Lcy01g015480 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g015480
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Poly(A)-specific ribonuclease
Location	Chr01: 37001350 .. 37002932 (-)
RNA-Seq Expression	Lcy01g015480
Synteny	Lcy01g015480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAATGTTTTAGGGAAGAGTCTTAAGCCCAAGCCGAGCTCTCAAACAAACCCTCTCTGTTTGTGTTCTTCTCCGCCTCTCCTTCGTTGACCTACACGCTTCTCTTCTCTTCTCTTCTCTTCTAAACCAAGCTCAAAATCTTCAACTCCCTTCTTCTAGATCTGTGATTCCAAGCCTTCAATTTCGATTTTTCAAGGTCAGATCTGTTAACCCACTTCATTTTCTTTGCTTGAATCACTTCGTTTCTAGGGTTCTATCCACACCCTTCACTTCCTCTGCTTAAAGCTCTCTCTTGCTTCCGTTTCTTTCAGATCTATCAAGATTCGGCTAAGTTTCTTACTCCGCCGCTGGTTTTCCGACGCCCCCTCTTCTAGTTCTGAGATCTCGGCCTCTGTTCGCGATCTTTTTTCACTTAGGGTTCTTCCTGTTCGTCGTTTTGTCGTCTTGGTCGAGTTTACGTTGGAGGGATGTCGATTTTACCGAAGGGCGATTCGATTCAAATCCGTGAGGTGTGGAACGCGAATTTGGAGGAGGAGTTTGCGCTTATCCGGGAAATTGTTGATGAATTTAATTACATAGCGATGGATACCGAGTTCCCCGGAGTGGTGCTTCGTCCGCTTGGTGCTTTTAAGAATATCAACGATTACAACTACCAGACTCTCAAAGATAATGTTGATATGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGATGAGAAGGGAAATCTCCCGACTTGTGGAACGGATAAGTTTTTTATTTGGCAGTTTAATTTCCGCGAGTTCAACATTAGTGAAGATGTTTTTGCCAGTGATTCGATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTAAACGATGGTGTTAACTGGGTGACATTCCACAGTGGATATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAAGCTTACCAGAATCGCAGGCGGGATTTTTTGATTTGATCAACATCTATTTTCCTGTGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGATTGAACAAGCTTGCGGAGTTATTAGATGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACTTTTTTCAATGGATCTACACAGAAATACGCAGGTGTTTTGTATGGTCTCGGTGTTGAAAATGGACAGCGTACTAATTGAAGAGAATTACCCAAGTATTTGTAGAAGTGTGAGACTTTTAGTTACTTTTGTACAATTTGGCTAAAGCATTGATGATTGTAACTGTTTTCCGCTTTCCTGCTCTGTAATAGAAACCTCCGACTGTTTTTCGCAGCTTGTGGTTTCTTGTAAATTATGGCAGTTAGTGTTTCAATAAAAATCTTAATGACGTTTCTTTGAACTGGGTTTCACTTGTTTTGTGAGCTTATGCTGCTTACATATTCCTTTCGGTTTATTAAAAATGTAAGGCTCCAAAGGTACTTGGATTGATACA

mRNA sequence

GCAATGTTTTAGGGAAGAGTCTTAAGCCCAAGCCGAGCTCTCAAACAAACCCTCTCTGTTTGTGTTCTTCTCCGCCTCTCCTTCGTTGACCTACACGCTTCTCTTCTCTTCTCTTCTCTTCTAAACCAAGCTCAAAATCTTCAACTCCCTTCTTCTAGATCTGTGATTCCAAGCCTTCAATTTCGATTTTTCAAGGTCAGATCTGTTAACCCACTTCATTTTCTTTGCTTGAATCACTTCGTTTCTAGGGTTCTATCCACACCCTTCACTTCCTCTGCTTAAAGCTCTCTCTTGCTTCCGTTTCTTTCAGATCTATCAAGATTCGGCTAAGTTTCTTACTCCGCCGCTGGTTTTCCGACGCCCCCTCTTCTAGTTCTGAGATCTCGGCCTCTGTTCGCGATCTTTTTTCACTTAGGGTTCTTCCTGTTCGTCGTTTTGTCGTCTTGGTCGAGTTTACGTTGGAGGGATGTCGATTTTACCGAAGGGCGATTCGATTCAAATCCGTGAGGTGTGGAACGCGAATTTGGAGGAGGAGTTTGCGCTTATCCGGGAAATTGTTGATGAATTTAATTACATAGCGATGGATACCGAGTTCCCCGGAGTGGTGCTTCGTCCGCTTGGTGCTTTTAAGAATATCAACGATTACAACTACCAGACTCTCAAAGATAATGTTGATATGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGATGAGAAGGGAAATCTCCCGACTTGTGGAACGGATAAGTTTTTTATTTGGCAGTTTAATTTCCGCGAGTTCAACATTAGTGAAGATGTTTTTGCCAGTGATTCGATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTAAACGATGGTGTTAACTGGGTGACATTCCACAGTGGATATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAAGCTTACCAGAATCGCAGGCGGGATTTTTTGATTTGATCAACATCTATTTTCCTGTGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGATTGAACAAGCTTGCGGAGTTATTAGATGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACTTTTTTCAATGGATCTACACAGAAATACGCAGGTGTTTTGTATGGTCTCGGTGTTGAAAATGGACAGCGTACTAATTGAAGAGAATTACCCAAGTATTTGTAGAAGTGTGAGACTTTTAGTTACTTTTGTACAATTTGGCTAAAGCATTGATGATTGTAACTGTTTTCCGCTTTCCTGCTCTGTAATAGAAACCTCCGACTGTTTTTCGCAGCTTGTGGTTTCTTGTAAATTATGGCAGTTAGTGTTTCAATAAAAATCTTAATGACGTTTCTTTGAACTGGGTTTCACTTGTTTTGTGAGCTTATGCTGCTTACATATTCCTTTCGGTTTATTAAAAATGTAAGGCTCCAAAGGTACTTGGATTGATACA

Coding sequence (CDS)

ATGTCGATTTTACCGAAGGGCGATTCGATTCAAATCCGTGAGGTGTGGAACGCGAATTTGGAGGAGGAGTTTGCGCTTATCCGGGAAATTGTTGATGAATTTAATTACATAGCGATGGATACCGAGTTCCCCGGAGTGGTGCTTCGTCCGCTTGGTGCTTTTAAGAATATCAACGATTACAACTACCAGACTCTCAAAGATAATGTTGATATGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGATGAGAAGGGAAATCTCCCGACTTGTGGAACGGATAAGTTTTTTATTTGGCAGTTTAATTTCCGCGAGTTCAACATTAGTGAAGATGTTTTTGCCAGTGATTCGATTGAGCTTCTGCGCCAGTGTGGTATTGATTTTAAGAAGAACAATGAAGAGGGTATCGATGTCAATCGATTTGGTGAGCTTCTAATGTCTTCTGGGGTTGTGTTAAACGATGGTGTTAACTGGGTGACATTCCACAGTGGATATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAAGCTTACCAGAATCGCAGGCGGGATTTTTTGATTTGATCAACATCTATTTTCCTGTGGTTTATGATATCAAGCATTTGATGAAGTTTTGCAACAGTCTCCATGGTGGATTGAACAAGCTTGCGGAGTTATTAGATGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTTACTGCCTGTACTTTTAGGAAGTTAAGGGATACTTTTTTCAATGGATCTACACAGAAATACGCAGGTGTTTTGTATGGTCTCGGTGTTGAAAATGGACAGCGTACTAATTGA

Protein sequence

MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIELLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN

Homology

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BLAST of Lcy01g015480 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 450.3 bits (1157), Expect = 1.6e-125
Identity = 207/272 (76.10%), Postives = 243/272 (89.34%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIWQFNFREFNISEDVFASDSIE 120
           +Y+TLK NV++LK+IQLGLTFSDEKGNLPTCGTD K+ IWQFNFREF++  D++A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLT 240
           PE+Q GFF++I++YFP VYDIKHLMKFCNSLHGGLNKLAELLDVER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS +KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of Lcy01g015480 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 5.6e-123
Identity = 201/271 (74.17%), Postives = 238/271 (87.82%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           +Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQFNFREF++  D+FA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           +SQ  FF LIN+YFP VYDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVENGQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Lcy01g015480 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 4.8e-122
Identity = 203/268 (75.75%), Postives = 234/268 (87.31%), Query Frame = 0


Query: 6   KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTL 65
           K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIELLRQCG 125
           K+NVD+LKLIQ+GLTFSDE GNLPTCGTDKF IWQFNFREFNI ED++AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAG 185
           IDFKKN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRK 245
           FF L+ +YFP VYDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVENGQRT 274
           L++ +F GST+KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]

BLAST of Lcy01g015480 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 8.2e-98
Identity = 171/264 (64.77%), Postives = 208/264 (78.79%), Query Frame = 0


Query: 8   DSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYN 67
           D+I+IREVWN NLE+E ALI + +D+F Y+AMDTEFPG+V + + A  N N      +YN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIELL 127
           Y TLK NV+MLKLIQLGLT SDEKGNLPTCGT+K  IWQFNFREFN+  D+FA DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPE 187
           R+  ID +KNNE G+D  RF ELLM SGVVLND ++WVTFH GYDFGYLLKLL+ + LPE
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 SQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTAC 247
             + FFD +  +FPVVYDIK+LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSTQKYAGVLYGL 266
           TF K+++ FF GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]

BLAST of Lcy01g015480 vs. ExPASy Swiss-Prot
Match: Q3ZC01 (CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 3.3e-83
Identity = 152/269 (56.51%), Postives = 199/269 (73.98%), Query Frame = 0


Query: 9   SIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKDN 68
           S +I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  DY YQ L+ N
Sbjct: 9   SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCN 68

Query: 69  VDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIELLRQCGIDF 128
           VD+LK+IQLGLTF +E+G  P  GT     WQFNF+ FN++ED++A DSIELL   GI F
Sbjct: 69  VDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQF 128

Query: 129 KKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAGFFD 188
           KK+ EEGI+   F ELLM+SGVVL +GV W++FHSGYDFGYL+K+LT  +LPE +  FF+
Sbjct: 129 KKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFE 188

Query: 189 LINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRKLRD 248
           ++ ++FPV+YD+K+LMK C +L GGL ++AE L++ERIG  HQAGSDSLLT   F K+R+
Sbjct: 189 ILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 248

Query: 249 TFFNG--STQKYAGVLYGLG-----VENG 271
            FF       KY G LYGLG     V+NG
Sbjct: 249 MFFEDHIDDAKYCGHLYGLGSGSSYVQNG 272

[Close]

BLAST of Lcy01g015480 vs. ExPASy TrEMBL
Match: A0A6J1BVW9 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=3 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 1.9e-153
Identity = 261/274 (95.26%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWN NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQFNFREFN+SED+FASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           ++QAGFFDLINIYFP+VYDIKHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGST+KYAGVLYGLGVE+GQRTN
Sbjct: 241 CTFRKLRDTFFNGSTKKYAGVLYGLGVESGQRTN 274

[Close]

BLAST of Lcy01g015480 vs. ExPASy TrEMBL
Match: A0A5A7V9Q6 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002070 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 8.1e-149
Identity = 254/274 (92.70%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 61  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 120

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE GNLPTCGTDKF IWQFNFREFNI  D+FASDSIEL
Sbjct: 121 NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 180

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP
Sbjct: 181 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 240

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
             QAGFF+LIN+YFPVVYDIKHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 241 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 300

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGS QKYAGVLYGLGVENGQRTN
Sbjct: 301 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 334

[Close]

BLAST of Lcy01g015480 vs. ExPASy TrEMBL
Match: A0A1S3BD45 (Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103488344 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 8.1e-149
Identity = 254/274 (92.70%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE GNLPTCGTDKF IWQFNFREFNI  D+FASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
             QAGFF+LIN+YFPVVYDIKHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGS QKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]

BLAST of Lcy01g015480 vs. ExPASy TrEMBL
Match: A0A7J6E4Y5 (Poly(A)-specific ribonuclease OS=Cannabis sativa OX=3483 GN=F8388_013785 PE=3 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.1e-148
Identity = 254/274 (92.70%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSIL KGDSI IREVWN NL+EEFALIR+IVD FNYIAMDTEFPGVVLRP+G FKNINDY
Sbjct: 1   MSILSKGDSIHIREVWNDNLDEEFALIRDIVDRFNYIAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQFNFREFNISEDVFASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNISEDVFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNE+GIDVNRFGELLMSSG+VLNDGVNWVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           +SQA FFDLINIYFP+VYDIKHLMKFCNSLHGGLNKLAELLDVER+GVCHQAGSDSLLTA
Sbjct: 181 DSQADFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLDVERVGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLR+TFF+GST+KYAGVLYGLGVENGQ TN
Sbjct: 241 CTFRKLRETFFSGSTEKYAGVLYGLGVENGQSTN 274

[Close]

BLAST of Lcy01g015480 vs. ExPASy TrEMBL
Match: A0A2C9UB26 (Poly(A)-specific ribonuclease OS=Manihot esculenta OX=3983 GN=MANES_16G128000 PE=3 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 1.1e-148
Identity = 250/274 (91.24%), Postives = 268/274 (97.81%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSI+PKGDSIQIREVWN NLEEEFALIREIVD+FNY+AMDTEFPGVVLRP+G FKNINDY
Sbjct: 1   MSIIPKGDSIQIREVWNDNLEEEFALIREIVDQFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NYQTLKDNVDMLKLIQLGLTFSDEKGNLP+CGTDK  IWQFNFREFNISED+FASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPSCGTDKSCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNE+GIDVNRFGELLMSSG+VLNDGV+WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           ++QAGFFDLIN+YFP+VYDIKHLMKFCNSLHGGLNKLAELL+VER+GVCHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLRD FF+GST+KYAGVLYGLGVENGQ TN
Sbjct: 241 CTFRKLRDNFFSGSTEKYAGVLYGLGVENGQNTN 274

[Close]

BLAST of Lcy01g015480 vs. NCBI nr
Match: XP_022132308.1 (probable CCR4-associated factor 1 homolog 7 [Momordica charantia])

HSP 1 Score: 551.6 bits (1420), Expect = 3.8e-153
Identity = 261/274 (95.26%), Postives = 271/274 (98.91%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWN NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDY
Sbjct: 1   MSILPKGDSIQIREVWNDNLEEEFALIREIVDEFNYIAMDTEFPGVVLRPVGAFKNINDY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQFNFREFN+SED+FASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNVSEDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRTLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           ++QAGFFDLINIYFP+VYDIKHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINIYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGST+KYAGVLYGLGVE+GQRTN
Sbjct: 241 CTFRKLRDTFFNGSTKKYAGVLYGLGVESGQRTN 274

[Close]

BLAST of Lcy01g015480 vs. NCBI nr
Match: XP_038885551.1 (probable CCR4-associated factor 1 homolog 7 [Benincasa hispida])

HSP 1 Score: 540.4 bits (1391), Expect = 8.8e-150
Identity = 256/274 (93.43%), Postives = 265/274 (96.72%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDF 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NY+TLKDNVDMLKLIQLGLTFSDE GNLPTCGTDKF IWQFNFREFNI  D+FASDSIEL
Sbjct: 61  NYRTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGNDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLN+ VNWVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
             QAGFF+LIN+YFPVVYDIKHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGS QKYAGVLYGLGV+NGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVDNGQRTN 274

[Close]

BLAST of Lcy01g015480 vs. NCBI nr
Match: XP_021686091.1 (probable CCR4-associated factor 1 homolog 7 [Hevea brasiliensis])

HSP 1 Score: 537.0 bits (1382), Expect = 9.8e-149
Identity = 250/274 (91.24%), Postives = 266/274 (97.08%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSI+PKGDSIQIREVWN NLEEEFALIREIVD FNY+AMDTEFPGVVLRP+G FKNINDY
Sbjct: 1   MSIVPKGDSIQIREVWNDNLEEEFALIREIVDRFNYVAMDTEFPGVVLRPVGNFKNINDY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NYQTLKDNVDMLKLIQLGLTFSDE GNLPTCGTD F IWQFNFREFNISED+FASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDNFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDFKKNNE+GIDVNRFGELLMSSG+VLNDGV+WVTFHSGYDFGYLLKLLTCRSLP
Sbjct: 121 LRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDGVHWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           ++QAGFFDLIN+YFP+VYDIKHLMKFCNSLHGGLNKLAELL+VER+GVCHQAGSDSLLT+
Sbjct: 181 DTQAGFFDLINVYFPIVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLRD FF+GST+KYAGVLYGLGVENGQ TN
Sbjct: 241 CTFRKLRDNFFSGSTEKYAGVLYGLGVENGQNTN 274

[Close]

BLAST of Lcy01g015480 vs. NCBI nr
Match: XP_008445259.1 (PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 536.2 bits (1380), Expect = 1.7e-148
Identity = 254/274 (92.70%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 1   MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE GNLPTCGTDKF IWQFNFREFNI  D+FASDSIEL
Sbjct: 61  NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
             QAGFF+LIN+YFPVVYDIKHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 181 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGS QKYAGVLYGLGVENGQRTN
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 274

[Close]

BLAST of Lcy01g015480 vs. NCBI nr
Match: KAA0064893.1 (putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 536.2 bits (1380), Expect = 1.7e-148
Identity = 254/274 (92.70%), Postives = 263/274 (95.99%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MSILPKGDSIQIREVWNANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+
Sbjct: 61  MSILPKGDSIQIREVWNANLEEEFALIRAIVDKFNYIAMDTEFPGVVLRPLGTFKNINDF 120

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           NY+TLKDNV+MLKLIQLGLTFSDE GNLPTCGTDKF IWQFNFREFNI  D+FASDSIEL
Sbjct: 121 NYRTLKDNVEMLKLIQLGLTFSDEDGNLPTCGTDKFCIWQFNFREFNIGSDIFASDSIEL 180

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           LRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLND VNWVTFHSGYDFGYLLKLLTCR LP
Sbjct: 181 LRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNDDVNWVTFHSGYDFGYLLKLLTCRGLP 240

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
             QAGFF+LIN+YFPVVYDIKHLMKFCNSLHGGLNKLAELL+VERIGVCHQAGSDSLLTA
Sbjct: 241 NDQAGFFELINVYFPVVYDIKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA 300

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQRTN 275
           CTFRKLRDTFFNGS QKYAGVLYGLGVENGQRTN
Sbjct: 301 CTFRKLRDTFFNGSIQKYAGVLYGLGVENGQRTN 334

[Close]

BLAST of Lcy01g015480 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 450.3 bits (1157), Expect = 1.1e-126
Identity = 207/272 (76.10%), Postives = 243/272 (89.34%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVWN NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTD-KFFIWQFNFREFNISEDVFASDSIE 120
           +Y+TLK NV++LK+IQLGLTFSDEKGNLPTCGTD K+ IWQFNFREF++  D++A+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSL 180
           LLRQ GIDF KNNE GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++L
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLT 240
           PE+Q GFF++I++YFP VYDIKHLMKFCNSLHGGLNKLAELLDVER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ 272
           +CTFRKL++ FF GS +KY+GVLYGLGVENGQ
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQ 272

[Close]

BLAST of Lcy01g015480 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 441.8 bits (1135), Expect = 4.0e-124
Identity = 201/271 (74.17%), Postives = 238/271 (87.82%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           +Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQFNFREF++  D+FA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           +SQ  FF LIN+YFP VYDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVENGQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Lcy01g015480 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 441.8 bits (1135), Expect = 4.0e-124
Identity = 201/271 (74.17%), Postives = 238/271 (87.82%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           +Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQFNFREF++  D+FA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           +SQ  FF LIN+YFP VYDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ 272
           CTFRKL++ FF G   KY+GVLYGLGVENGQ
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQ 271

[Close]

BLAST of Lcy01g015480 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 438.7 bits (1127), Expect = 3.4e-123
Identity = 203/268 (75.75%), Postives = 234/268 (87.31%), Query Frame = 0


Query: 6   KGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTL 65
           K DSI IREVW+ NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  KDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIELLRQCG 125
           K+NVD+LKLIQ+GLTFSDE GNLPTCGTDKF IWQFNFREFNI ED++AS+SIELLRQCG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLPESQAG 185
           IDFKKN E+GIDV RFGEL+MSSG+VLND ++WVTFH GYDFGYL+KLLTC+ LP  QA 
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTACTFRK 245
           FF L+ +YFP VYDIKHLM FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVENGQRT 274
           L++ +F GST+KY GVLYGLGVE+G  T
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDGTTT 273

[Close]

BLAST of Lcy01g015480 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 438.0 bits (1125), Expect = 5.8e-123
Identity = 199/269 (73.98%), Postives = 236/269 (87.73%), Query Frame = 0


Query: 1   MSILPKGDSIQIREVWNANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDY 60
           MS+  K DSIQIREVWN NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYQTLKDNVDMLKLIQLGLTFSDEKGNLPTCGTDKFFIWQFNFREFNISEDVFASDSIEL 120
           +Y+TLK NV++LK+IQLGLTFS+E+GNLPTCGTDK+ IWQFNFREF++  D+FA DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRQCGIDFKKNNEEGIDVNRFGELLMSSGVVLNDGVNWVTFHSGYDFGYLLKLLTCRSLP 180
           L+Q GID  KN  +GID  RF ELLMSSG+VLN+ V+WVTFHSGYDFGYLLKLLTC++LP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ESQAGFFDLINIYFPVVYDIKHLMKFCNSLHGGLNKLAELLDVERIGVCHQAGSDSLLTA 240
           +SQ  FF LIN+YFP VYDIKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVEN 270
           CTFRKL++ FF G   KY+GVLYGLGVEN
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVEN 269

The following BLAST results are available for this feature:

BLAST of Lcy01g015480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKZ2	1.6e-125	76.10	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SAI2	5.6e-123	74.17	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	4.8e-122	75.75	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9S9P2	8.2e-98	64.77	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q3ZC01	3.3e-83	56.51	CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=...	[more]

BLAST of Lcy01g015480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BVW9	1.9e-153	95.26	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005192 PE=...	[more]
A0A5A7V9Q6	8.1e-149	92.70	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BD45	8.1e-149	92.70	Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103488344 PE=3 SV=1	[more]
A0A7J6E4Y5	1.1e-148	92.70	Poly(A)-specific ribonuclease OS=Cannabis sativa OX=3483 GN=F8388_013785 PE=3 SV...	[more]
A0A2C9UB26	1.1e-148	91.24	Poly(A)-specific ribonuclease OS=Manihot esculenta OX=3983 GN=MANES_16G128000 PE...	[more]

BLAST of Lcy01g015480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132308.1	3.8e-153	95.26	probable CCR4-associated factor 1 homolog 7 [Momordica charantia]	[more]
XP_038885551.1	8.8e-150	93.43	probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]	[more]
XP_021686091.1	9.8e-149	91.24	probable CCR4-associated factor 1 homolog 7 [Hevea brasiliensis]	[more]
XP_008445259.1	1.7e-148	92.70	PREDICTED: probable CCR4-associated factor 1 homolog 7 [Cucumis melo]	[more]
KAA0064893.1	1.7e-148	92.70	putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy01g015480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32070.1	1.1e-126	76.10	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	4.0e-124	74.17	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	4.0e-124	74.17	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	3.4e-123	75.75	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	5.8e-123	73.98	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 161..243 e-value: 1.3E-5 score: 24.7
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 15..136 e-value: 1.3E-11 score: 44.3
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..269 e-value: 4.8E-99 score: 332.9
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 1..274
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..274
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g015480.1	Lcy01g015480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity