGKSGDLISACRLFEAIPDPNTISWNSIIQAQVTNGCAQEGIDCFNKM 250
           L + V  +L+++Y K G +  A ++FE++ D ++++W+S++   V N   +E +  + + 
Sbjct: 196 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 255

Query: 251 RRFGMEPDEGTILAVLQACEHLGIGKLAESIHGLIFYHGLSARITISTALLDLYAKLGRL 310
           +R  +E ++ T+ +V+ AC +L      + +H +I   G  + + ++++ +D+YAK G L
Sbjct: 256 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 315

Query: 311 SASRDVFGEVSCADRVAWTAMLAGYAAHGLGREAIKLFESMAEVGLEPDHVTFTHLLSAC 370
             S  +F EV   +   W  +++G+A H   +E + LFE M + G+ P+ VTF+ LLS C
Sbjct: 316 RESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 375

Query: 371 SHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIQNMPMEPNAGV 430
            H+GLV EG+ +F +M   YG+ P + HYSCMVD+LGR GLL++AYE+I+++P +P A +
Sbjct: 376 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 435

Query: 431 WGALLGACRVYGNIELGKEVAEHLINLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKE 490
           WG+LL +CRVY N+EL +  AE L  LEP +  N+++LSN+Y+A++ W++ AK R LL++
Sbjct: 436 WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 495

Query: 491 RGLKRTPGCSSIEYGNKIHCFFVGDRSHHETEKIYSKLKELLRKIRKAGYSSKTEYVLQD 550
             +K+  G S I+  +K+H F VG+  H    +I S L  L+ K RK GY    E+ L D
Sbjct: 496 CDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHD 555

Query: 551 VEEEVKEDMINKHSEKLAIAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTII 610
           VE   KE+++ +HSEKLA+ FGL+   E +P+ I KNLRIC DCH   K  S+  +R II
Sbjct: 556 VEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFII 615

Query: 611 IRDPKRFHHFSDGFCSCADYW 630
           +RD  RFHHFSDG CSC D+W
Sbjct: 616 VRDVNRFHHFSDGHCSCGDFW 635

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FND61.6e-20259.55Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidop... [more]
Q9LN011.9e-13442.67Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
O817671.0e-12739.93Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana OX... [more]
Q9SMZ21.6e-12539.90Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... [more]
Q9LZ192.8e-12538.32Pentatricopeptide repeat-containing protein At5g04780, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A1S3BBW70.0e+0087.16LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g40410, mito... [more]
A0A6J1CSK80.0e+0085.53pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X2 ... [more]
A0A6J1CSX20.0e+0085.53pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X1 ... [more]
A0A6J1K9V70.0e+0086.33pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Cucurbit... [more]
A0A6J1HD360.0e+0086.62pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Cucurbit... [more]
Match NameE-valueIdentityDescription
XP_038884769.10.0e+0086.65pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Benincasa ... [more]
XP_008445305.20.0e+0087.16PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g... [more]
XP_022144167.10.0e+0085.53pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X1 ... [more]
XP_022144168.10.0e+0085.53pentatricopeptide repeat-containing protein At5g40410, mitochondrial isoform X2 ... [more]
XP_022997515.10.0e+0086.33pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT5G40410.11.2e-20359.55Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G08070.11.4e-13542.67Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G33990.17.2e-12939.93Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G33170.11.2e-12639.90Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G04780.12.0e-12638.32Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 495..618
e-value: 3.9E-39
score: 133.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 322..369
e-value: 1.1E-11
score: 44.8
coord: 220..267
e-value: 7.6E-8
score: 32.4
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 195..215
e-value: 0.014
score: 15.6
coord: 123..145
e-value: 0.053
score: 13.8
coord: 396..421
e-value: 0.089
score: 13.1
coord: 97..121
e-value: 0.058
score: 13.7
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 223..257
e-value: 1.7E-5
score: 22.7
coord: 359..392
e-value: 4.3E-4
score: 18.3
coord: 324..357
e-value: 6.7E-6
score: 24.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 221..255
score: 10.39137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 322..356
score: 11.728648
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 277..539
e-value: 1.0E-39
score: 138.7
coord: 47..171
e-value: 1.1E-11
score: 46.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 172..276
e-value: 7.2E-18
score: 66.6
NoneNo IPR availablePANTHERPTHR47926:SF123PENTATRICOPEPTIDE (PPR) REPEAT PROTEINcoord: 33..615
NoneNo IPR availablePANTHERPTHR47926PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 33..615

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g015900.1Lcy01g015900.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding