Lcy01g012530 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g012530
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr01: 33485226 .. 33487079 (-)
RNA-Seq Expression	Lcy01g012530
Synteny	Lcy01g012530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTAATTCGCCGGTCGCCGGCGAAGCACGATGTTCAGTGCTCCCACAGACCGGGCCTCTGGGGGTTTATTGTGTGTATGTTATGCATAGCTCTGTAATGGCATGGGGATCGGGTTTTTGGGGTTTAAATCATCAAGAAATATCGAGCGGCGCTGATTAATAATGTTTTATGCTGCTGGTTTAGGGCAAATATCTATACCGTCGGTTTTTTTGGACCCATAAAAGGGACGACCGTGATATACCTTCGCAGTTCGCGCCAATGAGCAAGCAAGGCAATCGATGACGCGGTGGCTCGGCGCTCCAGAGATCGCCGCTCGAACGGAGTCGGTGATGAAGACGTCTCTCCGCTCCGGCACCGGACGGTGAGCCTTGTACATTTGTCTCTTTGTTTTCCTAGCTTTAATAAATAACAACTCCGAATTTCATCGTTTCATTGTCCACTTCTGGTCTGAACCAACGAGTTGTTGATTCTACAAATGCAGAATTCACTTCCTTCTCGAAGCATGGAGGCCTATTTCGTCAGTTACTTCTCCAGTTGAAGGCACCATTTCTACTGTATCGCCCAATACCCTACAAAATGGCGATGACGATGGCAACTTCAAGCGGGAATTTATGAAGTTCAAGTCACCTCGGAGTAGCATGACCACCGTACTTCAGAGTGGTAACCGTGAAGCTCAAAGGACCTCAATCATTAAGCTCCGGCGTGTTGCCCAGAAGCTCTACAAATCGAAGCGCTTTGCTCGTGCGCTAGAGGTTGGTAACGAACAGTTAGGAAATCGAAATTTCTCACTTCATTTTTATGCCATTGGAAGAATAGAATCGAAATCACAGAATATTGCATCTAACTATATAGTTCATATATTTAGGTACTAATGTTGATGGAAACTCGAAATAATTTGCGTATATCAACGGCTGATCATGCTCTCAGATTGGAATTGACCATCAAATTGCAAGGTTTACTGAAAGCTGAAGAATACTTCAATCAATTGCCCAACATAGCCTCTCAAAAAGCTTCATCTCTCCCCCTTCTTCATGGTTATGTCAAAGCGAGGAACACTGAGAAAGCTGAAGCCTTCATGGTGAAACTGAGGGACTTGGGACTGGTCGTAGACCCACATCTTTACAATGAGATGATGAAACTGTATGTGGCCACATCTCAAACTGAGAAAGTTCCTCTTGTCATAAGGGACATGAAGCAAAATCAAATAATGAGAAATGTTCTCTCTTACAACCTTTGGATGAATGCTTGCAGTGAGATATATGGGGTTGGGTCAGTGGAGTTGGTGTACAAAGAAATGCTGACTGATAAGAACGTTCAAGTGGGATGGAGCACCCTATCTACCCTGGCCAAAGTTTATATACAGGCAGGCCTTGTTAACAAAGCGTTTGCAGCCTTAAAAGATGCAGAGAAGAAGCTATCCCCATGTAACCGGCTTGGATATTTCTTCTTAATCACATTGTATGCCTCTTTGAACAATAAGGAGGGAGTTCTTCGACTATGGAGAGGTAGTAAAGCTGTAAGTGGCAGACCTACTTGTGCCAATTACATGTGTATATTGCTGTGTTTGGTGAAGCTAGGAGACATCGACGAGGCCGAGAAAATATTTAGGGAATGGGAGTTCGATTGTCGTAACTACGACATTAGAGTCTCCAATGTTCTTCTGGGTGCATATGTGAGAAATGGATTGTTAGAGAAGGCCGAGTCGTTACATATGCGCATATTGGAGAGGGGTGGTAGTCCAAATTGTAAGACATGGGAGATTCTAATGGAGGGATGGGTGAGAAGCCAAAACGTGGCTAGAGATATTGATTTTCTGAAGGATTTTGCTTTGTTGAAATGTCATGGTTGA

mRNA sequence

ATGAAACTAATTCGCCGGTCGCCGGCGAAGCACGATGTTCAGTGCTCCCACAGACCGGGCCTCTGGGGGTTTATTGTGTTTCGCGCCAATGAGCAAGCAAGGCAATCGATGACGCGGTGGCTCGGCGCTCCAGAGATCGCCGCTCGAACGGAGTCGGTGATGAAGACGTCTCTCCGCTCCGGCACCGGACGAATTCACTTCCTTCTCGAAGCATGGAGGCCTATTTCGTCAGTTACTTCTCCAGTTGAAGGCACCATTTCTACTGTATCGCCCAATACCCTACAAAATGGCGATGACGATGGCAACTTCAAGCGGGAATTTATGAAGTTCAAGTCACCTCGGAGTAGCATGACCACCGTACTTCAGAGTGGTAACCGTGAAGCTCAAAGGACCTCAATCATTAAGCTCCGGCGTGTTGCCCAGAAGCTCTACAAATCGAAGCGCTTTGCTCGTGCGCTAGAGGTACTAATGTTGATGGAAACTCGAAATAATTTGCGTATATCAACGGCTGATCATGCTCTCAGATTGGAATTGACCATCAAATTGCAAGGTTTACTGAAAGCTGAAGAATACTTCAATCAATTGCCCAACATAGCCTCTCAAAAAGCTTCATCTCTCCCCCTTCTTCATGGTTATGTCAAAGCGAGGAACACTGAGAAAGCTGAAGCCTTCATGGTGAAACTGAGGGACTTGGGACTGGTCGTAGACCCACATCTTTACAATGAGATGATGAAACTGTATGTGGCCACATCTCAAACTGAGAAAGTTCCTCTTGTCATAAGGGACATGAAGCAAAATCAAATAATGAGAAATGTTCTCTCTTACAACCTTTGGATGAATGCTTGCAGTGAGATATATGGGGTTGGGTCAGTGGAGTTGGTGTACAAAGAAATGCTGACTGATAAGAACGTTCAAGTGGGATGGAGCACCCTATCTACCCTGGCCAAAGTTTATATACAGGCAGGCCTTGTTAACAAAGCGTTTGCAGCCTTAAAAGATGCAGAGAAGAAGCTATCCCCATGTAACCGGCTTGGATATTTCTTCTTAATCACATTGTATGCCTCTTTGAACAATAAGGAGGGAGTTCTTCGACTATGGAGAGGTAGTAAAGCTGTAAGTGGCAGACCTACTTGTGCCAATTACATGTGTATATTGCTGTGTTTGGTGAAGCTAGGAGACATCGACGAGGCCGAGAAAATATTTAGGGAATGGGAGTTCGATTGTCGTAACTACGACATTAGAGTCTCCAATGTTCTTCTGGGTGCATATGTGAGAAATGGATTGTTAGAGAAGGCCGAGTCGTTACATATGCGCATATTGGAGAGGGGTGGTAGTCCAAATTGTAAGACATGGGAGATTCTAATGGAGGGATGGGTGAGAAGCCAAAACGTGGCTAGAGATATTGATTTTCTGAAGGATTTTGCTTTGTTGAAATGTCATGGTTGA

Coding sequence (CDS)

ATGAAACTAATTCGCCGGTCGCCGGCGAAGCACGATGTTCAGTGCTCCCACAGACCGGGCCTCTGGGGGTTTATTGTGTTTCGCGCCAATGAGCAAGCAAGGCAATCGATGACGCGGTGGCTCGGCGCTCCAGAGATCGCCGCTCGAACGGAGTCGGTGATGAAGACGTCTCTCCGCTCCGGCACCGGACGAATTCACTTCCTTCTCGAAGCATGGAGGCCTATTTCGTCAGTTACTTCTCCAGTTGAAGGCACCATTTCTACTGTATCGCCCAATACCCTACAAAATGGCGATGACGATGGCAACTTCAAGCGGGAATTTATGAAGTTCAAGTCACCTCGGAGTAGCATGACCACCGTACTTCAGAGTGGTAACCGTGAAGCTCAAAGGACCTCAATCATTAAGCTCCGGCGTGTTGCCCAGAAGCTCTACAAATCGAAGCGCTTTGCTCGTGCGCTAGAGGTACTAATGTTGATGGAAACTCGAAATAATTTGCGTATATCAACGGCTGATCATGCTCTCAGATTGGAATTGACCATCAAATTGCAAGGTTTACTGAAAGCTGAAGAATACTTCAATCAATTGCCCAACATAGCCTCTCAAAAAGCTTCATCTCTCCCCCTTCTTCATGGTTATGTCAAAGCGAGGAACACTGAGAAAGCTGAAGCCTTCATGGTGAAACTGAGGGACTTGGGACTGGTCGTAGACCCACATCTTTACAATGAGATGATGAAACTGTATGTGGCCACATCTCAAACTGAGAAAGTTCCTCTTGTCATAAGGGACATGAAGCAAAATCAAATAATGAGAAATGTTCTCTCTTACAACCTTTGGATGAATGCTTGCAGTGAGATATATGGGGTTGGGTCAGTGGAGTTGGTGTACAAAGAAATGCTGACTGATAAGAACGTTCAAGTGGGATGGAGCACCCTATCTACCCTGGCCAAAGTTTATATACAGGCAGGCCTTGTTAACAAAGCGTTTGCAGCCTTAAAAGATGCAGAGAAGAAGCTATCCCCATGTAACCGGCTTGGATATTTCTTCTTAATCACATTGTATGCCTCTTTGAACAATAAGGAGGGAGTTCTTCGACTATGGAGAGGTAGTAAAGCTGTAAGTGGCAGACCTACTTGTGCCAATTACATGTGTATATTGCTGTGTTTGGTGAAGCTAGGAGACATCGACGAGGCCGAGAAAATATTTAGGGAATGGGAGTTCGATTGTCGTAACTACGACATTAGAGTCTCCAATGTTCTTCTGGGTGCATATGTGAGAAATGGATTGTTAGAGAAGGCCGAGTCGTTACATATGCGCATATTGGAGAGGGGTGGTAGTCCAAATTGTAAGACATGGGAGATTCTAATGGAGGGATGGGTGAGAAGCCAAAACGTGGCTAGAGATATTGATTTTCTGAAGGATTTTGCTTTGTTGAAATGTCATGGTTGA

Protein sequence

MKLIRRSPAKHDVQCSHRPGLWGFIVFRANEQARQSMTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVEGTISTVSPNTLQNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALEVLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVKARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDIDEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEILMEGWVRSQNVARDIDFLKDFALLKCHG

Homology

[Close]

BLAST of Lcy01g012530 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.4e-113
Identity = 212/410 (51.71%), Postives = 286/410 (69.76%), Query Frame = 0


Query: 77  SVTSPVEGTISTVSPNTLQNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKL 136
           + T  V   +S+++  +  +   + N  +E ++   PR S+T++LQ         S+ +L
Sbjct: 14  NTTGVVSRLVSSLADGSDTSSVANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSEL 73

Query: 137 RRVAQKLYKSKRFARALEVLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQL- 196
           R ++++L +S R+  AL+++  ME + ++  S  D ALRL+L IK  GL + EEYF +L 
Sbjct: 74  RLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLL 133

Query: 197 ---PNIASQKASSLPLLHGYVKARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQ 256
               ++   K++ LPLL  YVK +  ++AEA M KL  LG +V PH +NEMMKLY A+ Q
Sbjct: 134 HSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQ 193

Query: 257 TEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLS 316
            EKV +V+  MK N+I RNVLSYNLWMNAC E+ GV +VE VYKEM+ DK+V+VGWS+L 
Sbjct: 194 YEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLC 253

Query: 317 TLAKVYIQAGLVNKAFAALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAV 376
           TLA VYI++G   KA   L+DAEK L+  NRLGYFFLITLYASL NKEGV+RLW  SK+V
Sbjct: 254 TLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSV 313

Query: 377 SGRPTCANYMCILLCLVKLGDIDEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKA 436
            GR +C NY+C+L  LVK GD++EAE++F EWE  C NYD+RVSNVLLGAYVRNG + KA
Sbjct: 314 CGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKA 373

Query: 437 ESLHMRILERGGSPNCKTWEILMEGWVRSQNVARDIDFLKDFALL--KCH 481
           ESLH  +LERGG+PN KTWEILMEGWV+ +N+ + ID +    +L  +CH
Sbjct: 374 ESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCH 423

[Close]

BLAST of Lcy01g012530 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 244.2 bits (622), Expect = 3.0e-63
Identity = 132/364 (36.26%), Postives = 216/364 (59.34%), Query Frame = 0


Query: 111 KSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALEVLMLMETR-NNLRIST 170
           + P     +VL    +  ++ +  +L RV ++L K KR  +ALEV   M  R    R+S 
Sbjct: 77  EKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSA 136

Query: 171 ADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVKARNTEKAEAFMVKLR 230
           +D A++L+L  K++G+  AEE+F QLP     +     LL+ YV+A++ EKAEA +  +R
Sbjct: 137 SDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMR 196

Query: 231 DLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEIYGVG 290
           D G  + P  +N MM LY+   + +KV  ++ +MKQ  I  ++ SYN+W+++C  +  V 
Sbjct: 197 DKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVE 256

Query: 291 SVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDAEKKLSPCNRLGYFFL 350
            +ELVY++M +D ++   W+T ST+A +YI+ G   KA  AL+  E +++  NR+ Y +L
Sbjct: 257 KMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYL 316

Query: 351 ITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDIDEAEKIFREWEFDCR 410
           ++LY SL NK+ + R+W   K+V        Y  ++  LV++GDI+ AEK++ EW     
Sbjct: 317 LSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKS 376

Query: 411 NYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEILMEGWVRSQNVARDID 470
           +YD R+ N+L+ AYV+N  LE AE L   ++E GG P+  TWEIL  G  R + ++  + 
Sbjct: 377 SYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALT 436

Query: 471 FLKD 474
            L++
Sbjct: 437 CLRN 440

[Close]

BLAST of Lcy01g012530 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-58
Identity = 121/329 (36.78%), Postives = 188/329 (57.14%), Query Frame = 0


Query: 141 QKLYKSKRFARALEVLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIAS 200
           +KL     +  AL++  +ME R  +  + +D A+ L+L  K + +   E YF  LP  + 
Sbjct: 63  KKLRNRGLYYPALKLSEVMEER-GMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSK 122

Query: 201 QKASSLPLLHGYVKARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVI 260
            + +   LL+ Y K   TEKAE  + K+++L +      YN +M LY  T +TEKVP +I
Sbjct: 123 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 182

Query: 261 RDMKQNQIMRNVLSYNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQ 320
           +++K   +M +  +YN+WM A +    +  VE V +EM  D  V   W+T S +A +Y+ 
Sbjct: 183 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVD 242

Query: 321 AGLVNKAFAALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCAN 380
           AGL  KA  AL++ E K +  +   Y FLITLY  L     V R+WR  +    + +   
Sbjct: 243 AGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVA 302

Query: 381 YMCILLCLVKLGDIDEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRIL 440
           Y+ ++  LVKL D+  AE +F+EW+ +C  YDIR+ NVL+GAY + GL++KA  L  +  
Sbjct: 303 YLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAP 362

Query: 441 ERGGSPNCKTWEILMEGWVRSQNVARDID 470
            RGG  N KTWEI M+ +V+S ++AR ++
Sbjct: 363 RRGGKLNAKTWEIFMDYYVKSGDMARALE 390

[Close]

BLAST of Lcy01g012530 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.5e-51
Identity = 124/429 (28.90%), Postives = 225/429 (52.45%), Query Frame = 0


Query: 51  ESVMKTSLRSGTGRIH--FLLEAWRPISSVTSPV--------EGTISTVSPNTLQNGDDD 110
           ++++  S R     IH  F   A   + + T+PV        +G  S     T+  G D 
Sbjct: 3   KNMLVRSARPTLASIHRLFSAAAAATVDTATAPVVKPRSGGGKGGESANKKETVVGGRD- 62

Query: 111 GNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALEVLMLME 170
                  +     + S    ++    E       +L R+ ++L K KR+  ALE+   M 
Sbjct: 63  -TLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMV 122

Query: 171 TRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVKARNTEK 230
            + ++++   D+A+ L+L  K++GL  AE++F  +P+     A+   LLH YV+ + ++K
Sbjct: 123 VQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDK 182

Query: 231 AEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLSYNLWMN 290
           AEA   K+ + G +     YN M+ +Y++  Q EKVP++I+++K  +   ++++YNLW+ 
Sbjct: 183 AEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLWLT 242

Query: 291 ACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDAEKKLSP 350
           A +    V   E VY +   +K +   W T S L  +Y +   V KA  ALK+ EK +S 
Sbjct: 243 AFASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSK 302

Query: 351 CNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDIDEAEKI 410
            NR+ Y  LI+L+A+L +K+GV   W+  K+   +   A Y+ ++  +VKLG+ ++A+ +
Sbjct: 303 KNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGL 362

Query: 411 FREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEILMEGWVR 470
           + EWE      D R+ N++L  Y+    +   E  + RI+E+G +P+  TWEIL   +++
Sbjct: 363 YDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLK 422

[Close]

BLAST of Lcy01g012530 vs. ExPASy Swiss-Prot
Match: Q9FZ24 (Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g02370 PE=2 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.5e-49
Identity = 111/321 (34.58%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 136 LRRVAQKLYKSKRFARALEVLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQL 195
           L R A+ L K +R   A E+   ME R  +  S +DHA+ L+L  K +GL  AE YFN L
Sbjct: 106 LFRCAKTLRKFRRPQHAFEIFDWMEKR-KMTFSVSDHAICLDLIGKTKGLEAAENYFNNL 165

Query: 196 -PNIASQKASSLPLLHGYVKARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTE 255
            P+  + +++   L++ Y      EKA+A    + +L  V +   +N MM +Y+  SQ E
Sbjct: 166 DPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPE 225

Query: 256 KVPLVIRDMKQNQIMRNVLSYNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTL 315
           KVP+++  MKQ  I    ++Y++WM +C  +  +  +E +  EM  D   +  W+T S L
Sbjct: 226 KVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNL 285

Query: 316 AKVYIQAGLVNKAFAALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSG 375
           A +Y +AGL  KA +ALK  E+K++P NR  + FL++LYA ++    V R+W   K    
Sbjct: 286 AAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARP 345

Query: 376 RPTCANYMCILLCLVKLGDIDEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAES 435
                +Y+ +L  + KLGD+D  +KIF EWE  C  YD+R++N+ +  Y++  + E+AE 
Sbjct: 346 EVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEK 405

Query: 436 LHMRILERGGSPNCKTWEILM 456
           +    +++   P  K  ++LM
Sbjct: 406 ILDGAMKKSKGPFSKARQLLM 425

[Close]

BLAST of Lcy01g012530 vs. ExPASy TrEMBL
Match: A0A6J1KAM1 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492138 PE=4 SV=1)

HSP 1 Score: 729.6 bits (1882), Expect = 8.7e-207
Identity = 371/447 (83.00%), Postives = 406/447 (90.83%), Query Frame = 0


Query: 37  MTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVEGT--ISTVSPNTL 96
           MTRWLGA E+AART+SVMKT+LRSGTGRIHFLL AWRPISS TSPV+ +  IS VSP TL
Sbjct: 1   MTRWLGASEVAARTKSVMKTTLRSGTGRIHFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 97  QNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALE 156
           Q G D+GNFK++FMK K PRSS+TTVLQSGN EAQRTSI KLRRV +KL KSKRF RALE
Sbjct: 61  QKGGDNGNFKQDFMKLKQPRSSVTTVLQSGNSEAQRTSITKLRRVVKKLCKSKRFERALE 120

Query: 157 VLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVK 216
           VLMLMET+N +R+S ADHALRLELTIK+ GLLKAEE+FNQLPNIASQKASSL LLHGYVK
Sbjct: 121 VLMLMETQNKIRMSPADHALRLELTIKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVK 180

Query: 217 ARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLS 276
            +NTEKAEAFM KL+ LGLVVDPHLYNEMMKLYVATSQ EKVPLVI+DMKQNQI+RNVLS
Sbjct: 181 EQNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNQILRNVLS 240

Query: 277 YNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDA 336
           YNLWMNACSE+YGVGSVELVY+EML+DKNVQVGWSTLSTLAKVY QAGLV+KAFAAL++A
Sbjct: 241 YNLWMNACSELYGVGSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALREA 300

Query: 337 EKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDI 396
           EKKLS  NRLGYFFLITLYA+LN+KEGVLR+W  SKAVS RPTCANYMCILLCLVKLGDI
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDI 360

Query: 397 DEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEIL 456
           +EAEKIF+EWE DCRNYDIRVSNVLLGAYVRNGLL++AESLHM  LERGG+PN KTWEIL
Sbjct: 361 NEAEKIFKEWELDCRNYDIRVSNVLLGAYVRNGLLDQAESLHMHTLERGGTPNYKTWEIL 420

Query: 457 MEGWVRSQNVARDIDFL-KDFALLKCH 481
           MEG VRSQN+ R I+FL  DFA LKCH
Sbjct: 421 MEGCVRSQNLDRGINFLNNDFAGLKCH 447

[Close]

BLAST of Lcy01g012530 vs. ExPASy TrEMBL
Match: A0A6J1HF62 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462481 PE=4 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 2.0e-203
Identity = 367/447 (82.10%), Postives = 402/447 (89.93%), Query Frame = 0


Query: 37  MTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVEGT--ISTVSPNTL 96
           MTRWLGA E+AART+SVMKT+LRSGTGRI+FLL AWRPISS TSPV+ +  IS VSP TL
Sbjct: 1   MTRWLGASEVAARTKSVMKTTLRSGTGRINFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 97  QNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALE 156
           Q G D+GNFK++FMK K PRSS+TTVLQSGN EAQRTSI KLRRV +KL K KRF RALE
Sbjct: 61  QKGGDNGNFKQDFMKLKQPRSSVTTVLQSGNSEAQRTSITKLRRVVKKLCKPKRFERALE 120

Query: 157 VLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVK 216
           VLMLMET+N +R+S ADHALRLELTIK+ GLLKAEE+FNQLPNIASQKASSL LLHGYVK
Sbjct: 121 VLMLMETQNKIRMSPADHALRLELTIKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVK 180

Query: 217 ARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLS 276
            +NTEKAEAFM KL+ LGLVVDPHLYNEMMKLYVATSQ EKVPLVI+DMKQN I+RNVLS
Sbjct: 181 EKNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNHILRNVLS 240

Query: 277 YNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDA 336
           YNLWMNACSE+YG  SVELVY+EML+DKNVQVGWSTLSTLAKVY QAGLV+KAFAALK A
Sbjct: 241 YNLWMNACSELYGFRSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALKAA 300

Query: 337 EKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDI 396
           EKKLS  NRLGYFFLITLYA+LN+KEGVLR+W  SKAVS RPTCANYMCILLCLVKLGD+
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDL 360

Query: 397 DEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEIL 456
           +EAEKIF+EWE DCRNYDIRVSNVLLGAYVRNGLLEKAESLHM  LERGG+PN KTWEIL
Sbjct: 361 NEAEKIFKEWELDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMHTLERGGTPNYKTWEIL 420

Query: 457 MEGWVRSQNVARDIDFLK-DFALLKCH 481
           MEG VRSQN+ R I+FL+ +FA LKCH
Sbjct: 421 MEGCVRSQNLDRGINFLENNFAGLKCH 447

[Close]

BLAST of Lcy01g012530 vs. ExPASy TrEMBL
Match: A0A6J1BVG4 (pentatricopeptide repeat-containing protein At5g27460-like OS=Momordica charantia OX=3673 GN=LOC111005082 PE=4 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 1.4e-196
Identity = 355/433 (81.99%), Postives = 385/433 (88.91%), Query Frame = 0


Query: 53  VMKTSLRSGTGRIHFLLEAWRPISSVTSPVE----GTISTVSPNTLQNGDDDGNFKREFM 112
           +M+T LRSG GR+HFLLEAWRPISS+ SP       TIS VSP TL+ G DD NFKRE  
Sbjct: 1   MMRTYLRSGAGRVHFLLEAWRPISSLISPSPVNSFCTISAVSPKTLKYGGDDDNFKRESK 60

Query: 113 KFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALEVLMLMETRNNLRIS 172
           K K PRSS+TTVLQSGNRE QR SI KLR+V +KL KSKRFA ALEVLMLMETRN LR+S
Sbjct: 61  KIKLPRSSVTTVLQSGNRETQRISITKLRKVTKKLCKSKRFASALEVLMLMETRNKLRMS 120

Query: 173 TADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVKARNTEKAEAFMVKL 232
            ADHALRLELTIKL GLL+AEEYF++LPNIASQKASSLPLLHGYVK RNTEKAEAFM+KL
Sbjct: 121 PADHALRLELTIKLHGLLEAEEYFSKLPNIASQKASSLPLLHGYVKDRNTEKAEAFMMKL 180

Query: 233 RDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEIYGV 292
           +DLGLVV+PHLYNEMMKLYVATSQ EKVPLVIRDMKQNQIMRNVLSYNLWMNACSE+YGV
Sbjct: 181 KDLGLVVEPHLYNEMMKLYVATSQNEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEMYGV 240

Query: 293 GSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDAEKKLSPCNRLGYFF 352
           GSVE V+KEML D+NVQVGWSTLSTLAKVYI+AG+V KAF+ALKDAEKKLSPCNRLGYFF
Sbjct: 241 GSVEWVHKEMLKDENVQVGWSTLSTLAKVYIEAGVVEKAFSALKDAEKKLSPCNRLGYFF 300

Query: 353 LITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDIDEAEKIFREWEFDC 412
           LITLYASLNNKEGVLRLWR SKAV GRPTCANYMC+LLCLVKLG+I+EAEK F+EWE  C
Sbjct: 301 LITLYASLNNKEGVLRLWRASKAVIGRPTCANYMCLLLCLVKLGEIEEAEKKFKEWELSC 360

Query: 413 RNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEILMEGWVRSQNVARDI 472
           RNYDIRVSNVLLGAYVRNGLLEKAE LH+R LERGGSPN KTWEILMEGW++ QN+ R I
Sbjct: 361 RNYDIRVSNVLLGAYVRNGLLEKAELLHLRTLERGGSPNYKTWEILMEGWMKRQNMDRAI 420

Query: 473 DFL-KDFALLKCH 481
           D L KD+ LLK H
Sbjct: 421 DSLKKDYDLLKHH 433

[Close]

BLAST of Lcy01g012530 vs. ExPASy TrEMBL
Match: A0A5A7VI21 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004540 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.2e-192
Identity = 350/438 (79.91%), Postives = 382/438 (87.21%), Query Frame = 0


Query: 37  MTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVE--GTISTVSPNTL 96
           MT WL A E+AARTE VMK  LRSGTGRI+FLL+AWR ISS+TSPV+   T S VS   L
Sbjct: 1   MTLWLRALEVAARTEPVMKMPLRSGTGRIYFLLQAWRSISSLTSPVDSLATNSVVSSKIL 60

Query: 97  QNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALE 156
           QNG DDGNFK+EF K K PR S+ TVLQSGN EAQRTSI KLR V +K  K+KRF RAL+
Sbjct: 61  QNGGDDGNFKQEFRKLKLPRRSVNTVLQSGNCEAQRTSITKLRCVVKKFCKTKRFERALK 120

Query: 157 VLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVK 216
            LMLMETR+N R+  A++ALRLELTIK  GLLKAEEYFNQLP IASQKASSLPLLHGYVK
Sbjct: 121 ALMLMETRDNFRMYPAEYALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVK 180

Query: 217 ARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLS 276
            RNTEKAEAFMVKLRDLGLVV+ HLYNEMMKLYVAT Q EKVPLVI+DMKQNQI RNVLS
Sbjct: 181 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLS 240

Query: 277 YNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDA 336
           YNLWMNACS++YGV S+ELV++EMLTDKNVQVGWST+ TLAKVYIQ GLV KAFAALK+A
Sbjct: 241 YNLWMNACSQVYGVRSIELVFEEMLTDKNVQVGWSTMCTLAKVYIQEGLVEKAFAALKEA 300

Query: 337 EKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDI 396
           EKKLSPC RLGYFFLITLYASL +KEGVLR+WR SKAVSG PTCANYMCILLCLVKLG++
Sbjct: 301 EKKLSPCKRLGYFFLITLYASLKDKEGVLRVWRASKAVSGNPTCANYMCILLCLVKLGEM 360

Query: 397 DEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEIL 456
           D+AEK+F+EWEF+CRNYDIRVSNVLLGAYVRNGLLEKAESLH   L RGGSPN KTWEIL
Sbjct: 361 DKAEKVFKEWEFNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGSPNYKTWEIL 420

Query: 457 MEGWVRS-QNVARDIDFL 472
           MEGWVRS QNV R I+FL
Sbjct: 421 MEGWVRSQQNVDRAINFL 438

[Close]

BLAST of Lcy01g012530 vs. ExPASy TrEMBL
Match: A0A1S3BBE1 (pentatricopeptide repeat-containing protein At5g27460 OS=Cucumis melo OX=3656 GN=LOC103488093 PE=4 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 1.2e-192
Identity = 350/438 (79.91%), Postives = 382/438 (87.21%), Query Frame = 0


Query: 37  MTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVE--GTISTVSPNTL 96
           MT WL A E+AARTE VMK  LRSGTGRI+FLL+AWR ISS+TSPV+   T S VS   L
Sbjct: 1   MTLWLRALEVAARTEPVMKMPLRSGTGRIYFLLQAWRSISSLTSPVDSLATNSVVSSKIL 60

Query: 97  QNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALE 156
           QNG DDGNFK+EF K K PR S+ TVLQSGN EAQRTSI KLR V +K  K+KRF RAL+
Sbjct: 61  QNGGDDGNFKQEFRKLKLPRRSVNTVLQSGNCEAQRTSITKLRCVVKKFCKTKRFERALK 120

Query: 157 VLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVK 216
            LMLMETR+N R+  A++ALRLELTIK  GLLKAEEYFNQLP IASQKASSLPLLHGYVK
Sbjct: 121 ALMLMETRDNFRMYPAEYALRLELTIKAHGLLKAEEYFNQLPTIASQKASSLPLLHGYVK 180

Query: 217 ARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLS 276
            RNTEKAEAFMVKLRDLGLVV+ HLYNEMMKLYVAT Q EKVPLVI+DMKQNQI RNVLS
Sbjct: 181 ERNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATYQNEKVPLVIKDMKQNQIPRNVLS 240

Query: 277 YNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDA 336
           YNLWMNACS++YGV S+ELV++EMLTDKNVQVGWST+ TLAKVYIQ GLV KAFAALK+A
Sbjct: 241 YNLWMNACSQVYGVRSIELVFEEMLTDKNVQVGWSTMCTLAKVYIQEGLVEKAFAALKEA 300

Query: 337 EKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDI 396
           EKKLSPC RLGYFFLITLYASL +KEGVLR+WR SKAVSG PTCANYMCILLCLVKLG++
Sbjct: 301 EKKLSPCKRLGYFFLITLYASLKDKEGVLRVWRASKAVSGNPTCANYMCILLCLVKLGEM 360

Query: 397 DEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEIL 456
           D+AEK+F+EWEF+CRNYDIRVSNVLLGAYVRNGLLEKAESLH   L RGGSPN KTWEIL
Sbjct: 361 DKAEKVFKEWEFNCRNYDIRVSNVLLGAYVRNGLLEKAESLHRHTLGRGGSPNYKTWEIL 420

Query: 457 MEGWVRS-QNVARDIDFL 472
           MEGWVRS QNV R I+FL
Sbjct: 421 MEGWVRSQQNVDRAINFL 438

[Close]

BLAST of Lcy01g012530 vs. NCBI nr
Match: XP_038885083.1 (pentatricopeptide repeat-containing protein At5g27460 [Benincasa hispida])

HSP 1 Score: 734.9 bits (1896), Expect = 4.3e-208
Identity = 375/455 (82.42%), Postives = 405/455 (89.01%), Query Frame = 0


Query: 25  IVFRANEQARQSMTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVE- 84
           I+ RAN QA+QSMTRWL A E+AARTESVMK  LRSGT RIHFL +AW+PISS+TSPV+ 
Sbjct: 2   ILLRANAQAKQSMTRWLRASEVAARTESVMKAPLRSGTERIHFLFQAWKPISSLTSPVDS 61

Query: 85  -GTISTVSPNTLQNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQK 144
              IS VSP TLQN  DDGN K+EFMK K PRSS++TVLQSG  EAQRTSI KLRRV +K
Sbjct: 62  LSNISAVSPKTLQNSVDDGNSKQEFMKLKLPRSSVSTVLQSGKCEAQRTSITKLRRVVKK 121

Query: 145 LYKSKRFARALEVLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQK 204
           LY SKRF RALEVLMLMETR+NLR+S A+HALRLELTIK+ G+LKAEEYFNQLP IASQK
Sbjct: 122 LYTSKRFERALEVLMLMETRDNLRMSPAEHALRLELTIKVHGVLKAEEYFNQLPTIASQK 181

Query: 205 ASSLPLLHGYVKARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRD 264
           ASSLPLLHGYVK RNTEKAEAFMVKLRDLGLVV+ HLYNEMMKLYVATSQ EKVPLVIRD
Sbjct: 182 ASSLPLLHGYVKGRNTEKAEAFMVKLRDLGLVVNHHLYNEMMKLYVATSQNEKVPLVIRD 241

Query: 265 MKQNQIMRNVLSYNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAG 324
           MKQNQI RNVLSYNLWMNACSE+YGVGSVELV++EMLTDKNVQVGWSTLSTLAKVYIQ  
Sbjct: 242 MKQNQIQRNVLSYNLWMNACSEVYGVGSVELVFEEMLTDKNVQVGWSTLSTLAKVYIQED 301

Query: 325 LVNKAFAALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYM 384
           LV+KAFAALKDAEKKLSPCNRLGYFFLITLYASL +K+GV R+WR SKAVSGRPTCANYM
Sbjct: 302 LVDKAFAALKDAEKKLSPCNRLGYFFLITLYASLKDKKGVSRVWRASKAVSGRPTCANYM 361

Query: 385 CILLCLVKLGDIDEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILER 444
           CILLCLVK+GDIDEAEK+F+EWE +CRNYDIRVSNVLLGAYVRNGLLEKAESLHM  L R
Sbjct: 362 CILLCLVKVGDIDEAEKVFKEWELNCRNYDIRVSNVLLGAYVRNGLLEKAESLHMHTLGR 421

Query: 445 GGSPNCKTWEILMEGWVRS-QNVARDIDFLKDFAL 477
           GGSPN KTWEILMEGW R+ QNV R I FL+   L
Sbjct: 422 GGSPNYKTWEILMEGWARNQQNVDRAISFLRKILL 456

[Close]

BLAST of Lcy01g012530 vs. NCBI nr
Match: XP_022997144.1 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 [Cucurbita maxima])

HSP 1 Score: 729.6 bits (1882), Expect = 1.8e-206
Identity = 371/447 (83.00%), Postives = 406/447 (90.83%), Query Frame = 0


Query: 37  MTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVEGT--ISTVSPNTL 96
           MTRWLGA E+AART+SVMKT+LRSGTGRIHFLL AWRPISS TSPV+ +  IS VSP TL
Sbjct: 1   MTRWLGASEVAARTKSVMKTTLRSGTGRIHFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 97  QNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALE 156
           Q G D+GNFK++FMK K PRSS+TTVLQSGN EAQRTSI KLRRV +KL KSKRF RALE
Sbjct: 61  QKGGDNGNFKQDFMKLKQPRSSVTTVLQSGNSEAQRTSITKLRRVVKKLCKSKRFERALE 120

Query: 157 VLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVK 216
           VLMLMET+N +R+S ADHALRLELTIK+ GLLKAEE+FNQLPNIASQKASSL LLHGYVK
Sbjct: 121 VLMLMETQNKIRMSPADHALRLELTIKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVK 180

Query: 217 ARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLS 276
            +NTEKAEAFM KL+ LGLVVDPHLYNEMMKLYVATSQ EKVPLVI+DMKQNQI+RNVLS
Sbjct: 181 EQNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNQILRNVLS 240

Query: 277 YNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDA 336
           YNLWMNACSE+YGVGSVELVY+EML+DKNVQVGWSTLSTLAKVY QAGLV+KAFAAL++A
Sbjct: 241 YNLWMNACSELYGVGSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALREA 300

Query: 337 EKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDI 396
           EKKLS  NRLGYFFLITLYA+LN+KEGVLR+W  SKAVS RPTCANYMCILLCLVKLGDI
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDI 360

Query: 397 DEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEIL 456
           +EAEKIF+EWE DCRNYDIRVSNVLLGAYVRNGLL++AESLHM  LERGG+PN KTWEIL
Sbjct: 361 NEAEKIFKEWELDCRNYDIRVSNVLLGAYVRNGLLDQAESLHMHTLERGGTPNYKTWEIL 420

Query: 457 MEGWVRSQNVARDIDFL-KDFALLKCH 481
           MEG VRSQN+ R I+FL  DFA LKCH
Sbjct: 421 MEGCVRSQNLDRGINFLNNDFAGLKCH 447

[Close]

BLAST of Lcy01g012530 vs. NCBI nr
Match: XP_023545813.1 (pentatricopeptide repeat-containing protein At5g27460 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 728.4 bits (1879), Expect = 4.0e-206
Identity = 375/447 (83.89%), Postives = 402/447 (89.93%), Query Frame = 0


Query: 37  MTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVEGT--ISTVSPNTL 96
           MTRWLGA E+AART SVMKT+LRSGTGRIHFLL AWRPISS TSPV+ +  IS VSP TL
Sbjct: 1   MTRWLGASEVAARTNSVMKTTLRSGTGRIHFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 97  QNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALE 156
           Q G D+GNFK++FMK KSPRSS+TTVLQSGN EAQRTSI KLRRV +KL KSKRF RALE
Sbjct: 61  QKGGDNGNFKQDFMKLKSPRSSVTTVLQSGNCEAQRTSITKLRRVVKKLCKSKRFERALE 120

Query: 157 VLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVK 216
           VLMLMET+N +R+S ADHALRLELTIKL GLLKAEE FNQLPNIASQKASSL LLHGYVK
Sbjct: 121 VLMLMETQNKIRMSPADHALRLELTIKLHGLLKAEELFNQLPNIASQKASSLLLLHGYVK 180

Query: 217 ARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLS 276
            +NTEKAEAFM KL+ LGLVVDPHLYNEMMKLYVATSQ EKVPLVI+DMKQN I+RNVLS
Sbjct: 181 EKNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNHILRNVLS 240

Query: 277 YNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDA 336
           YNLWMNACSE+YGV SVELVY+EML+DKNVQVGWSTLSTLAKVY QAGLV+KAFAALK A
Sbjct: 241 YNLWMNACSELYGVRSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALKAA 300

Query: 337 EKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDI 396
           EKKLS  NRLGYFFLITLYA+LN+KEGVLR+W  SKAVS RPTCANYMCILLCLVKLGDI
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDI 360

Query: 397 DEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEIL 456
            EAEKIF+EWE DCRNYDIRVSNVLLGAYVRNGLLEKAESLHM  LERGG+PN KTWEIL
Sbjct: 361 HEAEKIFQEWELDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMHTLERGGTPNYKTWEIL 420

Query: 457 MEGWVRSQNVARDIDFLK-DFALLKCH 481
           MEG VRSQN+ R I+FLK DFA LKCH
Sbjct: 421 MEGCVRSQNLDRGINFLKNDFAGLKCH 447

[Close]

BLAST of Lcy01g012530 vs. NCBI nr
Match: KAG6598713.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 719.5 bits (1856), Expect = 1.9e-203
Identity = 368/447 (82.33%), Postives = 401/447 (89.71%), Query Frame = 0


Query: 37  MTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVEGT--ISTVSPNTL 96
           MT WLGA E+AART+SVMKT+LRSG GRIHFLL AWRPISS TSPV+ +  IS VSP TL
Sbjct: 1   MTLWLGASEVAARTKSVMKTTLRSGAGRIHFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 97  QNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALE 156
           Q G D+GNFK++FMK K PRSS+TTVLQSGN EAQRTSI KLRRV +KL KSKRF RALE
Sbjct: 61  QKGGDNGNFKQDFMKLKQPRSSVTTVLQSGNSEAQRTSITKLRRVVKKLCKSKRFERALE 120

Query: 157 VLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVK 216
            LMLMET+N +R+S ADHALRLELTIK+ GLLKAEE+FNQLPNIASQKASSL LLHGYVK
Sbjct: 121 ALMLMETQNKIRMSPADHALRLELTIKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVK 180

Query: 217 ARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLS 276
            +NTEKAEAFM KL+ LGLVVDPHLYNEMMKLYVATSQ EKVPLVI+DMKQN I+RNVLS
Sbjct: 181 EKNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNHILRNVLS 240

Query: 277 YNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDA 336
           YNLWMNACSE+YGV SVELVY+EML+DKNVQVGWSTLSTLAKVY QAGLV+KAFAALK A
Sbjct: 241 YNLWMNACSELYGVRSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALKAA 300

Query: 337 EKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDI 396
           EKKLS  NRLGYFFLITLYA+LN+KEGVLR+W  SKAVS RPTCANYMCILLCLVKLGDI
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDI 360

Query: 397 DEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEIL 456
           +EAEKIF+EWE DCRNYDIRVSNVLLGAYVRNGLLEKAESLHM  LERGG+PN KTWEIL
Sbjct: 361 NEAEKIFKEWELDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMHTLERGGTPNYKTWEIL 420

Query: 457 MEGWVRSQNVARDIDFLK-DFALLKCH 481
           MEG VRSQN+ R I+FL+ +FA LKCH
Sbjct: 421 MEGCVRSQNLDRGINFLENNFAGLKCH 447

[Close]

BLAST of Lcy01g012530 vs. NCBI nr
Match: XP_022961834.1 (pentatricopeptide repeat-containing protein At5g27460 isoform X1 [Cucurbita moschata])

HSP 1 Score: 718.4 bits (1853), Expect = 4.2e-203
Identity = 367/447 (82.10%), Postives = 402/447 (89.93%), Query Frame = 0


Query: 37  MTRWLGAPEIAARTESVMKTSLRSGTGRIHFLLEAWRPISSVTSPVEGT--ISTVSPNTL 96
           MTRWLGA E+AART+SVMKT+LRSGTGRI+FLL AWRPISS TSPV+ +  IS VSP TL
Sbjct: 1   MTRWLGASEVAARTKSVMKTTLRSGTGRINFLLRAWRPISSHTSPVDSSDIISAVSPKTL 60

Query: 97  QNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALE 156
           Q G D+GNFK++FMK K PRSS+TTVLQSGN EAQRTSI KLRRV +KL K KRF RALE
Sbjct: 61  QKGGDNGNFKQDFMKLKQPRSSVTTVLQSGNSEAQRTSITKLRRVVKKLCKPKRFERALE 120

Query: 157 VLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVK 216
           VLMLMET+N +R+S ADHALRLELTIK+ GLLKAEE+FNQLPNIASQKASSL LLHGYVK
Sbjct: 121 VLMLMETQNKIRMSPADHALRLELTIKVHGLLKAEEHFNQLPNIASQKASSLLLLHGYVK 180

Query: 217 ARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLS 276
            +NTEKAEAFM KL+ LGLVVDPHLYNEMMKLYVATSQ EKVPLVI+DMKQN I+RNVLS
Sbjct: 181 EKNTEKAEAFMAKLKGLGLVVDPHLYNEMMKLYVATSQNEKVPLVIKDMKQNHILRNVLS 240

Query: 277 YNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDA 336
           YNLWMNACSE+YG  SVELVY+EML+DKNVQVGWSTLSTLAKVY QAGLV+KAFAALK A
Sbjct: 241 YNLWMNACSELYGFRSVELVYEEMLSDKNVQVGWSTLSTLAKVYTQAGLVHKAFAALKAA 300

Query: 337 EKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDI 396
           EKKLS  NRLGYFFLITLYA+LN+KEGVLR+W  SKAVS RPTCANYMCILLCLVKLGD+
Sbjct: 301 EKKLSSGNRLGYFFLITLYATLNDKEGVLRVWTASKAVSDRPTCANYMCILLCLVKLGDL 360

Query: 397 DEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEIL 456
           +EAEKIF+EWE DCRNYDIRVSNVLLGAYVRNGLLEKAESLHM  LERGG+PN KTWEIL
Sbjct: 361 NEAEKIFKEWELDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMHTLERGGTPNYKTWEIL 420

Query: 457 MEGWVRSQNVARDIDFLK-DFALLKCH 481
           MEG VRSQN+ R I+FL+ +FA LKCH
Sbjct: 421 MEGCVRSQNLDRGINFLENNFAGLKCH 447

[Close]

BLAST of Lcy01g012530 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 410.6 bits (1054), Expect = 1.7e-114
Identity = 212/410 (51.71%), Postives = 286/410 (69.76%), Query Frame = 0


Query: 77  SVTSPVEGTISTVSPNTLQNGDDDGNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKL 136
           + T  V   +S+++  +  +   + N  +E ++   PR S+T++LQ         S+ +L
Sbjct: 14  NTTGVVSRLVSSLADGSDTSSVANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSEL 73

Query: 137 RRVAQKLYKSKRFARALEVLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQL- 196
           R ++++L +S R+  AL+++  ME + ++  S  D ALRL+L IK  GL + EEYF +L 
Sbjct: 74  RLISKRLIRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLL 133

Query: 197 ---PNIASQKASSLPLLHGYVKARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQ 256
               ++   K++ LPLL  YVK +  ++AEA M KL  LG +V PH +NEMMKLY A+ Q
Sbjct: 134 HSSVSMRVAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQ 193

Query: 257 TEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLS 316
            EKV +V+  MK N+I RNVLSYNLWMNAC E+ GV +VE VYKEM+ DK+V+VGWS+L 
Sbjct: 194 YEKVVMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLC 253

Query: 317 TLAKVYIQAGLVNKAFAALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAV 376
           TLA VYI++G   KA   L+DAEK L+  NRLGYFFLITLYASL NKEGV+RLW  SK+V
Sbjct: 254 TLANVYIKSGFDEKARLVLEDAEKMLNRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSV 313

Query: 377 SGRPTCANYMCILLCLVKLGDIDEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKA 436
            GR +C NY+C+L  LVK GD++EAE++F EWE  C NYD+RVSNVLLGAYVRNG + KA
Sbjct: 314 CGRISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKA 373

Query: 437 ESLHMRILERGGSPNCKTWEILMEGWVRSQNVARDIDFLKDFALL--KCH 481
           ESLH  +LERGG+PN KTWEILMEGWV+ +N+ + ID +    +L  +CH
Sbjct: 374 ESLHGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCH 423

[Close]

BLAST of Lcy01g012530 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 244.2 bits (622), Expect = 2.1e-64
Identity = 132/364 (36.26%), Postives = 216/364 (59.34%), Query Frame = 0


Query: 111 KSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALEVLMLMETR-NNLRIST 170
           + P     +VL    +  ++ +  +L RV ++L K KR  +ALEV   M  R    R+S 
Sbjct: 77  EKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMNNRGERFRLSA 136

Query: 171 ADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVKARNTEKAEAFMVKLR 230
           +D A++L+L  K++G+  AEE+F QLP     +     LL+ YV+A++ EKAEA +  +R
Sbjct: 137 SDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSREKAEALLNTMR 196

Query: 231 DLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLSYNLWMNACSEIYGVG 290
           D G  + P  +N MM LY+   + +KV  ++ +MKQ  I  ++ SYN+W+++C  +  V 
Sbjct: 197 DKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIYSYNIWLSSCGSLGSVE 256

Query: 291 SVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDAEKKLSPCNRLGYFFL 350
            +ELVY++M +D ++   W+T ST+A +YI+ G   KA  AL+  E +++  NR+ Y +L
Sbjct: 257 KMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRKVEARITGRNRIPYHYL 316

Query: 351 ITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDIDEAEKIFREWEFDCR 410
           ++LY SL NK+ + R+W   K+V        Y  ++  LV++GDI+ AEK++ EW     
Sbjct: 317 LSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKS 376

Query: 411 NYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEILMEGWVRSQNVARDID 470
           +YD R+ N+L+ AYV+N  LE AE L   ++E GG P+  TWEIL  G  R + ++  + 
Sbjct: 377 SYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWEILAVGHTRKRCISEALT 436

Query: 471 FLKD 474
            L++
Sbjct: 437 CLRN 440

[Close]

BLAST of Lcy01g012530 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-59
Identity = 121/329 (36.78%), Postives = 188/329 (57.14%), Query Frame = 0


Query: 141 QKLYKSKRFARALEVLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIAS 200
           +KL     +  AL++  +ME R  +  + +D A+ L+L  K + +   E YF  LP  + 
Sbjct: 63  KKLRNRGLYYPALKLSEVMEER-GMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSK 122

Query: 201 QKASSLPLLHGYVKARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVI 260
            + +   LL+ Y K   TEKAE  + K+++L +      YN +M LY  T +TEKVP +I
Sbjct: 123 TELTYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMI 182

Query: 261 RDMKQNQIMRNVLSYNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQ 320
           +++K   +M +  +YN+WM A +    +  VE V +EM  D  V   W+T S +A +Y+ 
Sbjct: 183 QELKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVD 242

Query: 321 AGLVNKAFAALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCAN 380
           AGL  KA  AL++ E K +  +   Y FLITLY  L     V R+WR  +    + +   
Sbjct: 243 AGLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVA 302

Query: 381 YMCILLCLVKLGDIDEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRIL 440
           Y+ ++  LVKL D+  AE +F+EW+ +C  YDIR+ NVL+GAY + GL++KA  L  +  
Sbjct: 303 YLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAP 362

Query: 441 ERGGSPNCKTWEILMEGWVRSQNVARDID 470
            RGG  N KTWEI M+ +V+S ++AR ++
Sbjct: 363 RRGGKLNAKTWEIFMDYYVKSGDMARALE 390

[Close]

BLAST of Lcy01g012530 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 204.1 bits (518), Expect = 2.5e-52
Identity = 124/429 (28.90%), Postives = 225/429 (52.45%), Query Frame = 0


Query: 51  ESVMKTSLRSGTGRIH--FLLEAWRPISSVTSPV--------EGTISTVSPNTLQNGDDD 110
           ++++  S R     IH  F   A   + + T+PV        +G  S     T+  G D 
Sbjct: 3   KNMLVRSARPTLASIHRLFSAAAAATVDTATAPVVKPRSGGGKGGESANKKETVVGGRD- 62

Query: 111 GNFKREFMKFKSPRSSMTTVLQSGNREAQRTSIIKLRRVAQKLYKSKRFARALEVLMLME 170
                  +     + S    ++    E       +L R+ ++L K KR+  ALE+   M 
Sbjct: 63  -TLGGRLLSLVYTKRSAVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMV 122

Query: 171 TRNNLRISTADHALRLELTIKLQGLLKAEEYFNQLPNIASQKASSLPLLHGYVKARNTEK 230
            + ++++   D+A+ L+L  K++GL  AE++F  +P+     A+   LLH YV+ + ++K
Sbjct: 123 VQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDK 182

Query: 231 AEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTEKVPLVIRDMKQNQIMRNVLSYNLWMN 290
           AEA   K+ + G +     YN M+ +Y++  Q EKVP++I+++K  +   ++++YNLW+ 
Sbjct: 183 AEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELK-IRTSPDIVTYNLWLT 242

Query: 291 ACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTLAKVYIQAGLVNKAFAALKDAEKKLSP 350
           A +    V   E VY +   +K +   W T S L  +Y +   V KA  ALK+ EK +S 
Sbjct: 243 AFASGNDVEGAEKVYLKAKEEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSK 302

Query: 351 CNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSGRPTCANYMCILLCLVKLGDIDEAEKI 410
            NR+ Y  LI+L+A+L +K+GV   W+  K+   +   A Y+ ++  +VKLG+ ++A+ +
Sbjct: 303 KNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGL 362

Query: 411 FREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAESLHMRILERGGSPNCKTWEILMEGWVR 470
           + EWE      D R+ N++L  Y+    +   E  + RI+E+G +P+  TWEIL   +++
Sbjct: 363 YDEWESVSGTGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLK 422

[Close]

BLAST of Lcy01g012530 vs. TAIR 10
Match: AT1G02370.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 198.0 bits (502), Expect = 1.8e-50
Identity = 111/321 (34.58%), Postives = 180/321 (56.07%), Query Frame = 0


Query: 136 LRRVAQKLYKSKRFARALEVLMLMETRNNLRISTADHALRLELTIKLQGLLKAEEYFNQL 195
           L R A+ L K +R   A E+   ME R  +  S +DHA+ L+L  K +GL  AE YFN L
Sbjct: 106 LFRCAKTLRKFRRPQHAFEIFDWMEKR-KMTFSVSDHAICLDLIGKTKGLEAAENYFNNL 165

Query: 196 -PNIASQKASSLPLLHGYVKARNTEKAEAFMVKLRDLGLVVDPHLYNEMMKLYVATSQTE 255
            P+  + +++   L++ Y      EKA+A    + +L  V +   +N MM +Y+  SQ E
Sbjct: 166 DPSAKNHQSTYGALMNCYCVELEEEKAKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPE 225

Query: 256 KVPLVIRDMKQNQIMRNVLSYNLWMNACSEIYGVGSVELVYKEMLTDKNVQVGWSTLSTL 315
           KVP+++  MKQ  I    ++Y++WM +C  +  +  +E +  EM  D   +  W+T S L
Sbjct: 226 KVPVLVDAMKQRGISPCGVTYSIWMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNL 285

Query: 316 AKVYIQAGLVNKAFAALKDAEKKLSPCNRLGYFFLITLYASLNNKEGVLRLWRGSKAVSG 375
           A +Y +AGL  KA +ALK  E+K++P NR  + FL++LYA ++    V R+W   K    
Sbjct: 286 AAIYTKAGLYEKADSALKSMEEKMNPNNRDSHHFLMSLYAGISKGPEVYRVWESLKKARP 345

Query: 376 RPTCANYMCILLCLVKLGDIDEAEKIFREWEFDCRNYDIRVSNVLLGAYVRNGLLEKAES 435
                +Y+ +L  + KLGD+D  +KIF EWE  C  YD+R++N+ +  Y++  + E+AE 
Sbjct: 346 EVNNLSYLVMLQAMSKLGDLDGIKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAEK 405

Query: 436 LHMRILERGGSPNCKTWEILM 456
           +    +++   P  K  ++LM
Sbjct: 406 ILDGAMKKSKGPFSKARQLLM 425

The following BLAST results are available for this feature:

BLAST of Lcy01g012530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q3E911	2.4e-113	51.71	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]
Q8LPS6	3.0e-63	36.26	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
O22714	2.2e-58	36.78	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q9SY07	3.5e-51	28.90	Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop...	[more]
Q9FZ24	2.5e-49	34.58	Pentatricopeptide repeat-containing protein At1g02370, mitochondrial OS=Arabidop...	[more]

BLAST of Lcy01g012530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KAM1	8.7e-207	83.00	pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1HF62	2.0e-203	82.10	pentatricopeptide repeat-containing protein At5g27460 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1BVG4	1.4e-196	81.99	pentatricopeptide repeat-containing protein At5g27460-like OS=Momordica charanti...	[more]
A0A5A7VI21	1.2e-192	79.91	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BBE1	1.2e-192	79.91	pentatricopeptide repeat-containing protein At5g27460 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Lcy01g012530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885083.1	4.3e-208	82.42	pentatricopeptide repeat-containing protein At5g27460 [Benincasa hispida]	[more]
XP_022997144.1	1.8e-206	83.00	pentatricopeptide repeat-containing protein At5g27460 isoform X1 [Cucurbita maxi...	[more]
XP_023545813.1	4.0e-206	83.89	pentatricopeptide repeat-containing protein At5g27460 [Cucurbita pepo subsp. pep...	[more]
KAG6598713.1	1.9e-203	82.33	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022961834.1	4.2e-203	82.10	pentatricopeptide repeat-containing protein At5g27460 isoform X1 [Cucurbita mosc...	[more]

BLAST of Lcy01g012530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27460.1	1.7e-114	51.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	2.1e-64	36.26	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	1.6e-59	36.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G02820.1	2.5e-52	28.90	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G02370.1	1.8e-50	34.58	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 229..282 e-value: 0.0014 score: 18.7
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 417..443 e-value: 4.0E-4 score: 20.4 coord: 381..404 e-value: 0.087 score: 13.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 417..448 e-value: 4.1E-4 score: 18.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 412..446 score: 10.018685
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 104..289 e-value: 6.2E-12 score: 47.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 315..477 e-value: 3.8E-21 score: 77.7
None	No IPR available	PANTHER	PTHR45717:SF13	OS02G0796400 PROTEIN	coord: 84..478
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 84..478

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g012530.1	Lcy01g012530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005515	protein binding