Lcy01g013210 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g013210
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	YqaJ domain-containing protein
Location	Chr01: 34465292 .. 34466239 (+)
RNA-Seq Expression	Lcy01g013210
Synteny	Lcy01g013210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCTTTTCGTTAGAAGTTTGAATGACGGTAGAAACTTCATCAGTCAGAAATCATCATCTGTGTCCAGTTGCAGAATGATATCTGCCAGTTCCAGTAGTTGTCAAGCTATTGGGAACCGGCCTAGATGTCATTTGAATTCTGATTCTTCTTTAAAATTTGATACAGGTAGTTGTTATTCTGTTCTTCAGTCCAGTAGTTTTCAGCATTGGTTCAAAAATTGGAAAGAACTTAGAAAGCATAAGTTGACAGCGAGTACTTTTGCTGGGGCTGTAGGGTTTTGGCCTCGTCGGAGGGCTCAATTATGGTTAGAGAAGCTTGGGGCAATTGGGCAGTTTTGTGGTAATCTAGCAACTTGTTGGAGCAACATTAAAGAAGAAGAGGCACTTGAAAGATATAAACTTATAACAGGAAACACTGTCTTGTTTCCTGAATTTCAAGTCTATGGTAGAGAAAACTCTGAAGATGATTGGTTAGCTGCTTCACCTGATGGTACAATTGACAAGATGGTTTATGGATTGCCTTCACGAGGGGTTTTGGAGATCAAGTGTCCATTTTTTGGTGGTGATATGAGAAAGGCTTCACCATGGTCACGAGTTCCTCTTTACTCTATTCCTCAAGCTCAAGGTTTGATGGAAATAATGGATAGAGATTCGATGGATTTTTATGTTTGGACTCCAAAAGGTAGTAGTTTATTTAGAGTGTATCGAGATGCCGAATACTGGGAGGTCTTGAAAATGGCTCTGTATGATTTTTGGTGGAAGCATGTTCAACCAGCACGGGATTTGTGTAGTAAATATGCCATTACAAATCCTCTCATTGAGCTAAAATCACTTAGGCCATCTCCCAGGCATGAATTATGTAGTTATATTGTTTGTGAAAGTAAACGTGTTGTTGATAATTCTAAGTTGCTCTTGCGTGAGCTTGATGGGAGACTTCAAACTTGA

mRNA sequence

ATGAGCCTTTTCGTTAGAAGTTTGAATGACGGTAGAAACTTCATCAGTCAGAAATCATCATCTGTGTCCAGTTGCAGAATGATATCTGCCAGTTCCAGTAGTTGTCAAGCTATTGGGAACCGGCCTAGATGTCATTTGAATTCTGATTCTTCTTTAAAATTTGATACAGGTAGTTGTTATTCTGTTCTTCAGTCCAGTAGTTTTCAGCATTGGTTCAAAAATTGGAAAGAACTTAGAAAGCATAAGTTGACAGCGAGTACTTTTGCTGGGGCTGTAGGGTTTTGGCCTCGTCGGAGGGCTCAATTATGGTTAGAGAAGCTTGGGGCAATTGGGCAGTTTTGTGGTAATCTAGCAACTTGTTGGAGCAACATTAAAGAAGAAGAGGCACTTGAAAGATATAAACTTATAACAGGAAACACTGTCTTGTTTCCTGAATTTCAAGTCTATGGTAGAGAAAACTCTGAAGATGATTGGTTAGCTGCTTCACCTGATGGTACAATTGACAAGATGGTTTATGGATTGCCTTCACGAGGGGTTTTGGAGATCAAGTGTCCATTTTTTGGTGGTGATATGAGAAAGGCTTCACCATGGTCACGAGTTCCTCTTTACTCTATTCCTCAAGCTCAAGGTTTGATGGAAATAATGGATAGAGATTCGATGGATTTTTATGTTTGGACTCCAAAAGGTAGTAGTTTATTTAGAGTGTATCGAGATGCCGAATACTGGGAGGTCTTGAAAATGGCTCTGTATGATTTTTGGTGGAAGCATGTTCAACCAGCACGGGATTTGTGTAGTAAATATGCCATTACAAATCCTCTCATTGAGCTAAAATCACTTAGGCCATCTCCCAGGCATGAATTATGTAGTTATATTGTTTGTGAAAGTAAACGTGTTGTTGATAATTCTAAGTTGCTCTTGCGTGAGCTTGATGGGAGACTTCAAACTTGA

Coding sequence (CDS)

ATGAGCCTTTTCGTTAGAAGTTTGAATGACGGTAGAAACTTCATCAGTCAGAAATCATCATCTGTGTCCAGTTGCAGAATGATATCTGCCAGTTCCAGTAGTTGTCAAGCTATTGGGAACCGGCCTAGATGTCATTTGAATTCTGATTCTTCTTTAAAATTTGATACAGGTAGTTGTTATTCTGTTCTTCAGTCCAGTAGTTTTCAGCATTGGTTCAAAAATTGGAAAGAACTTAGAAAGCATAAGTTGACAGCGAGTACTTTTGCTGGGGCTGTAGGGTTTTGGCCTCGTCGGAGGGCTCAATTATGGTTAGAGAAGCTTGGGGCAATTGGGCAGTTTTGTGGTAATCTAGCAACTTGTTGGAGCAACATTAAAGAAGAAGAGGCACTTGAAAGATATAAACTTATAACAGGAAACACTGTCTTGTTTCCTGAATTTCAAGTCTATGGTAGAGAAAACTCTGAAGATGATTGGTTAGCTGCTTCACCTGATGGTACAATTGACAAGATGGTTTATGGATTGCCTTCACGAGGGGTTTTGGAGATCAAGTGTCCATTTTTTGGTGGTGATATGAGAAAGGCTTCACCATGGTCACGAGTTCCTCTTTACTCTATTCCTCAAGCTCAAGGTTTGATGGAAATAATGGATAGAGATTCGATGGATTTTTATGTTTGGACTCCAAAAGGTAGTAGTTTATTTAGAGTGTATCGAGATGCCGAATACTGGGAGGTCTTGAAAATGGCTCTGTATGATTTTTGGTGGAAGCATGTTCAACCAGCACGGGATTTGTGTAGTAAATATGCCATTACAAATCCTCTCATTGAGCTAAAATCACTTAGGCCATCTCCCAGGCATGAATTATGTAGTTATATTGTTTGTGAAAGTAAACGTGTTGTTGATAATTCTAAGTTGCTCTTGCGTGAGCTTGATGGGAGACTTCAAACTTGA

Protein sequence

MSLFVRSLNDGRNFISQKSSSVSSCRMISASSSSCQAIGNRPRCHLNSDSSLKFDTGSCYSVLQSSSFQHWFKNWKELRKHKLTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATCWSNIKEEEALERYKLITGNTVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLEIKCPFFGGDMRKASPWSRVPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEYWEVLKMALYDFWWKHVQPARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDNSKLLLRELDGRLQT

Homology

[Close]

BLAST of Lcy01g013210 vs. ExPASy TrEMBL
Match: A0A6J1D9D0 (uncharacterized protein LOC111018568 OS=Momordica charantia OX=3673 GN=LOC111018568 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 9.9e-151
Identity = 264/315 (83.81%), Postives = 281/315 (89.21%), Query Frame = 0


Query: 1   MSLFVRSLNDGRNFISQKSSSVSSCRMISASSSSCQAIGNRPRCHLNSDSSLKFDTGSCY 60
           M L  RSLN+ RNF SQ+ SSVS CR   A        GNRP C+LNS  SL+F+TG+ +
Sbjct: 1   MGLLGRSLNNCRNFSSQE-SSVSRCRNTFA--------GNRPGCNLNS-HSLRFETGNYH 60

Query: 61  SVLQSSSFQHWFKNWKELRKHKLTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATC 120
           SVLQSSSFQHWFKNW+ELRKHKLTASTFAGA+GFWPRRRAQLWLEKLGAI QF G LATC
Sbjct: 61  SVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIEQFSGTLATC 120

Query: 121 WSNIKEEEALERYKLITGNTVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVL 180
           WSN KEEEALERYKLITGNTVLFPEFQVYG+ NSEDDWLAASPDG IDK+V+GLPSRGVL
Sbjct: 121 WSNNKEEEALERYKLITGNTVLFPEFQVYGKVNSEDDWLAASPDGAIDKIVHGLPSRGVL 180

Query: 181 EIKCPFFGGDMRKASPWSRVPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAE 240
           EIKCPFF GDMRKASPWSRVPLYSIPQAQGLMEIMDRD MDFYVWTPKGSSLFR+YRD E
Sbjct: 181 EIKCPFFDGDMRKASPWSRVPLYSIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDVE 240

Query: 241 YWEVLKMALYDFWWKHVQPARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVD 300
           YWEVLKMAL DFWWKHVQPAR+ CSKYAITNPLIELKSLRPSPRHELCSYIVCESKR+VD
Sbjct: 241 YWEVLKMALSDFWWKHVQPAREFCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRIVD 300

Query: 301 NSKLLLRELDGRLQT 316
           NSKL+LRE DG+LQT
Sbjct: 301 NSKLILREFDGKLQT 305

[Close]

BLAST of Lcy01g013210 vs. ExPASy TrEMBL
Match: A0A6J1J2F9 (uncharacterized protein LOC111480647 OS=Cucurbita maxima OX=3661 GN=LOC111480647 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 4.0e-144
Identity = 248/296 (83.78%), Postives = 266/296 (89.86%), Query Frame = 0


Query: 24  SCRMISASSSSCQAIGNRPRCHLN----SDSSLKFDTGSCYSVLQSSSFQHWFKNWKELR 83
           +C+ I A +   Q I N  RC+ N    S SS KF+TG+ YSVLQSSSFQHWFKNWKELR
Sbjct: 3   NCKNIFART---QTIRNWSRCNFNSASSSSSSFKFETGNYYSVLQSSSFQHWFKNWKELR 62

Query: 84  KHKLTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATCWSNIKEEEALERYKLITGN 143
           KHKLTASTFAGA+GFWPRRRAQLWLEKLGAI QF GNLATCWSN+KEEEALERYKLITGN
Sbjct: 63  KHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLITGN 122

Query: 144 TVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLEIKCPFFGGDMRKASPWSR 203
           +VLFPEFQVYG+ NSE DWLAASPDG IDKMVYGLPSRGVLEIKCPFF GDM KASPWSR
Sbjct: 123 SVLFPEFQVYGKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMEKASPWSR 182

Query: 204 VPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEYWEVLKMALYDFWWKHVQP 263
           VPLY IPQ QGLMEIMDRD MDFYVWTPKGSSLFR+YRDAEYWEVLK+AL DFWWKHVQP
Sbjct: 183 VPLYCIPQVQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHVQP 242

Query: 264 ARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDNSKLLLRELDGRLQT 316
           AR++CSKY+ITNPLIELKSLRPSP+HELCSYIVCESKRVVDNS+LLLRE +GRLQT
Sbjct: 243 AREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 295

[Close]

BLAST of Lcy01g013210 vs. ExPASy TrEMBL
Match: A0A0A0K4T5 (YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G302370 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 5.8e-143
Identity = 246/300 (82.00%), Postives = 268/300 (89.33%), Query Frame = 0


Query: 18  KSSSVSSCRMISASSSSCQAIGNRPRCHLN--SDSSLKFDTGSCYSVLQSSSFQHWFKNW 77
           +  S+ +C+ I  + S  QAIGN    + N  S SSL+F+T + YSVLQS+SFQHWFKNW
Sbjct: 5   EKQSMFNCKKILFACS--QAIGNCSIRNFNSVSSSSLQFETVNHYSVLQSTSFQHWFKNW 64

Query: 78  KELRKHKLTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATCWSNIKEEEALERYKL 137
           +ELRKHKLTASTFAGA+GFWPRRR QLWLEKLGAI QFCGNLATCWSN+KEEEALERYKL
Sbjct: 65  QELRKHKLTASTFAGAIGFWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKL 124

Query: 138 ITGNTVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLEIKCPFFGGDMRKAS 197
           ITGN+VLFPEFQVYG+ NSEDDWLAASPDG IDKMVYGLPSRGVLEIKCPFF GDMR AS
Sbjct: 125 ITGNSVLFPEFQVYGKANSEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDMRNAS 184

Query: 198 PWSRVPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEYWEVLKMALYDFWWK 257
           PWSRVPLY IPQAQGLMEIMDRD MDFYVWTP GSSLFR+YRD EYW+VLK+AL DFWWK
Sbjct: 185 PWSRVPLYCIPQAQGLMEIMDRDWMDFYVWTPNGSSLFRLYRDVEYWDVLKIALSDFWWK 244

Query: 258 HVQPARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDNSKLLLRELDGRLQT 316
           HVQPAR++CSKY +TNPLIELKSLRPSPRHELCSYIVCESKRVV+NSKLLLRE DGRLQT
Sbjct: 245 HVQPAREMCSKYVVTNPLIELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 302

[Close]

BLAST of Lcy01g013210 vs. ExPASy TrEMBL
Match: A0A6J1EKA9 (uncharacterized protein LOC111433377 OS=Cucurbita moschata OX=3662 GN=LOC111433377 PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 7.6e-143
Identity = 247/298 (82.89%), Postives = 265/298 (88.93%), Query Frame = 0


Query: 24  SCRMISASSSSCQAIGNRPRCHLN------SDSSLKFDTGSCYSVLQSSSFQHWFKNWKE 83
           +C+ I A +   Q I N  RC+ N      S SS KF+TG+ YSVLQSSSFQHWFKNWKE
Sbjct: 3   NCKNIFART---QTIRNWSRCNFNSASSSSSSSSFKFETGNYYSVLQSSSFQHWFKNWKE 62

Query: 84  LRKHKLTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATCWSNIKEEEALERYKLIT 143
            RKHKLTASTFAGA+GFWPRRRAQLWLEKLGAI QF GNLATCWSN+KEEEALERYKLIT
Sbjct: 63  FRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLIT 122

Query: 144 GNTVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLEIKCPFFGGDMRKASPW 203
           GN+VLFPEFQVY + NSE DWLAASPDG IDKMVYGLPSRGVLEIKCPFF GDM KASPW
Sbjct: 123 GNSVLFPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPW 182

Query: 204 SRVPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEYWEVLKMALYDFWWKHV 263
           SRVPLY IPQAQGLMEIMDRD MDFYVWTPKGSSLFR+YRDAEYWEVLK+AL DFWWKHV
Sbjct: 183 SRVPLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHV 242

Query: 264 QPARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDNSKLLLRELDGRLQT 316
           QPAR++CSKY+ITNPLIELKSLRPSP+HELCSYIVCESKRVVDNS+LLLRE +GRLQT
Sbjct: 243 QPAREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 297

[Close]

BLAST of Lcy01g013210 vs. ExPASy TrEMBL
Match: A0A0A0KG47 (YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G405910 PE=4 SV=1)

HSP 1 Score: 515.8 bits (1327), Expect = 1.3e-142
Identity = 241/282 (85.46%), Postives = 258/282 (91.49%), Query Frame = 0


Query: 36  QAIGNRPRCHLN--SDSSLKFDTGSCYSVLQSSSFQHWFKNWKELRKHKLTASTFAGAVG 95
           QAIGN    + N  S SSL+F+TG+ YSVLQSSSFQHWFKNW+ELRKHKLTASTFAGA+G
Sbjct: 13  QAIGNCSLRNFNSVSFSSLQFETGNHYSVLQSSSFQHWFKNWQELRKHKLTASTFAGAIG 72

Query: 96  FWPRRRAQLWLEKLGAIGQFCGNLATCWSNIKEEEALERYKLITGNTVLFPEFQVYGREN 155
           FWPRRR QLWLEKLGAI QFCGNLATCWSN+KEEEALERYKLITGN+VLFPEFQVYG+ N
Sbjct: 73  FWPRRRTQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNSVLFPEFQVYGKAN 132

Query: 156 SEDDWLAASPDGTIDKMVYGLPSRGVLEIKCPFFGGDMRKASPWSRVPLYSIPQAQGLME 215
           SEDDWLAASPDG IDKMVYGLPSRGVLEIKCPFF GD+R A PWSRVP Y IPQAQGLME
Sbjct: 133 SEDDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFNGDLRNALPWSRVPRYCIPQAQGLME 192

Query: 216 IMDRDSMDFYVWTPKGSSLFRVYRDAEYWEVLKMALYDFWWKHVQPARDLCSKYAITNPL 275
           IMDRD MDFYVWTP GSSLFR+YRD EYW+VLK+AL DFWWKHVQPAR++CSKY ITNPL
Sbjct: 193 IMDRDWMDFYVWTPNGSSLFRLYRDPEYWDVLKIALSDFWWKHVQPAREMCSKYVITNPL 252

Query: 276 IELKSLRPSPRHELCSYIVCESKRVVDNSKLLLRELDGRLQT 316
           +ELKSLRPSPRHELCSYIVCESKRVV+NSKLLLRE DGRLQT
Sbjct: 253 VELKSLRPSPRHELCSYIVCESKRVVNNSKLLLREFDGRLQT 294

[Close]

BLAST of Lcy01g013210 vs. NCBI nr
Match: XP_022150402.1 (uncharacterized protein LOC111018568 [Momordica charantia] >XP_022150403.1 uncharacterized protein LOC111018568 [Momordica charantia] >XP_022150404.1 uncharacterized protein LOC111018568 [Momordica charantia] >XP_022150405.1 uncharacterized protein LOC111018568 [Momordica charantia])

HSP 1 Score: 542.7 bits (1397), Expect = 2.0e-150
Identity = 264/315 (83.81%), Postives = 281/315 (89.21%), Query Frame = 0


Query: 1   MSLFVRSLNDGRNFISQKSSSVSSCRMISASSSSCQAIGNRPRCHLNSDSSLKFDTGSCY 60
           M L  RSLN+ RNF SQ+ SSVS CR   A        GNRP C+LNS  SL+F+TG+ +
Sbjct: 1   MGLLGRSLNNCRNFSSQE-SSVSRCRNTFA--------GNRPGCNLNS-HSLRFETGNYH 60

Query: 61  SVLQSSSFQHWFKNWKELRKHKLTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATC 120
           SVLQSSSFQHWFKNW+ELRKHKLTASTFAGA+GFWPRRRAQLWLEKLGAI QF G LATC
Sbjct: 61  SVLQSSSFQHWFKNWQELRKHKLTASTFAGAIGFWPRRRAQLWLEKLGAIEQFSGTLATC 120

Query: 121 WSNIKEEEALERYKLITGNTVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVL 180
           WSN KEEEALERYKLITGNTVLFPEFQVYG+ NSEDDWLAASPDG IDK+V+GLPSRGVL
Sbjct: 121 WSNNKEEEALERYKLITGNTVLFPEFQVYGKVNSEDDWLAASPDGAIDKIVHGLPSRGVL 180

Query: 181 EIKCPFFGGDMRKASPWSRVPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAE 240
           EIKCPFF GDMRKASPWSRVPLYSIPQAQGLMEIMDRD MDFYVWTPKGSSLFR+YRD E
Sbjct: 181 EIKCPFFDGDMRKASPWSRVPLYSIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDVE 240

Query: 241 YWEVLKMALYDFWWKHVQPARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVD 300
           YWEVLKMAL DFWWKHVQPAR+ CSKYAITNPLIELKSLRPSPRHELCSYIVCESKR+VD
Sbjct: 241 YWEVLKMALSDFWWKHVQPAREFCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRIVD 300

Query: 301 NSKLLLRELDGRLQT 316
           NSKL+LRE DG+LQT
Sbjct: 301 NSKLILREFDGKLQT 305

[Close]

BLAST of Lcy01g013210 vs. NCBI nr
Match: XP_038900094.1 (uncharacterized protein LOC120087241 [Benincasa hispida] >XP_038900095.1 uncharacterized protein LOC120087241 [Benincasa hispida])

HSP 1 Score: 523.1 bits (1346), Expect = 1.7e-144
Identity = 247/294 (84.01%), Postives = 266/294 (90.48%), Query Frame = 0


Query: 24  SCRMISASSSSCQAIGNRPRCHLN---SDSSLKFDTGSCYSVLQSSSFQHWFKNWKELRK 83
           +C+ I A S   QAIGN    + N   S S+LKF+TG+ YS+LQSSSFQHWFKNW ELRK
Sbjct: 3   NCKKIFACS---QAIGNWSIRNFNSAASSSALKFETGNHYSILQSSSFQHWFKNWNELRK 62

Query: 84  HKLTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATCWSNIKEEEALERYKLITGNT 143
           HKLTASTFAGA+GFWPRRRAQLWLEKLGAI QFCGNLATCWSN+KEEEALERYKLITGN+
Sbjct: 63  HKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFCGNLATCWSNMKEEEALERYKLITGNS 122

Query: 144 VLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLEIKCPFFGGDMRKASPWSRV 203
           VLFPEFQVYG+ NS DDWLAASPDG IDKM+YGLPSRGVLEIKCPFF GDMRKASPWSR+
Sbjct: 123 VLFPEFQVYGKANSVDDWLAASPDGAIDKMIYGLPSRGVLEIKCPFFDGDMRKASPWSRI 182

Query: 204 PLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEYWEVLKMALYDFWWKHVQPA 263
           PLY IPQAQGLMEIMDRD MDFYVWTPKGSSLFR+YRD EYW+VLK+AL DFWWKHVQPA
Sbjct: 183 PLYCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDVEYWDVLKIALSDFWWKHVQPA 242

Query: 264 RDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDNSKLLLRELDGRLQ 315
           R++CSKYAI NPLIELKSLRPSP+HELCSYIVCESKRVVDNSKLLLRE DGRLQ
Sbjct: 243 REMCSKYAINNPLIELKSLRPSPKHELCSYIVCESKRVVDNSKLLLREFDGRLQ 293

[Close]

BLAST of Lcy01g013210 vs. NCBI nr
Match: XP_022981568.1 (uncharacterized protein LOC111480647 [Cucurbita maxima])

HSP 1 Score: 520.8 bits (1340), Expect = 8.3e-144
Identity = 248/296 (83.78%), Postives = 266/296 (89.86%), Query Frame = 0


Query: 24  SCRMISASSSSCQAIGNRPRCHLN----SDSSLKFDTGSCYSVLQSSSFQHWFKNWKELR 83
           +C+ I A +   Q I N  RC+ N    S SS KF+TG+ YSVLQSSSFQHWFKNWKELR
Sbjct: 3   NCKNIFART---QTIRNWSRCNFNSASSSSSSFKFETGNYYSVLQSSSFQHWFKNWKELR 62

Query: 84  KHKLTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATCWSNIKEEEALERYKLITGN 143
           KHKLTASTFAGA+GFWPRRRAQLWLEKLGAI QF GNLATCWSN+KEEEALERYKLITGN
Sbjct: 63  KHKLTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLITGN 122

Query: 144 TVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLEIKCPFFGGDMRKASPWSR 203
           +VLFPEFQVYG+ NSE DWLAASPDG IDKMVYGLPSRGVLEIKCPFF GDM KASPWSR
Sbjct: 123 SVLFPEFQVYGKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMEKASPWSR 182

Query: 204 VPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEYWEVLKMALYDFWWKHVQP 263
           VPLY IPQ QGLMEIMDRD MDFYVWTPKGSSLFR+YRDAEYWEVLK+AL DFWWKHVQP
Sbjct: 183 VPLYCIPQVQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHVQP 242

Query: 264 ARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDNSKLLLRELDGRLQT 316
           AR++CSKY+ITNPLIELKSLRPSP+HELCSYIVCESKRVVDNS+LLLRE +GRLQT
Sbjct: 243 AREMCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 295

[Close]

BLAST of Lcy01g013210 vs. NCBI nr
Match: XP_023522491.1 (uncharacterized protein LOC111786473 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 519.2 bits (1336), Expect = 2.4e-143
Identity = 248/293 (84.64%), Postives = 264/293 (90.10%), Query Frame = 0


Query: 23  SSCRMISASSSSCQAIGNRPRCHLNSDSSLKFDTGSCYSVLQSSSFQHWFKNWKELRKHK 82
           S C   SASSSS  +         +S SS KF+TG+ YSVLQSSSFQHWFKNWKELRKHK
Sbjct: 18  SRCNFNSASSSSSSS--------SSSSSSFKFETGNYYSVLQSSSFQHWFKNWKELRKHK 77

Query: 83  LTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATCWSNIKEEEALERYKLITGNTVL 142
           LTASTFAGA+GFWPRRRAQLWLEKLGAI QF GNLATCWSN+KEEEALERYKLITGN+VL
Sbjct: 78  LTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLITGNSVL 137

Query: 143 FPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLEIKCPFFGGDMRKASPWSRVPL 202
           FPEFQVY + NSE DWLAASPDG IDKMVYGLPSRGVLEIKCPFF GDM KASPWSRVPL
Sbjct: 138 FPEFQVYEKGNSEYDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMAKASPWSRVPL 197

Query: 203 YSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEYWEVLKMALYDFWWKHVQPARD 262
           Y IPQAQGLMEIMDRD MDFYVWTPKGSSLFR+YRDAEYWEVLK+ALYDFWWKHVQPAR+
Sbjct: 198 YCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALYDFWWKHVQPARE 257

Query: 263 LCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDNSKLLLRELDGRLQT 316
           +CSKY+ITNPLIELKSLRPSP+HELCSYIVCESKRVVDNS+LLLRE +GRLQT
Sbjct: 258 MCSKYSITNPLIELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 302

[Close]

BLAST of Lcy01g013210 vs. NCBI nr
Match: KAG6607651.1 (hypothetical protein SDJN03_00993, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037253.1 hypothetical protein SDJN02_00876, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 517.3 bits (1331), Expect = 9.2e-143
Identity = 246/293 (83.96%), Postives = 264/293 (90.10%), Query Frame = 0


Query: 23  SSCRMISASSSSCQAIGNRPRCHLNSDSSLKFDTGSCYSVLQSSSFQHWFKNWKELRKHK 82
           S C   SASSSS  +         +S SS KF+TG+ YSVLQSSSFQHWFKNWKELRKHK
Sbjct: 18  SRCNFNSASSSSSSSSS-------SSSSSFKFETGNYYSVLQSSSFQHWFKNWKELRKHK 77

Query: 83  LTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATCWSNIKEEEALERYKLITGNTVL 142
           LTASTFAGA+GFWPRRRAQLWLEKLGAI QF GNLATCWSN+KEEEALERYKLITGN+VL
Sbjct: 78  LTASTFAGAIGFWPRRRAQLWLEKLGAIDQFSGNLATCWSNMKEEEALERYKLITGNSVL 137

Query: 143 FPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLEIKCPFFGGDMRKASPWSRVPL 202
           FPEFQVYG+ NSE DWLAASPDG IDKMVYGLPSRGVLEIKCPFF GDM +ASPWSRVPL
Sbjct: 138 FPEFQVYGKGNSECDWLAASPDGAIDKMVYGLPSRGVLEIKCPFFDGDMGRASPWSRVPL 197

Query: 203 YSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEYWEVLKMALYDFWWKHVQPARD 262
           Y IPQAQGLMEIMDRD MDFYVWTPKGSSLFR+YRDAEYWEVLK+AL DFWWKHVQPAR+
Sbjct: 198 YCIPQAQGLMEIMDRDWMDFYVWTPKGSSLFRLYRDAEYWEVLKIALSDFWWKHVQPARE 257

Query: 263 LCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDNSKLLLRELDGRLQT 316
           +CSKY+ITNPL+ELKSLRPSP+HELCSYIVCESKRVVDNS+LLLRE +GRLQT
Sbjct: 258 MCSKYSITNPLVELKSLRPSPKHELCSYIVCESKRVVDNSELLLREFNGRLQT 303

[Close]

BLAST of Lcy01g013210 vs. TAIR 10
Match: AT1G13810.1 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 268.9 bits (686), Expect = 5.3e-72
Identity = 126/254 (49.61%), Postives = 167/254 (65.75%), Query Frame = 0


Query: 61  SVLQSSSFQHWFKNWKELRKHKLTASTFAGAVGFWPRRRAQLWLEKLGAIGQFCGNLATC 120
           +V+ +    HW KNW++LRK++LTAS FA A+GF P  R  LWLEK+GA   F GN AT 
Sbjct: 48  AVVVTEPTHHWRKNWEDLRKNRLTASNFARAIGFSPDGRRNLWLEKIGAAKPFAGNRATF 107

Query: 121 WSNIKEEEALERYKLITGNTVLFPEFQVY-GRENSEDDWLAASPDGTIDKMVYGLPSRGV 180
           W    E EALERY  +TGN +L PEF VY   E+ E++WL ASPDG I+ +  G+ S GV
Sbjct: 108 WDIENEVEALERYNELTGNEILIPEFVVYKNGESPEENWLGASPDGVINVVKDGVTSCGV 167

Query: 181 LEIKCPFFGGDMRKASPWSRVPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDA 240
           LE+KCPF   D  K  PW +VP   +PQ QGLMEI+D D +D Y WT  GSSLFRV+RD 
Sbjct: 168 LEVKCPFDNRDNSKVYPWKKVPYNCVPQLQGLMEIVDTDWLDLYCWTRNGSSLFRVWRDT 227

Query: 241 EYWEVLKMALYDFWWKHVQPARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVV 300
            +WE +K AL+DFW  HV PAR++ + + I +P ++L+  +P   HE C  I+  ++R+ 
Sbjct: 228 AFWEDMKPALFDFWQNHVLPAREIYNNFDIKDPQVKLREFKPKHWHEDCKKIMRGAERIS 287

Query: 301 DNSKLLLRELDGRL 314
            N+  L  E+DG L
Sbjct: 288 ANANRLFYEIDGNL 301

[Close]

BLAST of Lcy01g013210 vs. TAIR 10
Match: AT1G67660.1 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 9.5e-45
Identity = 109/308 (35.39%), Postives = 154/308 (50.00%), Query Frame = 0


Query: 7   SLNDGRNFISQKSSSVSSCRMISASSSSCQAIGNRPRCHLNSDSSLKFDTGSCYSVLQSS 66
           S++     + + S SVSS +  S+++ S       P  H  S   +        S+L  S
Sbjct: 60  SISGFHTHLPKSSGSVSSRKRFSSTALSLITQTISPFAHPRSSVIVS-------SLLSPS 119

Query: 67  SFQHWFKNWKELRKHKLTASTFAGAVGFWP-RRRAQLWLEKL----GAIGQFCGNLATCW 126
                 + W  LRK KLT STF+ A+GFW   RRA+LW EK+      + +     A  W
Sbjct: 120 DIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESARFAMNW 179

Query: 127 SNIKEEEALERYKLITGNTVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLE 186
               E  A+ERYK I G  V    F ++   N E  WL ASPDG +D         G+LE
Sbjct: 180 GVQMESSAIERYKRIMGCEVGTMGFAIH--SNEEFHWLGASPDGILDCF-------GILE 239

Query: 187 IKCPFFGGDMRKASPWSRVPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEY 246
           +KCP+  G      PW +VP Y +PQ QG MEIMDR+ ++ Y WT  GS++FRV RD  Y
Sbjct: 240 VKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRVMRDRSY 299

Query: 247 WEVLKMALYDFWWKHVQPARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDN 306
           W ++   L +FWW+ V PAR+      +     E+K   P+  H+     + +S  +   
Sbjct: 300 WRIIHDVLREFWWESVIPARE---ALLLGKEDEEVKKYEPTSTHKRTKLAIAKSLNLAAE 348

Query: 307 SKLLLREL 310
           SKL+ RE+
Sbjct: 360 SKLVCREI 348

[Close]

BLAST of Lcy01g013210 vs. TAIR 10
Match: AT1G67660.2 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 9.5e-45
Identity = 109/308 (35.39%), Postives = 154/308 (50.00%), Query Frame = 0


Query: 7   SLNDGRNFISQKSSSVSSCRMISASSSSCQAIGNRPRCHLNSDSSLKFDTGSCYSVLQSS 66
           S++     + + S SVSS +  S+++ S       P  H  S   +        S+L  S
Sbjct: 10  SISGFHTHLPKSSGSVSSRKRFSSTALSLITQTISPFAHPRSSVIVS-------SLLSPS 69

Query: 67  SFQHWFKNWKELRKHKLTASTFAGAVGFWP-RRRAQLWLEKL----GAIGQFCGNLATCW 126
                 + W  LRK KLT STF+ A+GFW   RRA+LW EK+      + +     A  W
Sbjct: 70  DIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESARFAMNW 129

Query: 127 SNIKEEEALERYKLITGNTVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLE 186
               E  A+ERYK I G  V    F ++   N E  WL ASPDG +D         G+LE
Sbjct: 130 GVQMESSAIERYKRIMGCEVGTMGFAIH--SNEEFHWLGASPDGILDCF-------GILE 189

Query: 187 IKCPFFGGDMRKASPWSRVPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEY 246
           +KCP+  G      PW +VP Y +PQ QG MEIMDR+ ++ Y WT  GS++FRV RD  Y
Sbjct: 190 VKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRVMRDRSY 249

Query: 247 WEVLKMALYDFWWKHVQPARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDN 306
           W ++   L +FWW+ V PAR+      +     E+K   P+  H+     + +S  +   
Sbjct: 250 WRIIHDVLREFWWESVIPARE---ALLLGKEDEEVKKYEPTSTHKRTKLAIAKSLNLAAE 298

Query: 307 SKLLLREL 310
           SKL+ RE+
Sbjct: 310 SKLVCREI 298

[Close]

BLAST of Lcy01g013210 vs. TAIR 10
Match: AT1G67660.3 (Restriction endonuclease, type II-like superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 9.5e-45
Identity = 109/308 (35.39%), Postives = 154/308 (50.00%), Query Frame = 0


Query: 7   SLNDGRNFISQKSSSVSSCRMISASSSSCQAIGNRPRCHLNSDSSLKFDTGSCYSVLQSS 66
           S++     + + S SVSS +  S+++ S       P  H  S   +        S+L  S
Sbjct: 39  SISGFHTHLPKSSGSVSSRKRFSSTALSLITQTISPFAHPRSSVIVS-------SLLSPS 98

Query: 67  SFQHWFKNWKELRKHKLTASTFAGAVGFWP-RRRAQLWLEKL----GAIGQFCGNLATCW 126
                 + W  LRK KLT STF+ A+GFW   RRA+LW EK+      + +     A  W
Sbjct: 99  DIPQKSEEWFALRKDKLTTSTFSTALGFWKGNRRAELWHEKVYDSDARVVEESARFAMNW 158

Query: 127 SNIKEEEALERYKLITGNTVLFPEFQVYGRENSEDDWLAASPDGTIDKMVYGLPSRGVLE 186
               E  A+ERYK I G  V    F ++   N E  WL ASPDG +D         G+LE
Sbjct: 159 GVQMESSAIERYKRIMGCEVGTMGFAIH--SNEEFHWLGASPDGILDCF-------GILE 218

Query: 187 IKCPFFGGDMRKASPWSRVPLYSIPQAQGLMEIMDRDSMDFYVWTPKGSSLFRVYRDAEY 246
           +KCP+  G      PW +VP Y +PQ QG MEIMDR+ ++ Y WT  GS++FRV RD  Y
Sbjct: 219 VKCPYNKGKTETVLPWKKVPYYYMPQLQGQMEIMDREWVNLYCWTRNGSTVFRVMRDRSY 278

Query: 247 WEVLKMALYDFWWKHVQPARDLCSKYAITNPLIELKSLRPSPRHELCSYIVCESKRVVDN 306
           W ++   L +FWW+ V PAR+      +     E+K   P+  H+     + +S  +   
Sbjct: 279 WRIIHDVLREFWWESVIPARE---ALLLGKEDEEVKKYEPTSTHKRTKLAIAKSLNLAAE 327

Query: 307 SKLLLREL 310
           SKL+ RE+
Sbjct: 339 SKLVCREI 327

The following BLAST results are available for this feature:

BLAST of Lcy01g013210 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g013210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9D0	9.9e-151	83.81	uncharacterized protein LOC111018568 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1J2F9	4.0e-144	83.78	uncharacterized protein LOC111480647 OS=Cucurbita maxima OX=3661 GN=LOC111480647...	[more]
A0A0A0K4T5	5.8e-143	82.00	YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G302370 PE=4 S...	[more]
A0A6J1EKA9	7.6e-143	82.89	uncharacterized protein LOC111433377 OS=Cucurbita moschata OX=3662 GN=LOC1114333...	[more]
A0A0A0KG47	1.3e-142	85.46	YqaJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G405910 PE=4 S...	[more]

BLAST of Lcy01g013210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150402.1	2.0e-150	83.81	uncharacterized protein LOC111018568 [Momordica charantia] >XP_022150403.1 uncha...	[more]
XP_038900094.1	1.7e-144	84.01	uncharacterized protein LOC120087241 [Benincasa hispida] >XP_038900095.1 unchara...	[more]
XP_022981568.1	8.3e-144	83.78	uncharacterized protein LOC111480647 [Cucurbita maxima]	[more]
XP_023522491.1	2.4e-143	84.64	uncharacterized protein LOC111786473 [Cucurbita pepo subsp. pepo]	[more]
KAG6607651.1	9.2e-143	83.96	hypothetical protein SDJN03_00993, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lcy01g013210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13810.1	5.3e-72	49.61	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.1	9.5e-45	35.39	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.2	9.5e-45	35.39	Restriction endonuclease, type II-like superfamily protein	[more]
AT1G67660.3	9.5e-45	35.39	Restriction endonuclease, type II-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011604	Exonuclease, phage-type/RecB, C-terminal	GENE3D	3.90.320.10		coord: 72..272 e-value: 3.9E-40 score: 139.7
IPR019080	YqaJ viral recombinase	PFAM	PF09588	YqaJ	coord: 74..216 e-value: 3.2E-15 score: 56.6
None	No IPR available	PANTHER	PTHR46609	EXONUCLEASE, PHAGE-TYPE/RECB, C-TERMINAL DOMAIN-CONTAINING PROTEIN	coord: 47..314
None	No IPR available	PANTHER	PTHR46609:SF4	RESTRICTION ENDONUCLEASE, TYPE II-LIKE SUPERFAMILY PROTEIN	coord: 47..314
IPR011335	Restriction endonuclease type II-like	SUPERFAMILY	52980	Restriction endonuclease-like	coord: 57..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g013210.1	Lcy01g013210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity