Lcy01g014940 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g014940
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRan BP2/NZF zinc finger-like superfamily protein
LocationChr01: 36332941 .. 36340644 (+)
RNA-Seq ExpressionLcy01g014940
SyntenyLcy01g014940
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTTACGTGTATATATCTGTAGCAAATATTTACAAATTTGACCAATTCAATATATATATATATATATATATATATATCTATCATTTTTTTTGAAGCAATACATATATCATATGTTAATGCAAGATTTTTTTTTTTTTTTTTTGAAGTTGGAGATTACACGTGTTCTGAATACAAGAAAATTTTAATATAAGGTTATTTATTGCATGTTGTACAATTTAAAATTTCAATAAATATTAGTAGTTATAATTTATATTTTATTAACCTAATATTTGTTATATATATATATATATGATATTGTGCAGGAAAGAAGTTGAAGATTACACGTGTTCCTGAATATATATAATGCACACAATACCCATGGAGAACTATGTAAATAGAATAGCTGAATCAAAAAAAAAAAAGAAAAAACTATGTAAATAGAATAGCTATCTTATTTTGAAAGATTTAAAAAATTAAGAATTAAGCAAAGAAAACTTCCCGAAAATTGATGACTCTCTAAAGAATTTTTGACAAATTAAAAGACTTTAAATATAAAAAAATCTCTTACGGAAGAATTAAAGATATCAATTGAGTTTTCGATCTCAAGAACAAAGTTACGTAACTTTCAAAGACAATTTTACATCGGAGAGAAAAAAGAATTAGAGGATATTAGAGAAATATATTAGATATAATGAAAACTAGAATTAGAGAAATATATTACACTTTTTTTTTTAAATTAGAAATATATTACACTTCAAAGTTATCTAATTCTTGAACTAAATTTCTTTTGAAATGTCACGTGAACAAGTACCATACATAGAGGAATAATAATTGCATGAATAACTTCCATGTGTTGCAATGTTGAAAAAATCACACGCTTGGTCATATCATACAGAGGTGACATGAAATGGGACTTTTGCCACGTCACAAGCACAACGTTTTTAGGAATTCGGAGGCGTTTCGGGCTGAACCAGATGGAACCGGGGCGGCCAGGAGCAACAGGGACCGAACGGAGGCGGAGGAGCTCGGGCCCGACCCTTTGGTCTGGTCTTCCTCTGGGTTGGTTTCCTGGCCCTATCTTGCCTGGTTGTCCTCGTCGGCTTCTTGTGCTTCGGAGTGATCCAAAATTACCTATAACATTTGGTTAGTAACATTTTTCTGAATTTTAGTTCGTAACACAGTTTAAGGTATGCAATTTCAATTTTTAACAAATTTTAGACCAAATTGTTATTTTGAAACAACAACATTAAAAAAATATTTTTGGTTAGTAACAAATTCTGAACTTTATTGCATATTGTGCAACTTAAAATTTTAAAATATGTTAGTAGTTATAATTTATATTTTATTTTAGAAGACAGTATGTAAATGAAAGAGTTAGGTCCAAAGCTACTCAAGTTCAGACTCCCACAATAACCCATGCAAGACTCTATATATAAATATAATAGCTATCACTCATTTTGAAAGGTCTAGAAAATTAAGAATTAAGGGAATTTAGAGAAAACTTTCATAAAATTTATACTAATGATCAAGAGGTATTTTTTTCAAAAGTAATGACCAAGAGGTCTGTAGTTAGAATATCTCCCCCTCACCTATAACAAAAAAAAAAACTTTCATAAAGCTAAAGGTTCTCTAAAAACTTTTTGAAAACGAAAAATTGAAGATAAAAAAACTTTAAAGATAATTTTTTTTTTTTCGAAGAACTAAAGACCTGAAGACAAGACTCTTTAAGAAGTTGAAGACTCAATCTCGAGAATAGACTACAGAGCCCTCCAGACAATTTTACATTTGGGAGAGAAATAATGAAAAGAGCAGAGATTGTATTACTTAACATAAATAAAATTACACACGACTTTTTTTTTTTTTTTTTTTTCCTGAAATCATGTGAACAAATGCATATGTAGGAATAATACTACATGGATAAAATAATCATGCTGGGTCATATCACATATTATATGAGATTTTTAGATTTATTAGAAAGTACTTCTGGTCCATGAATTTCCATAAAAGAAACTTTTCTCGATTTGTTAAAAAAATACTTCTAGTACATGAATTTCCATGGAAGTAACAATTTAAGTTGCCGAACATCTAGCAATTTAGTGCATGTACTTTCAGTTTTATAGCAAATTTTAGAATACAATAACTAAGGCCCCGTTTGATAACCATTTGATTTTTTGTTTTTGGTTTTTGGTTTTTAAGCTTATAAACACAACTTCCAACTCTAAGTTTCCTTGGCTTTTCACCTACCTTCTTCCCATGTTTTCAAAAACCAAGCCAATTTTTGAAAACTAAAAAAAGTAGGGCCCGTTTTGTAACGTTCTCGTTTCTTGTTTCTGTTTCTTCATTTTTAATAAAGAAAAATAGAATTTCATGACTCTAACACCTATACATTCAATAATAATAAACCCATATTCTTATTTATGTTTGGAAAAAATTGGAAACAAGAACAAAAAAGGAGAAACTAGTTTTAGTTGTTCCCAAAAGTTCTATATAAATTTTGGGAGTGTTTCTAAAAAATGAGAAACAAGAAACATACATAGTTATTAAATGCTTAGATTTCTTAATAAAATTAGAAACAATAAACAAGAAACGAGAACGTTACCAAACGGGTCCGTAGTTTTCAAAAGCTTGTTTTTGTTTTTAGAATTGGGTTAGGAATTCAAGTGTGTCTTTAACAAAAATGAAAACCATGATGAGGAAATTTAAAGAAAACAAGTCTAATTTTCAAAAACCAAAATCCAAAAACCAAATGGTTATCAAACGGGGCCTAAACTATTACTTTCATTTTTTTTTTAATTCAACAATACTTGGAGTAGGAGGATTCAAAACTCGAACCTCTTGATTGATGATATATGTCTTAACTAGTTGAACTATACCGAGGTAATGACCAATATATATATATATATATATATATATATATATATATATTAACATTTAAAAATATCTATGAATTTCCCCATTTTCCTTATTATTTGAGATTATTACGTCAGCTAATGAAAGACATAATGGACCGTGTAGTATTTTGGGCTGCTGAGGTTTAAAACGAAATGGGCCAAGTCCAATAGTCATCATCAACTAATGATCAACTGAAATTTTCCTTAGCCCAATGATAAAGCTGCACAATCTTTTCATTTTATATGTTCACATAAATTAAATAAATAAAAAAAAAAATTGGGAGAATTTTCAAAGAAATATTTATAGCAAAAATTGAATTAAAAATGAATAAAATTGAAAGCTGGATATTAATTATTATGAAGTCTTTATTGGAGGGGAAGGATTGAGAGCTGTGAAAAGAAAAGGAAAGGAAAGGAAAGGAGGGAATGAATAGTTGGGGACTTTGAGGGCATAATGTAAAAGATTTTGGAGGACTAAAAAGTAAAAGAAAAGACGCAACTTTTATCATTGTCATGACGTTTTACTCCCATTCCTATATATACATCTCCGCCACGCCACATGCCCACCTCACGTGCATGCAACCCAACTCCCCATTTACCTTAACTAATTTTACCATTCTATTTTTAACTTTCAACCATACCTGAAATTTACCCATGAAATGAAACTTCAGTTTATTGTAAATCTCGAAATAATATTTTCTATATGAGTATCAAGTTGACTTCAGGTAATTGATATGTCCTAAACAATTTATAGCTCAACGGTAATTGACATGTCCAGTGTCCTAAACAATTTTTCAGGTTGATACTTCGGTGTTGATACTTCAATTCAATTATAAGTTTAATATTTAAACTTTCGAACATGTATTTAATATGTTTTTGAACTTAATAGGTCATTGAGCTTTTAATTATGTCTAATATGCTTTTGAACTTTCAATTTTGTATCTAATAGATTCATTCCACTTATTACACAAAATTAAAAGGCCATGATCTTATAAGACACAAAATTGAACTTTCAATTATGTTTCTTGTAGTTCAACATATTTTAATAAGATCAAATATGACCACGAAGTAGAGTTCGTTTGGAATACCTTTTAGTTTAAATGTTTTTTAAGAATGCATTTTATTTTAAAAATTTTGTATAAAAATTGTTTAGAATTTAAACATTCATATGTTTGGTTACATTTTCTCATAAGTGTTTTTATACACAAGTTATCATATACATTAAAAACTTTTTTTTTTAAAAAAATTTGGTTTCAAATGTTTCACTCAAAATGGTTTATTTCTCAATCTCATTTTTCAATAAGTCATTTTTAGTGGTTGTCAAAAACTAGAATTTTTTTTAAAATGATTTTTTTTTCAAAATTAAACACTTGAGAAGTTAAACCAAACACACTGGTAATTAGATACAAAATTGAAAGTTTAAGGATTATTAGTCACAACCTTAAAAGTTCATATACTAAACGTGCAATTTAACCTAAATAGTATTTAAGAGAGTGAAAACTTAAAAGGTGTCAGTTGTGTTTTATGCTTTTGTTTCTTATTTTCAGAAAAATACATATTGGTAGTTACTTGATTTTTCATTTTAAAATTTCTAGGAGATAATATCAAACATGAAAAAAAAAAGGTTTATTTATTTATTTATTTTTTTTAAATTAAAAATGCATAAAAATAATAATAAAAAAAATCAAACTTTATATATTTTAAAAATGTTCAAAAATTGAGAGAACATGAAAAAGAAAATATCTAATACATTAATTTTTAACACAAAATATGAAATGAGAACATATTACTTAGTGCCCATTTGGGAGTGATTTTGAAAAGGTTAAAATCACTTTTATCATATTCTAAATCTCTCCGAAACAAGTCTTTAACAATTCAAAATCAATTTTGATGATATGAAAATCACATATTTAAAAGCGTAAAATCAAATATTAAATCGATTTCGAGTGATTAAAGACATGTTTCGAAGTGATTTCAAACATGATAAAAGTGATTTTAGTCATTTCAAAATCATTTCCAACCATGCACTTTAATGGGTCCTAAACAATTACCTCAATAAATTTACAGTGAAATAGCTGTATAATATTTGGGCAGAGGAGGCTAAAAACTGTATAGGCACATGCCACGTAAGTACTTAAATAGAAAAAGAAAAAGACCTAAAAGGAAAAAAAAAAAAAAAGAAATAGTAATTATTTGTGGAAGTTGTAAATAAAATAAAATTAAAAGAAAAAAGAAAATTAAAGGGAGAGAGAGAATACGTTAGGGTATTTGGAGTTGGGTGTCGTGGTTATGCATGGAAGCGTTTCTCCCAAAAAGAGAATCGAATCAGTACTCTTCTCCCTATTCCCTTTATTTTTGCTTTTTCACAGTTTGCTTCAGCCTTCCTCCTTTACCATTCCCCAAGAAGAGACACCCAAAAGAAAAAAAAAAAAAAAAAAACAATCCCATATATCTTAATTAAACTCTTCACTTAGATATCGAGTTAGAATTTGAACTTCCAACCTCAAAAGAAGTAGATATTTTGGCTGCTGAGTTATATTCATACTAACTACATAATTAATAACATGTAGTTCATAAAACAATTTTTTTTTTTCAAAGCTTATTCAAAATAACACGAGGAGTGAGAGAATTCAAACCATGTTTCGATTGTCTCATAAAACGTGAAAATTTCGTATAGGAATTTAGGAGATTAAGGAAAGAAAATGAAATTTGAAAGAAAGGGAAAAAAAAAAAAGAAGAGGAATTAATGGATGATTGAAAAAGGTATATTAGAGGGAGTGAAGAGAGGAAAAGAGAAAGAAAAGATGGTCAAAATTCAAAAATTTGAAACTCCTCGAAAGCTTCTCTCTCTCTCTCCCACCACCACCATCATCATCAGTTTCGACTATCTTTATCGAAACTCTCTTAACCATTTTTGCTTGCTTTGATTTTGAAGCCTTAAAATTACATCTCAATCTCATCAAATTAAATATTCAATTTTATTTTATTTTTTCAAACGGTTTCTTTTCTTAAGATATTATCTATTTTAATATCACTTTCCAATTTATATAATTTTTAAAATTTAATAATCGTGTGGGGTCCCTTTCGGATGAGTTATTCGAATATTCATTTTGTTTGATAATTGAGAAAGTAGAAATTTTTGTTCTTCCTTATCCAATTTCATCAGATTCAAAACCCAACAAGTTGTGATGTGTATAATTCGGGTGAATTGGAATTGGAATTTGAAATATAAGGAAAATGACAATGGGAATTGTAAAGAAAAAAAGAATGGTTTTTGCTTGTGTTTGGTTTAGCTTTATCGAATTTCAATTTCTCTCTCTCTCTATCTCTAAAAAATTATTCAAATTTAGCTTTATGTGATTCCATGCATCATAGGATCACTTACTGTTCAAACATTTTAAAAAAAAAAAAGCCTAAACCTCAAATTTAGTATTTATTGCTTGAGCTTAATTGCCATTTGGTTCTCATAATCTTAAAAAAAATCAATTTGATCCTTATAACTTTACATATATACCACAAAATCAATCCCTAAACCATATATTATCCACCCGACTCCTAATTCATTCTGTTTTCAACCTTGATATGGTCAACTAACACAATCAACCCACAAAAATTATCAACTTATTGTCATTTTTTTAGTTCAAAAATATATACGAAACCTCTAACTTTTGAGTCAAAGATATAAGTCATAACCAATTGAACTATGTCAGATTGGTCTTATTGCTATGTTAAATTAAAGTAACACGCTAGTATAGTAATGATAAATTTGTGAGGTTTGATTAAGTTACAAAAGCTAAGAATATATGCCAATTTGAGTCTAATTCAATTGATCATGACGTATGCTCTCAACCAAAAGATTTAAAGGTTCAGGTCCCGACCTGTTCCTTGTTGTTGAACTTAATAAAAAGAACCAAGATTATAGCTTAATTGCATTTTCAACTAAAATGTTACAAGTTCAAATTCTAGCCACTAAGATTTTTTTTAAACCATAAAGAATTAATTTGAATTTTTTTTTTGAGTATATCGGATTCAAACCTCTGACCTTTGGTCGAGAATATAAGCCAATTACCATTGAACTATACTCGCTTTTGATAGAGACCAAAAGAGATATTTGATTTTTTTTTTTCTAAAGGAAAAAACCTAAAACCGCCAGTGAGTCAGTGACTAATTGGCAAGCCAAAACCTCGTTTTATTCTTCTCGATCCTCGAGAAGAAAAAAAACAAAAAAAACAAAAGAACAAAAAAGCCCAGTTCACCGGTATAAAAACCACCATGACCGGCTGGTTCACCAGAGAAACGTGATCGATCAGGCCATTAAAAACCACCACACCACCACTTCAGACTTCAGCCTTCAACTTCACGCACAAGGTAAGCCTTTCGGTTACTTCAAACAAATTTCCATTTTCCCTTCAAACCCTAAACTTCCAAATTCGGGATTTTCAAAAATCTTTGCAGGATGAGCCGCCCGGGGGATTGGAATTGCAGGTCCTGCAACCATCTCAACTTCCAACGGCGGGACTCCTGTCAGCGCTGTGGAGACCCTAGGGCTGACTTCGGCGGCGGCTTCGGCGGCGGAAGAGTTGGTTCTTCGTCCTTTGGTTTCACCACCGGCCCCGACGTCCGCCCTGGGGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCCTCCAAGGATGAGGCTTCCTCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGTGCCTCCAACCGCCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGGTAG

mRNA sequence

ATGGTTGTTTACGTGATGAGCCGCCCGGGGGATTGGAATTGCAGGTCCTGCAACCATCTCAACTTCCAACGGCGGGACTCCTGTCAGCGCTGTGGAGACCCTAGGGCTGACTTCGGCGGCGGCTTCGGCGGCGGAAGAGTTGGTTCTTCGTCCTTTGGTTTCACCACCGGCCCCGACGTCCGCCCTGGGGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCCTCCAAGGATGAGGCTTCCTCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGTGCCTCCAACCGCCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGGTAG

Coding sequence (CDS)

ATGGTTGTTTACGTGATGAGCCGCCCGGGGGATTGGAATTGCAGGTCCTGCAACCATCTCAACTTCCAACGGCGGGACTCCTGTCAGCGCTGTGGAGACCCTAGGGCTGACTTCGGCGGCGGCTTCGGCGGCGGAAGAGTTGGTTCTTCGTCCTTTGGTTTCACCACCGGCCCCGACGTCCGCCCTGGGGATTGGTACTGCGCCGTCGCCAACTGCGGCGCTCATAACTTCGCTAGCCGCTCTATCTGCTTCAAGTGCGGCGCCTCCAAGGATGAGGCTTCCTCCGCCGCCTACGACGGCGATTTGACCAGAATGAGAGGCTTTAACTTCGGCGGTGCCTCCAACCGCCCTGGATGGAAATCTGGTGATTGGATCTGTGCCAGGTAG

Protein sequence

MVVYVMSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDWICAR
Homology
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BLAST of Lcy01g014940 vs. ExPASy Swiss-Prot
Match: O13801 (Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC17H9.04c PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-09
Identity = 44/139 (31.65%), Postives = 49/139 (35.25%), Query Frame = 0 

Query: 8   RPGDWNCRSCNHLNFQRRDSCQRCG----------------DPRADFGGGFGGGRV---- 67
           RPGDWNC  C   NFQRR SC RC                  P   +G  +G G      
Sbjct: 343 RPGDWNCPMCGFSNFQRRTSCFRCSFPGPTHVSAATGSNTFSPDFPYGNSYGNGSSHFIA 402

Query: 68  ---GS--------------------------SSFGFTTGPDVRPGDWYCAVANCGAHNFA 98
              GS                          SS  F      R GDW C    CG HNFA
Sbjct: 403 NYGGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFGGNVPFRAGDWKCGSEGCGYHNFA 462

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BLAST of Lcy01g014940 vs. ExPASy Swiss-Prot
Match: Q27294 (RNA-binding protein cabeza OS=Drosophila melanogaster OX=7227 GN=caz PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.0e-05
Identity = 37/114 (32.46%), Postives = 45/114 (39.47%), Query Frame = 0 

Query: 5   VMSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGD 64
           V  R GDW C SCN+ NF  R+ C RC  P+ D  G  GGG  G    G   G   R  D
Sbjct: 272 VQPRDGDWKCNSCNNTNFAWRNECNRCKTPKGDDEGSSGGGGGGGYGGGGGGGGYDRGND 331

Query: 65  WYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPG 119
                   G   + +R    + G S+         G  +R    N GG   R G
Sbjct: 332 -----RGSGGGGYHNRD---RGGNSQGGGGGGGGGGGYSRFNDNNGGGRGGRGG 377

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BLAST of Lcy01g014940 vs. ExPASy Swiss-Prot
Match: P32770 (Asparagine-rich protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NRP1 PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 18/27 (66.67%), Postives = 19/27 (70.37%), Query Frame = 0 

Query: 8   RPGDWNCRSCNHLNFQRRDSCQRCGDP 35
           RPGDWNC SC   NFQRR +C RC  P
Sbjct: 355 RPGDWNCPSCGFSNFQRRTACFRCSFP 381

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BLAST of Lcy01g014940 vs. ExPASy Swiss-Prot
Match: Q5ZLX5 (Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=ZRANB2 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 5.5e-04
Identity = 30/87 (34.48%), Postives = 37/87 (42.53%), Query Frame = 0 

Query: 10 GDWNC--RSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVR----PG 69
          GDW C  + C ++NF RR SC RCG  +          + G +  G T     R      
Sbjct: 11 GDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMM---KAGGTEIGKTLAEKSRGLFSAN 70

Query: 70 DWYCAVANCGAHNFASRSICFKCGASK 91
          DW C    CG  N+A RS C  C   K
Sbjct: 71 DWQC--KTCGNVNWARRSECNMCNTPK 92

[Close]
BLAST of Lcy01g014940 vs. ExPASy TrEMBL
Match: A0A6J1KQR0 (uncharacterized RNA-binding protein C17H9.04c-like OS=Cucurbita maxima OX=3661 GN=LOC111496351 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-65
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADF-GGGFGGGRVGSSSFGFTTGPDVRPGD 65
           MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADF GGG+GGGR GSSSFGFTTGPDVRPGD
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCHRCGDPRADFGGGGYGGGRGGSSSFGFTTGPDVRPGD 60

Query: 66  WYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDW 125
           WYCAVANCGAHNFASRSICFKCGASKDEAS+AAYDGDL+R+RGFNFGGASNRPGWKSGDW
Sbjct: 61  WYCAVANCGAHNFASRSICFKCGASKDEASAAAYDGDLSRIRGFNFGGASNRPGWKSGDW 120

Query: 126 ICAR 129
           ICAR
Sbjct: 121 ICAR 124

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BLAST of Lcy01g014940 vs. ExPASy TrEMBL
Match: A0A6J1GJE4 (TATA-binding protein-associated factor 2N-like OS=Cucurbita moschata OX=3662 GN=LOC111454402 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.8e-65
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGD 65
           MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG G+GGGR GSSSFGFTTGPDVRPGD
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCHRCGDPRADFGGAGYGGGRGGSSSFGFTTGPDVRPGD 60

Query: 66  WYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDW 125
           WYCAVANCGAHNFASRSICFKCGASKDEAS+AAYDGDL+R+RGFNFGGASN PGWKSGDW
Sbjct: 61  WYCAVANCGAHNFASRSICFKCGASKDEASAAAYDGDLSRIRGFNFGGASNCPGWKSGDW 120

Query: 126 ICAR 129
           ICAR
Sbjct: 121 ICAR 124

[Close]
BLAST of Lcy01g014940 vs. ExPASy TrEMBL
Match: A0A0A0LLW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G380050 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 117/125 (93.60%), Postives = 120/125 (96.00%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG-FGGGRV-GSSSFGFTTGPDVRPG 65
           MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG +GGGRV GSSSFGFTTGPDVRPG
Sbjct: 81  MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPG 140

Query: 66  DWYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGD 125
           DWYC VANCGAHNFASRSICFKCGA+KDE S+AAYDGDL RMRGFNFGGASNRPGWKSGD
Sbjct: 141 DWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRPGWKSGD 200

Query: 126 WICAR 129
           WICAR
Sbjct: 201 WICAR 205

[Close]
BLAST of Lcy01g014940 vs. ExPASy TrEMBL
Match: A0A1S3BBL4 (uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC103488288 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.3e-64
Identity = 117/125 (93.60%), Postives = 120/125 (96.00%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG-FGGGRV-GSSSFGFTTGPDVRPG 65
           MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGG +GGGRV GSSSFGFTTGPDVRPG
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGSYGGGRVGGSSSFGFTTGPDVRPG 60

Query: 66  DWYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGD 125
           DWYC VANCGAHNFASRSICFKCGA+KDE S+AAYDGDL RMRGFNFGGASNRPGWKSGD
Sbjct: 61  DWYCTVANCGAHNFASRSICFKCGATKDETSAAAYDGDLPRMRGFNFGGASNRPGWKSGD 120

Query: 126 WICAR 129
           WICAR
Sbjct: 121 WICAR 125

[Close]
BLAST of Lcy01g014940 vs. ExPASy TrEMBL
Match: A0A6J1BUS6 (uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=3673 GN=LOC111004930 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 3.5e-62
Identity = 111/125 (88.80%), Postives = 116/125 (92.80%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGG--RVGSSSFGFTTGPDVRPG 65
           MSRPGDWNCRSCNHLNFQRRDSC RCG+PRADFGGG  GG  RVGSSSFGFTTGPDVRPG
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCHRCGEPRADFGGGGYGGAARVGSSSFGFTTGPDVRPG 60

Query: 66  DWYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGD 125
           DWYCA+ NCGAHNFASRSICFKCGA KD+AS+ AYDGD+ RMRGFNFGGASNRPGWKSGD
Sbjct: 61  DWYCAIGNCGAHNFASRSICFKCGACKDDASAGAYDGDIPRMRGFNFGGASNRPGWKSGD 120

Query: 126 WICAR 129
           WICAR
Sbjct: 121 WICAR 125

[Close]
BLAST of Lcy01g014940 vs. NCBI nr
Match: XP_023002539.1 (uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima])

HSP 1 Score: 258.8 bits (660), Expect = 2.4e-65
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADF-GGGFGGGRVGSSSFGFTTGPDVRPGD 65
           MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADF GGG+GGGR GSSSFGFTTGPDVRPGD
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCHRCGDPRADFGGGGYGGGRGGSSSFGFTTGPDVRPGD 60

Query: 66  WYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDW 125
           WYCAVANCGAHNFASRSICFKCGASKDEAS+AAYDGDL+R+RGFNFGGASNRPGWKSGDW
Sbjct: 61  WYCAVANCGAHNFASRSICFKCGASKDEASAAAYDGDLSRIRGFNFGGASNRPGWKSGDW 120

Query: 126 ICAR 129
           ICAR
Sbjct: 121 ICAR 124

[Close]
BLAST of Lcy01g014940 vs. NCBI nr
Match: KAG6585459.1 (Peptidyl-prolyl cis-trans isomerase CYP95, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 2.4e-65
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 6    MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGD 65
            MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG G+GGGR GSSSFGFTTGPDVRPGD
Sbjct: 971  MSRPGDWNCRSCNHLNFQRRDSCHRCGDPRADFGGAGYGGGRGGSSSFGFTTGPDVRPGD 1030

Query: 66   WYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDW 125
            WYCAVANCGAHNFASRSICFKCGASKDEAS+AAYDGDL+R+RGFNFGGASNRPGWKSGDW
Sbjct: 1031 WYCAVANCGAHNFASRSICFKCGASKDEASAAAYDGDLSRIRGFNFGGASNRPGWKSGDW 1090

Query: 126  ICAR 129
            ICAR
Sbjct: 1091 ICAR 1094

[Close]
BLAST of Lcy01g014940 vs. NCBI nr
Match: KAG7020377.1 (SPAC17H9.04c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 257.7 bits (657), Expect = 5.3e-65
Identity = 116/124 (93.55%), Postives = 121/124 (97.58%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGD 65
           MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG G+GGGR GSS+FGFTTGPDVRPGD
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCHRCGDPRADFGGAGYGGGRGGSSTFGFTTGPDVRPGD 60

Query: 66  WYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDW 125
           WYCAVANCGAHNFASRSICFKCGASKDEAS+AAYDGDL+R+RGFNFGGASNRPGWKSGDW
Sbjct: 61  WYCAVANCGAHNFASRSICFKCGASKDEASAAAYDGDLSRIRGFNFGGASNRPGWKSGDW 120

Query: 126 ICAR 129
           ICAR
Sbjct: 121 ICAR 124

[Close]
BLAST of Lcy01g014940 vs. NCBI nr
Match: XP_023538151.1 (uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGD 65
           MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG  +GGGR GSSSFGFTTGPDVRPGD
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCHRCGDPRADFGGAAYGGGRGGSSSFGFTTGPDVRPGD 60

Query: 66  WYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDW 125
           WYCAVANCGAHNFASRSICFKCGASKDEAS+AAYDGDL+R+RGFNFGGASNRPGWKSGDW
Sbjct: 61  WYCAVANCGAHNFASRSICFKCGASKDEASAAAYDGDLSRIRGFNFGGASNRPGWKSGDW 120

Query: 126 ICAR 129
           ICAR
Sbjct: 121 ICAR 124

[Close]
BLAST of Lcy01g014940 vs. NCBI nr
Match: XP_022951649.1 (TATA-binding protein-associated factor 2N-like [Cucurbita moschata])

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 116/124 (93.55%), Postives = 120/124 (96.77%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG-GFGGGRVGSSSFGFTTGPDVRPGD 65
           MSRPGDWNCRSCNHLNFQRRDSC RCGDPRADFGG G+GGGR GSSSFGFTTGPDVRPGD
Sbjct: 1   MSRPGDWNCRSCNHLNFQRRDSCHRCGDPRADFGGAGYGGGRGGSSSFGFTTGPDVRPGD 60

Query: 66  WYCAVANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDW 125
           WYCAVANCGAHNFASRSICFKCGASKDEAS+AAYDGDL+R+RGFNFGGASN PGWKSGDW
Sbjct: 61  WYCAVANCGAHNFASRSICFKCGASKDEASAAAYDGDLSRIRGFNFGGASNCPGWKSGDW 120

Query: 126 ICAR 129
           ICAR
Sbjct: 121 ICAR 124

[Close]
BLAST of Lcy01g014940 vs. TAIR 10
Match: AT3G15680.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 167.5 bits (423), Expect = 6.8e-42
Identity = 86/139 (61.87%), Postives = 92/139 (66.19%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGG------GFGGGRVGSSSFGFTTGPD 65
           MSRPGDWNCRSC+HLNFQRRDSCQRCGD R+  GG      G  GGR   S+FGFTTG D
Sbjct: 1   MSRPGDWNCRSCSHLNFQRRDSCQRCGDSRSGPGGVGGLDFGNFGGR-AMSAFGFTTGSD 60

Query: 66  VRPGDWYCAVANCGAHNFASRSICFKCGASKDEASS----------AAYDGDLTRMRGFN 125
           VRPGDWYC V NCG HNFASRS CFKCG  KDE  +          A +D D+ R R   
Sbjct: 61  VRPGDWYCTVGNCGTHNFASRSTCFKCGTFKDETGAGGGGGGIGGPAMFDADIMRSRVPG 120

Query: 126 FGGASNRPGWKSGDWICAR 129
            GG   R  WKSGDWIC R
Sbjct: 121 NGG---RSSWKSGDWICTR 135

[Close]
BLAST of Lcy01g014940 vs. TAIR 10
Match: AT5G25490.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 165.2 bits (417), Expect = 3.4e-41
Identity = 88/142 (61.97%), Postives = 99/142 (69.72%), Query Frame = 0 

Query: 6   MSRPGDWNCRSCNHLNFQRRDSCQRCGDPR-----ADFGGGFGGGRVGSSSFGFTTGPDV 65
           M+RPGDWNCR C+HLNFQRRDSCQRC +PR      D   GF GGR  SSSFGF TGPDV
Sbjct: 1   MNRPGDWNCRLCSHLNFQRRDSCQRCREPRPGGISTDLLSGF-GGRPVSSSFGFNTGPDV 60

Query: 66  RPGDWYCAVANCGAHNFASRSICFKCGASKDE--ASSAA-----YDGDLTRMRG-FNFGG 125
           RPGDWYC + +CG HNFA+RS CFKCGA+KDE   SSAA      D ++   RG F FGG
Sbjct: 61  RPGDWYCNLGDCGTHNFANRSSCFKCGAAKDEFSCSSAAATTGFMDMNVGPRRGLFGFGG 120

Query: 126 ASN------RPGWKSGDWICAR 129
           +S+      R  WKSGDWIC R
Sbjct: 121 SSSGGGGTGRSPWKSGDWICPR 141

[Close]
BLAST of Lcy01g014940 vs. TAIR 10
Match: AT2G26695.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 5.8e-25
Identity = 52/119 (43.70%), Postives = 72/119 (60.50%), Query Frame = 0 

Query: 10  GDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYCAV 69
           GDW C +C H NF++R+SCQ+CG P+      FGG  V +  +  T   +V  GDWYC  
Sbjct: 6   GDWLCGACQHANFKKRESCQKCGYPK------FGGVDVSTYLYNRT---EVMAGDWYCGA 65

Query: 70  ANCGAHNFASRSICFKCGASKDEASSAAYDGDLTRMRGFNFGGASNRPGWKSGDWICAR 129
            NCG+HN+ASR+ C++CG  K E +   Y     +M  +   GA+  PGWK+GDW+C R
Sbjct: 66  LNCGSHNYASRTSCYRCGMIKVEYTEQYYG---AQMVAYGNDGAACPPGWKTGDWVCPR 112

[Close]
BLAST of Lcy01g014940 vs. TAIR 10
Match: AT2G17975.1 (zinc finger (Ran-binding) family protein )

HSP 1 Score: 62.0 bits (149), Expect = 4.0e-10
Identity = 48/145 (33.10%), Postives = 59/145 (40.69%), Query Frame = 0 

Query: 8   RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPD----VRPG 67
           R GDW C  C + N+  R  C RC  PR                    T P+     R G
Sbjct: 5   REGDWECLGCRNRNYAFRSFCNRCKQPRLIMDN--------------NTSPNSKWLPRIG 64

Query: 68  DWYCAVANCGAHNFASRSICFKCGASKDEA--SSAAYDGD--LTRMRGFNFGGAS-NRPG 127
           DW C    C  +N+ASR  C KCG SK+ A  S+ A  G    T +  F  G  S ++PG
Sbjct: 65  DWIC--TGCTNNNYASREKCKKCGQSKEVAALSALAIPGASLQTHLHYFTRGPESHDQPG 124

[Close]
BLAST of Lcy01g014940 vs. TAIR 10
Match: AT1G70650.1 (Ran BP2/NZF zinc finger-like superfamily protein )

HSP 1 Score: 53.1 bits (126), Expect = 1.9e-07
Identity = 28/92 (30.43%), Postives = 39/92 (42.39%), Query Frame = 0 

Query: 8   RPGDWNCRSCNHLNFQRRDSCQRCGDPRADFGGGFGGGRVGSSSFGFTTGPDVRPGDWYC 67
           + GDW C++CN LNF +   C RC D                      T   + PG+W C
Sbjct: 279 KKGDWICQTCNFLNFSKNTRCLRCKDK--------------------PTLRQINPGEWEC 338

Query: 68  AVANCGAHNFASRSICFKCGASKDEASSAAYD 100
              +C   NF   SIC KC   + +A++   D
Sbjct: 339 --ESCNYINFRRNSICLKCDHKRQKAANVTPD 348

The following BLAST results are available for this feature:
BLAST of Lcy01g014940 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O138015.6e-0931.65Uncharacterized RNA-binding protein C17H9.04c OS=Schizosaccharomyces pombe (stra... [more]
Q272941.0e-0532.46RNA-binding protein cabeza OS=Drosophila melanogaster OX=7227 GN=caz PE=2 SV=2[more]
P327702.5e-0466.67Asparagine-rich protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)... [more]
Q5ZLX55.5e-0434.48Zinc finger Ran-binding domain-containing protein 2 OS=Gallus gallus OX=9031 GN=... [more]
BLAST of Lcy01g014940 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KQR01.2e-6594.35uncharacterized RNA-binding protein C17H9.04c-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1GJE49.8e-6593.55TATA-binding protein-associated factor 2N-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A0A0LLW71.3e-6493.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G380050 PE=4 SV=1[more]
A0A1S3BBL41.3e-6493.60uncharacterized RNA-binding protein C17H9.04c OS=Cucumis melo OX=3656 GN=LOC1034... [more]
A0A6J1BUS63.5e-6288.80uncharacterized RNA-binding protein C17H9.04c-like OS=Momordica charantia OX=367... [more]
BLAST of Lcy01g014940 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023002539.12.4e-6594.35uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita maxima][more]
KAG6585459.12.4e-6594.35Peptidyl-prolyl cis-trans isomerase CYP95, partial [Cucurbita argyrosperma subsp... [more]
KAG7020377.15.3e-6593.55SPAC17H9.04c [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023538151.11.2e-6493.55uncharacterized RNA-binding protein C17H9.04c-like [Cucurbita pepo subsp. pepo][more]
XP_022951649.12.0e-6493.55TATA-binding protein-associated factor 2N-like [Cucurbita moschata][more]
BLAST of Lcy01g014940 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G15680.16.8e-4261.87Ran BP2/NZF zinc finger-like superfamily protein [more]
AT5G25490.13.4e-4161.97Ran BP2/NZF zinc finger-like superfamily protein [more]
AT2G26695.15.8e-2543.70Ran BP2/NZF zinc finger-like superfamily protein [more]
AT2G17975.14.0e-1033.10zinc finger (Ran-binding) family protein [more]
AT1G70650.11.9e-0730.43Ran BP2/NZF zinc finger-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001876Zinc finger, RanBP2-typeSMARTSM00547zf_4coord: 63..89
e-value: 4.4E-7
score: 39.5
coord: 10..34
e-value: 7.3E-6
score: 35.5
IPR001876Zinc finger, RanBP2-typePFAMPF00641zf-RanBPcoord: 8..34
e-value: 4.8E-4
score: 19.4
coord: 61..90
e-value: 4.8E-6
score: 25.8
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 12..31
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 65..86
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 8..37
score: 9.969523
IPR001876Zinc finger, RanBP2-typePROSITEPS50199ZF_RANBP2_2coord: 61..92
score: 9.980816
NoneNo IPR availableGENE3D4.10.1060.10coord: 5..37
e-value: 3.2E-11
score: 44.3
coord: 56..93
e-value: 1.2E-13
score: 52.0
NoneNo IPR availablePANTHERPTHR23111ZINC FINGER PROTEINcoord: 6..128
NoneNo IPR availablePANTHERPTHR23111:SF26RAN BP2/NZF ZINC FINGER-LIKE SUPERFAMILY PROTEINcoord: 6..128
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 6..36
IPR036443Zinc finger, RanBP2-type superfamilySUPERFAMILY90209Ran binding protein zinc finger-likecoord: 57..93

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g014940.1Lcy01g014940.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding