Lcy01g012170 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g012170
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	AT-hook motif nuclear-localized protein
Location	Chr01: 32994393 .. 32995400 (-)
RNA-Seq Expression	Lcy01g012170
Synteny	Lcy01g012170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTTCTTCATCCATTCCTCCCTTTCTCTCTCTTTCTTTAAATTTTTTAAAAAGAAAAGAAAAACATTACTTTAAAGAAAAAAAAAATAGAAATTTGGGGATTTTGAAGAAAAGAAATGAAAGGCGATTTCGCTCACCCCAAGAGCAAGACTTCCAATATGTTATCTAAATTCCATCTCACCCACCCGTTTACCCACCCTCCGCCGCAGCAACCCGACGACGATTCCACCGCCGCCGCCGTTCCTCCGCCCTTTAAACATCTCTCCGACCACAACTCTGCCGCGGATGGCTCCACGATTGAGTTGGTCCGACGGCCGAGGGGTCGCCCACCGGGGTCCAAGAATAAACCGAAACCGCCTCTTGTCATAACCCGGGAACCCGAACCGGCTATGCGGCCGTACGTTCTAGAAGTGCCCGGTGGAAACGACGTCGTTGAAGCTATTTCGCGGTTCTGTCGTCGGAAGAATATGGGACTTTGTGTTCTCAACGGCTCTGGGACGGTTGCGAATGTTTCTCTCCGGCAACCCTCTTCCACTCCCGGCGCTACCGTCACGTTCCACGGCCGGTTCGAGATTCTCTCCATTTCGGCCACTGTGTTTCCTCAGACGACGCCGTTTCCTCTCCCCAACGGCTTCACCATCTCCCTCGCTGGACCTCAGGGCCAAATCGTCGGCGGCTTGGTCGCCGGCGCCTTGATCGCCGCCGGTACTGTTTTCGTCGTCGCCTCGTCGTTCAACAATCCCTTGTTCCACCGGCTCTCCGATGAGGAAGAGATCAATAATTTGGCCTCCGGCGGCAGCGGCGGTGGCGAGGTTCATTCCCCACATGTCTCCGGCGGCGGAGATAGTAGCGGGCACGGGCACGGGCACGGGCAGAGTCACGGGCAGCAGCTTGTGGAATCGTGTGGAATGGCTATGTACAGTTGCCATGCGCCGTCCGATGTAATATGGGCGTCGACGGCAAGGCAGCCGCCGCCGTACTAATTCATAACTTTTCTTTTGATCTTCT

mRNA sequence

CCCTTCTTCATCCATTCCTCCCTTTCTCTCTCTTTCTTTAAATTTTTTAAAAAGAAAAGAAAAACATTACTTTAAAGAAAAAAAAAATAGAAATTTGGGGATTTTGAAGAAAAGAAATGAAAGGCGATTTCGCTCACCCCAAGAGCAAGACTTCCAATATGTTATCTAAATTCCATCTCACCCACCCGTTTACCCACCCTCCGCCGCAGCAACCCGACGACGATTCCACCGCCGCCGCCGTTCCTCCGCCCTTTAAACATCTCTCCGACCACAACTCTGCCGCGGATGGCTCCACGATTGAGTTGGTCCGACGGCCGAGGGGTCGCCCACCGGGGTCCAAGAATAAACCGAAACCGCCTCTTGTCATAACCCGGGAACCCGAACCGGCTATGCGGCCGTACGTTCTAGAAGTGCCCGGTGGAAACGACGTCGTTGAAGCTATTTCGCGGTTCTGTCGTCGGAAGAATATGGGACTTTGTGTTCTCAACGGCTCTGGGACGGTTGCGAATGTTTCTCTCCGGCAACCCTCTTCCACTCCCGGCGCTACCGTCACGTTCCACGGCCGGTTCGAGATTCTCTCCATTTCGGCCACTGTGTTTCCTCAGACGACGCCGTTTCCTCTCCCCAACGGCTTCACCATCTCCCTCGCTGGACCTCAGGGCCAAATCGTCGGCGGCTTGGTCGCCGGCGCCTTGATCGCCGCCGGTACTGTTTTCGTCGTCGCCTCGTCGTTCAACAATCCCTTGTTCCACCGGCTCTCCGATGAGGAAGAGATCAATAATTTGGCCTCCGGCGGCAGCGGCGGTGGCGAGGTTCATTCCCCACATGTCTCCGGCGGCGGAGATAGTAGCGGGCACGGGCACGGGCACGGGCAGAGTCACGGGCAGCAGCTTGTGGAATCGTGTGGAATGGCTATGTACAGTTGCCATGCGCCGTCCGATGTAATATGGGCGTCGACGGCAAGGCAGCCGCCGCCGTACTAATTCATAACTTTTCTTTTGATCTTCT

Coding sequence (CDS)

ATGAAAGGCGATTTCGCTCACCCCAAGAGCAAGACTTCCAATATGTTATCTAAATTCCATCTCACCCACCCGTTTACCCACCCTCCGCCGCAGCAACCCGACGACGATTCCACCGCCGCCGCCGTTCCTCCGCCCTTTAAACATCTCTCCGACCACAACTCTGCCGCGGATGGCTCCACGATTGAGTTGGTCCGACGGCCGAGGGGTCGCCCACCGGGGTCCAAGAATAAACCGAAACCGCCTCTTGTCATAACCCGGGAACCCGAACCGGCTATGCGGCCGTACGTTCTAGAAGTGCCCGGTGGAAACGACGTCGTTGAAGCTATTTCGCGGTTCTGTCGTCGGAAGAATATGGGACTTTGTGTTCTCAACGGCTCTGGGACGGTTGCGAATGTTTCTCTCCGGCAACCCTCTTCCACTCCCGGCGCTACCGTCACGTTCCACGGCCGGTTCGAGATTCTCTCCATTTCGGCCACTGTGTTTCCTCAGACGACGCCGTTTCCTCTCCCCAACGGCTTCACCATCTCCCTCGCTGGACCTCAGGGCCAAATCGTCGGCGGCTTGGTCGCCGGCGCCTTGATCGCCGCCGGTACTGTTTTCGTCGTCGCCTCGTCGTTCAACAATCCCTTGTTCCACCGGCTCTCCGATGAGGAAGAGATCAATAATTTGGCCTCCGGCGGCAGCGGCGGTGGCGAGGTTCATTCCCCACATGTCTCCGGCGGCGGAGATAGTAGCGGGCACGGGCACGGGCACGGGCAGAGTCACGGGCAGCAGCTTGTGGAATCGTGTGGAATGGCTATGTACAGTTGCCATGCGCCGTCCGATGTAATATGGGCGTCGACGGCAAGGCAGCCGCCGCCGTACTAA

Protein sequence

MKGDFAHPKSKTSNMLSKFHLTHPFTHPPPQQPDDDSTAAAVPPPFKHLSDHNSAADGSTIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGLCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLSDEEEINNLASGGSGGGEVHSPHVSGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPPY

Homology

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BLAST of Lcy01g012170 vs. ExPASy Swiss-Prot
Match: Q9LTA2 (AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AHL17 PE=2 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.1e-73
Identity = 164/294 (55.78%), Postives = 203/294 (69.05%), Query Frame = 0


Query: 1   MKGDFAHPKSKTSNMLSKFHLTHPFTHPPPQQPDDDSTAAAVPPPFKHLSDHNSAADGST 60
           MKG++   KS  + M SK  L H       QQ     T+      F   S      D S+
Sbjct: 1   MKGEYREQKS--NEMFSK--LPHHQQQQQQQQQQHSLTS-----HFHLSSTVTPTVDDSS 60

Query: 61  IELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGL 120
           IE+VRRPRGRPPGSKNKPKPP+ +TR+ +P M PY+LEVP GNDVVEAI+RFCRRK++G+
Sbjct: 61  IEVVRRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRKSIGV 120

Query: 121 CVLNGSGTVANVSLRQPS-STPGATVTFHGRFEILSISATVFP----QTTPFPLPNGFTI 180
           CVL+GSG+VANV+LRQPS +  G+T+TFHG+F++LS+SAT  P     +   P+ N FT+
Sbjct: 121 CVLSGSGSVANVTLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPRTSLSPPVSNFFTV 180

Query: 181 SLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLSDEEEINNLASGGSGGGEVHS 240
           SLAGPQGQI+GG VAG LI+AGTV+V+A+SFNNP +HRL  EEE  +  S G+G  E  S
Sbjct: 181 SLAGPQGQIIGGFVAGPLISAGTVYVIAASFNNPSYHRLPAEEEQKH--SAGTGEREGQS 240

Query: 241 PHVSGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCH-APSDVIWASTARQPPPY 289
           P VSGGG+ SG   G G        ESCG++MYSCH   SDVIWA TAR PPPY
Sbjct: 241 PPVSGGGEESGQMAGSGG-------ESCGVSMYSCHMGGSDVIWAPTARAPPPY 276

[Close]

BLAST of Lcy01g012170 vs. ExPASy Swiss-Prot
Match: Q9M9R4 (AT-hook motif nuclear-localized protein 28 OS=Arabidopsis thaliana OX=3702 GN=AHL28 PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.8e-53
Identity = 123/234 (52.56%), Postives = 154/234 (65.81%), Query Frame = 0


Query: 61  IELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGL 120
           +E V RPRGRP GSKNKPK P+ +T   +P M PY+LEVP GNDVVEA++RFCR K +G 
Sbjct: 1   METVGRPRGRPRGSKNKPKAPIFVT--IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGF 60

Query: 121 CVLNGSGTVANVSLRQPS-STPGATVTFHGRFEILSISATVFPQTTPF----PLPNGFTI 180
           CVL+GSG+VA+V+LRQPS + PG+T+TFHG+F++LS+SAT  P   P     P+ N FT+
Sbjct: 61  CVLSGSGSVADVTLRQPSPAAPGSTITFHGKFDLLSVSATFLPPLPPTSLSPPVSNFFTV 120

Query: 181 SLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRL-SDEEEINNLASGGSGGGEVH 240
           SLAGPQG+++GG VAG L+AAGTV+ VA+SF NP +HRL + EEE  N A G   G    
Sbjct: 121 SLAGPQGKVIGGFVAGPLVAAGTVYFVATSFKNPSYHRLPATEEEQRNSAEGEEEG---Q 180

Query: 241 SPHVSGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPPY 289
           SP VSGGG  S +  G                       SDVIW   A+ P PY
Sbjct: 181 SPPVSGGGGESMYVGG-----------------------SDVIWDPNAKAPSPY 206

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BLAST of Lcy01g012170 vs. ExPASy Swiss-Prot
Match: O49662 (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 7.1e-44
Identity = 92/194 (47.42%), Postives = 130/194 (67.01%), Query Frame = 0


Query: 50  SDHNSAADGSTIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAI 109
           S       G   ++ RRPRGRP GSKNKPKPP++ITR+   A+R +V+E+  G D+VE++
Sbjct: 90  SGEGGGGSGGDHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESV 149

Query: 110 SRFCRRKNMGLCVLNGSGTVANVSLRQPSS--TPGATVTFHGRFEILSISATVFPQTTPF 169
           + F RR+  G+CV++G+G V NV++RQP S  +PG+ V+ HGRFEILS+S +  P   P 
Sbjct: 150 ATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAP- 209

Query: 170 PLPNGFTISLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLS-DEEEINNLASG 229
           P   G ++ LAG QGQ+VGG V G L+ AG V V+A+SF+N  + RL  +E+E+     G
Sbjct: 210 PTATGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQTPVHG 269

Query: 230 GSGGGEVHSPHVSG 241
           G GGG + SP + G
Sbjct: 270 GGGGGSLESPPMMG 282

[Close]

BLAST of Lcy01g012170 vs. ExPASy Swiss-Prot
Match: O82166 (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.8e-42
Identity = 98/186 (52.69%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 58  GSTIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKN 117
           GS   ++RRPRGRP GSKNKPKPP+++TRE    +R ++LEV  G DV E IS + RR+ 
Sbjct: 71  GSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQ 130

Query: 118 MGLCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISL 177
            G+CVL+G+GTV NVS+RQP++  GA VT  G FEILS+S +  P   P P     TI L
Sbjct: 131 RGICVLSGTGTVTNVSIRQPTAA-GAVVTLRGTFEILSLSGSFLPPPAP-PGATSLTIFL 190

Query: 178 AGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLS-DEEEINNLASGGSGGGEVHSP 237
           AG QGQ+VGG V G L+AAG V V+A+SF N  + RL  DE E +  + GG GGG ++S 
Sbjct: 191 AGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQSGGGGGGGNMYSE 250

Query: 238 HVSGGG 243
              GGG
Sbjct: 251 ATGGGG 254

[Close]

BLAST of Lcy01g012170 vs. ExPASy Swiss-Prot
Match: O23620 (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.5e-41
Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 65  RRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGLCVLN 124
           RRPRGRPPGSKNKPKPP++ITRE    +R ++LEV  G DV + ++ + RR+  G+CVL+
Sbjct: 82  RRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLS 141

Query: 125 GSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLAGPQGQI 184
           GSGTV NVS+RQPS+  GA VT  G FEILS+S +  P   P P     TI LAG QGQ+
Sbjct: 142 GSGTVTNVSIRQPSAA-GAVVTLQGTFEILSLSGSFLPPPAP-PGATSLTIFLAGGQGQV 201

Query: 185 VGGLVAGALIAAGTVFVVASSFNNPLFHR--LSDEEEINNLASGGSGGGEVHSPHVSGGG 243
           VGG V G L AAG V V+A+SF N  + R  L ++E+   L  G +GGG +     +GGG
Sbjct: 202 VGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQLGGGSNGGGNLFPEVAAGGG 259

[Close]

BLAST of Lcy01g012170 vs. ExPASy TrEMBL
Match: A0A5A7VDF8 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004190 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135
Identity = 253/289 (87.54%), Postives = 264/289 (91.35%), Query Frame = 0


Query: 1   MKGDFAHPKSKTSNMLSKFHLT-HPFTHPPPQQPDDDSTAAAVPPPFKHLSDHNSAADGS 60
           MKGDFAHPKSKTSNMLSKFHL+ HPFTH PP QP  D  AAA+P PFKH  D  S ADGS
Sbjct: 1   MKGDFAHPKSKTSNMLSKFHLSPHPFTHHPPPQPPADEPAAAMPSPFKHHPDLTSTADGS 60

Query: 61  TIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMG 120
           TIE+VRRPRGRPPGSKNKPKPPLV+TREPEPAMRPYVLEVPGGNDVVEAISRF RRKN+G
Sbjct: 61  TIEVVRRPRGRPPGSKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLG 120

Query: 121 LCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLAG 180
           LCVLNGSGTVANVSLRQPS+TPGATVTFHGRFEILSISATVFPQ+TP P+PNGFTISLAG
Sbjct: 121 LCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQSTPLPIPNGFTISLAG 180

Query: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLSDEEEINNLAS-GGSGGGEVHSPHV 240
           PQGQIVGGLVAGALIAAGTVFVVASSFNNPL+HRL DEEEI NL S GGSGGGEVHSPHV
Sbjct: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPLYHRLPDEEEIKNLGSGGGSGGGEVHSPHV 240

Query: 241 SGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPP 288
           SGGGDSSG GHGHG  HG Q+ E+CGMAMYSCHAPSDVIWA TARQPPP
Sbjct: 241 SGGGDSSGQGHGHG--HG-QIAETCGMAMYSCHAPSDVIWAPTARQPPP 286

[Close]

BLAST of Lcy01g012170 vs. ExPASy TrEMBL
Match: A0A1S3BBI9 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103488132 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135
Identity = 253/289 (87.54%), Postives = 264/289 (91.35%), Query Frame = 0


Query: 1   MKGDFAHPKSKTSNMLSKFHLT-HPFTHPPPQQPDDDSTAAAVPPPFKHLSDHNSAADGS 60
           MKGDFAHPKSKTSNMLSKFHL+ HPFTH PP QP  D  AAA+P PFKH  D  S ADGS
Sbjct: 1   MKGDFAHPKSKTSNMLSKFHLSPHPFTHHPPPQPPADEPAAAMPSPFKHHPDLTSTADGS 60

Query: 61  TIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMG 120
           TIE+VRRPRGRPPGSKNKPKPPLV+TREPEPAMRPYVLEVPGGNDVVEAISRF RRKN+G
Sbjct: 61  TIEVVRRPRGRPPGSKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLG 120

Query: 121 LCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLAG 180
           LCVLNGSGTVANVSLRQPS+TPGATVTFHGRFEILSISATVFPQ+TP P+PNGFTISLAG
Sbjct: 121 LCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQSTPLPIPNGFTISLAG 180

Query: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLSDEEEINNLAS-GGSGGGEVHSPHV 240
           PQGQIVGGLVAGALIAAGTVFVVASSFNNPL+HRL DEEEI NL S GGSGGGEVHSPHV
Sbjct: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPLYHRLPDEEEIKNLGSGGGSGGGEVHSPHV 240

Query: 241 SGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPP 288
           SGGGDSSG GHGHG  HG Q+ E+CGMAMYSCHAPSDVIWA TARQPPP
Sbjct: 241 SGGGDSSGQGHGHG--HG-QIAETCGMAMYSCHAPSDVIWAPTARQPPP 286

[Close]

BLAST of Lcy01g012170 vs. ExPASy TrEMBL
Match: A0A0A0LLT8 (PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370580 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 7.7e-134
Identity = 249/289 (86.16%), Postives = 261/289 (90.31%), Query Frame = 0


Query: 1   MKGDFAHPKSKTSNMLSKFHLT-HPFTHPPPQQPDDDSTAAAVPPPFKHLSDHNSAADGS 60
           MKGDFAHPKSKTSNMLSKFHL+ HPFTH PP QP  D   AA+P PFKH +D  S ADGS
Sbjct: 1   MKGDFAHPKSKTSNMLSKFHLSPHPFTHHPPPQPPVDEPIAALPSPFKHHTDLTSTADGS 60

Query: 61  TIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMG 120
           TIE+VRRPRGRPPGSKNKPKPPLV+TREPEPAMRPYVLEVPGGNDVVEAISRF RRKN+G
Sbjct: 61  TIEVVRRPRGRPPGSKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLG 120

Query: 121 LCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLAG 180
           LCVLNGSGTVANVSLRQPS+TPGATVTFHGRFEILSISATVFPQ+TP PLPNGF+ISLAG
Sbjct: 121 LCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQSTPLPLPNGFSISLAG 180

Query: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLSDEEEINNLAS-GGSGGGEVHSPHV 240
           PQGQIVGGLVAGALIAAGTVFVVASSFNNP +HRL DEEEI NL S GGSGGGEVHSPHV
Sbjct: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPFYHRLPDEEEIKNLGSGGGSGGGEVHSPHV 240

Query: 241 SGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPP 288
           SGGGDSSG GHGHG     Q+ E+CGMAMYSCHAPSDVIWA TARQPPP
Sbjct: 241 SGGGDSSGQGHGHG-----QIAETCGMAMYSCHAPSDVIWAPTARQPPP 284

[Close]

BLAST of Lcy01g012170 vs. ExPASy TrEMBL
Match: A0A6J1GJ97 (AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC111454367 PE=4 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 1.3e-112
Identity = 217/253 (85.77%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 36  DSTAAAVPPPFKHLSDHNSA-ADGSTIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRP 95
           DSTA  V P FKH SD +SA  DGSTIE+VRRPRGRPPGSKNKPKPPL ITRE + AMRP
Sbjct: 4   DSTATGVHPLFKHFSDPSSALTDGSTIEVVRRPRGRPPGSKNKPKPPLFITRENDSAMRP 63

Query: 96  YVLEVPGGNDVVEAISRFCRRKNMGLCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEIL 155
           YVLEVPGGNDVVEAISRFC RKNMGLCVLNGSGTVANVSLRQPS+TPGA VTFHGRFEIL
Sbjct: 64  YVLEVPGGNDVVEAISRFCCRKNMGLCVLNGSGTVANVSLRQPSATPGAAVTFHGRFEIL 123

Query: 156 SISATVFPQTTPFPLPNGFTISLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRL 215
           SISATVFPQTT FPLPNGFTISLAGPQGQIVGGLVAGALI+AGTVFVVASSFNNP +HRL
Sbjct: 124 SISATVFPQTTAFPLPNGFTISLAGPQGQIVGGLVAGALISAGTVFVVASSFNNPSYHRL 183

Query: 216 SDEEEINNLASGGSGGGEVHSPHVSGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPS 275
            DE EI NL SGGS  GE HSPHVSGGGDSSGHGHG    HGQ L+ESCG+AMYSCHAPS
Sbjct: 184 PDENEIQNLGSGGS--GEAHSPHVSGGGDSSGHGHG----HGQPLLESCGVAMYSCHAPS 243

Query: 276 DVIWASTARQPPP 288
           DVIWA TARQPPP
Sbjct: 244 DVIWAPTARQPPP 250

[Close]

BLAST of Lcy01g012170 vs. ExPASy TrEMBL
Match: A0A6J1KKK9 (AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111496119 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 4.6e-110
Identity = 214/254 (84.25%), Postives = 223/254 (87.80%), Query Frame = 0


Query: 36  DSTAAAVPPPFKHLSDHNSA-ADGSTIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRP 95
           DSTA  V P FKH S+ +SA  DGSTIE+VRRPRGRPPGSKNK KPPLVITRE + AMRP
Sbjct: 4   DSTATGVHPLFKHFSNPSSAVTDGSTIEVVRRPRGRPPGSKNKLKPPLVITRENDSAMRP 63

Query: 96  YVLEVPGGNDVVEAISRFCRRKNMGLCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEIL 155
           YVLEVPGGNDVVEAISRFC RKNMGLCVLNGSGTVANVSLRQPS+T GA VTFHGRFEIL
Sbjct: 64  YVLEVPGGNDVVEAISRFCCRKNMGLCVLNGSGTVANVSLRQPSATAGAAVTFHGRFEIL 123

Query: 156 SISATVFPQTTPFPLPNGFTISLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRL 215
           SISATVFPQTT FPLPNGFTISLAGPQGQIVGGLVAGALI+AGTVFVVASSFNNPL+HRL
Sbjct: 124 SISATVFPQTTAFPLPNGFTISLAGPQGQIVGGLVAGALISAGTVFVVASSFNNPLYHRL 183

Query: 216 SDEEEINNLASGGSGGGEVHSPHVSGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPS 275
            DE EI NL SGGS  GE HSPHVSGGGDSSGHG      HGQ L+ESCG+AMYSCH PS
Sbjct: 184 PDENEIQNLGSGGS--GEAHSPHVSGGGDSSGHG------HGQPLLESCGVAMYSCHTPS 243

Query: 276 DVIWASTARQPPPY 289
           DVIWA TARQPPPY
Sbjct: 244 DVIWAPTARQPPPY 249

[Close]

BLAST of Lcy01g012170 vs. NCBI nr
Match: XP_038885455.1 (AT-hook motif nuclear-localized protein 17-like [Benincasa hispida])

HSP 1 Score: 498.4 bits (1282), Expect = 4.0e-137
Identity = 260/290 (89.66%), Postives = 270/290 (93.10%), Query Frame = 0


Query: 1   MKGDFAHPKSKTSNMLSKFHL-THPFT-HPPPQQPDDDSTAAAVPPPFKHLSDHNSAADG 60
           MKGDFAHPKSKTSNMLSKFHL THPF+ HPPPQQP D+ T AAVP  FKH ++  S ADG
Sbjct: 1   MKGDFAHPKSKTSNMLSKFHLSTHPFSNHPPPQQPADEPT-AAVPSAFKHHTELTSTADG 60

Query: 61  STIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNM 120
           STIE+VRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKN+
Sbjct: 61  STIEVVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNL 120

Query: 121 GLCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLA 180
           GLCVLNGSGTVANVSLRQPS+TPGATVTFHGRFEILSISATVFPQTTP PLPNGFTISLA
Sbjct: 121 GLCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQTTPLPLPNGFTISLA 180

Query: 181 GPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLSDEEEINNLAS-GGSGGGEVHSPH 240
           GPQGQIVGGLVAGALI+AGTVF+VASSFNNPL+HRL DEEEI NL S GGSGGGEVHSPH
Sbjct: 181 GPQGQIVGGLVAGALISAGTVFIVASSFNNPLYHRLPDEEEIKNLGSGGGSGGGEVHSPH 240

Query: 241 VSGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPP 288
           VSGGGDSSGHGHGHG  HG QLVESCGMAMYSCHAPSDVIWA TARQPPP
Sbjct: 241 VSGGGDSSGHGHGHG--HG-QLVESCGMAMYSCHAPSDVIWAPTARQPPP 286

[Close]

BLAST of Lcy01g012170 vs. NCBI nr
Match: XP_008444938.1 (PREDICTED: AT-hook motif nuclear-localized protein 17-like [Cucumis melo] >KAA0065087.1 AT-hook motif nuclear-localized protein 17-like [Cucumis melo var. makuwa])

HSP 1 Score: 491.5 bits (1264), Expect = 5.0e-135
Identity = 253/289 (87.54%), Postives = 264/289 (91.35%), Query Frame = 0


Query: 1   MKGDFAHPKSKTSNMLSKFHLT-HPFTHPPPQQPDDDSTAAAVPPPFKHLSDHNSAADGS 60
           MKGDFAHPKSKTSNMLSKFHL+ HPFTH PP QP  D  AAA+P PFKH  D  S ADGS
Sbjct: 1   MKGDFAHPKSKTSNMLSKFHLSPHPFTHHPPPQPPADEPAAAMPSPFKHHPDLTSTADGS 60

Query: 61  TIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMG 120
           TIE+VRRPRGRPPGSKNKPKPPLV+TREPEPAMRPYVLEVPGGNDVVEAISRF RRKN+G
Sbjct: 61  TIEVVRRPRGRPPGSKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLG 120

Query: 121 LCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLAG 180
           LCVLNGSGTVANVSLRQPS+TPGATVTFHGRFEILSISATVFPQ+TP P+PNGFTISLAG
Sbjct: 121 LCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQSTPLPIPNGFTISLAG 180

Query: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLSDEEEINNLAS-GGSGGGEVHSPHV 240
           PQGQIVGGLVAGALIAAGTVFVVASSFNNPL+HRL DEEEI NL S GGSGGGEVHSPHV
Sbjct: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPLYHRLPDEEEIKNLGSGGGSGGGEVHSPHV 240

Query: 241 SGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPP 288
           SGGGDSSG GHGHG  HG Q+ E+CGMAMYSCHAPSDVIWA TARQPPP
Sbjct: 241 SGGGDSSGQGHGHG--HG-QIAETCGMAMYSCHAPSDVIWAPTARQPPP 286

[Close]

BLAST of Lcy01g012170 vs. NCBI nr
Match: XP_004148420.1 (AT-hook motif nuclear-localized protein 17 [Cucumis sativus])

HSP 1 Score: 486.5 bits (1251), Expect = 1.6e-133
Identity = 249/289 (86.16%), Postives = 261/289 (90.31%), Query Frame = 0


Query: 1   MKGDFAHPKSKTSNMLSKFHLT-HPFTHPPPQQPDDDSTAAAVPPPFKHLSDHNSAADGS 60
           MKGDFAHPKSKTSNMLSKFHL+ HPFTH PP QP  D   AA+P PFKH +D  S ADGS
Sbjct: 1   MKGDFAHPKSKTSNMLSKFHLSPHPFTHHPPPQPPVDEPIAALPSPFKHHTDLTSTADGS 60

Query: 61  TIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMG 120
           TIE+VRRPRGRPPGSKNKPKPPLV+TREPEPAMRPYVLEVPGGNDVVEAISRF RRKN+G
Sbjct: 61  TIEVVRRPRGRPPGSKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLG 120

Query: 121 LCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLAG 180
           LCVLNGSGTVANVSLRQPS+TPGATVTFHGRFEILSISATVFPQ+TP PLPNGF+ISLAG
Sbjct: 121 LCVLNGSGTVANVSLRQPSATPGATVTFHGRFEILSISATVFPQSTPLPLPNGFSISLAG 180

Query: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLSDEEEINNLAS-GGSGGGEVHSPHV 240
           PQGQIVGGLVAGALIAAGTVFVVASSFNNP +HRL DEEEI NL S GGSGGGEVHSPHV
Sbjct: 181 PQGQIVGGLVAGALIAAGTVFVVASSFNNPFYHRLPDEEEIKNLGSGGGSGGGEVHSPHV 240

Query: 241 SGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPP 288
           SGGGDSSG GHGHG     Q+ E+CGMAMYSCHAPSDVIWA TARQPPP
Sbjct: 241 SGGGDSSGQGHGHG-----QIAETCGMAMYSCHAPSDVIWAPTARQPPP 284

[Close]

BLAST of Lcy01g012170 vs. NCBI nr
Match: KAE8652143.1 (hypothetical protein Csa_022476 [Cucumis sativus])

HSP 1 Score: 457.6 bits (1176), Expect = 7.9e-125
Identity = 235/275 (85.45%), Postives = 247/275 (89.82%), Query Frame = 0


Query: 15  MLSKFHLT-HPFTHPPPQQPDDDSTAAAVPPPFKHLSDHNSAADGSTIELVRRPRGRPPG 74
           MLSKFHL+ HPFTH PP QP  D   AA+P PFKH +D  S ADGSTIE+VRRPRGRPPG
Sbjct: 1   MLSKFHLSPHPFTHHPPPQPPVDEPIAALPSPFKHHTDLTSTADGSTIEVVRRPRGRPPG 60

Query: 75  SKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGLCVLNGSGTVANVS 134
           SKNKPKPPLV+TREPEPAMRPYVLEVPGGNDVVEAISRF RRKN+GLCVLNGSGTVANVS
Sbjct: 61  SKNKPKPPLVVTREPEPAMRPYVLEVPGGNDVVEAISRFSRRKNLGLCVLNGSGTVANVS 120

Query: 135 LRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLAGPQGQIVGGLVAGAL 194
           LRQPS+TPGATVTFHGRFEILSISATVFPQ+TP PLPNGF+ISLAGPQGQIVGGLVAGAL
Sbjct: 121 LRQPSATPGATVTFHGRFEILSISATVFPQSTPLPLPNGFSISLAGPQGQIVGGLVAGAL 180

Query: 195 IAAGTVFVVASSFNNPLFHRLSDEEEINNLAS-GGSGGGEVHSPHVSGGGDSSGHGHGHG 254
           IAAGTVFVVASSFNNP +HRL DEEEI NL S GGSGGGEVHSPHVSGGGDSSG GHGHG
Sbjct: 181 IAAGTVFVVASSFNNPFYHRLPDEEEIKNLGSGGGSGGGEVHSPHVSGGGDSSGQGHGHG 240

Query: 255 QSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPP 288
                Q+ E+CGMAMYSCHAPSDVIWA TARQPPP
Sbjct: 241 -----QIAETCGMAMYSCHAPSDVIWAPTARQPPP 270

[Close]

BLAST of Lcy01g012170 vs. NCBI nr
Match: XP_022951604.1 (AT-hook motif nuclear-localized protein 17-like [Cucurbita moschata])

HSP 1 Score: 416.0 bits (1068), Expect = 2.6e-112
Identity = 217/253 (85.77%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 36  DSTAAAVPPPFKHLSDHNSA-ADGSTIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRP 95
           DSTA  V P FKH SD +SA  DGSTIE+VRRPRGRPPGSKNKPKPPL ITRE + AMRP
Sbjct: 4   DSTATGVHPLFKHFSDPSSALTDGSTIEVVRRPRGRPPGSKNKPKPPLFITRENDSAMRP 63

Query: 96  YVLEVPGGNDVVEAISRFCRRKNMGLCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEIL 155
           YVLEVPGGNDVVEAISRFC RKNMGLCVLNGSGTVANVSLRQPS+TPGA VTFHGRFEIL
Sbjct: 64  YVLEVPGGNDVVEAISRFCCRKNMGLCVLNGSGTVANVSLRQPSATPGAAVTFHGRFEIL 123

Query: 156 SISATVFPQTTPFPLPNGFTISLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRL 215
           SISATVFPQTT FPLPNGFTISLAGPQGQIVGGLVAGALI+AGTVFVVASSFNNP +HRL
Sbjct: 124 SISATVFPQTTAFPLPNGFTISLAGPQGQIVGGLVAGALISAGTVFVVASSFNNPSYHRL 183

Query: 216 SDEEEINNLASGGSGGGEVHSPHVSGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPS 275
            DE EI NL SGGS  GE HSPHVSGGGDSSGHGHG    HGQ L+ESCG+AMYSCHAPS
Sbjct: 184 PDENEIQNLGSGGS--GEAHSPHVSGGGDSSGHGHG----HGQPLLESCGVAMYSCHAPS 243

Query: 276 DVIWASTARQPPP 288
           DVIWA TARQPPP
Sbjct: 244 DVIWAPTARQPPP 250

[Close]

BLAST of Lcy01g012170 vs. TAIR 10
Match: AT5G49700.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 278.1 bits (710), Expect = 8.0e-75
Identity = 164/294 (55.78%), Postives = 203/294 (69.05%), Query Frame = 0


Query: 1   MKGDFAHPKSKTSNMLSKFHLTHPFTHPPPQQPDDDSTAAAVPPPFKHLSDHNSAADGST 60
           MKG++   KS  + M SK  L H       QQ     T+      F   S      D S+
Sbjct: 1   MKGEYREQKS--NEMFSK--LPHHQQQQQQQQQQHSLTS-----HFHLSSTVTPTVDDSS 60

Query: 61  IELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGL 120
           IE+VRRPRGRPPGSKNKPKPP+ +TR+ +P M PY+LEVP GNDVVEAI+RFCRRK++G+
Sbjct: 61  IEVVRRPRGRPPGSKNKPKPPVFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRKSIGV 120

Query: 121 CVLNGSGTVANVSLRQPS-STPGATVTFHGRFEILSISATVFP----QTTPFPLPNGFTI 180
           CVL+GSG+VANV+LRQPS +  G+T+TFHG+F++LS+SAT  P     +   P+ N FT+
Sbjct: 121 CVLSGSGSVANVTLRQPSPAALGSTITFHGKFDLLSVSATFLPPPPRTSLSPPVSNFFTV 180

Query: 181 SLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLSDEEEINNLASGGSGGGEVHS 240
           SLAGPQGQI+GG VAG LI+AGTV+V+A+SFNNP +HRL  EEE  +  S G+G  E  S
Sbjct: 181 SLAGPQGQIIGGFVAGPLISAGTVYVIAASFNNPSYHRLPAEEEQKH--SAGTGEREGQS 240

Query: 241 PHVSGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCH-APSDVIWASTARQPPPY 289
           P VSGGG+ SG   G G        ESCG++MYSCH   SDVIWA TAR PPPY
Sbjct: 241 PPVSGGGEESGQMAGSGG-------ESCGVSMYSCHMGGSDVIWAPTARAPPPY 276

[Close]

BLAST of Lcy01g012170 vs. TAIR 10
Match: AT1G14490.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-54
Identity = 123/234 (52.56%), Postives = 154/234 (65.81%), Query Frame = 0


Query: 61  IELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGL 120
           +E V RPRGRP GSKNKPK P+ +T   +P M PY+LEVP GNDVVEA++RFCR K +G 
Sbjct: 1   METVGRPRGRPRGSKNKPKAPIFVT--IDPPMSPYILEVPSGNDVVEALNRFCRGKAIGF 60

Query: 121 CVLNGSGTVANVSLRQPS-STPGATVTFHGRFEILSISATVFPQTTPF----PLPNGFTI 180
           CVL+GSG+VA+V+LRQPS + PG+T+TFHG+F++LS+SAT  P   P     P+ N FT+
Sbjct: 61  CVLSGSGSVADVTLRQPSPAAPGSTITFHGKFDLLSVSATFLPPLPPTSLSPPVSNFFTV 120

Query: 181 SLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRL-SDEEEINNLASGGSGGGEVH 240
           SLAGPQG+++GG VAG L+AAGTV+ VA+SF NP +HRL + EEE  N A G   G    
Sbjct: 121 SLAGPQGKVIGGFVAGPLVAAGTVYFVATSFKNPSYHRLPATEEEQRNSAEGEEEG---Q 180

Query: 241 SPHVSGGGDSSGHGHGHGQSHGQQLVESCGMAMYSCHAPSDVIWASTARQPPPY 289
           SP VSGGG  S +  G                       SDVIW   A+ P PY
Sbjct: 181 SPPVSGGGGESMYVGG-----------------------SDVIWDPNAKAPSPY 206

[Close]

BLAST of Lcy01g012170 vs. TAIR 10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 179.1 bits (453), Expect = 5.1e-45
Identity = 92/194 (47.42%), Postives = 130/194 (67.01%), Query Frame = 0


Query: 50  SDHNSAADGSTIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAI 109
           S       G   ++ RRPRGRP GSKNKPKPP++ITR+   A+R +V+E+  G D+VE++
Sbjct: 90  SGEGGGGSGGDHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESV 149

Query: 110 SRFCRRKNMGLCVLNGSGTVANVSLRQPSS--TPGATVTFHGRFEILSISATVFPQTTPF 169
           + F RR+  G+CV++G+G V NV++RQP S  +PG+ V+ HGRFEILS+S +  P   P 
Sbjct: 150 ATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAP- 209

Query: 170 PLPNGFTISLAGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLS-DEEEINNLASG 229
           P   G ++ LAG QGQ+VGG V G L+ AG V V+A+SF+N  + RL  +E+E+     G
Sbjct: 210 PTATGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLEEDEMQTPVHG 269

Query: 230 GSGGGEVHSPHVSG 241
           G GGG + SP + G
Sbjct: 270 GGGGGSLESPPMMG 282

[Close]

BLAST of Lcy01g012170 vs. TAIR 10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-43
Identity = 98/186 (52.69%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 58  GSTIELVRRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKN 117
           GS   ++RRPRGRP GSKNKPKPP+++TRE    +R ++LEV  G DV E IS + RR+ 
Sbjct: 71  GSGDLVMRRPRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQ 130

Query: 118 MGLCVLNGSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISL 177
            G+CVL+G+GTV NVS+RQP++  GA VT  G FEILS+S +  P   P P     TI L
Sbjct: 131 RGICVLSGTGTVTNVSIRQPTAA-GAVVTLRGTFEILSLSGSFLPPPAP-PGATSLTIFL 190

Query: 178 AGPQGQIVGGLVAGALIAAGTVFVVASSFNNPLFHRLS-DEEEINNLASGGSGGGEVHSP 237
           AG QGQ+VGG V G L+AAG V V+A+SF N  + RL  DE E +  + GG GGG ++S 
Sbjct: 191 AGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEEHLQSGGGGGGGNMYSE 250

Query: 238 HVSGGG 243
              GGG
Sbjct: 251 ATGGGG 254

[Close]

BLAST of Lcy01g012170 vs. TAIR 10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein )

HSP 1 Score: 171.4 bits (433), Expect = 1.1e-42
Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 65  RRPRGRPPGSKNKPKPPLVITREPEPAMRPYVLEVPGGNDVVEAISRFCRRKNMGLCVLN 124
           RRPRGRPPGSKNKPKPP++ITRE    +R ++LEV  G DV + ++ + RR+  G+CVL+
Sbjct: 82  RRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLS 141

Query: 125 GSGTVANVSLRQPSSTPGATVTFHGRFEILSISATVFPQTTPFPLPNGFTISLAGPQGQI 184
           GSGTV NVS+RQPS+  GA VT  G FEILS+S +  P   P P     TI LAG QGQ+
Sbjct: 142 GSGTVTNVSIRQPSAA-GAVVTLQGTFEILSLSGSFLPPPAP-PGATSLTIFLAGGQGQV 201

Query: 185 VGGLVAGALIAAGTVFVVASSFNNPLFHR--LSDEEEINNLASGGSGGGEVHSPHVSGGG 243
           VGG V G L AAG V V+A+SF N  + R  L ++E+   L  G +GGG +     +GGG
Sbjct: 202 VGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQQQQLGGGSNGGGNLFPEVAAGGG 259

The following BLAST results are available for this feature:

BLAST of Lcy01g012170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTA2	1.1e-73	55.78	AT-hook motif nuclear-localized protein 17 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
Q9M9R4	3.8e-53	52.56	AT-hook motif nuclear-localized protein 28 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O49662	7.1e-44	47.42	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O82166	1.8e-42	52.69	AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]
O23620	1.5e-41	52.22	AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH...	[more]

BLAST of Lcy01g012170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VDF8	2.4e-135	87.54	AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BBI9	2.4e-135	87.54	AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103488132 ...	[more]
A0A0A0LLT8	7.7e-134	86.16	PPC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370580 PE=4 SV...	[more]
A0A6J1GJ97	1.3e-112	85.77	AT-hook motif nuclear-localized protein OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KKK9	4.6e-110	84.25	AT-hook motif nuclear-localized protein OS=Cucurbita maxima OX=3661 GN=LOC111496...	[more]

BLAST of Lcy01g012170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885455.1	4.0e-137	89.66	AT-hook motif nuclear-localized protein 17-like [Benincasa hispida]	[more]
XP_008444938.1	5.0e-135	87.54	PREDICTED: AT-hook motif nuclear-localized protein 17-like [Cucumis melo] >KAA00...	[more]
XP_004148420.1	1.6e-133	86.16	AT-hook motif nuclear-localized protein 17 [Cucumis sativus]	[more]
KAE8652143.1	7.9e-125	85.45	hypothetical protein Csa_022476 [Cucumis sativus]	[more]
XP_022951604.1	2.6e-112	85.77	AT-hook motif nuclear-localized protein 17-like [Cucurbita moschata]	[more]

BLAST of Lcy01g012170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49700.1	8.0e-75	55.78	Predicted AT-hook DNA-binding family protein	[more]
AT1G14490.1	2.7e-54	52.56	Predicted AT-hook DNA-binding family protein	[more]
AT4G22810.1	5.1e-45	47.42	Predicted AT-hook DNA-binding family protein	[more]
AT2G35270.1	1.2e-43	52.69	Predicted AT-hook DNA-binding family protein	[more]
AT4G17800.1	1.1e-42	52.22	Predicted AT-hook DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014476	AT-hook motif nuclear-localized protein 15-29	PIRSF	PIRSF016021	ESCAROLA	coord: 7..288 e-value: 3.7E-83 score: 277.1
IPR014476	AT-hook motif nuclear-localized protein 15-29	PANTHER	PTHR31100	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15	coord: 45..287
None	No IPR available	GENE3D	3.30.1330.80		coord: 92..225 e-value: 2.2E-25 score: 90.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..257
None	No IPR available	PANTHER	PTHR31100:SF69	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED	coord: 45..287
None	No IPR available	SUPERFAMILY	117856	AF0104/ALDC/Ptd012-like	coord: 91..218
IPR005175	PPC domain	PFAM	PF03479	PCC	coord: 93..208 e-value: 3.2E-27 score: 95.1
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 89..227 score: 37.324383
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 93..206 e-value: 6.91007E-32 score: 112.294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g012170.1	Lcy01g012170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003680	minor groove of adenine-thymine-rich DNA binding