Lcy01g012660 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g012660
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	RING-type E3 ubiquitin transferase
Location	Chr01: 33837688 .. 33838956 (-)
RNA-Seq Expression	Lcy01g012660
Synteny	Lcy01g012660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAATTGCGAGTGCTGCACGCTAATCTCCCTCTCTCTTTCTTTCTTCTTCGTTTTCCCATCCTTCCCTCTGTGATTCTGAGCTTTCTCAGAGCTCCCTCTCCCATGGCGGTCACTATTAGCAGAAAACTTTACCCTGTTGCTACAGGAACTAACCAACAAAACACCAATTGTTCTGCCTGCCCTTACGACTGCCCTTTCGACTGCTACGGTTTTCCAGATTTCTACTTGTCGCCGCCGCCGCCGCCTCCTCCTTACGCTGACCACCAAAATAATCCACTTCAACCTTTAACCATCGTCCTGATTGCTCTGTTTGTCGGGGTTTTCTTCGCTTTCAGTTTCTATATCGTGGTCGTTAAATGCCGGGCCTGCTGCAGTGGCTCCCGGAACAGGGGGGAGGAGCCGTCGCAATCGGACGGCGGAGAGGGAGAGTTTCTGCACGAGAATCAAGTCGATCATCCAATTTGGTTCATCACCACGGTCGGGCTGCAGCAATCGGTCATCAATTCGATCACGGTTTGCAAGTACAAGAAAGGCGAAGGTCTGATCGAAGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTCAAGAAGAAGAAATGCTTCGGCTGTTGCCCAAATGCAGCCACGCCTTCCATATTGGCTGTGTGGATACTTGGCTGAGAACCCACACCACTTGCCCTCTCTGTCGAGCTCATATTCTGACTGATTTTGCGACCTCCAACACTGCGAGGCCATCGAATTTGAGTCCTGTGGTTCAAAACGAAGCCAATTCGGGTGTAACTGAACAGACCCAGATGGAAAATGGAGAGACTAATGGCGAAGTTGTGAGGGAAAATCAGGGAGTTGTTTCAGGTGGAAGCTTTGAAAACAGAGGAGATGCTGTTGATGAACAGAGAGCAGTTGGGATTCAGATTGAGGAGATAGTTCCAAAAGAGGGAAATTTTGAAGCTGATGACTCTATTGAAAATGGTGAAGTTGAAGGAAATGAGACTTTGAGGAACAATCAGATGGATTCTTCTTCTGCTGATTGTGAAGAAGGTAGATCAGTTAAAACAGCTACATGATTTGCAAAGAACAGATCAGATGGGTTTGATTGGATAGCTTTTGGTAATTTGGAGATTTCAATTCCATATCTAAATTCATAGAGTATGAGGAGAGGTTTTGATTTGATGGATTGCTTGAATAGTCCAAACTCCAAAGTAATGTTTCGAACCCAGTTTTTGTCTATAATTTGAAAATATAAAGCAAATTCATAAAGCTTCGGTTATTC

mRNA sequence

AGAATTGCGAGTGCTGCACGCTAATCTCCCTCTCTCTTTCTTTCTTCTTCGTTTTCCCATCCTTCCCTCTGTGATTCTGAGCTTTCTCAGAGCTCCCTCTCCCATGGCGGTCACTATTAGCAGAAAACTTTACCCTGTTGCTACAGGAACTAACCAACAAAACACCAATTGTTCTGCCTGCCCTTACGACTGCCCTTTCGACTGCTACGGTTTTCCAGATTTCTACTTGTCGCCGCCGCCGCCGCCTCCTCCTTACGCTGACCACCAAAATAATCCACTTCAACCTTTAACCATCGTCCTGATTGCTCTGTTTGTCGGGGTTTTCTTCGCTTTCAGTTTCTATATCGTGGTCGTTAAATGCCGGGCCTGCTGCAGTGGCTCCCGGAACAGGGGGGAGGAGCCGTCGCAATCGGACGGCGGAGAGGGAGAGTTTCTGCACGAGAATCAAGTCGATCATCCAATTTGGTTCATCACCACGGTCGGGCTGCAGCAATCGGTCATCAATTCGATCACGGTTTGCAAGTACAAGAAAGGCGAAGGTCTGATCGAAGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTCAAGAAGAAGAAATGCTTCGGCTGTTGCCCAAATGCAGCCACGCCTTCCATATTGGCTGTGTGGATACTTGGCTGAGAACCCACACCACTTGCCCTCTCTGTCGAGCTCATATTCTGACTGATTTTGCGACCTCCAACACTGCGAGGCCATCGAATTTGAGTCCTGTGGTTCAAAACGAAGCCAATTCGGGTGTAACTGAACAGACCCAGATGGAAAATGGAGAGACTAATGGCGAAGTTGTGAGGGAAAATCAGGGAGTTGTTTCAGGTGGAAGCTTTGAAAACAGAGGAGATGCTGTTGATGAACAGAGAGCAGTTGGGATTCAGATTGAGGAGATAGTTCCAAAAGAGGGAAATTTTGAAGCTGATGACTCTATTGAAAATGGTGAAGTTGAAGGAAATGAGACTTTGAGGAACAATCAGATGGATTCTTCTTCTGCTGATTGTGAAGAAGGTAGATCAGTTAAAACAGCTACATGATTTGCAAAGAACAGATCAGATGGGTTTGATTGGATAGCTTTTGGTAATTTGGAGATTTCAATTCCATATCTAAATTCATAGAGTATGAGGAGAGGTTTTGATTTGATGGATTGCTTGAATAGTCCAAACTCCAAAGTAATGTTTCGAACCCAGTTTTTGTCTATAATTTGAAAATATAAAGCAAATTCATAAAGCTTCGGTTATTC

Coding sequence (CDS)

ATGGCGGTCACTATTAGCAGAAAACTTTACCCTGTTGCTACAGGAACTAACCAACAAAACACCAATTGTTCTGCCTGCCCTTACGACTGCCCTTTCGACTGCTACGGTTTTCCAGATTTCTACTTGTCGCCGCCGCCGCCGCCTCCTCCTTACGCTGACCACCAAAATAATCCACTTCAACCTTTAACCATCGTCCTGATTGCTCTGTTTGTCGGGGTTTTCTTCGCTTTCAGTTTCTATATCGTGGTCGTTAAATGCCGGGCCTGCTGCAGTGGCTCCCGGAACAGGGGGGAGGAGCCGTCGCAATCGGACGGCGGAGAGGGAGAGTTTCTGCACGAGAATCAAGTCGATCATCCAATTTGGTTCATCACCACGGTCGGGCTGCAGCAATCGGTCATCAATTCGATCACGGTTTGCAAGTACAAGAAAGGCGAAGGTCTGATCGAAGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTCAAGAAGAAGAAATGCTTCGGCTGTTGCCCAAATGCAGCCACGCCTTCCATATTGGCTGTGTGGATACTTGGCTGAGAACCCACACCACTTGCCCTCTCTGTCGAGCTCATATTCTGACTGATTTTGCGACCTCCAACACTGCGAGGCCATCGAATTTGAGTCCTGTGGTTCAAAACGAAGCCAATTCGGGTGTAACTGAACAGACCCAGATGGAAAATGGAGAGACTAATGGCGAAGTTGTGAGGGAAAATCAGGGAGTTGTTTCAGGTGGAAGCTTTGAAAACAGAGGAGATGCTGTTGATGAACAGAGAGCAGTTGGGATTCAGATTGAGGAGATAGTTCCAAAAGAGGGAAATTTTGAAGCTGATGACTCTATTGAAAATGGTGAAGTTGAAGGAAATGAGACTTTGAGGAACAATCAGATGGATTCTTCTTCTGCTGATTGTGAAGAAGGTAGATCAGTTAAAACAGCTACATGA

Protein sequence

MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEANSGVTEQTQMENGETNGEVVRENQGVVSGGSFENRGDAVDEQRAVGIQIEEIVPKEGNFEADDSIENGEVEGNETLRNNQMDSSSADCEEGRSVKTAT

Homology

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BLAST of Lcy01g012660 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.6e-41
Identity = 105/265 (39.62%), Postives = 138/265 (52.08%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCS--ACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNP 60
           MA    RKL+P       +  +CS   C   CP++CY  PD+Y   P  PP  +  Q +P
Sbjct: 1   MARKKHRKLFPTLASETNKTLDCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSP 60

Query: 61  -------------------LQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEE 120
                              L  ++I+ I   V       F++ V K  +      N+G  
Sbjct: 61  CPSPSISAVYLPSQDSSSSLDAISIITITGAVLAILLTGFFL-VAKFFSDSVNRVNQGTY 120

Query: 121 PSQSDGG----EGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSV 180
            S ++      E EF    QVDHPIW I T GLQQS+INSIT+C YK+G+GLIE T+C V
Sbjct: 121 QSDNEDNDTVMEEEFQDREQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPV 180

Query: 181 CLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSP 240
           CL+EF+E+E LRLLPKC+HAFHI C+DTWL +HT CPLCRA I    A  +   P    P
Sbjct: 181 CLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSGP 240

[Close]

BLAST of Lcy01g012660 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.7e-36
Identity = 81/171 (47.37%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 34  CYGFPD----FYLSPPPPPPPYADHQNNPLQPLTIVLI-ALFVGVFFAFSFYIVVVKCRA 93
           C  F D    F   PPPPPPP    + + L P +I ++ ++ + +F  F  Y+ + + R 
Sbjct: 12  CLQFKDLRFCFRQYPPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRR 71

Query: 94  CCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLI 153
             + S   G+   Q D  E E    +   H +W I TVGL +S INSITV  +KKGEG+I
Sbjct: 72  ISAASVTPGDTNQQEDEDETEERDFSDFHH-VWQIPTVGLHRSAINSITVVGFKKGEGII 131

Query: 154 EGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHIL 200
           +GTECSVCL+EF+E+E LRLLPKCSHAFH+ C+DTWL +H  CPLCRA +L
Sbjct: 132 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of Lcy01g012660 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 136.7 bits (343), Expect = 4.5e-31
Identity = 79/198 (39.90%), Postives = 105/198 (53.03%), Query Frame = 0


Query: 26  CPYDCPFDCYGFPDFYLSPPPPP----PPYADHQNNPL-QPLTIVLIALFVGVFFAFSFY 85
           C   CP  CY     ++ PPPPP       AD  + P+  PL I +I +    F   S+Y
Sbjct: 22  CSMYCPQWCY-----FIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYY 81

Query: 86  IVVVK-------CRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFIT-TVGLQQSV 145
             + K        R    GS + G       G  G   H     H  W ++   GL +++
Sbjct: 82  TFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLDETL 141

Query: 146 INSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCP 205
           IN ITVCKY++G+G +  T+CSVCL EF + E LRLLP+CSHAFH  C+DTWL++H+ CP
Sbjct: 142 INKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCP 201

Query: 206 LCRAHILTDFATSNTARP 211
           LCRA+I   F T   A P
Sbjct: 202 LCRANI--TFVTVGLASP 212

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BLAST of Lcy01g012660 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.7e-31
Identity = 80/203 (39.41%), Postives = 112/203 (55.17%), Query Frame = 0


Query: 26  CPYDCPFDCYGFPDFYLSPPPPPPPYAD----HQNNPLQPLTIVLIALFVGVFFAFSFYI 85
           C   CP  CY      + PPPPP  + D      ++   PL I LI +        S+Y 
Sbjct: 22  CNIYCPQWCY-----LIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYT 81

Query: 86  VVVK-CRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVCK 145
           ++ K C        +  E  + +  GEG F    ++          GL +S+I SITV K
Sbjct: 82  LISKYCHR--HHQTSSSETLNLNHNGEGFFSSTQRIS-----TNGDGLNESMIKSITVYK 141

Query: 146 YKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHILT 205
           YK G+G ++G++CSVCLSEF+E E LRLLPKC+HAFH+ C+DTWL++H+ CPLCRA + T
Sbjct: 142 YKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV-T 201

Query: 206 DFATSNTARPSNLSPVVQNEANS 224
                  +   N+S VV N++NS
Sbjct: 202 GVNNPTASVGQNVSVVVANQSNS 211

[Close]

BLAST of Lcy01g012660 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 1.4e-27
Identity = 88/258 (34.11%), Postives = 122/258 (47.29%), Query Frame = 0


Query: 22  NCS--ACPYDCPFDCYGFPDFYLSPPPPPPPYADHQ----NNPLQPLTIVLIALFVGVFF 81
           +CS   C   CP  C      Y+  PPPP  Y D +    ++   PL I LI +    F 
Sbjct: 19  DCSQGVCSVYCPQWC------YVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFI 78

Query: 82  AFSFYIVVVK-------------------------CRACCSGSRNRGEEPSQSDGGEGEF 141
             S+Y ++ K                          +   + + N    P+Q+ GG G  
Sbjct: 79  LVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGG-- 138

Query: 142 LHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLP 201
                           GL +S+I SITV KY+K +G +E ++CSVCLSEFQE E LRLLP
Sbjct: 139 --------------GDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLP 198

Query: 202 KCSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEA-----NSGV 244
           KC+HAFH+ C+DTWL++H+ CPLCRA I+T  A       +N   V +N +     +S V
Sbjct: 199 KCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAV-EIVDLTNQQIVTENNSISTGDDSVV 253

[Close]

BLAST of Lcy01g012660 vs. ExPASy TrEMBL
Match: A0A0A0LPJ4 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G369190 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 2.2e-121
Identity = 225/310 (72.58%), Postives = 253/310 (81.61%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQ 60
           MAVT+SRKL+PVATGT    TNCSACPYDCP+DCYGFPD Y SPPPPPPP +DHQ     
Sbjct: 1   MAVTLSRKLFPVATGTALPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLSDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P TI+++ LF+  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTTIIILILFIAFFVAFTFYIIVVKCRSWYSGSANEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEANSGVTEQTQMENGETNGEV 240
           VDTWLRTHTTCPLCRAHILTDF T N+ RP N+ P+ QNE N G+ E TQMEN  TN E 
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTPNSVRPPNIGPLNQNEGNLGLNEDTQMENENTNREA 240

Query: 241 VRENQG---VVSGGSFENRGDAVDEQRAVGIQIEEIVPKEGNFEADDSIENGEVEGNETL 300
           VREN+G    +S  S ENRGDAVDEQR    ++EEIV KEGNFE+DDS    +VEGNE++
Sbjct: 241 VRENEGGGVSISSESSENRGDAVDEQR----EVEEIVQKEGNFESDDS----KVEGNESM 300

Query: 301 RN-NQMDSSS 307
           RN NQM+SSS
Sbjct: 301 RNDNQMNSSS 300

[Close]

BLAST of Lcy01g012660 vs. ExPASy TrEMBL
Match: A0A5A7VDK2 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004620 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.7e-118
Identity = 226/312 (72.44%), Postives = 249/312 (79.81%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQ 60
           MAVT SRKL+PVATGT Q  TNCSACPYDCP+DCYGFPD Y SPPPPPPP  DHQ     
Sbjct: 1   MAVTHSRKLFPVATGTTQPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLFDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P  I+++ LFV  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTMIIVLILFVAFFIAFTFYIIVVKCRSWYSGSGNEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFAT--SNTARPSNLSPVVQNEANSGVTEQTQMENGETNG 240
           VDTWLRTHTTCPLCRAHILTDF T  SN+ RP NL P+ QNE N G+ E TQMEN   NG
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTSNSNSIRPPNLGPLNQNEGNLGLNEDTQMENENING 240

Query: 241 EVVRENQG---VVSGGSFENRGDAVDEQRAVGIQIEEIVPKEGNFEADDSIENGEVEGNE 300
           E VREN+G    +S  S ENRGD VDEQR    ++EEIV KEGNFE+DDS    +VEGNE
Sbjct: 241 EAVRENEGGVVSISSESSENRGDVVDEQR----EVEEIVQKEGNFESDDS----KVEGNE 300

Query: 301 TLRN-NQMDSSS 307
           + RN N+M SSS
Sbjct: 301 STRNDNRMYSSS 302

[Close]

BLAST of Lcy01g012660 vs. ExPASy TrEMBL
Match: A0A1S3BAW8 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103488086 PE=3 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.7e-118
Identity = 226/312 (72.44%), Postives = 249/312 (79.81%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQ 60
           MAVT SRKL+PVATGT Q  TNCSACPYDCP+DCYGFPD Y SPPPPPPP  DHQ     
Sbjct: 1   MAVTHSRKLFPVATGTTQPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLFDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P  I+++ LFV  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTMIIVLILFVAFFIAFTFYIIVVKCRSWYSGSGNEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFAT--SNTARPSNLSPVVQNEANSGVTEQTQMENGETNG 240
           VDTWLRTHTTCPLCRAHILTDF T  SN+ RP NL P+ QNE N G+ E TQMEN   NG
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTSNSNSIRPPNLGPLNQNEGNLGLNEDTQMENENING 240

Query: 241 EVVRENQG---VVSGGSFENRGDAVDEQRAVGIQIEEIVPKEGNFEADDSIENGEVEGNE 300
           E VREN+G    +S  S ENRGD VDEQR    ++EEIV KEGNFE+DDS    +VEGNE
Sbjct: 241 EAVRENEGGVVSISSESSENRGDVVDEQR----EVEEIVQKEGNFESDDS----KVEGNE 300

Query: 301 TLRN-NQMDSSS 307
           + RN N+M SSS
Sbjct: 301 STRNDNRMYSSS 302

[Close]

BLAST of Lcy01g012660 vs. ExPASy TrEMBL
Match: A0A6J1HEB6 (RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111462708 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.7e-110
Identity = 215/302 (71.19%), Postives = 241/302 (79.80%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPP--PPPPYADHQNNP 60
           MAV I+RKL+PVA GT+QQ+ NCSACPYDCPFDC   PDFY SPPP  P PP+ DHQ   
Sbjct: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPLPLPPFGDHQKQ- 60

Query: 61  LQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDH 120
           L  + IV++ALFVG FF FSFYI++VKC+A  SGS N+G E SQ +G +GEFL+ENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQS+INSITVCKYKKGEGLIEGT CSVCL+EFQE+EMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEANSGVTEQTQMENGETNG 240
           GCVDTWLRTHTTCPLCRAHILTDF TSN ARP N   + QNEAN GV E+TQMEN E  G
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIEETQMENLE--G 240

Query: 241 EVVRENQGVVSGGSFENRGDAVDEQRAVGI-QIEEIVPKEGNFEADDSIENGEVEGNETL 300
           E   E   V  GG  ENRGDAV EQR +G+ QI EIVPKEG FE+DDS    ++E  ET+
Sbjct: 241 E---EQSAVSGGGGVENRGDAVYEQRDIGVPQIGEIVPKEGVFESDDS----KMEVTETM 292

[Close]

BLAST of Lcy01g012660 vs. ExPASy TrEMBL
Match: A0A6J1K4G1 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492196 PE=3 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 8.6e-110
Identity = 215/300 (71.67%), Postives = 238/300 (79.33%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQ 60
           MAV I+RKL+PV TGT+QQ+ NCS CPYDCPFDC   PDFY S   PPPP+ DHQ   L 
Sbjct: 1   MAVGITRKLFPVETGTHQQSFNCSGCPYDCPFDCLDLPDFYFS---PPPPFGDHQKQ-LP 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
            + IV++ALFVG FF FSFYI++VK +A  SGS N+G E SQ DG +GEFL+ENQVDHPI
Sbjct: 61  TIVIVILALFVGFFFTFSFYIIIVKWQAWRSGSGNQGAEASQLDGEDGEFLNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITTVGLQQS+INSITVCKYKKGEGLIEGT CSVCL+EFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEANSGVTEQTQMENGETNGEV 240
           VDTWLRTHTTCPLCRAHILTDFATSN  RP N   V QNEAN  V E+TQMEN E  GE 
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFATSNFPRPPNSGHVNQNEANLAVIEETQMENLE--GE- 240

Query: 241 VRENQGVVSGGSFENRGDAVDEQRAVGI-QIEEIVPKEGNFEADDSIENGEVEGNETLRN 300
             E   V  GG  ENRGDAVDEQR VG+ QI EIVPKEG FE+DDS    ++E NET+ N
Sbjct: 241 --EQSAVSGGGGVENRGDAVDEQRDVGVPQIGEIVPKEGVFESDDS----KMEVNETMMN 287

[Close]

BLAST of Lcy01g012660 vs. NCBI nr
Match: XP_038884462.1 (RING-H2 finger protein ATL54-like [Benincasa hispida])

HSP 1 Score: 454.1 bits (1167), Expect = 9.7e-124
Identity = 231/307 (75.24%), Postives = 248/307 (80.78%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQ 60
           MAVTISRKL+PVATGT Q  TNCS CPYDCPFDCYG PDFY S PPPPPP ADHQ     
Sbjct: 1   MAVTISRKLFPVATGTTQPTTNCSGCPYDCPFDCYGIPDFYYSQPPPPPPLADHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P  I+++ LFVG F AFSFYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTLIIILLLFVGFFIAFSFYIIVVKCRSWQSGSGNEGTEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGTECSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTECSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEANSGVTEQTQMENGETNGEV 240
           VDTWLRTHTTCPLCRAHILTDF  SN+ RP NL PV QNEAN GV E+TQMEN E NGEV
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTASNSVRPPNLGPVNQNEANLGVNEETQMENEEINGEV 240

Query: 241 VRENQGVVSGGSFENRGDAVDEQRAVGIQIEEIVPKEGNFEADDSIENGEVEGNETLRNN 300
           + EN+GVVS G+FENRGD VDEQR VGI            + DDS    +VEGNE+ RNN
Sbjct: 241 LVENEGVVSRGNFENRGDVVDEQREVGI-----------VQTDDS----KVEGNESTRNN 290

Query: 301 QMDSSSA 308
           QMDSSSA
Sbjct: 301 QMDSSSA 290

[Close]

BLAST of Lcy01g012660 vs. NCBI nr
Match: XP_011649673.1 (RING-H2 finger protein ATL54 [Cucumis sativus] >KGN62717.1 hypothetical protein Csa_022380 [Cucumis sativus])

HSP 1 Score: 445.3 bits (1144), Expect = 4.5e-121
Identity = 225/310 (72.58%), Postives = 253/310 (81.61%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQ 60
           MAVT+SRKL+PVATGT    TNCSACPYDCP+DCYGFPD Y SPPPPPPP +DHQ     
Sbjct: 1   MAVTLSRKLFPVATGTALPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLSDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P TI+++ LF+  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTTIIILILFIAFFVAFTFYIIVVKCRSWYSGSANEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEANSGVTEQTQMENGETNGEV 240
           VDTWLRTHTTCPLCRAHILTDF T N+ RP N+ P+ QNE N G+ E TQMEN  TN E 
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTPNSVRPPNIGPLNQNEGNLGLNEDTQMENENTNREA 240

Query: 241 VRENQG---VVSGGSFENRGDAVDEQRAVGIQIEEIVPKEGNFEADDSIENGEVEGNETL 300
           VREN+G    +S  S ENRGDAVDEQR    ++EEIV KEGNFE+DDS    +VEGNE++
Sbjct: 241 VRENEGGGVSISSESSENRGDAVDEQR----EVEEIVQKEGNFESDDS----KVEGNESM 300

Query: 301 RN-NQMDSSS 307
           RN NQM+SSS
Sbjct: 301 RNDNQMNSSS 300

[Close]

BLAST of Lcy01g012660 vs. NCBI nr
Match: XP_008444871.1 (PREDICTED: RING-H2 finger protein ATL54-like [Cucumis melo] >KAA0065127.1 RING-H2 finger protein ATL54-like [Cucumis melo var. makuwa])

HSP 1 Score: 435.6 bits (1119), Expect = 3.6e-118
Identity = 226/312 (72.44%), Postives = 249/312 (79.81%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQ 60
           MAVT SRKL+PVATGT Q  TNCSACPYDCP+DCYGFPD Y SPPPPPPP  DHQ     
Sbjct: 1   MAVTHSRKLFPVATGTTQPTTNCSACPYDCPYDCYGFPDLYFSPPPPPPPLFDHQKQ--L 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
           P  I+++ LFV  F AF+FYI+VVKCR+  SGS N G E  QSDGGEGEF++ENQVDHPI
Sbjct: 61  PTMIIVLILFVAFFIAFTFYIIVVKCRSWYSGSGNEGAEALQSDGGEGEFMNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITT GLQQSVINSITVCKYKK EGLIEGT+CSVCLSEFQE+EMLRLLPKCSHAFHIGC
Sbjct: 121 WFITTAGLQQSVINSITVCKYKKSEGLIEGTDCSVCLSEFQEDEMLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFAT--SNTARPSNLSPVVQNEANSGVTEQTQMENGETNG 240
           VDTWLRTHTTCPLCRAHILTDF T  SN+ RP NL P+ QNE N G+ E TQMEN   NG
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFTTSNSNSIRPPNLGPLNQNEGNLGLNEDTQMENENING 240

Query: 241 EVVRENQG---VVSGGSFENRGDAVDEQRAVGIQIEEIVPKEGNFEADDSIENGEVEGNE 300
           E VREN+G    +S  S ENRGD VDEQR    ++EEIV KEGNFE+DDS    +VEGNE
Sbjct: 241 EAVRENEGGVVSISSESSENRGDVVDEQR----EVEEIVQKEGNFESDDS----KVEGNE 300

Query: 301 TLRN-NQMDSSS 307
           + RN N+M SSS
Sbjct: 301 STRNDNRMYSSS 302

[Close]

BLAST of Lcy01g012660 vs. NCBI nr
Match: XP_023546737.1 (RING-H2 finger protein ATL54-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.9 bits (1078), Expect = 2.0e-113
Identity = 218/300 (72.67%), Postives = 243/300 (81.00%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQ 60
           MAV I+RKL+PVATGT+QQ+ NCSACPYDCP DC   PDFY SPPPPPPP+ DHQ   L 
Sbjct: 1   MAVGITRKLFPVATGTHQQSFNCSACPYDCPLDCLDLPDFYFSPPPPPPPFDDHQKQ-LP 60

Query: 61  PLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPI 120
            + IV++ALFVG FF FSFYI+VVKC+A  SGS N+G E SQ DG +GEFL+ENQVDHPI
Sbjct: 61  TIVIVILALFVGFFFTFSFYIIVVKCQAWRSGSGNQGAETSQLDGEDGEFLNENQVDHPI 120

Query: 121 WFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGC 180
           WFITTVGLQQS+INSITVCKYKKGEGLIEGT CSVCL+EFQE+E+LRLLPKCSHAFHIGC
Sbjct: 121 WFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDELLRLLPKCSHAFHIGC 180

Query: 181 VDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEANSGVTEQTQMENGETNGEV 240
           VDTWLRTHTTCPLCRAHILTDF TSNTARP N   + QNEAN  V E+TQMEN E  GE 
Sbjct: 181 VDTWLRTHTTCPLCRAHILTDFPTSNTARPPNSGHLNQNEANLVVIEETQMENLE--GE- 240

Query: 241 VRENQGVVSGGSFENRGDAVDEQRAVGI-QIEEIVPKEGNFEADDSIENGEVEGNETLRN 300
             E   V  GG  ENRGDAVDEQR +G+  I EIVPKEG FE+DDS    ++E NET+ N
Sbjct: 241 --EQSAVSGGGGVENRGDAVDEQRDIGVPPIGEIVPKEGVFESDDS----KMEVNETMMN 290

[Close]

BLAST of Lcy01g012660 vs. NCBI nr
Match: KAG6598705.1 (RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 412.5 bits (1059), Expect = 3.2e-111
Identity = 215/302 (71.19%), Postives = 241/302 (79.80%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCSACPYDCPFDCYGFPDFYLSPPPPP--PPYADHQNNP 60
           MAV I+RKL+PVA GT+QQ+ NCSACPYDCPFDC   PDFY SPPPPP  PP+ DHQ   
Sbjct: 1   MAVGITRKLFPVAAGTHQQSFNCSACPYDCPFDCLDLPDFYFSPPPPPPLPPFGDHQKQ- 60

Query: 61  LQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEEPSQSDGGEGEFLHENQVDH 120
           L  + IV++ALFVG FF FSFYI++VKC+A  SGS N+G E SQ +G +GEFL+ENQVDH
Sbjct: 61  LPTIVIVILALFVGFFFTFSFYIIIVKCQAWRSGSGNQGAEASQLNGEDGEFLNENQVDH 120

Query: 121 PIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHI 180
           PIWFITTVGLQQS+INSITVCKYKKGEGLIEGT CSVCL+EFQE+EMLRLLPKCSHAFHI
Sbjct: 121 PIWFITTVGLQQSIINSITVCKYKKGEGLIEGTVCSVCLNEFQEDEMLRLLPKCSHAFHI 180

Query: 181 GCVDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEANSGVTEQTQMENGETNG 240
           GCVDTWLRTHTTCPLCRAHILTDF TSN ARP N   + QNEAN GV ++TQMEN E  G
Sbjct: 181 GCVDTWLRTHTTCPLCRAHILTDFPTSNAARPPNSGHLNQNEANLGVIQETQMENLE--G 240

Query: 241 EVVRENQGVVSGGSFENRGDAVDEQRAVGI-QIEEIVPKEGNFEADDSIENGEVEGNETL 300
           E   E   V  GG  ENRGDAVDEQR +G+ QI EI PKEG FE+DDS    ++E  ET 
Sbjct: 241 E---EQSAVSGGGGVENRGDAVDEQRDIGVPQIGEIAPKEGVFESDDS----KMEVTETT 292

[Close]

BLAST of Lcy01g012660 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-42
Identity = 105/265 (39.62%), Postives = 138/265 (52.08%), Query Frame = 0


Query: 1   MAVTISRKLYPVATGTNQQNTNCS--ACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNP 60
           MA    RKL+P       +  +CS   C   CP++CY  PD+Y   P  PP  +  Q +P
Sbjct: 1   MARKKHRKLFPTLASETNKTLDCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSP 60

Query: 61  -------------------LQPLTIVLIALFVGVFFAFSFYIVVVKCRACCSGSRNRGEE 120
                              L  ++I+ I   V       F++ V K  +      N+G  
Sbjct: 61  CPSPSISAVYLPSQDSSSSLDAISIITITGAVLAILLTGFFL-VAKFFSDSVNRVNQGTY 120

Query: 121 PSQSDGG----EGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSV 180
            S ++      E EF    QVDHPIW I T GLQQS+INSIT+C YK+G+GLIE T+C V
Sbjct: 121 QSDNEDNDTVMEEEFQDREQVDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPV 180

Query: 181 CLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSP 240
           CL+EF+E+E LRLLPKC+HAFHI C+DTWL +HT CPLCRA I    A  +   P    P
Sbjct: 181 CLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSGP 240

[Close]

BLAST of Lcy01g012660 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 154.1 bits (388), Expect = 1.9e-37
Identity = 81/171 (47.37%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 34  CYGFPD----FYLSPPPPPPPYADHQNNPLQPLTIVLI-ALFVGVFFAFSFYIVVVKCRA 93
           C  F D    F   PPPPPPP    + + L P +I ++ ++ + +F  F  Y+ + + R 
Sbjct: 12  CLQFKDLRFCFRQYPPPPPPPPPPRELSLLLPTSICVVGSIILFLFLVFFLYLHITQQRR 71

Query: 94  CCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLI 153
             + S   G+   Q D  E E    +   H +W I TVGL +S INSITV  +KKGEG+I
Sbjct: 72  ISAASVTPGDTNQQEDEDETEERDFSDFHH-VWQIPTVGLHRSAINSITVVGFKKGEGII 131

Query: 154 EGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHIL 200
           +GTECSVCL+EF+E+E LRLLPKCSHAFH+ C+DTWL +H  CPLCRA +L
Sbjct: 132 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of Lcy01g012660 vs. TAIR 10
Match: AT4G33565.1 (RING/U-box superfamily protein )

HSP 1 Score: 136.7 bits (343), Expect = 3.2e-32
Identity = 97/264 (36.74%), Postives = 144/264 (54.55%), Query Frame = 0


Query: 24  SACPYDCPFDCYGFPDFYLSPPPPPPPYADHQNNPLQPLTIVLIALFVGVFFAFSFYIVV 83
           S C  +CP  C       LSPP        H ++ L+ + I+  +  +   F  +  ++ 
Sbjct: 91  SYCLDECPSICEIVVISGLSPPA-----EIHHDDNLKRILIISASSIITTLFLLTLLVLC 150

Query: 84  VKC----RACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVC 143
            K     R   + SR    E +++   +G       VDHPIW I T+GL  +VI+SI VC
Sbjct: 151 FKFYYRRRRSITTSRRWSMEEARNWDFDGP--APVIVDHPIWHIRTIGLNPTVISSIKVC 210

Query: 144 KYKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHIL 203
           +Y K +G++EGT+CSVCLSEF+EEE LRLLPKC HAFH+ C+DTWLR+HT CPLCRA I+
Sbjct: 211 QYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIV 270

Query: 204 TDFATSNTARPSNLSPVVQNEANSGVTEQTQMENG-ETNGEVVRENQGVVSGGSFENRGD 263
                +NT    +      +E    ++     ENG +T+ E+  E  G VS  S  + G+
Sbjct: 271 ----EANTMIDDH------SEGLEEISVMIPEENGDDTDEEIEEERDGFVSNIS-RDHGE 330

Query: 264 AVDE--QRAV------GIQIEEIV 275
           +  +  +R+V      G+++ E+V
Sbjct: 331 SQQQRVRRSVSLDSLSGLRVSEVV 336

[Close]

BLAST of Lcy01g012660 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 5.4e-32
Identity = 80/203 (39.41%), Postives = 112/203 (55.17%), Query Frame = 0


Query: 26  CPYDCPFDCYGFPDFYLSPPPPPPPYAD----HQNNPLQPLTIVLIALFVGVFFAFSFYI 85
           C   CP  CY      + PPPPP  + D      ++   PL I LI +        S+Y 
Sbjct: 22  CNIYCPQWCY-----LIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALILVSYYT 81

Query: 86  VVVK-CRACCSGSRNRGEEPSQSDGGEGEFLHENQVDHPIWFITTVGLQQSVINSITVCK 145
           ++ K C        +  E  + +  GEG F    ++          GL +S+I SITV K
Sbjct: 82  LISKYCHR--HHQTSSSETLNLNHNGEGFFSSTQRIS-----TNGDGLNESMIKSITVYK 141

Query: 146 YKKGEGLIEGTECSVCLSEFQEEEMLRLLPKCSHAFHIGCVDTWLRTHTTCPLCRAHILT 205
           YK G+G ++G++CSVCLSEF+E E LRLLPKC+HAFH+ C+DTWL++H+ CPLCRA + T
Sbjct: 142 YKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRAFV-T 201

Query: 206 DFATSNTARPSNLSPVVQNEANS 224
                  +   N+S VV N++NS
Sbjct: 202 GVNNPTASVGQNVSVVVANQSNS 211

[Close]

BLAST of Lcy01g012660 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 125.2 bits (313), Expect = 9.6e-29
Identity = 88/258 (34.11%), Postives = 122/258 (47.29%), Query Frame = 0


Query: 22  NCS--ACPYDCPFDCYGFPDFYLSPPPPPPPYADHQ----NNPLQPLTIVLIALFVGVFF 81
           +CS   C   CP  C      Y+  PPPP  Y D +    ++   PL I LI +    F 
Sbjct: 19  DCSQGVCSVYCPQWC------YVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFI 78

Query: 82  AFSFYIVVVK-------------------------CRACCSGSRNRGEEPSQSDGGEGEF 141
             S+Y ++ K                          +   + + N    P+Q+ GG G  
Sbjct: 79  LVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGG-- 138

Query: 142 LHENQVDHPIWFITTVGLQQSVINSITVCKYKKGEGLIEGTECSVCLSEFQEEEMLRLLP 201
                           GL +S+I SITV KY+K +G +E ++CSVCLSEFQE E LRLLP
Sbjct: 139 --------------GDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLP 198

Query: 202 KCSHAFHIGCVDTWLRTHTTCPLCRAHILTDFATSNTARPSNLSPVVQNEA-----NSGV 244
           KC+HAFH+ C+DTWL++H+ CPLCRA I+T  A       +N   V +N +     +S V
Sbjct: 199 KCNHAFHVPCIDTWLKSHSNCPLCRAFIVTSSAV-EIVDLTNQQIVTENNSISTGDDSVV 253

The following BLAST results are available for this feature:

BLAST of Lcy01g012660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFY8	1.6e-41	39.62	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]
Q9LX93	2.7e-36	47.37	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q7XLY8	4.5e-31	39.90	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
Q9LF64	7.7e-31	39.41	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	1.4e-27	34.11	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of Lcy01g012660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPJ4	2.2e-121	72.58	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_2G369190 PE...	[more]
A0A5A7VDK2	1.7e-118	72.44	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A1S3BAW8	1.7e-118	72.44	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103488086 PE=3 ...	[more]
A0A6J1HEB6	1.7e-110	71.19	RING-type E3 ubiquitin transferase OS=Cucurbita moschata OX=3662 GN=LOC111462708...	[more]
A0A6J1K4G1	8.6e-110	71.67	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111492196 P...	[more]

BLAST of Lcy01g012660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884462.1	9.7e-124	75.24	RING-H2 finger protein ATL54-like [Benincasa hispida]	[more]
XP_011649673.1	4.5e-121	72.58	RING-H2 finger protein ATL54 [Cucumis sativus] >KGN62717.1 hypothetical protein ...	[more]
XP_008444871.1	3.6e-118	72.44	PREDICTED: RING-H2 finger protein ATL54-like [Cucumis melo] >KAA0065127.1 RING-H...	[more]
XP_023546737.1	2.0e-113	72.67	RING-H2 finger protein ATL54-like [Cucurbita pepo subsp. pepo]	[more]
KAG6598705.1	3.2e-111	71.19	RING-H2 finger protein ATL54, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy01g012660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72220.1	1.2e-42	39.62	RING/U-box superfamily protein	[more]
AT5G10380.1	1.9e-37	47.37	RING/U-box superfamily protein	[more]
AT4G33565.1	3.2e-32	36.74	RING/U-box superfamily protein	[more]
AT5G17600.1	5.4e-32	39.41	RING/U-box superfamily protein	[more]
AT3G03550.1	9.6e-29	34.11	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 149..203 e-value: 0.0097 score: -1.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..319
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..319
None	No IPR available	PANTHER	PTHR45676:SF121	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 8..307
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 152..195 e-value: 1.17297E-18 score: 76.1865
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 146..202
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 153..194 e-value: 1.3E-6 score: 38.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 152..195 e-value: 1.7E-13 score: 50.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 153..195 score: 12.813844
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 127..202 e-value: 1.3E-21 score: 77.6
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 8..307

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g012660.1	Lcy01g012660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane