Homology
BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 890.2 bits (2299), Expect = 1.3e-257
Identity = 450/618 (72.82%), Postives = 514/618 (83.17%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHR-HSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPS 60
MD+ + +GFCL+ + H RG K+ R S +S ++ +G + ++R
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISS-KIPLGSRKRNR------ 60
Query: 61 DNSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGE--KNLHTHLNGSNSSSSASNHSQS 120
L +V A S+V++ NGR Q E + +++ NG N S+ N S +
Sbjct: 61 -------------LVLVSAASKVESSGLNGRAQKFETLSSGYSNSNG-NGHYSSVNSSFA 120
Query: 121 FEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRV 180
E+ E+NNHLR++VR GELEEGFKFLE+MVY G++PDII CT+LIRG C+ GKTRKA ++
Sbjct: 121 LEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 180
Query: 181 MEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGK 240
+EILE SGAVPDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCDSGK
Sbjct: 181 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 240
Query: 241 LKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 300
LKQAMEVLDR LQR+CYPDVITYTILIEATC++SGVG AMKLLDEMRD+GC PDVVTYNV
Sbjct: 241 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 300
Query: 301 LINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKG 360
L+NGICKEGRLDEAIKFLN MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG
Sbjct: 301 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 360
Query: 361 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI 420
SPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAI
Sbjct: 361 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 420
Query: 421 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 480
EYL+ MVSRGCYPDIVTYNT+LTALCKDGKV+ AVEILNQLSSKGCSPVLITYNTVIDGL
Sbjct: 421 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 480
Query: 481 SKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNA 540
+K GKT AIKLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+RPNA
Sbjct: 481 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 540
Query: 541 ITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNE 600
+T+NSIMLGLCK RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALELLNE
Sbjct: 541 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 597
Query: 601 LCSRGVVKKSSAEQVVVK 616
LC++G++KKSSAEQV K
Sbjct: 601 LCNKGLMKKSSAEQVAGK 597
BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 450.7 bits (1158), Expect = 2.7e-125
Identity = 240/566 (42.40%), Postives = 345/566 (60.95%), Query Frame = 0
Query: 62 SEEPISSINKQLSIVRAVSRVDTFSS------NGR--LQHGEKNLH--THLNGSNSSSSA 121
+++P S+ + L + S + TFS+ NGR G +NL T + + +
Sbjct: 19 TQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERR 78
Query: 122 SNHSQS--FEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTG 181
HSQS F + + R R+G E LE MV +G PD+I CT LI+G
Sbjct: 79 QQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR 138
Query: 182 KTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYN 241
KA RVMEILE G PDV YN LI+G+CK I A ++LDRM SPD VTYN
Sbjct: 139 NIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 198
Query: 242 TILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK 301
++ +LC GKL A++VL++ L C P VITYTILIEAT E GV +A+KL+DEM +
Sbjct: 199 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 258
Query: 302 GCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDA 361
G KPD+ TYN +I G+CKEG +D A + + ++ GC+P+VI++NI+LR++ + G+W +
Sbjct: 259 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 318
Query: 362 EKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHG 421
EKL+ +M + C P+VVT++ILI LCR G + A+++L+ M + G TP++ SY+PL+
Sbjct: 319 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 378
Query: 422 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 481
FC+E ++D AIE+L+ M+S GC PDIV YNT+L LCK+GK D A+EI +L GCSP
Sbjct: 379 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 438
Query: 482 LITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFH 541
+YNT+ L G A+ ++ EM G+ PD ITY+S++ L REG VDEA
Sbjct: 439 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 498
Query: 542 DLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEG 601
D+ P+ +TYN ++LG CK + AI+ L MV GC+P E +Y +LIEG+ + G
Sbjct: 499 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 558
Query: 602 LAKEALELLNELCSRGVVKKSSAEQV 613
EA+EL N+L + + S +++
Sbjct: 559 YRAEAMELANDLVRIDAISEYSFKRL 583
BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match:
A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)
HSP 1 Score: 350.9 bits (899), Expect = 2.9e-95
Identity = 188/486 (38.68%), Postives = 291/486 (59.88%), Query Frame = 0
Query: 136 LEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 195
L + F LE +V G P++ T L+ LCK + +KA RV+E++ SG +PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 196 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 255
L++ CK G +G A+QL+++M + VTYN ++R LC G L Q+++ ++R +Q+
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 256 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 315
P+ TY+ L+EA KE G +A+KLLDE+ KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 316 KFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 375
+P+ G + NV+++NI+LR +C GRW +A LLAEM +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 376 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 435
G +A+ VL++M + H + SYNP++ CKE K+D ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 436 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 495
+ TYN + + + KV A I+ LS+K Y +VI L + G T A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 496 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYNSIMLGLCK 555
EM G PD TYS+L+ GL EG A+ +EE +P +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 556 VRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 615
+R+T A++ MV + P E +Y IL+EG+A+E + A E+L+EL R V+ +++
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match:
Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)
HSP 1 Score: 345.5 bits (885), Expect = 1.2e-93
Identity = 183/483 (37.89%), Postives = 274/483 (56.73%), Query Frame = 0
Query: 119 EEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVM 178
+E NN L L NG+L + K +E M +P +C++L+RGL + + KA ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 179 EILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDS 238
++ SG VPD ITYN++I CK G I +AL LL+ MS+S PDV+TYNT++R + D
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 239 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 298
G +QA+ QLQ C P +ITYT+L+E C+ G +A+++L++M +GC PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 299 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 358
N L+N C+ G L+E + H+ S+G + N +T+N +L S+CS W + E++L M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 359 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 418
P+V+T+NILIN LC+ LL RAID +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402
Query: 419 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVID 478
M+ + C PDIVTYNT+L A+ K+G VD A+E+L L + C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462
Query: 479 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 538
GL+K G + A++L +M G+ PD IT SL+ G R V+EA + G
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522
Query: 539 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 598
TY ++ GLCK ++ AI+ + M+ GCKP E Y +++G+ G+ EA++L
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550
BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 329.7 bits (844), Expect = 7.0e-89
Identity = 167/488 (34.22%), Postives = 276/488 (56.56%), Query Frame = 0
Query: 131 VRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 190
+ G+L+ + E MV G ++ ++ G CK G+ A + E+ G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 191 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 250
T+N L++G CK+G + A++++D M PDV TYN+++ LC G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 251 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 310
+ + R+C P+ +TY LI CKE+ V +A +L + KG PDV T+N LI G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 311 RLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 370
A++ M S GC+P+ T+N+++ S+CS G+ +A +L +M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 371 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 430
LI+ C+ A ++ ++M HG + NS++YN L+ G CK ++++ A + +D M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 431 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTEDA 490
G PD TYN+LLT C+ G + A +I+ ++S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 491 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 550
KLL ++ KG+ Y+ ++ GL R+ K EAI F + LE+ P+A++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 551 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 610
GLC R A+DFL ++ +G P +S +L EGL + + ++L+N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 611 KKSSAEQV 613
+ V
Sbjct: 715 SEEEVSMV 722
BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match:
A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)
HSP 1 Score: 1162.5 bits (3006), Expect = 0.0e+00
Identity = 586/622 (94.21%), Postives = 601/622 (96.62%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MDVTLPA+HYTDGFCL R S RNRGRKVRA RV+SEANSLRLYVGGKGK+RFLV+P
Sbjct: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
Query: 61 N----SEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQ 120
+ E+ I+KQLSIVRA+SRVDTFSSNGRLQHGEKNLH HLNGSNSSSSASNHSQ
Sbjct: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR 180
SFEEFENNNHLRRLVRNGELEEGFKF+E+MV GDIPDIIACTSLIRGLCKTGKTRKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN 300
KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+N
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
Query: 301 VLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
VLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 480
IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS+KGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540
Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
Query: 601 ELCSRGVVKKSSAEQVVVKNSF 619
ELCSRGVVKKSSAEQVVVKNSF
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNSF 622
BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match:
A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)
HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 570/619 (92.08%), Postives = 588/619 (94.99%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MD+TLPA+HYTDGFCL HRH+ +NR R+V AK RVSSE NSLRL+VG KGK RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 61 NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNG-SNSSSSASNHSQSFE 120
S+E +VRAV RVDTFSSNGRL HGEKNLHTHLNG S+SSSS+SN+SQS E
Sbjct: 61 GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120
Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360
Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
PSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
LDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480
Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
VGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
YNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL+EL
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600
Query: 601 SRGVVKKSSAEQVVVKNSF 619
SRGVV+KSSAEQVVVKN+F
Sbjct: 601 SRGVVRKSSAEQVVVKNTF 610
BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match:
A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)
HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 570/619 (92.08%), Postives = 588/619 (94.99%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MD+TLPA+HYTDGFCL HRH+ +NR R+V AK RVSSE NSLRL+VG KGK RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 61 NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNG-SNSSSSASNHSQSFE 120
S+E +VRAV RVDTFSSNGRL HGEKNLHTHLNG S+SSSS+SN+SQS E
Sbjct: 61 GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120
Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360
Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
PSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
LDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480
Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
VGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
YNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL+EL
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600
Query: 601 SRGVVKKSSAEQVVVKNSF 619
SRGVV+KSSAEQVVVKN+F
Sbjct: 601 SRGVVRKSSAEQVVVKNTF 610
BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match:
A0A6J1HFE3 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111462544 PE=4 SV=1)
HSP 1 Score: 1060.4 bits (2741), Expect = 2.8e-306
Identity = 531/618 (85.92%), Postives = 563/618 (91.10%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MD+TL A+HYTDGFCL R S +NRGR VRA++R + E NS+ +VGGKGK RFLV+PSD
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNRGRNVRAERRATPETNSVSFFVGGKGKPRFLVVPSD 60
Query: 61 NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQSFEE 120
SEE S VRAV + + Q GEKN+HTHLNGS+SSS +SNHSQSFEE
Sbjct: 61 CSEE---------SFVRAVLKNPS-------QQGEKNVHTHLNGSSSSSFSSNHSQSFEE 120
Query: 121 FENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEI 180
FENNNHLRRLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEI
Sbjct: 121 FENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEI 180
Query: 181 LEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQ 240
LEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+
Sbjct: 181 LEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKE 240
Query: 241 AMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 300
AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLIN
Sbjct: 241 AMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLIN 300
Query: 301 GICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSP 360
GICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSP
Sbjct: 301 GICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSP 360
Query: 361 SVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 420
SVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYL
Sbjct: 361 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYL 420
Query: 421 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 480
DIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVIDGLSK
Sbjct: 421 DIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKA 480
Query: 481 GKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITY 540
GKTEDA+KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN ITY
Sbjct: 481 GKTEDAVKLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITY 540
Query: 541 NSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCS 600
NSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+ELCS
Sbjct: 541 NSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCS 600
Query: 601 RGVVKKSSAEQVVVKNSF 619
RGV+KKSSAE+VV+KNSF
Sbjct: 601 RGVMKKSSAERVVIKNSF 602
BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match:
A0A6J1K404 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111492114 PE=4 SV=1)
HSP 1 Score: 1054.7 bits (2726), Expect = 1.5e-304
Identity = 530/618 (85.76%), Postives = 559/618 (90.45%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MD+TL A+HYTDGFCL R S +N R VRA++R + E NS+ VGGKGK RFLVIPSD
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNSSRNVRAERRATPETNSVSFSVGGKGKPRFLVIPSD 60
Query: 61 NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQSFEE 120
SEE S VRAV + LQ GEKNLHTHLNGS+SSS +SNHSQSFEE
Sbjct: 61 CSEE---------SFVRAVLK-------NPLQQGEKNLHTHLNGSSSSSFSSNHSQSFEE 120
Query: 121 FENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEI 180
FENNNHLRRLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEI
Sbjct: 121 FENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEI 180
Query: 181 LEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQ 240
LEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+
Sbjct: 181 LEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKE 240
Query: 241 AMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 300
AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLIN
Sbjct: 241 AMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLIN 300
Query: 301 GICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSP 360
GICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSP
Sbjct: 301 GICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSP 360
Query: 361 SVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 420
SVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYL
Sbjct: 361 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYL 420
Query: 421 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 480
DIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +K CSPVLITYNTVIDGLSK
Sbjct: 421 DIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKSCSPVLITYNTVIDGLSKA 480
Query: 481 GKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITY 540
GKTEDA+KLLDEMK KGLKPDIITYSSL+GGL REGKVDEAIAFFHDLEE+GVRPN ITY
Sbjct: 481 GKTEDAVKLLDEMKEKGLKPDIITYSSLIGGLCREGKVDEAIAFFHDLEEVGVRPNVITY 540
Query: 541 NSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCS 600
NSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+ELCS
Sbjct: 541 NSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCS 600
Query: 601 RGVVKKSSAEQVVVKNSF 619
RGV+KKSSAE+VV+KNSF
Sbjct: 601 RGVMKKSSAERVVIKNSF 602
BLAST of Lcy01g012050 vs. NCBI nr
Match:
XP_038886112.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])
HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 588/619 (94.99%), Postives = 597/619 (96.45%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MD+TLPA+HYTDGFCL HR ++NRGRKVRAK RVSSE NSLRLYVG KGK RFLVIPSD
Sbjct: 1 MDITLPAKHYTDGFCLFHRRPSKNRGRKVRAKGRVSSETNSLRLYVGEKGKPRFLVIPSD 60
Query: 61 NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNG-SNSSSSASNHSQSFE 120
SEEP +VRAV RVDTFSSNGRLQ GEKNLHTHLNG S+SSSS+SNHSQSFE
Sbjct: 61 CSEEP---------LVRAVPRVDTFSSNGRLQQGEKNLHTHLNGSSSSSSSSSNHSQSFE 120
Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 480
Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT
Sbjct: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
YNSIMLGLCKVRQT RAIDFLAYMVA+GCKPTEASYMILIEGLAYEGLAKEALELLNELC
Sbjct: 541 YNSIMLGLCKVRQTVRAIDFLAYMVAKGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
Query: 601 SRGVVKKSSAEQVVVKNSF 619
SRGVVKKSSAEQVVVKN+F
Sbjct: 601 SRGVVKKSSAEQVVVKNTF 610
BLAST of Lcy01g012050 vs. NCBI nr
Match:
XP_022132179.1 (pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia])
HSP 1 Score: 1162.5 bits (3006), Expect = 0.0e+00
Identity = 586/622 (94.21%), Postives = 601/622 (96.62%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MDVTLPA+HYTDGFCL R S RNRGRKVRA RV+SEANSLRLYVGGKGK+RFLV+P
Sbjct: 1 MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60
Query: 61 N----SEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQ 120
+ E+ I+KQLSIVRA+SRVDTFSSNGRLQHGEKNLH HLNGSNSSSSASNHSQ
Sbjct: 61 DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120
Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR 180
SFEEFENNNHLRRLVRNGELEEGFKF+E+MV GDIPDIIACTSLIRGLCKTGKTRKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180
Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN 300
KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+N
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300
Query: 301 VLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
VLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 480
IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS+KGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480
Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540
Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
Query: 601 ELCSRGVVKKSSAEQVVVKNSF 619
ELCSRGVVKKSSAEQVVVKNSF
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNSF 622
BLAST of Lcy01g012050 vs. NCBI nr
Match:
XP_008444958.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] >KAA0065076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 570/619 (92.08%), Postives = 588/619 (94.99%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MD+TLPA+HYTDGFCL HRH+ +NR R+V AK RVSSE NSLRL+VG KGK RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60
Query: 61 NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNG-SNSSSSASNHSQSFE 120
S+E +VRAV RVDTFSSNGRL HGEKNLHTHLNG S+SSSS+SN+SQS E
Sbjct: 61 GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120
Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360
Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
PSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
LDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480
Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
VGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
YNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL+EL
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600
Query: 601 SRGVVKKSSAEQVVVKNSF 619
SRGVV+KSSAEQVVVKN+F
Sbjct: 601 SRGVVRKSSAEQVVVKNTF 610
BLAST of Lcy01g012050 vs. NCBI nr
Match:
XP_011649703.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652149.1 hypothetical protein Csa_022252 [Cucumis sativus])
HSP 1 Score: 1115.9 bits (2885), Expect = 0.0e+00
Identity = 562/619 (90.79%), Postives = 583/619 (94.18%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MD+TLPA+HYTDGFCL HRH+A+NR R+V AK RVSSE NSLRL+ G KG RF VIPS
Sbjct: 1 MDLTLPAKHYTDGFCLFHRHTAKNRDRRVMAKGRVSSETNSLRLHAGEKG--RFFVIPSY 60
Query: 61 NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSA-SNHSQSFE 120
SEE +VRAV RVDTFSSNGRL HGEKNLHTHLNGS+SSSS+ SNHSQS E
Sbjct: 61 GSEE---------QLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHSQSSE 120
Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
E ENNNHLRRLVRNGELEEGFKFLEDMV RGDIPDIIACTSLIRGLCKTGKT KATRVME
Sbjct: 121 EVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVME 180
Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
ILEDSGAVPDVITYNVLISGYCK+GEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
+AMEVLDRQ+QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 EAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
NGICKEGRLDEAI+FLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK LAEM+RKGCS
Sbjct: 301 NGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 360
Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
PSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLH CK+KKM+RAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEY 420
Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 480
Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
VGKT+DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAIT
Sbjct: 481 VGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAIT 540
Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
YNSIMLGLCK RQT RAIDFLAYMVARGCKPTE SYMILIEGLAYEGLAKEALELLNELC
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELC 600
Query: 601 SRGVVKKSSAEQVVVKNSF 619
SRGVVKKSSAEQVVVKN+F
Sbjct: 601 SRGVVKKSSAEQVVVKNTF 608
BLAST of Lcy01g012050 vs. NCBI nr
Match:
XP_023546483.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546485.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546486.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546487.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1063.5 bits (2749), Expect = 6.8e-307
Identity = 534/618 (86.41%), Postives = 564/618 (91.26%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
MD+TL A+HYTDGFCL R S +NRGRKVRA++R + E NS+ +VGGKGK RFLVIPSD
Sbjct: 1 MDITLHAKHYTDGFCLFQRRSTKNRGRKVRAERRATPEINSVSFFVGGKGKPRFLVIPSD 60
Query: 61 NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQSFEE 120
SEE S VRAV + + Q GEKNLHTHLNGS+SSS +SNHSQSFEE
Sbjct: 61 CSEE---------SFVRAVLKNPS-------QQGEKNLHTHLNGSSSSSFSSNHSQSFEE 120
Query: 121 FENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEI 180
FENNNHLRRLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEI
Sbjct: 121 FENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEI 180
Query: 181 LEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQ 240
LEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+
Sbjct: 181 LEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKE 240
Query: 241 AMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 300
AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLIN
Sbjct: 241 AMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLIN 300
Query: 301 GICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSP 360
GICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSP
Sbjct: 301 GICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSP 360
Query: 361 SVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 420
SVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYL
Sbjct: 361 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYL 420
Query: 421 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 480
DIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVIDGLSK
Sbjct: 421 DIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKA 480
Query: 481 GKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITY 540
GKTEDA+KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN ITY
Sbjct: 481 GKTEDAVKLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITY 540
Query: 541 NSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCS 600
NSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+ELCS
Sbjct: 541 NSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCS 600
Query: 601 RGVVKKSSAEQVVVKNSF 619
RGV+KKSSAE+VV+KNSF
Sbjct: 601 RGVMKKSSAERVVIKNSF 602
BLAST of Lcy01g012050 vs. TAIR 10
Match:
AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 890.2 bits (2299), Expect = 9.6e-259
Identity = 450/618 (72.82%), Postives = 514/618 (83.17%), Query Frame = 0
Query: 1 MDVTLPARHYTDGFCLLHR-HSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPS 60
MD+ + +GFCL+ + H RG K+ R S +S ++ +G + ++R
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISS-KIPLGSRKRNR------ 60
Query: 61 DNSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGE--KNLHTHLNGSNSSSSASNHSQS 120
L +V A S+V++ NGR Q E + +++ NG N S+ N S +
Sbjct: 61 -------------LVLVSAASKVESSGLNGRAQKFETLSSGYSNSNG-NGHYSSVNSSFA 120
Query: 121 FEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRV 180
E+ E+NNHLR++VR GELEEGFKFLE+MVY G++PDII CT+LIRG C+ GKTRKA ++
Sbjct: 121 LEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 180
Query: 181 MEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGK 240
+EILE SGAVPDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCDSGK
Sbjct: 181 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 240
Query: 241 LKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 300
LKQAMEVLDR LQR+CYPDVITYTILIEATC++SGVG AMKLLDEMRD+GC PDVVTYNV
Sbjct: 241 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 300
Query: 301 LINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKG 360
L+NGICKEGRLDEAIKFLN MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG
Sbjct: 301 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 360
Query: 361 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI 420
SPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAI
Sbjct: 361 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 420
Query: 421 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 480
EYL+ MVSRGCYPDIVTYNT+LTALCKDGKV+ AVEILNQLSSKGCSPVLITYNTVIDGL
Sbjct: 421 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 480
Query: 481 SKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNA 540
+K GKT AIKLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+RPNA
Sbjct: 481 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 540
Query: 541 ITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNE 600
+T+NSIMLGLCK RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALELLNE
Sbjct: 541 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 597
Query: 601 LCSRGVVKKSSAEQVVVK 616
LC++G++KKSSAEQV K
Sbjct: 601 LCNKGLMKKSSAEQVAGK 597
BLAST of Lcy01g012050 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 450.7 bits (1158), Expect = 1.9e-126
Identity = 240/566 (42.40%), Postives = 345/566 (60.95%), Query Frame = 0
Query: 62 SEEPISSINKQLSIVRAVSRVDTFSS------NGR--LQHGEKNLH--THLNGSNSSSSA 121
+++P S+ + L + S + TFS+ NGR G +NL T + + +
Sbjct: 19 TQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERR 78
Query: 122 SNHSQS--FEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTG 181
HSQS F + + R R+G E LE MV +G PD+I CT LI+G
Sbjct: 79 QQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR 138
Query: 182 KTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYN 241
KA RVMEILE G PDV YN LI+G+CK I A ++LDRM SPD VTYN
Sbjct: 139 NIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 198
Query: 242 TILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK 301
++ +LC GKL A++VL++ L C P VITYTILIEAT E GV +A+KL+DEM +
Sbjct: 199 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 258
Query: 302 GCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDA 361
G KPD+ TYN +I G+CKEG +D A + + ++ GC+P+VI++NI+LR++ + G+W +
Sbjct: 259 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 318
Query: 362 EKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHG 421
EKL+ +M + C P+VVT++ILI LCR G + A+++L+ M + G TP++ SY+PL+
Sbjct: 319 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 378
Query: 422 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 481
FC+E ++D AIE+L+ M+S GC PDIV YNT+L LCK+GK D A+EI +L GCSP
Sbjct: 379 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 438
Query: 482 LITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFH 541
+YNT+ L G A+ ++ EM G+ PD ITY+S++ L REG VDEA
Sbjct: 439 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 498
Query: 542 DLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEG 601
D+ P+ +TYN ++LG CK + AI+ L MV GC+P E +Y +LIEG+ + G
Sbjct: 499 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 558
Query: 602 LAKEALELLNELCSRGVVKKSSAEQV 613
EA+EL N+L + + S +++
Sbjct: 559 YRAEAMELANDLVRIDAISEYSFKRL 583
BLAST of Lcy01g012050 vs. TAIR 10
Match:
AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 350.9 bits (899), Expect = 2.1e-96
Identity = 188/486 (38.68%), Postives = 291/486 (59.88%), Query Frame = 0
Query: 136 LEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 195
L + F LE +V G P++ T L+ LCK + +KA RV+E++ SG +PD Y
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 196 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 255
L++ CK G +G A+QL+++M + VTYN ++R LC G L Q+++ ++R +Q+
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 256 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 315
P+ TY+ L+EA KE G +A+KLLDE+ KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 316 KFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 375
+P+ G + NV+++NI+LR +C GRW +A LLAEM +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326
Query: 376 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 435
G +A+ VL++M + H + SYNP++ CKE K+D ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 436 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 495
+ TYN + + + KV A I+ LS+K Y +VI L + G T A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446
Query: 496 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYNSIMLGLCK 555
EM G PD TYS+L+ GL EG A+ +EE +P +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506
Query: 556 VRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 615
+R+T A++ MV + P E +Y IL+EG+A+E + A E+L+EL R V+ +++
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566
BLAST of Lcy01g012050 vs. TAIR 10
Match:
AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 345.5 bits (885), Expect = 8.8e-95
Identity = 183/483 (37.89%), Postives = 274/483 (56.73%), Query Frame = 0
Query: 119 EEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVM 178
+E NN L L NG+L + K +E M +P +C++L+RGL + + KA ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 179 EILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDS 238
++ SG VPD ITYN++I CK G I +AL LL+ MS+S PDV+TYNT++R + D
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 239 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 298
G +QA+ QLQ C P +ITYT+L+E C+ G +A+++L++M +GC PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 299 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 358
N L+N C+ G L+E + H+ S+G + N +T+N +L S+CS W + E++L M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 359 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 418
P+V+T+NILIN LC+ LL RAID +
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402
Query: 419 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVID 478
M+ + C PDIVTYNT+L A+ K+G VD A+E+L L + C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462
Query: 479 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 538
GL+K G + A++L +M G+ PD IT SL+ G R V+EA + G
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522
Query: 539 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 598
TY ++ GLCK ++ AI+ + M+ GCKP E Y +++G+ G+ EA++L
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550
BLAST of Lcy01g012050 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 329.7 bits (844), Expect = 5.0e-90
Identity = 167/488 (34.22%), Postives = 276/488 (56.56%), Query Frame = 0
Query: 131 VRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 190
+ G+L+ + E MV G ++ ++ G CK G+ A + E+ G PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294
Query: 191 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 250
T+N L++G CK+G + A++++D M PDV TYN+++ LC G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354
Query: 251 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 310
+ + R+C P+ +TY LI CKE+ V +A +L + KG PDV T+N LI G+C
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414
Query: 311 RLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 370
A++ M S GC+P+ T+N+++ S+CS G+ +A +L +M GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474
Query: 371 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 430
LI+ C+ A ++ ++M HG + NS++YN L+ G CK ++++ A + +D M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 431 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTEDA 490
G PD TYN+LLT C+ G + A +I+ ++S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 491 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 550
KLL ++ KG+ Y+ ++ GL R+ K EAI F + LE+ P+A++Y +
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 551 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 610
GLC R A+DFL ++ +G P +S +L EGL + + ++L+N + +
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714
Query: 611 KKSSAEQV 613
+ V
Sbjct: 715 SEEEVSMV 722
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q3EDF8 | 1.3e-257 | 72.82 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 2.7e-125 | 42.40 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
A3KPF8 | 2.9e-95 | 38.68 | Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... | [more] |
Q9FRS4 | 1.2e-93 | 37.89 | Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... | [more] |
Q9LFF1 | 7.0e-89 | 34.22 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BSC2 | 0.0e+00 | 94.21 | pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... | [more] |
A0A5A7VFH1 | 0.0e+00 | 92.08 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BB35 | 0.0e+00 | 92.08 | pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1HFE3 | 2.8e-306 | 85.92 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... | [more] |
A0A6J1K404 | 1.5e-304 | 85.76 | pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... | [more] |
Match Name | E-value | Identity | Description | |
XP_038886112.1 | 0.0e+00 | 94.99 | pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida] | [more] |
XP_022132179.1 | 0.0e+00 | 94.21 | pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia] | [more] |
XP_008444958.1 | 0.0e+00 | 92.08 | PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] ... | [more] |
XP_011649703.1 | 0.0e+00 | 90.79 | pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652... | [more] |
XP_023546483.1 | 6.8e-307 | 86.41 | pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp... | [more] |
Match Name | E-value | Identity | Description | |
AT1G09900.1 | 9.6e-259 | 72.82 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G04760.1 | 1.9e-126 | 42.40 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT1G79080.1 | 2.1e-96 | 38.68 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G08610.1 | 8.8e-95 | 37.89 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G53700.1 | 5.0e-90 | 34.22 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |