Lcy01g012390 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACGAGATCAGAGCTTCAACGCCGCCGCATGACGACGGCGCAGGGACGTTTTCAGGCGGGAAAGAAGAAGCGTCAGTGATGGATCGCGTTAAGAAGGGGTGCACGTCCTTTTATGCTTCCTCTCAAGAGACACTACGCTATGTCAAAGCCTTTTTCGTTGGTTGGGTGAGTTTATTTATGTTTTTGTTAATTTCACTTTTAAAATACGTATATTTTTGGAAAATACTTCTGCATACTAGACTAGTATACTGGTACTTCCCTACCGACTACCGTTTGACAATTAATGAATTAAGAAAGATTTTATACAATGTAATGCATCCAAATATTATTCTATATATATATATATATATATATATTTTTTTTTTCTCGTTGTAATATCAATAAAAAAAAAAAAGATTCAACAAAACCAGTTTAGTGACACTAAAAATAATTGGTCAAAGAGAAAATGAACGCATGATCAATCAACCCAAAAGTTTAAATTAATGGATTAGGATAAATTTAAGATAGGCTAAATTATAAAAAATGCCCTTGAACTATGAGGTTTGTTTCAAAAATGTCCCTGAACTTTCAAAAGTTTAAAAAATACCCCTGAACTTTGAAGAATGTTTCAAAAATACCCTTGCTGTTAATTTTGGATGGAAACCGTTAAAGTTTGAGTTTCAAAAATACCCTTGAACTTTCAAAAAAAATTCAAAAATACCCTTATTGAAAAATGATTCTTCTTTTTTCCTCCTCTCTCACCGTAAATTTTTTCTCCATGAAAATTAATGCAAAATGTTGCTTATAAAGGTTGTGTGCAACTCAATACCAAATAAAAAAAGACTTTGAAATCAAGTTTTCTCTTTTAAAAAGCGTAAAAAAGATAAGTGTGAGAAAACAACATATATATGTATATATATTATTTCATTTTTTGCTCTCTCTTTGTTTGTGTATCTTAATGATAAGACGAAGAAATGTTTATAAGACGGTGAGTTTGGTCCAATTTATAAGATTAATCAATCAAAAGTTTTATATATGATTTTGTTCTTATTGATATTTAAGAATTGTTAGAATCTTTATACAACAATAGTTTCATTTATTTTTCGTAATAGGAATATAGAGAAAGCTAGGAAATAATATTGAAAAGACTACCAACACATGTAAAATTTCAAGAACAAAACAAAAGTCATCTTGAAGATTCGATACGAAAATCTAGCAAAGTGCTTTAGATGTGTTGAAAGAGAAAGAAAGCTCCTAGATTATGAATACATGACAAATAAGTAAAGTTTCTCATTAATTTTTGGAAGAAGAGTTAATTTACGGTGGGAGAAGGAAAAAAAAAAGAAGCATTTTTCAATAAGGGTATTTTTGATTTTTTTTTTTAAAGTTCAAGGGTATTTTTGAAACTCAAACTTTAACGGTTTCCATCCAAAATTAACGGCAAGGGTATTTTTGAAACATTTTTTAAAGTTCAGGAGTATTTTTGAAACTTTTGAAAGTTCAGGGGCATTTTTGAAACAAACCCCATAGTTCAAGGGTATTTTTTATAATTTAGCCTTTAAGATATTAATGTTAGTTTTTTAGGTTGGCAAATGTTGATTTTTTTTTCTTTCATTTTTTACCTTATTTTAATTATCAAAATTTTAATATAAAGATAAGTATCGACATGCAGTATGAAATAACTATTAGATATATAATCAATGTTCTTTTTTTTTTTGGAAACATACATTATCGAAGGGCCCGTTTGGTAACGTTCTCGTTTCTTGTTTCTTGTTTCCAATTTTATTAAAAAATCTAAGTATTTAATAACTATGTGTGTTTCTTGTTTCTCATTTTTTAGAAAAACTCCCAACATTTGTATAGAACTTTTGGGAACAAATAAAACTAGTTTCTCTTTTTTTCTTGTTTCCAATTTTTTCCAAACATAAATAAGAATATAGGTTTATTATTATTGAATGTATAAGCGTTAGAGTCATGAAATTCTATTTTTCTTTATTAAAAACGAAGAAATGGTAACAAGAAACAAGAACGTTACCAAACGGGCTCGAAGTTTCTTTTAATTCAACCACACAGTTGTTTCAACAATATTTGGATAGAAAATTCGAATCTCTAACCTTTTGATGGGGATATATGCCAATTACTGTTGACTATGCCTACCTCGTTGTTTGTGTAGTTTTTCACTCATTTATGAAACGGTATAAAACTAACGGTTAAGTTGTGGTAGATTTTAATAAGGCGATGTTTGGTTGGTGTGGTTGGCTGGTAGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGTGGCAGAAGCAGAATTAAAGTCGGCCAAAATGCAGGTTGAAGCTACCGAGGCCGCAGAGAACACCAAGAAGCAACTTAACAAATCAATGTAA ATGGACGAGATCAGAGCTTCAACGCCGCCGCATGACGACGGCGCAGGGACGTTTTCAGGCGGGAAAGAAGAAGCGTCAGTGATGGATCGCGTTAAGAAGGGGTGCACGTCCTTTTATGCTTCCTCTCAAGAGACACTACGCTATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGTGGCAGAAGCAGAATTAAAGTCGGCCAAAATGCAGGTTGAAGCTACCGAGGCCGCAGAGAACACCAAGAAGCAACTTAACAAATCAATGTAA ATGGACGAGATCAGAGCTTCAACGCCGCCGCATGACGACGGCGCAGGGACGTTTTCAGGCGGGAAAGAAGAAGCGTCAGTGATGGATCGCGTTAAGAAGGGGTGCACGTCCTTTTATGCTTCCTCTCAAGAGACACTACGCTATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGTGGCAGAAGCAGAATTAAAGTCGGCCAAAATGCAGGTTGAAGCTACCGAGGCCGCAGAGAACACCAAGAAGCAACTTAACAAATCAATGTAA MDEIRASTPPHDDGAGTFSGGKEEASVMDRVKKGCTSFYASSQETLRYVKAFFVGWGKKMTAKSEKEVAEAELKSAKMQVEATEAAENTKKQLNKSM Homology
BLAST of Lcy01g012390 vs. ExPASy TrEMBL
Match: A0A6J1KRV8 (uncharacterized protein LOC111495934 OS=Cucurbita maxima OX=3661 GN=LOC111495934 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 7.5e-33 Identity = 81/92 (88.04%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Lcy01g012390 vs. ExPASy TrEMBL
Match: A0A6J1GHI8 (uncharacterized protein LOC111454014 OS=Cucurbita moschata OX=3662 GN=LOC111454014 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.4e-31 Identity = 79/96 (82.29%), Postives = 82/96 (85.42%), Query Frame = 0
BLAST of Lcy01g012390 vs. ExPASy TrEMBL
Match: A0A5A7VBV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004430 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 7.0e-31 Identity = 77/92 (83.70%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of Lcy01g012390 vs. ExPASy TrEMBL
Match: A0A1S3BC67 (uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=4 SV=1) HSP 1 Score: 141.7 bits (356), Expect = 1.6e-30 Identity = 76/92 (82.61%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of Lcy01g012390 vs. ExPASy TrEMBL
Match: A0A6J1BRY6 (uncharacterized protein LOC111005010 OS=Momordica charantia OX=3673 GN=LOC111005010 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 3.0e-21 Identity = 56/67 (83.58%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of Lcy01g012390 vs. NCBI nr
Match: XP_023001883.1 (uncharacterized protein LOC111495934 [Cucurbita maxima]) HSP 1 Score: 149.4 bits (376), Expect = 1.6e-32 Identity = 81/92 (88.04%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Lcy01g012390 vs. NCBI nr
Match: XP_022951050.1 (uncharacterized protein LOC111454014 [Cucurbita moschata] >KAG6585352.1 hypothetical protein SDJN03_18085, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145.2 bits (365), Expect = 2.9e-31 Identity = 79/96 (82.29%), Postives = 82/96 (85.42%), Query Frame = 0
BLAST of Lcy01g012390 vs. NCBI nr
Match: KAG7020262.1 (hypothetical protein SDJN02_16945, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144.4 bits (363), Expect = 5.0e-31 Identity = 79/98 (80.61%), Postives = 82/98 (83.67%), Query Frame = 0
BLAST of Lcy01g012390 vs. NCBI nr
Match: KAA0065108.1 (hypothetical protein E6C27_scaffold82G004430 [Cucumis melo var. makuwa]) HSP 1 Score: 142.9 bits (359), Expect = 1.5e-30 Identity = 77/92 (83.70%), Postives = 82/92 (89.13%), Query Frame = 0
BLAST of Lcy01g012390 vs. NCBI nr
Match: XP_038886259.1 (uncharacterized protein LOC120076486 [Benincasa hispida]) HSP 1 Score: 142.1 bits (357), Expect = 2.5e-30 Identity = 78/92 (84.78%), Postives = 83/92 (90.22%), Query Frame = 0
BLAST of Lcy01g012390 vs. TAIR 10
Match: AT2G38465.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 2.2e-13 Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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