Lcy01g012760 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g012760
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Histone H3
Location	Chr01: 33985411 .. 33986568 (+)
RNA-Seq Expression	Lcy01g012760
Synteny	Lcy01g012760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATCGTGTCCATCCGCCGCCATACGACACGGGCTTTAGGCTCGGACCCCGGGAGGCCCCTATATAAAGAGCTTTGGTCTCCCATTCTTCTAATTCATTCGCATTTGAAAAAAAATCCCAATCTCTTCGAGGTCGATAATTCTCTCTCGGTTCTCCAGCCCTTCTTCATCGTCCAGGTTAGTTTCTCTTCGCCTCTTTAATCTTCTTTTTCTTTCTCTTTGAGTTGCTATGTTTGATTGATTTTTCCTTTCAATTTCATGCTGGAGGATTTGATTCATTTTCTCAAGTTCTTTCCGATAGAGATTATAATTGATGGCTAGGTTTAGTTATTTGGTTCTGAAATCGAACTTTGAGCTTTCTTGATGGACAAATCCTTAGAGACCTTTATATAATGGAAGAACAGTTGCCTCGAATTCGTAGGATTGTAGAACGACTATCGGATATTCATGTTCGTTCTAATAAAGTAACGGAGCGAAAACAAACTTTACATTGAAATTGTTTTAGCAATCTGTTTTGTTTTGATTGAATGGCGATATTTAATTTGCGTGACGTCGATGCAGATGGCTCGTACGAAGCAAACCGCTCGCAAATCCACCGGTGGTAAAGCCCCCAGAAAGCAGCTCGCTACTAAGGTATGAACAAGGAAGATTTGGAAACCTAGTTCTCAATTCTCATTTGTTTCCTGACCTAATATATCGTCACCAATAATTCTTTCAGGCTGCGCGTAAGTCGGCCCCAACTACTGGAGGCGTGAAGAAACCTCACAGATACCGTCCAGGAACCGTCGCTCTTCGGTATGTAACCTTATCTGATATTTGTCTTTGCCAACAGATCAACATTGGTTTCTTGTTTACATAAATCTCATGCCCTCTGCCGACGTATCGTTTTGCAGAGAAATCCGCAAGTACCAGAAGAGCACCGAGCTTCTAATCCGCAAGCTCCCATTCCAGAGGCTGGTTCGTGAAATCGCCCAGGATTTCAAGACAGATCTGCGTTTCCAGAGTCACGCGGTTTTGGCCCTGCAAGAGGCGGCCGAAGCTTACCTCGTTGGGCTGTTTGAAGACACCAACCTCTGCGCCATCCATGCCAAGCGCGTTACAATAATGCCCAAAGATATTCAACTTGCCAGAAGAATCCGCGGTGAAAGAGCTTAA

mRNA sequence

ATGTCAATCGTGTCCATCCGCCGCCATACGACACGGGCTTTAGGCTCGGACCCCGGGAGGCCCCTATATAAAGAGCTTTGGTCTCCCATTCTTCTAATTCATTCGCATTTGAAAAAAAATCCCAATCTCTTCGAGGTCGATAATTCTCTCTCGGTTCTCCAGCCCTTCTTCATCGTCCAGATGGCTCGTACGAAGCAAACCGCTCGCAAATCCACCGGTGGTAAAGCCCCCAGAAAGCAGCTCGCTACTAAGGCTGCGCGTAAGTCGGCCCCAACTACTGGAGGCGTGAAGAAACCTCACAGATACCGTCCAGGAACCGTCGCTCTTCGAGAAATCCGCAAGTACCAGAAGAGCACCGAGCTTCTAATCCGCAAGCTCCCATTCCAGAGGCTGGTTCGTGAAATCGCCCAGGATTTCAAGACAGATCTGCGTTTCCAGAGTCACGCGGTTTTGGCCCTGCAAGAGGCGGCCGAAGCTTACCTCGTTGGGCTGTTTGAAGACACCAACCTCTGCGCCATCCATGCCAAGCGCGTTACAATAATGCCCAAAGATATTCAACTTGCCAGAAGAATCCGCGGTGAAAGAGCTTAA

Coding sequence (CDS)

ATGTCAATCGTGTCCATCCGCCGCCATACGACACGGGCTTTAGGCTCGGACCCCGGGAGGCCCCTATATAAAGAGCTTTGGTCTCCCATTCTTCTAATTCATTCGCATTTGAAAAAAAATCCCAATCTCTTCGAGGTCGATAATTCTCTCTCGGTTCTCCAGCCCTTCTTCATCGTCCAGATGGCTCGTACGAAGCAAACCGCTCGCAAATCCACCGGTGGTAAAGCCCCCAGAAAGCAGCTCGCTACTAAGGCTGCGCGTAAGTCGGCCCCAACTACTGGAGGCGTGAAGAAACCTCACAGATACCGTCCAGGAACCGTCGCTCTTCGAGAAATCCGCAAGTACCAGAAGAGCACCGAGCTTCTAATCCGCAAGCTCCCATTCCAGAGGCTGGTTCGTGAAATCGCCCAGGATTTCAAGACAGATCTGCGTTTCCAGAGTCACGCGGTTTTGGCCCTGCAAGAGGCGGCCGAAGCTTACCTCGTTGGGCTGTTTGAAGACACCAACCTCTGCGCCATCCATGCCAAGCGCGTTACAATAATGCCCAAAGATATTCAACTTGCCAGAAGAATCCGCGGTGAAAGAGCTTAA

Protein sequence

MSIVSIRRHTTRALGSDPGRPLYKELWSPILLIHSHLKKNPNLFEVDNSLSVLQPFFIVQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Homology

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BLAST of Lcy01g012760 vs. ExPASy Swiss-Prot
Match: P59169 (Histone H3.3 OS=Arabidopsis thaliana OX=3702 GN=HTR4 PE=1 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 8.2e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 120
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 121 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 180
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 181 MPKDIQLARRIRGERA 197
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

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BLAST of Lcy01g012760 vs. ExPASy Swiss-Prot
Match: Q6RUR1 (Histone H3.3 OS=Capsicum annuum OX=4072 PE=2 SV=3)

HSP 1 Score: 258.1 bits (658), Expect = 8.2e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 120
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 121 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 180
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 181 MPKDIQLARRIRGERA 197
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Lcy01g012760 vs. ExPASy Swiss-Prot
Match: Q71V89 (Histone H3.3 OS=Gossypium hirsutum OX=3635 GN=HIS3 PE=2 SV=3)

HSP 1 Score: 258.1 bits (658), Expect = 8.2e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 120
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 121 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 180
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 181 MPKDIQLARRIRGERA 197
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Lcy01g012760 vs. ExPASy Swiss-Prot
Match: Q3C2E5 (Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 PE=2 SV=3)

HSP 1 Score: 258.1 bits (658), Expect = 8.2e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 120
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 121 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 180
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 181 MPKDIQLARRIRGERA 197
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Lcy01g012760 vs. ExPASy Swiss-Prot
Match: P69245 (Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 8.2e-68
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 120
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 121 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 180
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 181 MPKDIQLARRIRGERA 197
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

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BLAST of Lcy01g012760 vs. ExPASy TrEMBL
Match: A0A328E944 (Histone domain-containing protein OS=Cuscuta australis OX=267555 GN=DM860_006801 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.5e-67
Identity = 146/177 (82.49%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 20  RPLYKELWSPILLIHSHLKKNPNLFEVDNSLSVLQPFFIVQMARTKQTARKSTGGKAPRK 79
           RP+ + L+  ++L     +  P+L  V   L V     I  MARTKQTARKSTGGKAPRK
Sbjct: 165 RPIKRRLYISLILRLLRSRSKPSLQIVAVYLCV--GIVIGAMARTKQTARKSTGGKAPRK 224

Query: 80  QLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF 139
           QLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF
Sbjct: 225 QLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF 284

Query: 140 KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 197
           KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 285 KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 339

[Close]

BLAST of Lcy01g012760 vs. ExPASy TrEMBL
Match: A0A0D9VUT1 (Histone domain-containing protein OS=Leersia perrieri OX=77586 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 5.5e-67
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 56  FFIVQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKY 115
           FF++ MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKY
Sbjct: 159 FFLIIMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKY 218

Query: 116 QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 175
           QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA
Sbjct: 219 QKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHA 278

Query: 176 KRVTIMPKDIQLARRIRGERA 197
           KRVTIMPKDIQLARRIRGERA
Sbjct: 279 KRVTIMPKDIQLARRIRGERA 299

[Close]

BLAST of Lcy01g012760 vs. ExPASy TrEMBL
Match: A0A3Q7IQU4 (Histone domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.2e-66
Identity = 143/165 (86.67%), Postives = 149/165 (90.30%), Query Frame = 0


Query: 37  LKKNPNLFEVDNSLSVLQPFF-----IVQMARTKQTARKSTGGKAPRKQLATKAARKSAP 96
           L K P+ F  D+    +QP       +++MARTKQTARKSTGGKAPRKQLATKAARKSAP
Sbjct: 621 LPKLPDTFSPDS--ETVQPAIRRLARLLKMARTKQTARKSTGGKAPRKQLATKAARKSAP 680

Query: 97  TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVL 156
           TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVL
Sbjct: 681 TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVL 740

Query: 157 ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 197
           ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 741 ALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 783

[Close]

BLAST of Lcy01g012760 vs. ExPASy TrEMBL
Match: A0A6N2NE70 (Histone H3.2 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS487752 PE=3 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.2e-66
Identity = 139/155 (89.68%), Postives = 146/155 (94.19%), Query Frame = 0


Query: 42  NLFEVDNSLSVLQPFFIVQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 101
           NL++  ++ S  + +   +MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR
Sbjct: 76  NLYKYTSTASSFKLYQNFRMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 135

Query: 102 YRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYL 161
           YRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYL
Sbjct: 136 YRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYL 195

Query: 162 VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 197
           VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 196 VGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 230

[Close]

BLAST of Lcy01g012760 vs. ExPASy TrEMBL
Match: A0A6J1K4K6 (Histone H3 OS=Cucurbita maxima OX=3661 GN=LOC111492236 PE=3 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.6e-66
Identity = 137/139 (98.56%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 58  IVQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 117
           ++QMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 11  LIQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 70

Query: 118 STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 177
           STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR
Sbjct: 71  STELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKR 130

Query: 178 VTIMPKDIQLARRIRGERA 197
           VTIMPKDIQLARRIRGERA
Sbjct: 131 VTIMPKDIQLARRIRGERA 149

[Close]

BLAST of Lcy01g012760 vs. NCBI nr
Match: KAG6598700.1 (hypothetical protein SDJN03_08478, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295.4 bits (755), Expect = 3.5e-76
Identity = 157/183 (85.79%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 14  LGSDPGRPLYKELWSPILLIHSHLKKNPNLFEVDNSLSVLQPFFIVQMARTKQTARKSTG 73
           LGSD    LYK +W PIL IH + ++NP L   +NSLS+++     QMARTKQTARKSTG
Sbjct: 16  LGSD-REALYKGVWFPILRIHPYFERNPYLSVDENSLSLVKSLLFFQMARTKQTARKSTG 75

Query: 74  GKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVR 133
           GKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVR
Sbjct: 76  GKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVR 135

Query: 134 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 193
           EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG
Sbjct: 136 EIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRG 195

Query: 194 ERA 197
           ERA
Sbjct: 196 ERA 197

[Close]

BLAST of Lcy01g012760 vs. NCBI nr
Match: KAG6585308.1 (O-fucosyltransferase 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.8 bits (730), Expect = 2.8e-73
Identity = 151/157 (96.18%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 40  NPNLFEVDNSLSVLQPFFIVQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKP 99
           NPNLFE+ NSLSVL+  F VQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKP
Sbjct: 572 NPNLFELLNSLSVLKRLFAVQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKP 631

Query: 100 HRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA 159
           HRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA
Sbjct: 632 HRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA 691

Query: 160 YLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 197
           YLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 692 YLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 728

[Close]

BLAST of Lcy01g012760 vs. NCBI nr
Match: KAG7020226.1 (hypothetical protein SDJN02_16909, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 285.8 bits (730), Expect = 2.8e-73
Identity = 151/157 (96.18%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 40  NPNLFEVDNSLSVLQPFFIVQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKP 99
           NPNLFE+ NSLSVL+  F VQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKP
Sbjct: 25  NPNLFELLNSLSVLKRLFAVQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKP 84

Query: 100 HRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA 159
           HRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA
Sbjct: 85  HRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEA 144

Query: 160 YLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 197
           YLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 145 YLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 181

[Close]

BLAST of Lcy01g012760 vs. NCBI nr
Match: RAL53129.1 (hypothetical protein DM860_006801 [Cuscuta australis])

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-66
Identity = 146/177 (82.49%), Postives = 153/177 (86.44%), Query Frame = 0


Query: 20  RPLYKELWSPILLIHSHLKKNPNLFEVDNSLSVLQPFFIVQMARTKQTARKSTGGKAPRK 79
           RP+ + L+  ++L     +  P+L  V   L V     I  MARTKQTARKSTGGKAPRK
Sbjct: 165 RPIKRRLYISLILRLLRSRSKPSLQIVAVYLCV--GIVIGAMARTKQTARKSTGGKAPRK 224

Query: 80  QLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF 139
           QLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF
Sbjct: 225 QLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF 284

Query: 140 KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 197
           KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 285 KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 339

[Close]

BLAST of Lcy01g012760 vs. NCBI nr
Match: CAA2993655.1 (SCAI [Olea europaea subsp. europaea])

HSP 1 Score: 263.5 bits (672), Expect = 1.5e-66
Identity = 144/167 (86.23%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 35  SHLKKNP-----NLFEVDNSLSVLQPFFIVQMARTKQTARKSTGGKAPRKQLATKAARKS 94
           +HLK  P       + +DN L  L      +MARTKQTARKSTGGKAPRKQLATKAARKS
Sbjct: 583 NHLKVRPCRLVIRGYLIDNGLMKLGKKTDREMARTKQTARKSTGGKAPRKQLATKAARKS 642

Query: 95  APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHA 154
           APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHA
Sbjct: 643 APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHA 702

Query: 155 VLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 197
           VLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 703 VLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 749

[Close]

BLAST of Lcy01g012760 vs. TAIR 10
Match: AT4G40030.2 (Histone superfamily protein )

HSP 1 Score: 259.6 bits (662), Expect = 2.0e-69
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 59  VQMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 118
           ++MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS
Sbjct: 27  IKMARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKS 86

Query: 119 TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 178
           TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV
Sbjct: 87  TELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRV 146

Query: 179 TIMPKDIQLARRIRGERA 197
           TIMPKDIQLARRIRGERA
Sbjct: 147 TIMPKDIQLARRIRGERA 164

[Close]

BLAST of Lcy01g012760 vs. TAIR 10
Match: AT4G40030.1 (Histone superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 5.8e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 120
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 121 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 180
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 181 MPKDIQLARRIRGERA 197
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Lcy01g012760 vs. TAIR 10
Match: AT4G40040.1 (Histone superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 5.8e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 120
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 121 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 180
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 181 MPKDIQLARRIRGERA 197
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Lcy01g012760 vs. TAIR 10
Match: AT4G40040.2 (Histone superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 5.8e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 120
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 121 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 180
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 181 MPKDIQLARRIRGERA 197
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

[Close]

BLAST of Lcy01g012760 vs. TAIR 10
Match: AT4G40030.3 (Histone superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 5.8e-69
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 61  MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 120
           MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTE 60

Query: 121 LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 180
           LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 181 MPKDIQLARRIRGERA 197
           MPKDIQLARRIRGERA
Sbjct: 121 MPKDIQLARRIRGERA 136

The following BLAST results are available for this feature:

BLAST of Lcy01g012760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P59169	8.2e-68	100.00	Histone H3.3 OS=Arabidopsis thaliana OX=3702 GN=HTR4 PE=1 SV=2	[more]
Q6RUR1	8.2e-68	100.00	Histone H3.3 OS=Capsicum annuum OX=4072 PE=2 SV=3	[more]
Q71V89	8.2e-68	100.00	Histone H3.3 OS=Gossypium hirsutum OX=3635 GN=HIS3 PE=2 SV=3	[more]
Q3C2E5	8.2e-68	100.00	Histone H3.3 OS=Lolium multiflorum OX=4521 GN=RH3 PE=2 SV=3	[more]
P69245	8.2e-68	100.00	Histone H3.3 OS=Lolium temulentum OX=34176 PE=2 SV=2	[more]

BLAST of Lcy01g012760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A328E944	5.5e-67	82.49	Histone domain-containing protein OS=Cuscuta australis OX=267555 GN=DM860_006801...	[more]
A0A0D9VUT1	5.5e-67	97.87	Histone domain-containing protein OS=Leersia perrieri OX=77586 PE=3 SV=1	[more]
A0A3Q7IQU4	1.2e-66	86.67	Histone domain-containing protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
A0A6N2NE70	1.2e-66	89.68	Histone H3.2 OS=Salix viminalis OX=40686 GN=SVIM_LOCUS487752 PE=3 SV=1	[more]
A0A6J1K4K6	1.6e-66	98.56	Histone H3 OS=Cucurbita maxima OX=3661 GN=LOC111492236 PE=3 SV=1	[more]

BLAST of Lcy01g012760 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6598700.1	3.5e-76	85.79	hypothetical protein SDJN03_08478, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6585308.1	2.8e-73	96.18	O-fucosyltransferase 7, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7020226.1	2.8e-73	96.18	hypothetical protein SDJN02_16909, partial [Cucurbita argyrosperma subsp. argyro...	[more]
RAL53129.1	1.1e-66	82.49	hypothetical protein DM860_006801 [Cuscuta australis]	[more]
CAA2993655.1	1.5e-66	86.23	SCAI [Olea europaea subsp. europaea]	[more]

BLAST of Lcy01g012760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G40030.2	2.0e-69	98.55	Histone superfamily protein	[more]
AT4G40030.1	5.8e-69	100.00	Histone superfamily protein	[more]
AT4G40040.1	5.8e-69	100.00	Histone superfamily protein	[more]
AT4G40040.2	5.8e-69	100.00	Histone superfamily protein	[more]
AT4G40030.3	5.8e-69	100.00	Histone superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000164	Histone H3/CENP-A	PRINTS	PR00622	HISTONEH3	coord: 77..91 score: 92.32 coord: 140..158 score: 82.38 coord: 174..195 score: 94.86 coord: 118..135 score: 97.46 coord: 94..115 score: 91.8 coord: 63..77 score: 97.1 coord: 158..174 score: 96.93
IPR000164	Histone H3/CENP-A	SMART	SM00428	h35	coord: 94..196 e-value: 1.1E-74 score: 264.1
IPR000164	Histone H3/CENP-A	PANTHER	PTHR11426	HISTONE H3	coord: 41..196
IPR000164	Histone H3/CENP-A	PROSITE	PS00322	HISTONE_H3_1	coord: 75..81
IPR000164	Histone H3/CENP-A	PROSITE	PS00959	HISTONE_H3_2	coord: 127..135
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 61..192 e-value: 3.2E-53 score: 179.6
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 62..196 e-value: 2.2E-75 score: 252.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 62..193
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..101
None	No IPR available	PANTHER	PTHR11426:SF198	SUBFAMILY NOT NAMED	coord: 41..196

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g012760.1	Lcy01g012760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity