Lcy01g015890 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g015890
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCRAL-TRIO domain-containing protein
LocationChr01: 37459909 .. 37462313 (-)
RNA-Seq ExpressionLcy01g015890
SyntenyLcy01g015890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTAAACACAAAATTGAAAGTTCAATGATCTATTAGACACTTTTTATAGTTTATGGACTAAATTGACACAACTTTAAAAATTCAAAGACTAACTTTTTTTTTTGAAAAAGAACTTCATTAAATCAAACAAAGACAATTACAACAACCTCCTCGTTAATATCGGAGGAGACCCACAAGGGAAAATCAAAATCCCAAAAGACTCAACTCTTTCAAAGTAAAGATTGATTTTGATTACTGTTGATGCTAAATCCGGATAGGGAGAACTCACTTGACCTTCACGTGACACCAACGGTAAATTTTTTTGAAGAGAGAGGAAGATGTGGCTTGCAAGACAAGAAAATCTGCACACTATGGCTTCAATGCTTAAGTCAGCAAGAAGAAAGATGAGAGGCAAACAAAGAGCAAGAGTAAGAGAGGAGAGAGTCTAGAGAATAGAGTTTCGGATCCTTTCTTCAAGGTTGAAGAAGGGTTTATATACCTTCTCATGTGTTTAGGGTTTCTAGGCGTCTGAAGATAGATTTGGATTGAACCAAGTCGAATCGGGTTGGTTGACCAAGGACACTAGGAACCGAGCGGGAGAAGAGAAGTTCGACCCACACAAGTGGGCCGAGGCCGACCATAGCCTCGACCTCGACCTTGGTCGAGGCCGAGCATGGGATTGGGCCTGGCCCAATCCCTTCGGCCTACCTCTCCTCCAGGGTCTGCTTCCTGCGTTTTCGGATTGGTGTTGTGTTGTCCTTGTCAGTTCGTTACATTTTGGAGTTGTCCAAAATTACTTAAAACAATTACAAAAAGACTTATAGCTAGCATCAAATCTAAAATTGACACAACTTTCAATGTTTAAAGACTAACCATTAGGATATATTGTCACTAAATTTTAAATAGAATCATATAACTCTGCCTTTAGCCACTAGAACTTGGTCATATGGGCGATTCTTTTTACCATGCAAAGACAACTCTGTTTCCATCTAATTACTTCACCGATTACACTGCACAAACCAAACAGTAATTCAATCCCAGCTCTTAACAAATCAACCAGAGCAAGAAAGTTAAAAAATAATGTTTACCGACCGCCCCCACGGCCCTTAAAACTTTTACACACGGCTGGGTGGATAAACATCCGACGGTGAGCAGAGCACCTGACTTGTCGGATTAACCCCCACCGAACCCAGTCGAATCAATCCGACCCATAAAAAGGAACATGCTTTCGAATATTCCTCTGCCATTACACCACCGACCCCACCTCTTCTTTCTTCCTTTTAATCCCCCAAAACTTCTGGTATTTGTAACTCTTCACCATGAACTCTTCTTCTTCTTCTCTTTCCGACCAACTTCACCTTCTTGGGAAAGTCGAGGTTTTTAAACTCCATGGTCGTGATAAAGCTGCTCGGAATGTCTTCCTCATTGTCGGAAAATACTTTCCAGGTACTGAAATTACCCCTCTTGTACTTCAAAACAGAGTGTTAATTCATCTCTGTTTTACTTATGGTGGTTGCCCTTTTGGTTTCAGCTCGGTTTGTGAGCAGCCAGGCGGTGAATGTCTATCTGAAGGACAAGATTTTCCCCTTCCTAAAAGATGGGCCGTTCACGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTGCCCTGGAATTTCCAATCTCAAGGCAATCTATGAGGCCATTCCAATCACCATTAAGAACAACATTGAAGCTGTTTATTTTGTCCACCCCGGTTTGCAGGCCCGTCTGTTCTTGGCCACCGTCGGCCGCCTCATGCTCGACGCCGAGTAAGGATTTCTTCCTCCCTTGAATTTGAACTTCCCATTGCAGAAAATGGCAAAAAGGCCAAATCTTTATGGTGGGGTTCTGGTTTTTTTGACTTGCAGGTTGTATAACAAGGTGAAGTATGTGAAAAGAGTGGAGTTTCTGTGGGAGTATGTTAGAAGGAAAGAGATGGAGTTGCCGGAGTTTGTGTATGATCACGATGAGAAATTGGAGTTCTGTCCTGTGATGGACTCTGGTTTGGAGAATGATTTTCTCAGGGTCTTCGCCGCCTCGCCGTCTGTGGATTCTGCGGTTTCTACGTATTCCATGAGATGTTTTGCTTGAGGATGAAGACTCAAAAGATGGGGGCGGGATACAGAGGTCTTTTTGGGTTTTGTTGTAGGAGCTTTTGGGTAGTAGTGGCAGAAAATATTGTAATTATAGACTTTTTTCTGTAGCCAAAGTTGGGAGCTTTATGAGCTTTCCTTGTGAAGAAAGGAACAGTTAATACTTCACAGGAGAAGCAGTGAAAATCTATACATAGGTATAAATGAAGTCCTGATGGTTTTAAATTTTCAACTGTTCATCTGAATAAAATATATGCTCACTCATATCAGATTCCTAAAGATAAGGATGAAGAAATTAAGGGCCCG

mRNA sequence

ATTAAACACAAAATTGAAAGTTCAATGATCTATTAGACACTTTTTATAGTTTATGGACTAAATTGACACAACTTTAAAAATTCAAAGACTAACTTTTTTTTTTGAAAAAGAACTTCATTAAATCAAACAAAGACAATTACAACAACCTCCTCGTTAATATCGGAGGAGACCCACAAGGGAAAATCAAAATCCCAAAAGACTCAACTCTTTCAAAGTAAAGATTGATTTTGATTACTGTTGATGCTAAATCCGGATAGGGAGAACTCACTTGACCTTCACGTGACACCAACGGTAAATTTTTTTGAAGAGAGAGGAAGATGTGGCTTGCAAGACAAGAAAATCTGCACACTATGGCTTCAATGCTTAAGTCAGCAAGAAGAAAGATGAGAGGCAAACAAAGAGCAAGAGTAAGAGAGGAGAGAGTCTAGAGAATAGAGTTTCGGATCCTTTCTTCAAGGTTGAAGAAGGGTTTATATACCTTCTCATGTGTTTAGGGTTTCTAGGCGTCTGAAGATAGATTTGGATTGAACCAAGTCGAATCGGGTTGGTTGACCAAGGACACTAGGAACCGAGCGGGAGAAGAGAAGTTCGACCCACACAAGTGGGCCGAGGCCGACCATAGCCTCGACCTCGACCTTGGTCGAGGCCGAGCATGGGATTGGGCCTGGCCCAATCCCTTCGGCCTACCTCTCCTCCAGGGTCTGCTTCCTGCGTTTTCGGATTGGTGTTGTGTTGTCCTTGTCAGTTCGTTACATTTTGGAGTTGTCCAAAATTACTTAAAACAATTACAAAAAGACTTATAGCTAGCATCAAATCTAAAATTGACACAACTTTCAATGTTTAAAGACTAACCATTAGGATATATTGTCACTAAATTTTAAATAGAATCATATAACTCTGCCTTTAGCCACTAGAACTTGGTCATATGGGCGATTCTTTTTACCATGCAAAGACAACTCTGTTTCCATCTAATTACTTCACCGATTACACTGCACAAACCAAACAGTAATTCAATCCCAGCTCTTAACAAATCAACCAGAGCAAGAAAGTTAAAAAATAATGTTTACCGACCGCCCCCACGGCCCTTAAAACTTTTACACACGGCTGGGTGGATAAACATCCGACGGTGAGCAGAGCACCTGACTTGTCGGATTAACCCCCACCGAACCCAGTCGAATCAATCCGACCCATAAAAAGGAACATGCTTTCGAATATTCCTCTGCCATTACACCACCGACCCCACCTCTTCTTTCTTCCTTTTAATCCCCCAAAACTTCTGGTATTTGTAACTCTTCACCATGAACTCTTCTTCTTCTTCTCTTTCCGACCAACTTCACCTTCTTGGGAAAGTCGAGGTTTTTAAACTCCATGGTCGTGATAAAGCTGCTCGGAATGTCTTCCTCATTGTCGGAAAATACTTTCCAGCTCGGTTTGTGAGCAGCCAGGCGGTGAATGTCTATCTGAAGGACAAGATTTTCCCCTTCCTAAAAGATGGGCCGTTCACGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTGCCCTGGAATTTCCAATCTCAAGGCAATCTATGAGGCCATTCCAATCACCATTAAGAACAACATTGAAGCTGTTTATTTTGTCCACCCCGGTTTGCAGGCCCGTCTGTTCTTGGCCACCGTCGGCCGCCTCATGCTCGACGCCGAGTTGTATAACAAGGTGAAGTATGTGAAAAGAGTGGAGTTTCTGTGGGAGTATGTTAGAAGGAAAGAGATGGAGTTGCCGGAGTTTGTGTATGATCACGATGAGAAATTGGAGTTCTGTCCTGTGATGGACTCTGGTTTGGAGAATGATTTTCTCAGGGTCTTCGCCGCCTCGCCGTCTGTGGATTCTGCGGTTTCTACGTATTCCATGAGATGTTTTGCTTGAGGATGAAGACTCAAAAGATGGGGGCGGGATACAGAGGTCTTTTTGGGTTTTGTTGTAGGAGCTTTTGGGTAGTAGTGGCAGAAAATATTGTAATTATAGACTTTTTTCTGTAGCCAAAGTTGGGAGCTTTATGAGCTTTCCTTGTGAAGAAAGGAACAGTTAATACTTCACAGGAGAAGCAGTGAAAATCTATACATAGGTATAAATGAAGTCCTGATGGTTTTAAATTTTCAACTGTTCATCTGAATAAAATATATGCTCACTCATATCAGATTCCTAAAGATAAGGATGAAGAAATTAAGGGCCCG

Coding sequence (CDS)

ATGAACTCTTCTTCTTCTTCTCTTTCCGACCAACTTCACCTTCTTGGGAAAGTCGAGGTTTTTAAACTCCATGGTCGTGATAAAGCTGCTCGGAATGTCTTCCTCATTGTCGGAAAATACTTTCCAGCTCGGTTTGTGAGCAGCCAGGCGGTGAATGTCTATCTGAAGGACAAGATTTTCCCCTTCCTAAAAGATGGGCCGTTCACGGTGGTGTACATTCACACAGACGTTCATTGGACAGAGAATTGCCCTGGAATTTCCAATCTCAAGGCAATCTATGAGGCCATTCCAATCACCATTAAGAACAACATTGAAGCTGTTTATTTTGTCCACCCCGGTTTGCAGGCCCGTCTGTTCTTGGCCACCGTCGGCCGCCTCATGCTCGACGCCGAGTTGTATAACAAGGTGAAGTATGTGAAAAGAGTGGAGTTTCTGTGGGAGTATGTTAGAAGGAAAGAGATGGAGTTGCCGGAGTTTGTGTATGATCACGATGAGAAATTGGAGTTCTGTCCTGTGATGGACTCTGGTTTGGAGAATGATTTTCTCAGGGTCTTCGCCGCCTCGCCGTCTGTGGATTCTGCGGTTTCTACGTATTCCATGAGATGTTTTGCTTGA

Protein sequence

MNSSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFPFLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLATVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLENDFLRVFAASPSVDSAVSTYSMRCFA
Homology
BLAST of Lcy01g015890 vs. ExPASy Swiss-Prot
Match: A7T167 (Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-08
Identity = 41/147 (27.89%), Postives = 77/147 (52.38%), Query Frame = 0

Query: 25  GRDKAARNVFLIVGKYFPARFVS-SQAVNVYLKDKIFPFLKDGPFTVVYIHTDVHWT-EN 84
           G D   R V + V ++F A+     +AV  ++   +   + +  + VVY HT  H T EN
Sbjct: 346 GVDFLGRPVVVFVARHFTAQNTDLGKAVAYFI--SVLDRIVNRDYVVVYFHT--HSTEEN 405

Query: 85  CPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARL---FLATVGRLMLDAELYNKVKYV 144
            P +S LK +Y  +    + N++A Y VHP + AR+   F  T       + +  KV ++
Sbjct: 406 QPPMSFLKELYHIVDNKYRRNLKAFYIVHPTVWARIVTWFFTT----FTASSVKEKVHFL 465

Query: 145 KRVEFLWEYVRRKEMELPEFVYDHDEK 167
             V++L++++   ++++P +V ++D K
Sbjct: 466 SGVQYLYDWINPDQLDIPAYVLEYDMK 484

BLAST of Lcy01g015890 vs. ExPASy TrEMBL
Match: A0A5A7VHB1 (Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001720 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.2e-102
Identity = 185/204 (90.69%), Postives = 194/204 (95.10%), Query Frame = 0

Query: 1   MNSSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIF 60
           MN SSSSLSDQLHLLGKVEVF+LHGRDKA RNV LIVGKYFPARFVSSQAVNVYLKDKIF
Sbjct: 1   MNYSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIF 60

Query: 61  PFLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFL 120
           P LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYF+HP LQ R+F 
Sbjct: 61  PLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFF 120

Query: 121 ATVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLEND 180
           ATVGRLMLDAELYNKVKYVKRVEFLWE+VRRKEMELP+FVYDHDEKLEFCPVMDS LEND
Sbjct: 121 ATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLEND 180

Query: 181 FLRVFAASPSVDSAVSTYSMRCFA 205
           +LRVF+ SPS++S VSTYSMRCFA
Sbjct: 181 YLRVFSPSPSLNSGVSTYSMRCFA 204

BLAST of Lcy01g015890 vs. ExPASy TrEMBL
Match: A0A1S4DW79 (ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC107990288 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.4e-102
Identity = 184/202 (91.09%), Postives = 193/202 (95.54%), Query Frame = 0

Query: 3   SSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFPF 62
           SSSSSLSDQLHLLGKVEVF+LHGRDKA RNV LIVGKYFPARFVSSQAVNVYLKDKIFP 
Sbjct: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63

Query: 63  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLAT 122
           LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYF+HP LQ R+F AT
Sbjct: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123

Query: 123 VGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLENDFL 182
           VGRLMLDAELYNKVKYVKRVEFLWE+VRRKEMELP+FVYDHDEKLEFCPVMDS LEND+L
Sbjct: 124 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYL 183

Query: 183 RVFAASPSVDSAVSTYSMRCFA 205
           RVF+ SPS++S VSTYSMRCFA
Sbjct: 184 RVFSPSPSLNSGVSTYSMRCFA 205

BLAST of Lcy01g015890 vs. ExPASy TrEMBL
Match: A0A0A0LML6 (CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 8.8e-100
Identity = 181/203 (89.16%), Postives = 193/203 (95.07%), Query Frame = 0

Query: 2   NSSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFP 61
           +SSSSSLSDQLHLLGKVEVF+LHGRDKA RNV LIVGKYFPARFVSSQAVNVYLKDKIFP
Sbjct: 4   SSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFP 63

Query: 62  FLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLA 121
            LKDGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIKNNIEAVYF+HP LQ R+F A
Sbjct: 64  LLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFA 123

Query: 122 TVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLENDF 181
           TVGRLMLDAELYNKVKYVKRVEFLWE+VRRKEM+LP+FVYDHDEKLEFCPVM+S LEND+
Sbjct: 124 TVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDY 183

Query: 182 LRVFAASPSVDSAVSTYSMRCFA 205
           LRVF+ SPS++S VSTYSMRCFA
Sbjct: 184 LRVFSPSPSLNSGVSTYSMRCFA 206

BLAST of Lcy01g015890 vs. ExPASy TrEMBL
Match: A0A6J1KC43 (protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 8.2e-98
Identity = 179/203 (88.18%), Postives = 193/203 (95.07%), Query Frame = 0

Query: 3   SSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFPF 62
           S SSSLSDQLHLLGK EVFKLHGRD+A RNVFLIVGK+FPARFVS+QAVN+YLKDKIFPF
Sbjct: 4   SVSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIFPF 63

Query: 63  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLAT 122
           +KDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP  IKNN++AVYFVHPGLQARLF AT
Sbjct: 64  VKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTNIKNNLKAVYFVHPGLQARLFFAT 123

Query: 123 VGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLENDFL 182
           VGRL+L AELYNKVKYVKRVEFLWEYVRRKE+ELPEFVYDHDEKLEFCPVMDSGLE+D+L
Sbjct: 124 VGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPVMDSGLESDYL 183

Query: 183 RVFAASPSVDSAVSTY-SMRCFA 205
           R+F+ASPSVDSAVSTY SMRCFA
Sbjct: 184 RLFSASPSVDSAVSTYSSMRCFA 206

BLAST of Lcy01g015890 vs. ExPASy TrEMBL
Match: A0A6J1CST5 (uncharacterized protein LOC111013979 OS=Momordica charantia OX=3673 GN=LOC111013979 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 2.2e-90
Identity = 169/208 (81.25%), Postives = 185/208 (88.94%), Query Frame = 0

Query: 1   MNSSSS----SLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLK 60
           MNSSSS    SL DQLHLL KVEVF LHGRDKA RNV LIVGKYFPARFVSS+AV+ YLK
Sbjct: 1   MNSSSSISSLSLPDQLHLLRKVEVFNLHGRDKAGRNVLLIVGKYFPARFVSSEAVSFYLK 60

Query: 61  DKIFPFLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQA 120
           DKIFP LK+GPFTVVY+HTDVHWTEN PG+S LKAI +AIPIT+KN+IEAVYFVHPGLQ+
Sbjct: 61  DKIFPALKEGPFTVVYVHTDVHWTENFPGVSYLKAICDAIPITVKNSIEAVYFVHPGLQS 120

Query: 121 RLFLATVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSG 180
           RLF ATVGR ML A LYNK+KYVKRVEFLWEYVRRKEMELP+FVYDHD+KLEFCPV+ S 
Sbjct: 121 RLFFATVGRFMLGAGLYNKLKYVKRVEFLWEYVRRKEMELPKFVYDHDQKLEFCPVVYSS 180

Query: 181 LENDFLRVFAASPSVDSAVSTYSMRCFA 205
           LEND+LRVF+A PS+DS V TYSMRCFA
Sbjct: 181 LENDYLRVFSAVPSLDSPVPTYSMRCFA 208

BLAST of Lcy01g015890 vs. NCBI nr
Match: KAA0064859.1 (ganglioside-induced differentiation-associated protein 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 380.9 bits (977), Expect = 6.7e-102
Identity = 185/204 (90.69%), Postives = 194/204 (95.10%), Query Frame = 0

Query: 1   MNSSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIF 60
           MN SSSSLSDQLHLLGKVEVF+LHGRDKA RNV LIVGKYFPARFVSSQAVNVYLKDKIF
Sbjct: 1   MNYSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIF 60

Query: 61  PFLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFL 120
           P LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYF+HP LQ R+F 
Sbjct: 61  PLLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFF 120

Query: 121 ATVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLEND 180
           ATVGRLMLDAELYNKVKYVKRVEFLWE+VRRKEMELP+FVYDHDEKLEFCPVMDS LEND
Sbjct: 121 ATVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLEND 180

Query: 181 FLRVFAASPSVDSAVSTYSMRCFA 205
           +LRVF+ SPS++S VSTYSMRCFA
Sbjct: 181 YLRVFSPSPSLNSGVSTYSMRCFA 204

BLAST of Lcy01g015890 vs. NCBI nr
Match: XP_016899965.1 (PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 1.9e-101
Identity = 184/202 (91.09%), Postives = 193/202 (95.54%), Query Frame = 0

Query: 3   SSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFPF 62
           SSSSSLSDQLHLLGKVEVF+LHGRDKA RNV LIVGKYFPARFVSSQAVNVYLKDKIFP 
Sbjct: 4   SSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPL 63

Query: 63  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLAT 122
           LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYF+HP LQ R+F AT
Sbjct: 64  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFAT 123

Query: 123 VGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLENDFL 182
           VGRLMLDAELYNKVKYVKRVEFLWE+VRRKEMELP+FVYDHDEKLEFCPVMDS LEND+L
Sbjct: 124 VGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMELPKFVYDHDEKLEFCPVMDSDLENDYL 183

Query: 183 RVFAASPSVDSAVSTYSMRCFA 205
           RVF+ SPS++S VSTYSMRCFA
Sbjct: 184 RVFSPSPSLNSGVSTYSMRCFA 205

BLAST of Lcy01g015890 vs. NCBI nr
Match: XP_038884815.1 (ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida])

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99
Identity = 185/203 (91.13%), Postives = 192/203 (94.58%), Query Frame = 0

Query: 3   SSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFPF 62
           SSS  LSDQLHLL KVEVFKLHGRDKA RNV LIVGKYFPARFVSSQAVNVYLKDKIFPF
Sbjct: 4   SSSPPLSDQLHLLEKVEVFKLHGRDKARRNVLLIVGKYFPARFVSSQAVNVYLKDKIFPF 63

Query: 63  LK-DGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLA 122
           LK DGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIK NIEAVYF+HPGLQAR+F A
Sbjct: 64  LKDDGPFTVVYIHTDVHWTENFPGISNLKAIYEAIPITIKKNIEAVYFLHPGLQARMFFA 123

Query: 123 TVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLENDF 182
           TVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELP+FVYDHDEKLEFCPVMDS LEND+
Sbjct: 124 TVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPQFVYDHDEKLEFCPVMDSDLENDY 183

Query: 183 LRVFAASPSVDSAVSTYSMRCFA 205
           LR+F+ SPSVD+AVSTYSMRCFA
Sbjct: 184 LRLFSPSPSVDAAVSTYSMRCFA 206

BLAST of Lcy01g015890 vs. NCBI nr
Match: XP_031737047.1 (ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus] >KGN62279.1 hypothetical protein Csa_018770 [Cucumis sativus])

HSP 1 Score: 372.9 bits (956), Expect = 1.8e-99
Identity = 181/203 (89.16%), Postives = 193/203 (95.07%), Query Frame = 0

Query: 2   NSSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFP 61
           +SSSSSLSDQLHLLGKVEVF+LHGRDKA RNV LIVGKYFPARFVSSQAVNVYLKDKIFP
Sbjct: 4   SSSSSSLSDQLHLLGKVEVFRLHGRDKAGRNVLLIVGKYFPARFVSSQAVNVYLKDKIFP 63

Query: 62  FLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLA 121
            LKDGPFTVVYIHTDVHWTEN PGISNLKAIYEAIPITIKNNIEAVYF+HP LQ R+F A
Sbjct: 64  LLKDGPFTVVYIHTDVHWTENLPGISNLKAIYEAIPITIKNNIEAVYFLHPSLQTRVFFA 123

Query: 122 TVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLENDF 181
           TVGRLMLDAELYNKVKYVKRVEFLWE+VRRKEM+LP+FVYDHDEKLEFCPVM+S LEND+
Sbjct: 124 TVGRLMLDAELYNKVKYVKRVEFLWEHVRRKEMDLPKFVYDHDEKLEFCPVMESDLENDY 183

Query: 182 LRVFAASPSVDSAVSTYSMRCFA 205
           LRVF+ SPS++S VSTYSMRCFA
Sbjct: 184 LRVFSPSPSLNSGVSTYSMRCFA 206

BLAST of Lcy01g015890 vs. NCBI nr
Match: XP_023546880.1 (protein GDAP2 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.2 bits (949), Expect = 1.2e-98
Identity = 181/205 (88.29%), Postives = 196/205 (95.61%), Query Frame = 0

Query: 1   MNSSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIF 60
           ++SSSSSLSDQLHLLGK EVFKLHGRD+A RNVFLIVGK+FPARFVS+QAVN+YLKDKIF
Sbjct: 5   VSSSSSSLSDQLHLLGKAEVFKLHGRDRAGRNVFLIVGKHFPARFVSTQAVNLYLKDKIF 64

Query: 61  PFLKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFL 120
           PFLKDGPFT+VYIHTDVHWTEN PGISNLKAIYE IP TIKNN++AVYFVHPGLQARLF 
Sbjct: 65  PFLKDGPFTLVYIHTDVHWTENFPGISNLKAIYEFIPTTIKNNLKAVYFVHPGLQARLFF 124

Query: 121 ATVGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLEND 180
           ATVGRL+L AELYNKVKYVKRVEFLWEYVRRKE+ELPEFVYDHDEKLEFCP+MDSGLE+D
Sbjct: 125 ATVGRLILGAELYNKVKYVKRVEFLWEYVRRKEIELPEFVYDHDEKLEFCPMMDSGLESD 184

Query: 181 FLRVFAASPSVDSAVSTY-SMRCFA 205
           +LR+F ASPSVDSAVSTY SMRCFA
Sbjct: 185 YLRLFPASPSVDSAVSTYSSMRCFA 209

BLAST of Lcy01g015890 vs. TAIR 10
Match: AT4G35750.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 239.6 bits (610), Expect = 2.2e-63
Identity = 111/202 (54.95%), Postives = 155/202 (76.73%), Query Frame = 0

Query: 3   SSSSSLSDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFPF 62
           SS  S  +Q  L+ K+E+FK+HGRDK  R +  I+GK+FPARF+S   +  YL++KIFP 
Sbjct: 2   SSQISEIEQEQLIEKLEIFKIHGRDKRGRKILRIIGKFFPARFLSLDVLKKYLEEKIFPR 61

Query: 63  LKDGPFTVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLAT 122
           L   PF V+Y+HT V  +EN PGIS L+AIY+AIP+ +++N++ VYF+HPGLQ+RLFLAT
Sbjct: 62  LGRKPFAVLYVHTGVQRSENFPGISALRAIYDAIPVNVRDNLQEVYFLHPGLQSRLFLAT 121

Query: 123 VGRLMLDAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLENDFL 182
            GR +    LY K++Y+ RV++LWE+VRR E+E+PEFVYDHD+ LE+ P+MD G E+D  
Sbjct: 122 CGRFLFSGGLYGKLRYISRVDYLWEHVRRNEIEMPEFVYDHDDDLEYRPMMDYGQESDHA 181

Query: 183 RVFAASPSVDSAVSTYSMRCFA 205
           RVFA + +VDS+VS++SMRC +
Sbjct: 182 RVFAGA-AVDSSVSSFSMRCIS 202

BLAST of Lcy01g015890 vs. TAIR 10
Match: AT3G10210.1 (SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein )

HSP 1 Score: 165.2 bits (417), Expect = 5.4e-41
Identity = 76/166 (45.78%), Postives = 115/166 (69.28%), Query Frame = 0

Query: 15  LGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFPFLKDGPFTVVYIH 74
           L  ++ F L G D++   +F IVGKYFPAR VS++ +  Y+  KI     +GP  +VY+H
Sbjct: 49  LDLLQFFTLQGLDRSGNRIFRIVGKYFPARVVSAERLKKYISQKISNQCPEGPLCLVYMH 108

Query: 75  TDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLATVGRLMLDAELYN 134
           + V   +N PGI+ L+ IYE +P  IK+ ++ VYF+HPGL++RL +AT+GRL+L   LY 
Sbjct: 109 STVQKDDNSPGITILRWIYEDLPSDIKDRLQLVYFIHPGLRSRLVIATLGRLLLSGGLYW 168

Query: 135 KVKYVKRVEFLWEYVRRKEMELPEFVYDHDEKLEFCPVMDSGLEND 181
           K+KYV R+++LWE +++ E+E+P+FV +HD  LE  P+ D G+E D
Sbjct: 169 KIKYVSRLQYLWEDIKKGEVEIPDFVKNHDNVLEHRPLTDYGIEPD 214

BLAST of Lcy01g015890 vs. TAIR 10
Match: AT1G69340.1 (appr-1-p processing enzyme family protein )

HSP 1 Score: 65.1 bits (157), Expect = 7.6e-11
Identity = 37/156 (23.72%), Postives = 83/156 (53.21%), Query Frame = 0

Query: 9   SDQLHLLGKVEVFKLHGRDKAARNVFLIVGKYFPARFVSSQAVNVYLKDKIFPFLKDGPF 68
           S  L  + ++++    G D     V ++VG +F  R +  +   +Y+  +  P ++  P+
Sbjct: 388 SINLSEIAEMKIVYRGGVDTEGHPVMVVVGAHFLLRCLDLERFVLYVIKEFEPVIQK-PY 447

Query: 69  TVVYIHTDVHWTENCPGISNLKAIYEAIPITIKNNIEAVYFVHPGLQARLFLATVGRLML 128
           ++VY H+     +  P +  +K + + +    + N++A+Y +HP    +  + T+ +  +
Sbjct: 448 SIVYFHSAAS-LQVQPDLGWMKRLEQILGRKHQRNLQAIYVLHPTFHLKATILTM-QFFV 507

Query: 129 DAELYNKVKYVKRVEFLWEYVRRKEMELPEFVYDHD 165
           D  ++ KV Y  R+  L++YV R+++ +P+FV+ HD
Sbjct: 508 DNVVWKKVVYADRLLQLFKYVPREQLTIPDFVFQHD 540

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A7T1674.5e-0827.89Protein GDAP2 homolog OS=Nematostella vectensis OX=45351 GN=gdap2 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A5A7VHB13.2e-10290.69Ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo va... [more]
A0A1S4DW799.4e-10291.09ganglioside-induced differentiation-associated protein 2-like OS=Cucumis melo OX... [more]
A0A0A0LML68.8e-10089.16CRAL-TRIO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G348170 P... [more]
A0A6J1KC438.2e-9888.18protein GDAP2 homolog OS=Cucurbita maxima OX=3661 GN=LOC111491951 PE=4 SV=1[more]
A0A6J1CST52.2e-9081.25uncharacterized protein LOC111013979 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
Match NameE-valueIdentityDescription
KAA0064859.16.7e-10290.69ganglioside-induced differentiation-associated protein 2-like [Cucumis melo var.... [more]
XP_016899965.11.9e-10191.09PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Cucumi... [more]
XP_038884815.11.4e-9991.13ganglioside-induced differentiation-associated protein 2-like [Benincasa hispida... [more]
XP_031737047.11.8e-9989.16ganglioside-induced differentiation-associated-protein 2-like [Cucumis sativus] ... [more]
XP_023546880.11.2e-9888.29protein GDAP2 homolog [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT4G35750.12.2e-6354.95SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein... [more]
AT3G10210.15.4e-4145.78SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein... [more]
AT1G69340.17.6e-1123.72appr-1-p processing enzyme family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 14..163
e-value: 1.4E-4
score: 31.2
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 31..165
e-value: 7.5E-27
score: 94.3
IPR036865CRAL-TRIO lipid binding domain superfamilyGENE3D3.40.525.10coord: 15..167
e-value: 5.7E-23
score: 83.2
NoneNo IPR availablePANTHERPTHR11106GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATEDcoord: 4..204
NoneNo IPR availablePANTHERPTHR11106:SF101PROTEIN, PUTATIVE-RELATEDcoord: 4..204

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g015890.1Lcy01g015890.1mRNA