Lcy01g012050 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g012050
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr01: 32842019 .. 32844442 (+)
RNA-Seq ExpressionLcy01g012050
SyntenyLcy01g012050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGCTTTCCGCCTCCTACTCATACGGCTGGCTTTGCTTCAGTTGCTCGCCTTCAGCAGTCCATCAGCGCCATCTCTCCCCACCCAAACAGACGACACGCTCAGAATCTGGATAAGCAAGCAACACGCCGCCTCACCACTCACCCACCTCCATTTTTCCCTCTTCCATTTTCACTTTCCCTGTAAGTTTCCCCCTCTCTTAATCTCTCTCTTTCTGCAAACCCTTAATCTCTGCCCTTCCGTAGACTGGAAAAACAAGCCCCCATTGACCCACTTCTTTATTTTCTTCACATTCGTCTAAAATGGAGTTCTAAGCTTCGACACCTTTGTTTCCTTCCAGTTGAAGGAGGATTATGGATGTAACGTTGCCTGCAAGGCATTATACAGATGGGTTCTGTTTGCTTCATCGTCACAGCGCCAGAAATCGCGGCCGTAAAGTTAGGGCCAAGCAAAGGGTTTCTTCGGAGGCCAATTCTTTGAGGCTTTATGTGGGAGGAAAAGGAAAGTCTCGGTTCCTCGTTATTCCTTCCGATAATTCTGAAGAACCCATTTCTTCGATCAATAAACAGCTGAGCATTGTTCGTGCGGTTTCGAGGGTCGATACGTTTAGTTCCAATGGCAGATTGCAACACGGGGAGAAAAATCTTCATACCCATTTGAATGGCTCCAATTCCTCTTCGTCCGCCTCGAATCATTCGCAGAGTTTTGAGGAATTCGAGAACAACAATCATCTTCGTCGACTGGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTCTTGAGGATATGGTTTATCGTGGTGATATTCCTGATATAATTGCCTGCACTAGTTTGATTCGTGGTTTGTGTAAGACTGGAAAGACTAGGAAAGCAACTCGGGTTATGGAAATTTTGGAAGACTCGGGGGCTGTTCCTGATGTCATAACTTACAATGTTCTAATTAGTGGTTACTGTAAATCTGGTGAAATTGGAAGTGCTTTACAACTTTTGGATCGAATGAGTGTTTCTCCTGATGTTGTTACATATAATACAATCTTGCGTACTCTCTGTGACAGTGGAAAGTTGAAACAAGCAATGGAAGTTCTTGACAGACAGTTGCAGAGGGAGTGTTATCCTGATGTAATAACTTACACTATATTGATTGAAGCAACTTGTAAGGAAAGTGGTGTTGGGCAGGCAATGAAATTGTTGGATGAAATGAGAGACAAAGGATGTAAGCCTGATGTTGTCACTTACAATGTTCTTATCAATGGGATTTGCAAGGAAGGAAGGTTGGATGAAGCTATTAAGTTTTTGAATCATATGCCTTCCTATGGCTGCCAACCAAATGTGATCACTCATAATATCATTTTGCGTAGCATGTGTAGTACAGGGAGGTGGATGGATGCCGAGAAGCTGTTGGCCGAAATGGTTCGGAAGGGATGTTCTCCAAGTGTTGTCACTTTCAACATCTTGATTAATTTCTTGTGTCGAAAGGGCTTGCTTGGTCGAGCAATCGATGTTTTGGAGAAGATGCCTCAGCATGGCTGTACTCCGAATTCCTTGAGCTACAACCCGTTGCTCCATGGATTCTGCAAAGAGAAGAAGATGGATCGGGCGATCGAGTATTTGGATATCATGGTTTCGAGAGGCTGTTACCCTGATATTGTGACCTATAATACTCTATTGACAGCATTGTGCAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTTAGTAGCAAGGGTTGCTCTCCTGTACTGATTACATACAACACAGTCATTGATGGGCTCTCAAAGGTAGGCAAAACAGAAGATGCCATAAAACTTCTAGATGAGATGAAGGGAAAAGGTCTCAAACCGGATATAATTACGTACTCGTCGCTCGTCGGAGGACTTAGCAGGGAAGGAAAAGTTGATGAAGCAATTGCATTTTTCCATGATTTAGAAGAAATGGGTGTGAGGCCAAATGCAATCACATACAACTCTATCATGTTAGGACTCTGTAAGGTTCGACAAACCAGTCGAGCCATCGACTTCTTGGCATACATGGTTGCCCGAGGCTGTAAACCGACCGAGGCGTCGTACATGATTCTCATTGAAGGATTGGCCTATGAAGGTTTAGCCAAGGAGGCATTGGAGTTGCTTAATGAATTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGCAGAGCAGGTGGTGGTCAAAAACTCTTTTTGATGTATTTTTGCTTTAGCCATTGTTTGATGGCCTTAGATTTCATCATTAAATCTTCATAGATGTGGGATTTTTTATGACCTTAGCGCCAAATTATGTTATCATCTTTGTCAAAATGGGTAGAATCCAAATCAATTTTGTAAGATAAAATGCTCAACTTGAGTAGTTTTGTAGTATACACCAGATTTGATAAAGCATCCTCCGTTAATTTGCATTTTA

mRNA sequence

GAGCTTTCCGCCTCCTACTCATACGGCTGGCTTTGCTTCAGTTGCTCGCCTTCAGCAGTCCATCAGCGCCATCTCTCCCCACCCAAACAGACGACACGCTCAGAATCTGGATAAGCAAGCAACACGCCGCCTCACCACTCACCCACCTCCATTTTTCCCTCTTCCATTTTCACTTTCCCTTTGAAGGAGGATTATGGATGTAACGTTGCCTGCAAGGCATTATACAGATGGGTTCTGTTTGCTTCATCGTCACAGCGCCAGAAATCGCGGCCGTAAAGTTAGGGCCAAGCAAAGGGTTTCTTCGGAGGCCAATTCTTTGAGGCTTTATGTGGGAGGAAAAGGAAAGTCTCGGTTCCTCGTTATTCCTTCCGATAATTCTGAAGAACCCATTTCTTCGATCAATAAACAGCTGAGCATTGTTCGTGCGGTTTCGAGGGTCGATACGTTTAGTTCCAATGGCAGATTGCAACACGGGGAGAAAAATCTTCATACCCATTTGAATGGCTCCAATTCCTCTTCGTCCGCCTCGAATCATTCGCAGAGTTTTGAGGAATTCGAGAACAACAATCATCTTCGTCGACTGGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTCTTGAGGATATGGTTTATCGTGGTGATATTCCTGATATAATTGCCTGCACTAGTTTGATTCGTGGTTTGTGTAAGACTGGAAAGACTAGGAAAGCAACTCGGGTTATGGAAATTTTGGAAGACTCGGGGGCTGTTCCTGATGTCATAACTTACAATGTTCTAATTAGTGGTTACTGTAAATCTGGTGAAATTGGAAGTGCTTTACAACTTTTGGATCGAATGAGTGTTTCTCCTGATGTTGTTACATATAATACAATCTTGCGTACTCTCTGTGACAGTGGAAAGTTGAAACAAGCAATGGAAGTTCTTGACAGACAGTTGCAGAGGGAGTGTTATCCTGATGTAATAACTTACACTATATTGATTGAAGCAACTTGTAAGGAAAGTGGTGTTGGGCAGGCAATGAAATTGTTGGATGAAATGAGAGACAAAGGATGTAAGCCTGATGTTGTCACTTACAATGTTCTTATCAATGGGATTTGCAAGGAAGGAAGGTTGGATGAAGCTATTAAGTTTTTGAATCATATGCCTTCCTATGGCTGCCAACCAAATGTGATCACTCATAATATCATTTTGCGTAGCATGTGTAGTACAGGGAGGTGGATGGATGCCGAGAAGCTGTTGGCCGAAATGGTTCGGAAGGGATGTTCTCCAAGTGTTGTCACTTTCAACATCTTGATTAATTTCTTGTGTCGAAAGGGCTTGCTTGGTCGAGCAATCGATGTTTTGGAGAAGATGCCTCAGCATGGCTGTACTCCGAATTCCTTGAGCTACAACCCGTTGCTCCATGGATTCTGCAAAGAGAAGAAGATGGATCGGGCGATCGAGTATTTGGATATCATGGTTTCGAGAGGCTGTTACCCTGATATTGTGACCTATAATACTCTATTGACAGCATTGTGCAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTTAGTAGCAAGGGTTGCTCTCCTGTACTGATTACATACAACACAGTCATTGATGGGCTCTCAAAGGTAGGCAAAACAGAAGATGCCATAAAACTTCTAGATGAGATGAAGGGAAAAGGTCTCAAACCGGATATAATTACGTACTCGTCGCTCGTCGGAGGACTTAGCAGGGAAGGAAAAGTTGATGAAGCAATTGCATTTTTCCATGATTTAGAAGAAATGGGTGTGAGGCCAAATGCAATCACATACAACTCTATCATGTTAGGACTCTGTAAGGTTCGACAAACCAGTCGAGCCATCGACTTCTTGGCATACATGGTTGCCCGAGGCTGTAAACCGACCGAGGCGTCGTACATGATTCTCATTGAAGGATTGGCCTATGAAGGTTTAGCCAAGGAGGCATTGGAGTTGCTTAATGAATTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGCAGAGCAGGTGGTGGTCAAAAACTCTTTTTGATGTATTTTTGCTTTAGCCATTGTTTGATGGCCTTAGATTTCATCATTAAATCTTCATAGATGTGGGATTTTTTATGACCTTAGCGCCAAATTATGTTATCATCTTTGTCAAAATGGGTAGAATCCAAATCAATTTTGTAAGATAAAATGCTCAACTTGAGTAGTTTTGTAGTATACACCAGATTTGATAAAGCATCCTCCGTTAATTTGCATTTTA

Coding sequence (CDS)

ATGGATGTAACGTTGCCTGCAAGGCATTATACAGATGGGTTCTGTTTGCTTCATCGTCACAGCGCCAGAAATCGCGGCCGTAAAGTTAGGGCCAAGCAAAGGGTTTCTTCGGAGGCCAATTCTTTGAGGCTTTATGTGGGAGGAAAAGGAAAGTCTCGGTTCCTCGTTATTCCTTCCGATAATTCTGAAGAACCCATTTCTTCGATCAATAAACAGCTGAGCATTGTTCGTGCGGTTTCGAGGGTCGATACGTTTAGTTCCAATGGCAGATTGCAACACGGGGAGAAAAATCTTCATACCCATTTGAATGGCTCCAATTCCTCTTCGTCCGCCTCGAATCATTCGCAGAGTTTTGAGGAATTCGAGAACAACAATCATCTTCGTCGACTGGTAAGAAATGGGGAATTGGAAGAAGGGTTTAAATTTCTTGAGGATATGGTTTATCGTGGTGATATTCCTGATATAATTGCCTGCACTAGTTTGATTCGTGGTTTGTGTAAGACTGGAAAGACTAGGAAAGCAACTCGGGTTATGGAAATTTTGGAAGACTCGGGGGCTGTTCCTGATGTCATAACTTACAATGTTCTAATTAGTGGTTACTGTAAATCTGGTGAAATTGGAAGTGCTTTACAACTTTTGGATCGAATGAGTGTTTCTCCTGATGTTGTTACATATAATACAATCTTGCGTACTCTCTGTGACAGTGGAAAGTTGAAACAAGCAATGGAAGTTCTTGACAGACAGTTGCAGAGGGAGTGTTATCCTGATGTAATAACTTACACTATATTGATTGAAGCAACTTGTAAGGAAAGTGGTGTTGGGCAGGCAATGAAATTGTTGGATGAAATGAGAGACAAAGGATGTAAGCCTGATGTTGTCACTTACAATGTTCTTATCAATGGGATTTGCAAGGAAGGAAGGTTGGATGAAGCTATTAAGTTTTTGAATCATATGCCTTCCTATGGCTGCCAACCAAATGTGATCACTCATAATATCATTTTGCGTAGCATGTGTAGTACAGGGAGGTGGATGGATGCCGAGAAGCTGTTGGCCGAAATGGTTCGGAAGGGATGTTCTCCAAGTGTTGTCACTTTCAACATCTTGATTAATTTCTTGTGTCGAAAGGGCTTGCTTGGTCGAGCAATCGATGTTTTGGAGAAGATGCCTCAGCATGGCTGTACTCCGAATTCCTTGAGCTACAACCCGTTGCTCCATGGATTCTGCAAAGAGAAGAAGATGGATCGGGCGATCGAGTATTTGGATATCATGGTTTCGAGAGGCTGTTACCCTGATATTGTGACCTATAATACTCTATTGACAGCATTGTGCAAAGATGGGAAGGTAGATGTTGCAGTTGAGATACTGAATCAACTTAGTAGCAAGGGTTGCTCTCCTGTACTGATTACATACAACACAGTCATTGATGGGCTCTCAAAGGTAGGCAAAACAGAAGATGCCATAAAACTTCTAGATGAGATGAAGGGAAAAGGTCTCAAACCGGATATAATTACGTACTCGTCGCTCGTCGGAGGACTTAGCAGGGAAGGAAAAGTTGATGAAGCAATTGCATTTTTCCATGATTTAGAAGAAATGGGTGTGAGGCCAAATGCAATCACATACAACTCTATCATGTTAGGACTCTGTAAGGTTCGACAAACCAGTCGAGCCATCGACTTCTTGGCATACATGGTTGCCCGAGGCTGTAAACCGACCGAGGCGTCGTACATGATTCTCATTGAAGGATTGGCCTATGAAGGTTTAGCCAAGGAGGCATTGGAGTTGCTTAATGAATTGTGCTCTAGAGGAGTTGTGAAGAAGAGTTCTGCAGAGCAGGTGGTGGTCAAAAACTCTTTTTGA

Protein sequence

MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSDNSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQSFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVVKNSF
Homology
BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 1.3e-257
Identity = 450/618 (72.82%), Postives = 514/618 (83.17%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHR-HSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPS 60
           MD+ +      +GFCL+ + H    RG K+    R S   +S ++ +G + ++R      
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISS-KIPLGSRKRNR------ 60

Query: 61  DNSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGE--KNLHTHLNGSNSSSSASNHSQS 120
                        L +V A S+V++   NGR Q  E   + +++ NG N   S+ N S +
Sbjct: 61  -------------LVLVSAASKVESSGLNGRAQKFETLSSGYSNSNG-NGHYSSVNSSFA 120

Query: 121 FEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRV 180
            E+ E+NNHLR++VR GELEEGFKFLE+MVY G++PDII CT+LIRG C+ GKTRKA ++
Sbjct: 121 LEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 180

Query: 181 MEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGK 240
           +EILE SGAVPDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCDSGK
Sbjct: 181 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 240

Query: 241 LKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 300
           LKQAMEVLDR LQR+CYPDVITYTILIEATC++SGVG AMKLLDEMRD+GC PDVVTYNV
Sbjct: 241 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 300

Query: 301 LINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKG 360
           L+NGICKEGRLDEAIKFLN MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG
Sbjct: 301 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 360

Query: 361 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI 420
            SPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAI
Sbjct: 361 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 420

Query: 421 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 480
           EYL+ MVSRGCYPDIVTYNT+LTALCKDGKV+ AVEILNQLSSKGCSPVLITYNTVIDGL
Sbjct: 421 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 480

Query: 481 SKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNA 540
           +K GKT  AIKLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+RPNA
Sbjct: 481 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 540

Query: 541 ITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNE 600
           +T+NSIMLGLCK RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALELLNE
Sbjct: 541 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 597

Query: 601 LCSRGVVKKSSAEQVVVK 616
           LC++G++KKSSAEQV  K
Sbjct: 601 LCNKGLMKKSSAEQVAGK 597

BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match: Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 2.7e-125
Identity = 240/566 (42.40%), Postives = 345/566 (60.95%), Query Frame = 0

Query: 62  SEEPISSINKQLSIVRAVSRVDTFSS------NGR--LQHGEKNLH--THLNGSNSSSSA 121
           +++P S+ +  L +    S + TFS+      NGR     G +NL   T  + +  +   
Sbjct: 19  TQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERR 78

Query: 122 SNHSQS--FEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTG 181
             HSQS  F + +      R  R+G   E    LE MV +G  PD+I CT LI+G     
Sbjct: 79  QQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR 138

Query: 182 KTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYN 241
              KA RVMEILE  G  PDV  YN LI+G+CK   I  A ++LDRM     SPD VTYN
Sbjct: 139 NIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 198

Query: 242 TILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK 301
            ++ +LC  GKL  A++VL++ L   C P VITYTILIEAT  E GV +A+KL+DEM  +
Sbjct: 199 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 258

Query: 302 GCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDA 361
           G KPD+ TYN +I G+CKEG +D A + + ++   GC+P+VI++NI+LR++ + G+W + 
Sbjct: 259 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 318

Query: 362 EKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHG 421
           EKL+ +M  + C P+VVT++ILI  LCR G +  A+++L+ M + G TP++ SY+PL+  
Sbjct: 319 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 378

Query: 422 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 481
           FC+E ++D AIE+L+ M+S GC PDIV YNT+L  LCK+GK D A+EI  +L   GCSP 
Sbjct: 379 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 438

Query: 482 LITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFH 541
             +YNT+   L   G    A+ ++ EM   G+ PD ITY+S++  L REG VDEA     
Sbjct: 439 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 498

Query: 542 DLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEG 601
           D+      P+ +TYN ++LG CK  +   AI+ L  MV  GC+P E +Y +LIEG+ + G
Sbjct: 499 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 558

Query: 602 LAKEALELLNELCSRGVVKKSSAEQV 613
              EA+EL N+L     + + S +++
Sbjct: 559 YRAEAMELANDLVRIDAISEYSFKRL 583

BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match: A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 2.9e-95
Identity = 188/486 (38.68%), Postives = 291/486 (59.88%), Query Frame = 0

Query: 136 LEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 195
           L + F  LE +V  G  P++   T L+  LCK  + +KA RV+E++  SG +PD   Y  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 196 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 255
           L++  CK G +G A+QL+++M       + VTYN ++R LC  G L Q+++ ++R +Q+ 
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 256 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 315
             P+  TY+ L+EA  KE G  +A+KLLDE+  KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 316 KFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 375
                +P+ G + NV+++NI+LR +C  GRW +A  LLAEM     +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 376 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 435
              G   +A+ VL++M +  H     + SYNP++   CKE K+D  ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386

Query: 436 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 495
           +  TYN + +    + KV  A  I+  LS+K        Y +VI  L + G T  A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446

Query: 496 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYNSIMLGLCK 555
            EM   G  PD  TYS+L+ GL  EG    A+     +EE    +P    +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506

Query: 556 VRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 615
           +R+T  A++    MV +   P E +Y IL+EG+A+E   + A E+L+EL  R V+ +++ 
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566

BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match: Q9FRS4 (Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX=3702 GN=At1g08610 PE=2 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.2e-93
Identity = 183/483 (37.89%), Postives = 274/483 (56.73%), Query Frame = 0

Query: 119 EEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVM 178
           +E  NN  L  L  NG+L +  K +E M     +P   +C++L+RGL +  +  KA  ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 179 EILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDS 238
            ++  SG VPD ITYN++I   CK G I +AL LL+ MS+S   PDV+TYNT++R + D 
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 239 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 298
           G  +QA+     QLQ  C P +ITYT+L+E  C+  G  +A+++L++M  +GC PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282

Query: 299 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 358
           N L+N  C+ G L+E    + H+ S+G + N +T+N +L S+CS   W + E++L  M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342

Query: 359 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 418
               P+V+T+NILIN LC+  LL RAID   +                            
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402

Query: 419 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVID 478
                  M+ + C PDIVTYNT+L A+ K+G VD A+E+L  L +  C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462

Query: 479 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 538
           GL+K G  + A++L  +M   G+ PD IT  SL+ G  R   V+EA     +    G   
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522

Query: 539 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 598
              TY  ++ GLCK ++   AI+ +  M+  GCKP E  Y  +++G+   G+  EA++L 
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550

BLAST of Lcy01g012050 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.0e-89
Identity = 167/488 (34.22%), Postives = 276/488 (56.56%), Query Frame = 0

Query: 131 VRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 190
           +  G+L+   +  E MV  G     ++   ++ G CK G+   A   + E+    G  PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 191 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 250
             T+N L++G CK+G +  A++++D M      PDV TYN+++  LC  G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 251 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 310
           + + R+C P+ +TY  LI   CKE+ V +A +L   +  KG  PDV T+N LI G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 311 RLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 370
               A++    M S GC+P+  T+N+++ S+CS G+  +A  +L +M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 371 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 430
            LI+  C+      A ++ ++M  HG + NS++YN L+ G CK ++++ A + +D M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 431 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTEDA 490
           G  PD  TYN+LLT  C+ G +  A +I+  ++S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 491 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 550
            KLL  ++ KG+      Y+ ++ GL R+ K  EAI  F + LE+    P+A++Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 551 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 610
           GLC      R A+DFL  ++ +G  P  +S  +L EGL    + +  ++L+N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 611 KKSSAEQV 613
            +     V
Sbjct: 715 SEEEVSMV 722

BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match: A0A6J1BSC2 (pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=3673 GN=LOC111005101 PE=4 SV=1)

HSP 1 Score: 1162.5 bits (3006), Expect = 0.0e+00
Identity = 586/622 (94.21%), Postives = 601/622 (96.62%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MDVTLPA+HYTDGFCL  R S RNRGRKVRA  RV+SEANSLRLYVGGKGK+RFLV+P  
Sbjct: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60

Query: 61  N----SEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQ 120
           +     E+    I+KQLSIVRA+SRVDTFSSNGRLQHGEKNLH HLNGSNSSSSASNHSQ
Sbjct: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120

Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR 180
           SFEEFENNNHLRRLVRNGELEEGFKF+E+MV  GDIPDIIACTSLIRGLCKTGKTRKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180

Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
           VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240

Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN 300
           KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+N
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300

Query: 301 VLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
           VLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360

Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
           GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420

Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 480
           IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS+KGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480

Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
           LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540

Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
           AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600

Query: 601 ELCSRGVVKKSSAEQVVVKNSF 619
           ELCSRGVVKKSSAEQVVVKNSF
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNSF 622

BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match: A0A5A7VFH1 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004060 PE=4 SV=1)

HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 570/619 (92.08%), Postives = 588/619 (94.99%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MD+TLPA+HYTDGFCL HRH+ +NR R+V AK RVSSE NSLRL+VG KGK RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 61  NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNG-SNSSSSASNHSQSFE 120
            S+E          +VRAV RVDTFSSNGRL HGEKNLHTHLNG S+SSSS+SN+SQS E
Sbjct: 61  GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120

Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
           EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180

Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
           ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240

Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
           QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300

Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
           NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360

Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
           PSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420

Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
           LDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480

Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
           VGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540

Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
           YNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL+EL 
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600

Query: 601 SRGVVKKSSAEQVVVKNSF 619
           SRGVV+KSSAEQVVVKN+F
Sbjct: 601 SRGVVRKSSAEQVVVKNTF 610

BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match: A0A1S3BB35 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103488143 PE=4 SV=1)

HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 570/619 (92.08%), Postives = 588/619 (94.99%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MD+TLPA+HYTDGFCL HRH+ +NR R+V AK RVSSE NSLRL+VG KGK RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 61  NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNG-SNSSSSASNHSQSFE 120
            S+E          +VRAV RVDTFSSNGRL HGEKNLHTHLNG S+SSSS+SN+SQS E
Sbjct: 61  GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120

Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
           EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180

Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
           ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240

Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
           QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300

Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
           NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360

Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
           PSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420

Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
           LDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480

Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
           VGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540

Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
           YNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL+EL 
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600

Query: 601 SRGVVKKSSAEQVVVKNSF 619
           SRGVV+KSSAEQVVVKN+F
Sbjct: 601 SRGVVRKSSAEQVVVKNTF 610

BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match: A0A6J1HFE3 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111462544 PE=4 SV=1)

HSP 1 Score: 1060.4 bits (2741), Expect = 2.8e-306
Identity = 531/618 (85.92%), Postives = 563/618 (91.10%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MD+TL A+HYTDGFCL  R S +NRGR VRA++R + E NS+  +VGGKGK RFLV+PSD
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNRGRNVRAERRATPETNSVSFFVGGKGKPRFLVVPSD 60

Query: 61  NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQSFEE 120
            SEE         S VRAV +  +       Q GEKN+HTHLNGS+SSS +SNHSQSFEE
Sbjct: 61  CSEE---------SFVRAVLKNPS-------QQGEKNVHTHLNGSSSSSFSSNHSQSFEE 120

Query: 121 FENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEI 180
           FENNNHLRRLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEI
Sbjct: 121 FENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEI 180

Query: 181 LEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQ 240
           LEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+
Sbjct: 181 LEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKE 240

Query: 241 AMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 300
           AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLIN
Sbjct: 241 AMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLIN 300

Query: 301 GICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSP 360
           GICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSP
Sbjct: 301 GICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSP 360

Query: 361 SVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 420
           SVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYL
Sbjct: 361 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYL 420

Query: 421 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 480
           DIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVIDGLSK 
Sbjct: 421 DIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKA 480

Query: 481 GKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITY 540
           GKTEDA+KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN ITY
Sbjct: 481 GKTEDAVKLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITY 540

Query: 541 NSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCS 600
           NSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+ELCS
Sbjct: 541 NSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCS 600

Query: 601 RGVVKKSSAEQVVVKNSF 619
           RGV+KKSSAE+VV+KNSF
Sbjct: 601 RGVMKKSSAERVVIKNSF 602

BLAST of Lcy01g012050 vs. ExPASy TrEMBL
Match: A0A6J1K404 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima OX=3661 GN=LOC111492114 PE=4 SV=1)

HSP 1 Score: 1054.7 bits (2726), Expect = 1.5e-304
Identity = 530/618 (85.76%), Postives = 559/618 (90.45%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MD+TL A+HYTDGFCL  R S +N  R VRA++R + E NS+   VGGKGK RFLVIPSD
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNSSRNVRAERRATPETNSVSFSVGGKGKPRFLVIPSD 60

Query: 61  NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQSFEE 120
            SEE         S VRAV +         LQ GEKNLHTHLNGS+SSS +SNHSQSFEE
Sbjct: 61  CSEE---------SFVRAVLK-------NPLQQGEKNLHTHLNGSSSSSFSSNHSQSFEE 120

Query: 121 FENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEI 180
           FENNNHLRRLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEI
Sbjct: 121 FENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEI 180

Query: 181 LEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQ 240
           LEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+
Sbjct: 181 LEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKE 240

Query: 241 AMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 300
           AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLIN
Sbjct: 241 AMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLIN 300

Query: 301 GICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSP 360
           GICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSP
Sbjct: 301 GICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSP 360

Query: 361 SVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 420
           SVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYL
Sbjct: 361 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYL 420

Query: 421 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 480
           DIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +K CSPVLITYNTVIDGLSK 
Sbjct: 421 DIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKSCSPVLITYNTVIDGLSKA 480

Query: 481 GKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITY 540
           GKTEDA+KLLDEMK KGLKPDIITYSSL+GGL REGKVDEAIAFFHDLEE+GVRPN ITY
Sbjct: 481 GKTEDAVKLLDEMKEKGLKPDIITYSSLIGGLCREGKVDEAIAFFHDLEEVGVRPNVITY 540

Query: 541 NSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCS 600
           NSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+ELCS
Sbjct: 541 NSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCS 600

Query: 601 RGVVKKSSAEQVVVKNSF 619
           RGV+KKSSAE+VV+KNSF
Sbjct: 601 RGVMKKSSAERVVIKNSF 602

BLAST of Lcy01g012050 vs. NCBI nr
Match: XP_038886112.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])

HSP 1 Score: 1165.2 bits (3013), Expect = 0.0e+00
Identity = 588/619 (94.99%), Postives = 597/619 (96.45%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MD+TLPA+HYTDGFCL HR  ++NRGRKVRAK RVSSE NSLRLYVG KGK RFLVIPSD
Sbjct: 1   MDITLPAKHYTDGFCLFHRRPSKNRGRKVRAKGRVSSETNSLRLYVGEKGKPRFLVIPSD 60

Query: 61  NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNG-SNSSSSASNHSQSFE 120
            SEEP         +VRAV RVDTFSSNGRLQ GEKNLHTHLNG S+SSSS+SNHSQSFE
Sbjct: 61  CSEEP---------LVRAVPRVDTFSSNGRLQQGEKNLHTHLNGSSSSSSSSSNHSQSFE 120

Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
           EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180

Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
           ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240

Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
           QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300

Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
           NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360

Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
           PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420

Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
           LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 480

Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
           VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT
Sbjct: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540

Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
           YNSIMLGLCKVRQT RAIDFLAYMVA+GCKPTEASYMILIEGLAYEGLAKEALELLNELC
Sbjct: 541 YNSIMLGLCKVRQTVRAIDFLAYMVAKGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600

Query: 601 SRGVVKKSSAEQVVVKNSF 619
           SRGVVKKSSAEQVVVKN+F
Sbjct: 601 SRGVVKKSSAEQVVVKNTF 610

BLAST of Lcy01g012050 vs. NCBI nr
Match: XP_022132179.1 (pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia])

HSP 1 Score: 1162.5 bits (3006), Expect = 0.0e+00
Identity = 586/622 (94.21%), Postives = 601/622 (96.62%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MDVTLPA+HYTDGFCL  R S RNRGRKVRA  RV+SEANSLRLYVGGKGK+RFLV+P  
Sbjct: 1   MDVTLPAKHYTDGFCLFQRQSTRNRGRKVRAGGRVTSEANSLRLYVGGKGKARFLVVPPS 60

Query: 61  N----SEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQ 120
           +     E+    I+KQLSIVRA+SRVDTFSSNGRLQHGEKNLH HLNGSNSSSSASNHSQ
Sbjct: 61  DCSVYGEKSHDLISKQLSIVRAISRVDTFSSNGRLQHGEKNLHGHLNGSNSSSSASNHSQ 120

Query: 121 SFEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR 180
           SFEEFENNNHLRRLVRNGELEEGFKF+E+MV  GDIPDIIACTSLIRGLCKTGKTRKATR
Sbjct: 121 SFEEFENNNHLRRLVRNGELEEGFKFVENMVCHGDIPDIIACTSLIRGLCKTGKTRKATR 180

Query: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240
           VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG
Sbjct: 181 VMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSG 240

Query: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYN 300
           KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEM++KGCKPDVVT+N
Sbjct: 241 KLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMKNKGCKPDVVTFN 300

Query: 301 VLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360
           VLINGICKEGRLDEAIKFLN+MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK
Sbjct: 301 VLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRK 360

Query: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420
           GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA
Sbjct: 361 GCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRA 420

Query: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDG 480
           IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS+KGCSPVLITYNTVIDG
Sbjct: 421 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSAKGCSPVLITYNTVIDG 480

Query: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPN 540
           LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLV GLSREGKVDEAIAFFHDLEEMGVRPN
Sbjct: 481 LSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVRGLSREGKVDEAIAFFHDLEEMGVRPN 540

Query: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600
           AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN
Sbjct: 541 AITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLN 600

Query: 601 ELCSRGVVKKSSAEQVVVKNSF 619
           ELCSRGVVKKSSAEQVVVKNSF
Sbjct: 601 ELCSRGVVKKSSAEQVVVKNSF 622

BLAST of Lcy01g012050 vs. NCBI nr
Match: XP_008444958.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] >KAA0065076.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1132.9 bits (2929), Expect = 0.0e+00
Identity = 570/619 (92.08%), Postives = 588/619 (94.99%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MD+TLPA+HYTDGFCL HRH+ +NR R+V AK RVSSE NSLRL+VG KGK RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTTKNRDRRVTAKGRVSSETNSLRLHVGEKGKHRFFVIPSY 60

Query: 61  NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNG-SNSSSSASNHSQSFE 120
            S+E          +VRAV RVDTFSSNGRL HGEKNLHTHLNG S+SSSS+SN+SQS E
Sbjct: 61  GSDE---------QLVRAVPRVDTFSSNGRLPHGEKNLHTHLNGSSSSSSSSSNYSQSSE 120

Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
           EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME
Sbjct: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180

Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
           ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240

Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
           QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300

Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
           NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEM+RKGCS
Sbjct: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMIRKGCS 360

Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
           PSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420

Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
           LDIMVSRGCYPDIVTYNTLLTALCKDGKVD+AVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDIAVEILNQLGSKGCSPVLITYNTVIDGLSK 480

Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
           VGKT DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT
Sbjct: 481 VGKTGDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540

Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
           YNSIMLGLCK RQT RAIDFLAYMVARGCKPTEASYMILIEGLAYEGL KEALELL+EL 
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLTKEALELLDELY 600

Query: 601 SRGVVKKSSAEQVVVKNSF 619
           SRGVV+KSSAEQVVVKN+F
Sbjct: 601 SRGVVRKSSAEQVVVKNTF 610

BLAST of Lcy01g012050 vs. NCBI nr
Match: XP_011649703.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652149.1 hypothetical protein Csa_022252 [Cucumis sativus])

HSP 1 Score: 1115.9 bits (2885), Expect = 0.0e+00
Identity = 562/619 (90.79%), Postives = 583/619 (94.18%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MD+TLPA+HYTDGFCL HRH+A+NR R+V AK RVSSE NSLRL+ G KG  RF VIPS 
Sbjct: 1   MDLTLPAKHYTDGFCLFHRHTAKNRDRRVMAKGRVSSETNSLRLHAGEKG--RFFVIPSY 60

Query: 61  NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSA-SNHSQSFE 120
            SEE          +VRAV RVDTFSSNGRL HGEKNLHTHLNGS+SSSS+ SNHSQS E
Sbjct: 61  GSEE---------QLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHSQSSE 120

Query: 121 EFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVME 180
           E ENNNHLRRLVRNGELEEGFKFLEDMV RGDIPDIIACTSLIRGLCKTGKT KATRVME
Sbjct: 121 EVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVME 180

Query: 181 ILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240
           ILEDSGAVPDVITYNVLISGYCK+GEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK
Sbjct: 181 ILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLK 240

Query: 241 QAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300
           +AMEVLDRQ+QRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI
Sbjct: 241 EAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLI 300

Query: 301 NGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCS 360
           NGICKEGRLDEAI+FLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEK LAEM+RKGCS
Sbjct: 301 NGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCS 360

Query: 361 PSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 420
           PSVVTFNILINFLCRKGL+GRAIDVLEKMPQHGCTPNSLSYNPLLH  CK+KKM+RAIEY
Sbjct: 361 PSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEY 420

Query: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 480
           LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL SKGCSPVLITYNTVIDGLSK
Sbjct: 421 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 480

Query: 481 VGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAIT 540
           VGKT+DAIKLLDEMKGKGLKPDIITYS+LVGGLSREGKVDEAIAFFHDLEEMGV+PNAIT
Sbjct: 481 VGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAIT 540

Query: 541 YNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELC 600
           YNSIMLGLCK RQT RAIDFLAYMVARGCKPTE SYMILIEGLAYEGLAKEALELLNELC
Sbjct: 541 YNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELC 600

Query: 601 SRGVVKKSSAEQVVVKNSF 619
           SRGVVKKSSAEQVVVKN+F
Sbjct: 601 SRGVVKKSSAEQVVVKNTF 608

BLAST of Lcy01g012050 vs. NCBI nr
Match: XP_023546483.1 (pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546485.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546486.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo] >XP_023546487.1 pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1063.5 bits (2749), Expect = 6.8e-307
Identity = 534/618 (86.41%), Postives = 564/618 (91.26%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHRHSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPSD 60
           MD+TL A+HYTDGFCL  R S +NRGRKVRA++R + E NS+  +VGGKGK RFLVIPSD
Sbjct: 1   MDITLHAKHYTDGFCLFQRRSTKNRGRKVRAERRATPEINSVSFFVGGKGKPRFLVIPSD 60

Query: 61  NSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGEKNLHTHLNGSNSSSSASNHSQSFEE 120
            SEE         S VRAV +  +       Q GEKNLHTHLNGS+SSS +SNHSQSFEE
Sbjct: 61  CSEE---------SFVRAVLKNPS-------QQGEKNLHTHLNGSSSSSFSSNHSQSFEE 120

Query: 121 FENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEI 180
           FENNNHLRRLVRNGELEEGFKF+E MVYRGDIPD I CTSLIRGLCKTGKTRKA RVMEI
Sbjct: 121 FENNNHLRRLVRNGELEEGFKFIEGMVYRGDIPDAIVCTSLIRGLCKTGKTRKAARVMEI 180

Query: 181 LEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKQ 240
           LEDSGAVPDVITYNVLISGYCKSGEI +AL+LLDRMS+SPDV+TYN ILRTLCDSGKLK+
Sbjct: 181 LEDSGAVPDVITYNVLISGYCKSGEIDNALKLLDRMSISPDVITYNIILRTLCDSGKLKE 240

Query: 241 AMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLIN 300
           AMEVL RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMR+KGCKPDVVTYNVLIN
Sbjct: 241 AMEVLHRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMREKGCKPDVVTYNVLIN 300

Query: 301 GICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSP 360
           GICKEGRLDEAI+FLN M SYGCQPNVITHNIILRSMCSTGRW DAEKLLAEMVRKGCSP
Sbjct: 301 GICKEGRLDEAIEFLNEMSSYGCQPNVITHNIILRSMCSTGRWTDAEKLLAEMVRKGCSP 360

Query: 361 SVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYL 420
           SVVTFNILINFLCRKGLLGRAID+LEKMPQHGCTPNS SYNPLLHGFCKEKKM+RAIEYL
Sbjct: 361 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCTPNSSSYNPLLHGFCKEKKMERAIEYL 420

Query: 421 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKV 480
           DIM SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL +KGCSPVLITYNTVIDGLSK 
Sbjct: 421 DIMASRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGTKGCSPVLITYNTVIDGLSKA 480

Query: 481 GKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNAITY 540
           GKTEDA+KLLDEMK KGLKPDIITYSSLVGGL REGKVDEAIAFFHDLEE+GVRPN ITY
Sbjct: 481 GKTEDAVKLLDEMKEKGLKPDIITYSSLVGGLCREGKVDEAIAFFHDLEEVGVRPNVITY 540

Query: 541 NSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCS 600
           NSIMLGLCKV+QT RAIDFLA MVARGCKP EASYMILIEGLAYEGLAKEALELL+ELCS
Sbjct: 541 NSIMLGLCKVQQTVRAIDFLASMVARGCKPNEASYMILIEGLAYEGLAKEALELLDELCS 600

Query: 601 RGVVKKSSAEQVVVKNSF 619
           RGV+KKSSAE+VV+KNSF
Sbjct: 601 RGVMKKSSAERVVIKNSF 602

BLAST of Lcy01g012050 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 890.2 bits (2299), Expect = 9.6e-259
Identity = 450/618 (72.82%), Postives = 514/618 (83.17%), Query Frame = 0

Query: 1   MDVTLPARHYTDGFCLLHR-HSARNRGRKVRAKQRVSSEANSLRLYVGGKGKSRFLVIPS 60
           MD+ +      +GFCL+ + H    RG K+    R S   +S ++ +G + ++R      
Sbjct: 1   MDLMVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISS-KIPLGSRKRNR------ 60

Query: 61  DNSEEPISSINKQLSIVRAVSRVDTFSSNGRLQHGE--KNLHTHLNGSNSSSSASNHSQS 120
                        L +V A S+V++   NGR Q  E   + +++ NG N   S+ N S +
Sbjct: 61  -------------LVLVSAASKVESSGLNGRAQKFETLSSGYSNSNG-NGHYSSVNSSFA 120

Query: 121 FEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRV 180
            E+ E+NNHLR++VR GELEEGFKFLE+MVY G++PDII CT+LIRG C+ GKTRKA ++
Sbjct: 121 LEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKI 180

Query: 181 MEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGK 240
           +EILE SGAVPDVITYNV+ISGYCK+GEI +AL +LDRMSVSPDVVTYNTILR+LCDSGK
Sbjct: 181 LEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGK 240

Query: 241 LKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 300
           LKQAMEVLDR LQR+CYPDVITYTILIEATC++SGVG AMKLLDEMRD+GC PDVVTYNV
Sbjct: 241 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 300

Query: 301 LINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKG 360
           L+NGICKEGRLDEAIKFLN MPS GCQPNVITHNIILRSMCSTGRWMDAEKLLA+M+RKG
Sbjct: 301 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 360

Query: 361 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAI 420
            SPSVVTFNILINFLCRKGLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAI
Sbjct: 361 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 420

Query: 421 EYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGL 480
           EYL+ MVSRGCYPDIVTYNT+LTALCKDGKV+ AVEILNQLSSKGCSPVLITYNTVIDGL
Sbjct: 421 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 480

Query: 481 SKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRPNA 540
           +K GKT  AIKLLDEM+ K LKPD ITYSSLVGGLSREGKVDEAI FFH+ E MG+RPNA
Sbjct: 481 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 540

Query: 541 ITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNE 600
           +T+NSIMLGLCK RQT RAIDFL +M+ RGCKP E SY ILIEGLAYEG+AKEALELLNE
Sbjct: 541 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNE 597

Query: 601 LCSRGVVKKSSAEQVVVK 616
           LC++G++KKSSAEQV  K
Sbjct: 601 LCNKGLMKKSSAEQVAGK 597

BLAST of Lcy01g012050 vs. TAIR 10
Match: AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 450.7 bits (1158), Expect = 1.9e-126
Identity = 240/566 (42.40%), Postives = 345/566 (60.95%), Query Frame = 0

Query: 62  SEEPISSINKQLSIVRAVSRVDTFSS------NGR--LQHGEKNLH--THLNGSNSSSSA 121
           +++P S+ +  L +    S + TFS+      NGR     G +NL   T  + +  +   
Sbjct: 19  TQKPYSNSSHGLLLSHNRSSLLTFSNSNPNNDNGRSFSSSGARNLQTTTTTDATLPTERR 78

Query: 122 SNHSQS--FEEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTG 181
             HSQS  F + +      R  R+G   E    LE MV +G  PD+I CT LI+G     
Sbjct: 79  QQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR 138

Query: 182 KTRKATRVMEILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYN 241
              KA RVMEILE  G  PDV  YN LI+G+CK   I  A ++LDRM     SPD VTYN
Sbjct: 139 NIPKAVRVMEILEKFGQ-PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYN 198

Query: 242 TILRTLCDSGKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK 301
            ++ +LC  GKL  A++VL++ L   C P VITYTILIEAT  E GV +A+KL+DEM  +
Sbjct: 199 IMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSR 258

Query: 302 GCKPDVVTYNVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDA 361
           G KPD+ TYN +I G+CKEG +D A + + ++   GC+P+VI++NI+LR++ + G+W + 
Sbjct: 259 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 318

Query: 362 EKLLAEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHG 421
           EKL+ +M  + C P+VVT++ILI  LCR G +  A+++L+ M + G TP++ SY+PL+  
Sbjct: 319 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 378

Query: 422 FCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPV 481
           FC+E ++D AIE+L+ M+S GC PDIV YNT+L  LCK+GK D A+EI  +L   GCSP 
Sbjct: 379 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 438

Query: 482 LITYNTVIDGLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFH 541
             +YNT+   L   G    A+ ++ EM   G+ PD ITY+S++  L REG VDEA     
Sbjct: 439 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 498

Query: 542 DLEEMGVRPNAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEG 601
           D+      P+ +TYN ++LG CK  +   AI+ L  MV  GC+P E +Y +LIEG+ + G
Sbjct: 499 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 558

Query: 602 LAKEALELLNELCSRGVVKKSSAEQV 613
              EA+EL N+L     + + S +++
Sbjct: 559 YRAEAMELANDLVRIDAISEYSFKRL 583

BLAST of Lcy01g012050 vs. TAIR 10
Match: AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 350.9 bits (899), Expect = 2.1e-96
Identity = 188/486 (38.68%), Postives = 291/486 (59.88%), Query Frame = 0

Query: 136 LEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVMEILEDSGAVPDVITYNV 195
           L + F  LE +V  G  P++   T L+  LCK  + +KA RV+E++  SG +PD   Y  
Sbjct: 87  LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146

Query: 196 LISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQRE 255
           L++  CK G +G A+QL+++M       + VTYN ++R LC  G L Q+++ ++R +Q+ 
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206

Query: 256 CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAI 315
             P+  TY+ L+EA  KE G  +A+KLLDE+  KG +P++V+YNVL+ G CKEGR D+A+
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266

Query: 316 KFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFNILINFL 375
                +P+ G + NV+++NI+LR +C  GRW +A  LLAEM     +PSVVT+NILIN L
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSL 326

Query: 376 CRKGLLGRAIDVLEKMPQ--HGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYP 435
              G   +A+ VL++M +  H     + SYNP++   CKE K+D  ++ LD M+ R C P
Sbjct: 327 AFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386

Query: 436 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTEDAIKLL 495
           +  TYN + +    + KV  A  I+  LS+K        Y +VI  L + G T  A +LL
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLL 446

Query: 496 DEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEM-GVRPNAITYNSIMLGLCK 555
            EM   G  PD  TYS+L+ GL  EG    A+     +EE    +P    +N+++LGLCK
Sbjct: 447 YEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCK 506

Query: 556 VRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSA 615
           +R+T  A++    MV +   P E +Y IL+EG+A+E   + A E+L+EL  R V+ +++ 
Sbjct: 507 IRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAV 566

BLAST of Lcy01g012050 vs. TAIR 10
Match: AT1G08610.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 345.5 bits (885), Expect = 8.8e-95
Identity = 183/483 (37.89%), Postives = 274/483 (56.73%), Query Frame = 0

Query: 119 EEFENNNHLRRLVRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATRVM 178
           +E  NN  L  L  NG+L +  K +E M     +P   +C++L+RGL +  +  KA  ++
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162

Query: 179 EILEDSGAVPDVITYNVLISGYCKSGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDS 238
            ++  SG VPD ITYN++I   CK G I +AL LL+ MS+S   PDV+TYNT++R + D 
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222

Query: 239 GKLKQAMEVLDRQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 298
           G  +QA+     QLQ  C P +ITYT+L+E  C+  G  +A+++L++M  +GC PD+VTY
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282

Query: 299 NVLINGICKEGRLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVR 358
           N L+N  C+ G L+E    + H+ S+G + N +T+N +L S+CS   W + E++L  M +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342

Query: 359 KGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDR 418
               P+V+T+NILIN LC+  LL RAID   +                            
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQ---------------------------- 402

Query: 419 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVID 478
                  M+ + C PDIVTYNT+L A+ K+G VD A+E+L  L +  C P LITYN+VID
Sbjct: 403 -------MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVID 462

Query: 479 GLSKVGKTEDAIKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHDLEEMGVRP 538
           GL+K G  + A++L  +M   G+ PD IT  SL+ G  R   V+EA     +    G   
Sbjct: 463 GLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGI 522

Query: 539 NAITYNSIMLGLCKVRQTSRAIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELL 598
              TY  ++ GLCK ++   AI+ +  M+  GCKP E  Y  +++G+   G+  EA++L 
Sbjct: 523 RGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAVQLQ 550

BLAST of Lcy01g012050 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 329.7 bits (844), Expect = 5.0e-90
Identity = 167/488 (34.22%), Postives = 276/488 (56.56%), Query Frame = 0

Query: 131 VRNGELEEGFKFLEDMVYRGDIPDIIACTSLIRGLCKTGKTRKATR-VMEILEDSGAVPD 190
           +  G+L+   +  E MV  G     ++   ++ G CK G+   A   + E+    G  PD
Sbjct: 235 IEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 294

Query: 191 VITYNVLISGYCKSGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKQAMEVLD 250
             T+N L++G CK+G +  A++++D M      PDV TYN+++  LC  G++K+A+EVLD
Sbjct: 295 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 354

Query: 251 RQLQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 310
           + + R+C P+ +TY  LI   CKE+ V +A +L   +  KG  PDV T+N LI G+C   
Sbjct: 355 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 414

Query: 311 RLDEAIKFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLAEMVRKGCSPSVVTFN 370
               A++    M S GC+P+  T+N+++ S+CS G+  +A  +L +M   GC+ SV+T+N
Sbjct: 415 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 474

Query: 371 ILINFLCRKGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 430
            LI+  C+      A ++ ++M  HG + NS++YN L+ G CK ++++ A + +D M+  
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534

Query: 431 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTEDA 490
           G  PD  TYN+LLT  C+ G +  A +I+  ++S GC P ++TY T+I GL K G+ E A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594

Query: 491 IKLLDEMKGKGLKPDIITYSSLVGGLSREGKVDEAIAFFHD-LEEMGVRPNAITYNSIML 550
            KLL  ++ KG+      Y+ ++ GL R+ K  EAI  F + LE+    P+A++Y  +  
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654

Query: 551 GLCKVRQTSR-AIDFLAYMVARGCKPTEASYMILIEGLAYEGLAKEALELLNELCSRGVV 610
           GLC      R A+DFL  ++ +G  P  +S  +L EGL    + +  ++L+N +  +   
Sbjct: 655 GLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKARF 714

Query: 611 KKSSAEQV 613
            +     V
Sbjct: 715 SEEEVSMV 722

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q3EDF81.3e-25772.82Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Q9SR002.7e-12542.40Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... [more]
A3KPF82.9e-9538.68Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... [more]
Q9FRS41.2e-9337.89Pentatricopeptide repeat-containing protein At1g08610 OS=Arabidopsis thaliana OX... [more]
Q9LFF17.0e-8934.22Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1BSC20.0e+0094.21pentatricopeptide repeat-containing protein At1g09900 OS=Momordica charantia OX=... [more]
A0A5A7VFH10.0e+0092.08Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BB350.0e+0092.08pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... [more]
A0A6J1HFE32.8e-30685.92pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata... [more]
A0A6J1K4041.5e-30485.76pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita maxima O... [more]
Match NameE-valueIdentityDescription
XP_038886112.10.0e+0094.99pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida][more]
XP_022132179.10.0e+0094.21pentatricopeptide repeat-containing protein At1g09900 [Momordica charantia][more]
XP_008444958.10.0e+0092.08PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] ... [more]
XP_011649703.10.0e+0090.79pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KAE8652... [more]
XP_023546483.16.8e-30786.41pentatricopeptide repeat-containing protein At1g09900-like [Cucurbita pepo subsp... [more]
Match NameE-valueIdentityDescription
AT1G09900.19.6e-25972.82Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT3G04760.11.9e-12642.40Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G79080.12.1e-9638.68Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G08610.18.8e-9537.89Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.15.0e-9034.22Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 65..248
e-value: 7.1E-34
score: 119.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 531..601
e-value: 8.2E-17
score: 63.3
coord: 319..389
e-value: 1.1E-21
score: 79.3
coord: 459..530
e-value: 1.1E-22
score: 82.5
coord: 249..318
e-value: 4.4E-26
score: 93.6
coord: 390..458
e-value: 1.5E-22
score: 82.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 538..572
e-value: 4.0E-7
score: 27.8
coord: 157..190
e-value: 6.3E-5
score: 20.9
coord: 328..362
e-value: 6.4E-9
score: 33.4
coord: 223..257
e-value: 2.6E-6
score: 25.2
coord: 191..217
e-value: 1.9E-7
score: 28.8
coord: 293..327
e-value: 1.6E-10
score: 38.4
coord: 363..396
e-value: 5.3E-8
score: 30.6
coord: 399..432
e-value: 4.7E-9
score: 33.9
coord: 468..502
e-value: 6.2E-11
score: 39.8
coord: 433..465
e-value: 1.2E-8
score: 32.6
coord: 258..292
e-value: 5.4E-7
score: 27.4
coord: 503..537
e-value: 9.0E-8
score: 29.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 130..150
e-value: 0.58
score: 10.5
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 220..269
e-value: 4.6E-14
score: 52.4
coord: 535..583
e-value: 2.5E-12
score: 46.8
coord: 290..339
e-value: 4.3E-18
score: 65.3
coord: 468..513
e-value: 1.7E-15
score: 57.0
coord: 395..444
e-value: 1.3E-15
score: 57.3
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 185..217
e-value: 1.0E-12
score: 47.6
coord: 356..388
e-value: 1.6E-12
score: 46.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 396..430
score: 12.24383
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 466..500
score: 12.83574
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 431..465
score: 13.252269
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 221..255
score: 11.750571
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 291..325
score: 14.293592
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 536..570
score: 11.597113
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..188
score: 10.775016
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..290
score: 12.397287
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 571..605
score: 9.032168
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 501..535
score: 12.92343
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 361..395
score: 12.298636
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..219
score: 11.257313
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 326..360
score: 12.572669
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..119
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 67..615
NoneNo IPR availablePANTHERPTHR47932:SF45OS02G0565400 PROTEINcoord: 67..615

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g012050.1Lcy01g012050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding