Homology
BLAST of Lcy01g012030 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 486.5 bits (1251), Expect = 5.5e-136
Identity = 265/767 (34.55%), Postives = 444/767 (57.89%), Query Frame = 0
Query: 79 LLQECID-SNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKCGVMENARKV------- 138
LLQ+ ++ SN A+++H ++K+G +++ L+NVY+K G +ARK+
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 139 ------------------------FDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEML 198
FD LP+R+ V+WTT+ GY Q A+RV +M+
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 199 QAGAYPTNYTLGIVLNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSK----- 258
+ G PT +TL VL + ++ + +E GK+VH++I+K + + S+ NSL + Y+K
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 259 --------------------------FGCLEFAIRAFQKIKEKNVISWTSVVSACGDNGQ 318
G ++ A+ F+++ E+++++W S++S G
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGY 258
Query: 319 AARSLSFFTEMLSEG-VEPNEYTLTSALSACCVMLTLGLGAQVHSLSIKLGYGSSIPIKN 378
R+L F++ML + + P+ +TL S LSAC + L +G Q+HS + G+ S + N
Sbjct: 259 DLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN 318
Query: 379 SVMYLYLKCGWLIEAQKLFE--GMETLNLITWNAMIAGHAKMMD----------LAADDL 438
+++ +Y +CG + A++L E G + L + + A++ G+ K+ D L D+
Sbjct: 319 ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDV 378
Query: 439 AA----------HKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQ 498
A H S A+N+F+ + G +P+ +T +++LSV SSL +L G+QIH
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS 438
Query: 499 IIKSGVLADVVVGTALVSMYNKCGSIDKAGKAF-LEMPSRTLISWTSMITGFARHGLSQQ 558
+KSG + V V AL++MY K G+I A +AF L R +SWTSMI A+HG +++
Sbjct: 439 AVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEE 498
Query: 559 ALQLFEDMRLAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMI 618
AL+LFE M + G+RP+ +T+VGV SAC+HAGLV++ YF++M+ I P + H+ACM+
Sbjct: 499 ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMV 558
Query: 619 DMYLRLGQVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTE 678
D++ R G ++EA + ++KM EP+ + W L++ CR H N +LG AAE+LL L P+++
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSG 618
Query: 679 TYVALLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAE 738
Y AL N+Y + G+W++ +K+RK MK+ ++ K + +SWI +K KV+ F D +H + E
Sbjct: 619 AYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNE 678
Query: 739 MYNLLETVLDEVKNLGYEP--VEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTAI 757
+Y ++ + DE+K +GY P + +EEE +E++ +HSEKLA+AFGL++ P
Sbjct: 679 IYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILR---HHSEKLAIAFGLISTPDKT 738
BLAST of Lcy01g012030 vs. ExPASy Swiss-Prot
Match:
Q5G1T1 (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=EMB2261 PE=2 SV=1)
HSP 1 Score: 476.5 bits (1225), Expect = 5.7e-133
Identity = 247/694 (35.59%), Postives = 416/694 (59.94%), Query Frame = 0
Query: 76 YIPLLQECIDSNLAAEAEIIHGHIVKTGTHE-DLFVTTFLVNVYAKC-GVMENARKVFDN 135
Y +++ C +S+ + G ++KTG E D+ V L++++ K ENA KVFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 136 LPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVLNACSSLQSIELG 195
+ NVV WT + T +Q P A+R F++M+ +G +TL V +AC+ L+++ LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 196 KQVHAYIIKYHIDFDTSIGNSLSSFYSKF---GCLEFAIRAFQKIKEKNVISWTSVVSAC 255
KQ+H++ I+ + D SL Y+K G ++ + F ++++ +V+SWT++++
Sbjct: 289 KQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 348
Query: 256 GDN-GQAARSLSFFTEMLSEG-VEPNEYTLTSALSACCVMLTLGLGAQVHSLSIKLGYGS 315
N A +++ F+EM+++G VEPN +T +SA AC + +G QV + K G S
Sbjct: 349 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 408
Query: 316 SIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADDLAAHKSG 375
+ + NSV+ +++K + +AQ+ FE + NL+++N + G + ++
Sbjct: 409 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF----------- 468
Query: 376 STALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLADVVVGTAL 435
A + ++ + FTF+S+LS +++ ++ +GEQIH+Q++K G+ + V AL
Sbjct: 469 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 528
Query: 436 VSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGIRPNQ 495
+SMY+KCGSID A + F M +R +ISWTSMITGFA+HG + + L+ F M G++PN+
Sbjct: 529 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 588
Query: 496 VTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQVEEAFDVVK 555
VT+V +LSACSH GLV E +F M + + IKP M+H+ACM+D+ R G + +AF+ +
Sbjct: 589 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 648
Query: 556 KMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMYLSAGRWKD 615
M F+ + ++W + CR H N ELG AA ++L+L P + Y+ L N+Y AG+W++
Sbjct: 649 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 708
Query: 616 VSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVLDEVKNLGY 675
+++R+ MKE L K SWI + +K++ F D +H + ++Y+ L+ ++ E+K GY
Sbjct: 709 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 768
Query: 676 EPVE--YMEVIEEEDEEKVFSSTIY-HSEKLAVAFGLLNLPTAIPIRVVKSITMCRDCHN 735
P + +EEE++E +Y HSEK+AVAFGL++ + P+RV K++ +C DCHN
Sbjct: 769 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHN 828
Query: 736 FIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGF 760
+++IS + GREIV+RD + H F +G CSC +
Sbjct: 829 AMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDY 849
BLAST of Lcy01g012030 vs. ExPASy Swiss-Prot
Match:
Q9ZUW3 (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H60 PE=2 SV=1)
HSP 1 Score: 473.8 bits (1218), Expect = 3.7e-132
Identity = 249/701 (35.52%), Postives = 414/701 (59.06%), Query Frame = 0
Query: 62 LSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKC 121
+ + EGT+ + + L + + +H +VK G + + V+ L+N+Y KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 122 GVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVL 181
G + AR +FD ++VV W ++ +GY N L AL +F M + + V+
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 182 NACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIK-EKNV 241
C++L+ + +Q+H ++KY FD +I +L YSK + A+R F++I NV
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 242 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 301
+SWT+++S N ++ F+EM +GV PNE+T + L+A V+ ++VH+
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQ 422
Query: 302 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 361
+K Y S + +++ Y+K G + EA K+F G++ +++ W+AM+AG+A+ + A
Sbjct: 423 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA- 482
Query: 362 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSL-VALEQGEQIHAQIIKSGVL 421
A+ MF +L + G+KP+ FTFSS+L+VC++ ++ QG+Q H IKS +
Sbjct: 483 ----------AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 542
Query: 422 ADVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDM 481
+ + V +AL++MY K G+I+ A + F + L+SW SMI+G+A+HG + +AL +F++M
Sbjct: 543 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 602
Query: 482 RLAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQ 541
+ ++ + VTF+GV +AC+HAGLV+E YF++M + I P +H +CM+D+Y R GQ
Sbjct: 603 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 662
Query: 542 VEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNM 601
+E+A V++ M IW ++A CR H ELG AAE+++ + P+D+ YV L NM
Sbjct: 663 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 722
Query: 602 YLSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETV 661
Y +G W++ +KVRKLM E + K +SWI +K K YSF D+SH ++Y LE +
Sbjct: 723 YAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDL 782
Query: 662 LDEVKNLGYEPVEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 721
+K+LGYEP + V+++ D+E + HSE+LA+AFGL+ P P+ ++K++ +
Sbjct: 783 STRLKDLGYEP-DTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRV 842
Query: 722 CRDCHNFIRFISLLKGREIVIRDSKQLHKF-LNGYCSCGGF 760
C DCH I+ I+ ++ REIV+RDS + H F +G CSCG F
Sbjct: 843 CGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867
BLAST of Lcy01g012030 vs. ExPASy Swiss-Prot
Match:
Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)
HSP 1 Score: 468.4 bits (1204), Expect = 1.6e-130
Identity = 254/681 (37.30%), Postives = 390/681 (57.27%), Query Frame = 0
Query: 79 LLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKCGVMENARKVFDNLPRRN 138
LL+ C D + IHG +VK+G DLF T L N+YAKC + ARKVFD +P R+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 139 VVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVLNACSSLQSIELGKQVHA 198
+V+W T+ GY QN AL + M + P+ T+ VL A S+L+ I +GK++H
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 199 YIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNVISWTSVVSACGDNGQAAR 258
Y ++ D +I +L Y+K G LE A + F + E+NV+SW S++ A N
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 259 SLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSLSIKLGYGSSIPIKNSVMY 318
++ F +ML EGV+P + ++ AL AC + L G +H LS++LG ++ + NS++
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 319 LYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADDLAAHKSGSTALNMFQKL 378
+Y KC + A +F +++ L++WNAMI G A+ + ALN F ++
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ-----------NGRPIDALNYFSQM 440
Query: 379 HRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLADVVVGTALVSMYNKCGSI 438
+KPD FT+ SV++ + L + IH +++S + +V V TALV MY KCG+I
Sbjct: 441 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 500
Query: 439 DKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGIRPNQVTFVGVLSAC 498
A F M R + +W +MI G+ HG + AL+LFE+M+ I+PN VTF+ V+SAC
Sbjct: 501 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 560
Query: 499 SHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQVEEAFDVVKKMNFEPNEII 558
SH+GLV+ L F +M++ Y+I+ MDH+ M+D+ R G++ EA+D + +M +P +
Sbjct: 561 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 620
Query: 559 WSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMYLSAGRWKDVSKVRKLMKE 618
+ ++ C+ H N AAE+L +L P D +V L N+Y +A W+ V +VR M
Sbjct: 621 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 680
Query: 619 EKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVLDEVKNLGYEPVEYMEVIE 678
+ L K S + IK +V+SF +H S ++Y LE ++ +K GY P + +
Sbjct: 681 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGV 740
Query: 679 EEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITMCRDCHNFIRFISLLKGREI 738
E D ++ ST HSEKLA++FGLLN I V K++ +C DCHN ++ISL+ GREI
Sbjct: 741 ENDVKEQLLST--HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREI 800
Query: 739 VIRDSKQLHKFLNGYCSCGGF 760
V+RD ++ H F NG CSCG +
Sbjct: 801 VVRDMQRFHHFKNGACSCGDY 808
BLAST of Lcy01g012030 vs. ExPASy Swiss-Prot
Match:
Q9SMZ2 (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 461.1 bits (1185), Expect = 2.5e-128
Identity = 239/685 (34.89%), Postives = 401/685 (58.54%), Query Frame = 0
Query: 76 YIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKCGVMENARKVFDNLP 135
+I +L + + A + +H +K G L V+ L+N+Y K AR VFDN+
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 136 RRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVLNACSSL-QSIELGK 195
R++++W ++ G QN + A+ +F+++L+ G P YT+ VL A SSL + + L K
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437
Query: 196 QVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNVISWTSVVSACGDNG 255
QVH + IK + D+ + +L YS+ C++ A F++ ++++W ++++ +
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSH 497
Query: 256 QAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSLSIKLGYGSSIPIKN 315
++L F M +G +++TL + C + + G QVH+ +IK GY + + +
Sbjct: 498 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 557
Query: 316 SVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADDLAAHKSGSTALNM 375
++ +Y+KCG + AQ F+ + + + W MI+G ++ ++ A H +
Sbjct: 558 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG---CIENGEEERAFH--------V 617
Query: 376 FQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLADVVVGTALVSMYNK 435
F ++ G+ PD FT +++ S L ALEQG QIHA +K D VGT+LV MY K
Sbjct: 618 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 677
Query: 436 CGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGIRPNQVTFVGV 495
CGSID A F + + +W +M+ G A+HG ++ LQLF+ M+ GI+P++VTF+GV
Sbjct: 678 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 737
Query: 496 LSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQVEEAFDVVKKMNFEP 555
LSACSH+GLV EA + M Y IKP ++H++C+ D R G V++A ++++ M+ E
Sbjct: 738 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 797
Query: 556 NEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMYLSAGRWKDVSKVRK 615
+ ++ L+A CR G+ E G A +LL+L P D+ YV L NMY +A +W ++ R
Sbjct: 798 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 857
Query: 616 LMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVLDEVKNLGYEPVEYM 675
+MK K+ K +SWI +K K++ F +D+S+ Q+ +Y ++ ++ ++K GY P
Sbjct: 858 MMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDF 917
Query: 676 EVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITMCRDCHNFIRFISLLK 735
+++ E+EEK + YHSEKLAVAFGLL+ P + PIRV+K++ +C DCHN +++I+ +
Sbjct: 918 TLVDVEEEEKE-RALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVY 977
Query: 736 GREIVIRDSKQLHKFLNGYCSCGGF 760
REIV+RD+ + H+F +G CSCG +
Sbjct: 978 NREIVLRDANRFHRFKDGICSCGDY 989
BLAST of Lcy01g012030 vs. ExPASy TrEMBL
Match:
A0A6J1BQL4 (putative pentatricopeptide repeat-containing protein At5g52630 OS=Momordica charantia OX=3673 GN=LOC111004719 PE=3 SV=1)
HSP 1 Score: 1411.4 bits (3652), Expect = 0.0e+00
Identity = 707/762 (92.78%), Postives = 733/762 (96.19%), Query Frame = 0
Query: 2 ASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLREA 61
ASLPS + A L+LE D+R RHS+SFLV DKS V YQKNQSLI+LNVDAE +FVDLREA
Sbjct: 3 ASLPSPAIAATLKLEPDLRNRHSSSFLVADKSGSVPYQKNQSLIRLNVDAEPRFVDLREA 62
Query: 62 LSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKC 121
LSLL+EGTRIETSYYIPLLQECI SNLAAEAE+IHGHI+KTGTHEDLFVTTFLVNVYAKC
Sbjct: 63 LSLLKEGTRIETSYYIPLLQECIVSNLAAEAEVIHGHIIKTGTHEDLFVTTFLVNVYAKC 122
Query: 122 GVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVL 181
GVME+ARKVFDNLPRRNVVAWTTL TGYVQNSQP+AALRVFIEMLQAGAYPTNYTLGIVL
Sbjct: 123 GVMEHARKVFDNLPRRNVVAWTTLVTGYVQNSQPVAALRVFIEMLQAGAYPTNYTLGIVL 182
Query: 182 NACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNVI 241
NACSSLQSIELGKQVH YIIKYHIDFDTSIGNSLSSFYSKFG L+FAIRAFQKI+EKNVI
Sbjct: 183 NACSSLQSIELGKQVHGYIIKYHIDFDTSIGNSLSSFYSKFGSLDFAIRAFQKIEEKNVI 242
Query: 242 SWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSLS 301
SWTSVVSACGDNGQAA+SLSFFTEML EGVEPNEYTLTSALSACCVML L LGAQ+HSLS
Sbjct: 243 SWTSVVSACGDNGQAAQSLSFFTEMLEEGVEPNEYTLTSALSACCVMLALALGAQIHSLS 302
Query: 302 IKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADD 361
IKLGYGSSIP+KNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADD
Sbjct: 303 IKLGYGSSIPVKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADD 362
Query: 362 LAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLAD 421
LAAHKSGSTAL MFQKL+RSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLAD
Sbjct: 363 LAAHKSGSTALEMFQKLYRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLAD 422
Query: 422 VVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRL 481
VVVGT+LVSMYNKCGSIDKA KAFLEMP RTLISWTSMITGFARHGLSQQALQLFEDMRL
Sbjct: 423 VVVGTSLVSMYNKCGSIDKASKAFLEMPLRTLISWTSMITGFARHGLSQQALQLFEDMRL 482
Query: 482 AGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQVE 541
AG+RPNQVTFVGVLSACSHAGLVDEALYYFEVM KQYNIKPVMDHFAC++DMYLRLG+VE
Sbjct: 483 AGVRPNQVTFVGVLSACSHAGLVDEALYYFEVMLKQYNIKPVMDHFACLMDMYLRLGRVE 542
Query: 542 EAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMYL 601
EAFDVVKKM+FEPNEIIWSMLIAGCRSHGN+ELGFYAAEQLLKL PKDTE YV+LLNMYL
Sbjct: 543 EAFDVVKKMSFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTEIYVSLLNMYL 602
Query: 602 SAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVLD 661
S GRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSH QSAEMYNLLE VLD
Sbjct: 603 SEGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHSQSAEMYNLLENVLD 662
Query: 662 EVKNLGYEPVEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITMCR 721
EVKNLGYEPVEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTA PIRVVKSITMCR
Sbjct: 663 EVKNLGYEPVEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTATPIRVVKSITMCR 722
Query: 722 DCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDLL 764
DCHNFIRFISLLKGREIVIRDSKQLHKFLNG CSCGGFGDL+
Sbjct: 723 DCHNFIRFISLLKGREIVIRDSKQLHKFLNGCCSCGGFGDLI 764
BLAST of Lcy01g012030 vs. ExPASy TrEMBL
Match:
A0A6J1KJZ5 (pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima OX=3661 GN=LOC111495952 PE=3 SV=1)
HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 687/764 (89.92%), Postives = 724/764 (94.76%), Query Frame = 0
Query: 1 MASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLRE 60
MASLPSVTLTAAL L+SDVRKRHSTS L+ DKSA V YQKNQSLIQLNVDAE KFVD+RE
Sbjct: 1 MASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVRE 60
Query: 61 ALSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAK 120
ALSLL+EGT ++TSYY+PLLQEC+D LAAEAEIIHGHIVKTGTHEDLFV T LVNVYAK
Sbjct: 61 ALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAK 120
Query: 121 CGVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIV 180
CGV+E ARKVFDNLPRRNVVAWTTL TGYVQNSQPL AL+VFIEMLQAGAYPTN+TLGIV
Sbjct: 121 CGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIV 180
Query: 181 LNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNV 240
LNACSSLQSIELGKQVHAYIIKYH+DFDTSIGNSLSSFYSKFGCLE AIRAFQKIKEKNV
Sbjct: 181 LNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNV 240
Query: 241 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 300
ISWTSVVSACGDNGQAARSL FFT+MLSEGVEPNEYTLTS LS CCVMLTL LGAQ+HSL
Sbjct: 241 ISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSL 300
Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 360
SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWN+MIAGHAKMMD A D
Sbjct: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAED 360
Query: 361 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLA 420
DLAAHKSGSTALNMFQKLH SG+KPDLFTFSSVLSVCS LVALEQGEQ HAQIIKSGVLA
Sbjct: 361 DLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLA 420
Query: 421 DVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
D+VVGTAL+SMYNKCGSI +A KAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR
Sbjct: 421 DIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
Query: 481 LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQV 540
LAG++PNQ+TFVGVLSACSHAGLVDEALYYFEVMQKQ I+PVMDHFACMIDMY+RLG+V
Sbjct: 481 LAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRV 540
Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMY 600
EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGN+ELGFYAAEQLLKL PKDTE+Y++LLNMY
Sbjct: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMY 600
Query: 601 LSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVL 660
+SAGRWKDVS VRKLMKEEK+GKLKDWSWISIKEKVYSFKPNDKSHCQ+AEMY LLET+L
Sbjct: 601 ISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLL 660
Query: 661 DEVKNLGYEPVEYMEVIEEE-DEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 720
DEVK LGYEPV+YMEVIEEE +E VFSSTIYHSEKLAVAFGLLNLP A IRVVK+ITM
Sbjct: 661 DEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITM 720
Query: 721 CRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDLL 764
CRDCHNFIRF+SLL GREIVIRDSKQLHKF NGYCSCGGFGDLL
Sbjct: 721 CRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 764
BLAST of Lcy01g012030 vs. ExPASy TrEMBL
Match:
A0A6J1GH28 (putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucurbita moschata OX=3662 GN=LOC111454156 PE=3 SV=1)
HSP 1 Score: 1347.0 bits (3485), Expect = 0.0e+00
Identity = 673/764 (88.09%), Postives = 710/764 (92.93%), Query Frame = 0
Query: 1 MASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLRE 60
MASLPSVT TA L L+SDVRKRHSTS L+ DK A V QKNQSLIQLNVDAE KFVD RE
Sbjct: 1 MASLPSVTFTAPLNLDSDVRKRHSTSLLLKDKGASVPNQKNQSLIQLNVDAEPKFVDFRE 60
Query: 61 ALSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAK 120
ALSLL+EGT ++TSYY+PLLQECID LAAEAEIIHGHIVKTGTHEDLFV T LVNVYAK
Sbjct: 61 ALSLLKEGTTVKTSYYVPLLQECIDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAK 120
Query: 121 CGVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIV 180
CGVME+ARKVFDNLPRRNVV WTTL TGYVQNSQPL AL+VFIEMLQAGAYPTN+TLGIV
Sbjct: 121 CGVMEHARKVFDNLPRRNVVGWTTLVTGYVQNSQPLVALKVFIEMLQAGAYPTNFTLGIV 180
Query: 181 LNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNV 240
LNACSSLQS+ELGKQVHAYIIKYH+DFDTSIGNSLSSFYSKFGCLE AIRAFQKIKEKNV
Sbjct: 181 LNACSSLQSMELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNV 240
Query: 241 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 300
ISWTSVVSACGDNGQAARSL+FFTEMLSEGVEPNEYT S LS CCVM TL LGAQ+HSL
Sbjct: 241 ISWTSVVSACGDNGQAARSLNFFTEMLSEGVEPNEYTFASVLSTCCVMQTLSLGAQIHSL 300
Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 360
SIKLGYGSSIPI +SVMYLYLKCGWLIEAQK+FEGMET NLITWN+MIAGHAKMMD A D
Sbjct: 301 SIKLGYGSSIPINSSVMYLYLKCGWLIEAQKVFEGMETPNLITWNSMIAGHAKMMDAAED 360
Query: 361 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLA 420
DLAAHKSGSTALNMFQKL+ SG+KPDLFTFSSVLSVCS LVALEQGEQ+HAQIIKSGVLA
Sbjct: 361 DLAAHKSGSTALNMFQKLYHSGIKPDLFTFSSVLSVCSRLVALEQGEQVHAQIIKSGVLA 420
Query: 421 DVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
DVVVGTALVSMYNKCGSID+A KAFLEMPSRTLISWTSMITG A+HGLSQQAL++FEDMR
Sbjct: 421 DVVVGTALVSMYNKCGSIDEASKAFLEMPSRTLISWTSMITGLAQHGLSQQALRVFEDMR 480
Query: 481 LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQV 540
LAG+ PN++TFVGVLSACSH GLVDEALYYFEVMQKQY I+PVMDHFACMIDMY+RLG+V
Sbjct: 481 LAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRV 540
Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMY 600
EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGN+ELGFY+AEQLLKL PKD ETYV+LLNMY
Sbjct: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYSAEQLLKLRPKDAETYVSLLNMY 600
Query: 601 LSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVL 660
+SAGRWKDVSKVRKLM EEKLGKLKDWSWISIKEKVYSFKPNDKSH Q+ EMY LLET+L
Sbjct: 601 ISAGRWKDVSKVRKLMTEEKLGKLKDWSWISIKEKVYSFKPNDKSHHQTTEMYELLETLL 660
Query: 661 DEVKNLGYEPVEYMEVIEEED-EEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 720
DEVK LGYEPV+Y E IEEE+ EE VFSSTIYHSEKLAVAF LLNLPTA PIRVVKSITM
Sbjct: 661 DEVKPLGYEPVQYTEAIEEENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITM 720
Query: 721 CRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDLL 764
CRDCHNFIRFISLL GREIVIRD KQLHKF NGYCSC GFGDLL
Sbjct: 721 CRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL 764
BLAST of Lcy01g012030 vs. ExPASy TrEMBL
Match:
A0A6J1KHZ4 (putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucurbita maxima OX=3661 GN=LOC111495953 PE=3 SV=1)
HSP 1 Score: 1337.0 bits (3459), Expect = 0.0e+00
Identity = 668/764 (87.43%), Postives = 708/764 (92.67%), Query Frame = 0
Query: 1 MASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLRE 60
MASLPSVT TA L L+SDVRKRHSTS L+ DKSA V QKNQSLIQLNVDA+ KFVD RE
Sbjct: 1 MASLPSVTFTAPLNLDSDVRKRHSTSLLLKDKSASVPSQKNQSLIQLNVDADPKFVDFRE 60
Query: 61 ALSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAK 120
ALSLL+EGT ++TSYY+ LLQECID LAAEAEIIHGHIVKTGTHEDLFV T LVNVYAK
Sbjct: 61 ALSLLKEGTTVKTSYYVSLLQECIDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAK 120
Query: 121 CGVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIV 180
CGVME+ARKVFDNLPRRNVVAWTTL TGYVQNSQPL AL+VFIEMLQAGAYPTN+TLGIV
Sbjct: 121 CGVMEHARKVFDNLPRRNVVAWTTLVTGYVQNSQPLVALKVFIEMLQAGAYPTNFTLGIV 180
Query: 181 LNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNV 240
LNACSSLQS+ELGKQVHAYIIKYH+DFDTSIGNSLSSFYSKFGCLE AIRAFQKIKEKNV
Sbjct: 181 LNACSSLQSMELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNV 240
Query: 241 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 300
ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYT S LS CC+M TL LGAQ+HSL
Sbjct: 241 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTFASVLSTCCMMQTLSLGAQIHSL 300
Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 360
SIKLGYGSSIPI +SVMYLYLKCGWLIEAQKLFE MET NLITWN+MIAGHAKMMD D
Sbjct: 301 SIKLGYGSSIPINSSVMYLYLKCGWLIEAQKLFEDMETPNLITWNSMIAGHAKMMDATED 360
Query: 361 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLA 420
DLAAHKSGSTALNMFQKL+ SG+KPDLFTFSSVLSVCS LVALEQGEQ+HAQIIKSGVLA
Sbjct: 361 DLAAHKSGSTALNMFQKLYHSGIKPDLFTFSSVLSVCSRLVALEQGEQVHAQIIKSGVLA 420
Query: 421 DVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
DVVVGTALVSMYNKCGSID+A KAFLEMPSRTLISWTSMITG A+HGLSQQAL++FEDMR
Sbjct: 421 DVVVGTALVSMYNKCGSIDEASKAFLEMPSRTLISWTSMITGLAQHGLSQQALRVFEDMR 480
Query: 481 LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQV 540
LAG+ PN++TFVGVLSACSH G VDEALYYFEVMQKQY I+PVMDHFACMIDMY+RLG+V
Sbjct: 481 LAGVEPNKITFVGVLSACSHGGSVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRV 540
Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMY 600
EEAFDVVKKMNFE NE+IWSM+IAGCRSHGN+ELGFYAA+QLLKL PKDTETYV+LLNMY
Sbjct: 541 EEAFDVVKKMNFEANEVIWSMIIAGCRSHGNSELGFYAADQLLKLRPKDTETYVSLLNMY 600
Query: 601 LSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVL 660
+SAGRWKDVSKVRKLM EEKLGKLKDWSWI+IKEKVYSFKP DKSH Q+AEMY LLET+L
Sbjct: 601 ISAGRWKDVSKVRKLMTEEKLGKLKDWSWITIKEKVYSFKPKDKSHYQTAEMYELLETLL 660
Query: 661 DEVKNLGYEPVEYMEVIEEE-DEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 720
DEVK LGYEPV+YME+ EEE EE FSSTIYHSEKLAVAFGLLNLPTA PIRVVKSITM
Sbjct: 661 DEVKPLGYEPVQYMELTEEEKGEETAFSSTIYHSEKLAVAFGLLNLPTATPIRVVKSITM 720
Query: 721 CRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDLL 764
CRDCHNFIRFISLL GREIVIRD KQLHKF NGYCSC GFGDLL
Sbjct: 721 CRDCHNFIRFISLLTGREIVIRDRKQLHKFSNGYCSCRGFGDLL 764
BLAST of Lcy01g012030 vs. ExPASy TrEMBL
Match:
A0A1S3BBK8 (putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucumis melo OX=3656 GN=LOC103488145 PE=3 SV=1)
HSP 1 Score: 1293.5 bits (3346), Expect = 0.0e+00
Identity = 651/764 (85.21%), Postives = 696/764 (91.10%), Query Frame = 0
Query: 1 MASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLRE 60
MAS PSV+LTAAL LE RKRHSTS +NDK V +QKN SLIQLNV VD E
Sbjct: 1 MASFPSVSLTAALNLEPHPRKRHSTSCPLNDKDKSVGFQKNHSLIQLNV------VDAEE 60
Query: 61 ALSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAK 120
+ GTRIE+SYY PLLQECID NLA EA +IHGHIVKTG HEDLFV TFLVNVY+K
Sbjct: 61 P----KLGTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSK 120
Query: 121 CGVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIV 180
CGVME+A KVFDNLPRRNV+AWTTL TGYVQNS PL AL++FI+ML+AGAYP+NYTLGIV
Sbjct: 121 CGVMESAHKVFDNLPRRNVIAWTTLLTGYVQNSHPLLALQLFIQMLEAGAYPSNYTLGIV 180
Query: 181 LNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNV 240
LNACSSLQSIE GKQVHAYIIKYHIDFDTSIGNSLSSFYSKF LEFAIRAFQKIKEK+V
Sbjct: 181 LNACSSLQSIEFGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFRSLEFAIRAFQKIKEKDV 240
Query: 241 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 300
ISWTS +S+C DNGQAARSLSFF +ML +GVEPNEYTL S LSACCV LTL LGAQ+HSL
Sbjct: 241 ISWTSAISSCCDNGQAARSLSFFIDMLLDGVEPNEYTLASVLSACCVKLTLDLGAQIHSL 300
Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 360
SIKLGYGSSI IKNS+MYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLA D
Sbjct: 301 SIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAED 360
Query: 361 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLA 420
D+AAHKSGSTAL MFQKL+RSGMKPDLFTFSSVLSVCS+LVALEQGEQIH QIIKSGVLA
Sbjct: 361 DIAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLA 420
Query: 421 DVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
DVVVGTALVSMYNKCGSIDKA KAFLEMPSRT+ISWTSMITGFARHGLSQQALQLFEDMR
Sbjct: 421 DVVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMR 480
Query: 481 LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQV 540
L GI+PNQVTFVGVLSACSHAGL DEALYYFE+MQKQYNIKPVMDHFAC+IDMYLRLG+V
Sbjct: 481 LVGIKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRV 540
Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMY 600
EEAFDVV+KMNFEPNE IWSMLIAGCRSHG ++LGFYAAEQLLKL PKD ETYV+LLNM+
Sbjct: 541 EEAFDVVQKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMH 600
Query: 601 LSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVL 660
+SAGRWK+VSKVRKLMKEEK+GKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETV
Sbjct: 601 VSAGRWKEVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVF 660
Query: 661 DEVKNLGYEPVEYMEVIE-EEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 720
+EVK LGYEPVE +E+IE EEDE KV S TI+HSEKLA+AFGLLNLPTA PIRVVKSITM
Sbjct: 661 NEVKALGYEPVEDVELIEKEEDEGKVLSPTIHHSEKLAIAFGLLNLPTATPIRVVKSITM 720
Query: 721 CRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDLL 764
CRDCH FIRF+SLLKGRE+VIRDSKQLHKFLNGYCSCGG+GD L
Sbjct: 721 CRDCHKFIRFVSLLKGREVVIRDSKQLHKFLNGYCSCGGYGDYL 754
BLAST of Lcy01g012030 vs. NCBI nr
Match:
XP_022131569.1 (putative pentatricopeptide repeat-containing protein At5g52630 [Momordica charantia])
HSP 1 Score: 1411.4 bits (3652), Expect = 0.0e+00
Identity = 707/762 (92.78%), Postives = 733/762 (96.19%), Query Frame = 0
Query: 2 ASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLREA 61
ASLPS + A L+LE D+R RHS+SFLV DKS V YQKNQSLI+LNVDAE +FVDLREA
Sbjct: 3 ASLPSPAIAATLKLEPDLRNRHSSSFLVADKSGSVPYQKNQSLIRLNVDAEPRFVDLREA 62
Query: 62 LSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKC 121
LSLL+EGTRIETSYYIPLLQECI SNLAAEAE+IHGHI+KTGTHEDLFVTTFLVNVYAKC
Sbjct: 63 LSLLKEGTRIETSYYIPLLQECIVSNLAAEAEVIHGHIIKTGTHEDLFVTTFLVNVYAKC 122
Query: 122 GVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVL 181
GVME+ARKVFDNLPRRNVVAWTTL TGYVQNSQP+AALRVFIEMLQAGAYPTNYTLGIVL
Sbjct: 123 GVMEHARKVFDNLPRRNVVAWTTLVTGYVQNSQPVAALRVFIEMLQAGAYPTNYTLGIVL 182
Query: 182 NACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNVI 241
NACSSLQSIELGKQVH YIIKYHIDFDTSIGNSLSSFYSKFG L+FAIRAFQKI+EKNVI
Sbjct: 183 NACSSLQSIELGKQVHGYIIKYHIDFDTSIGNSLSSFYSKFGSLDFAIRAFQKIEEKNVI 242
Query: 242 SWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSLS 301
SWTSVVSACGDNGQAA+SLSFFTEML EGVEPNEYTLTSALSACCVML L LGAQ+HSLS
Sbjct: 243 SWTSVVSACGDNGQAAQSLSFFTEMLEEGVEPNEYTLTSALSACCVMLALALGAQIHSLS 302
Query: 302 IKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADD 361
IKLGYGSSIP+KNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADD
Sbjct: 303 IKLGYGSSIPVKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADD 362
Query: 362 LAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLAD 421
LAAHKSGSTAL MFQKL+RSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLAD
Sbjct: 363 LAAHKSGSTALEMFQKLYRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLAD 422
Query: 422 VVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRL 481
VVVGT+LVSMYNKCGSIDKA KAFLEMP RTLISWTSMITGFARHGLSQQALQLFEDMRL
Sbjct: 423 VVVGTSLVSMYNKCGSIDKASKAFLEMPLRTLISWTSMITGFARHGLSQQALQLFEDMRL 482
Query: 482 AGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQVE 541
AG+RPNQVTFVGVLSACSHAGLVDEALYYFEVM KQYNIKPVMDHFAC++DMYLRLG+VE
Sbjct: 483 AGVRPNQVTFVGVLSACSHAGLVDEALYYFEVMLKQYNIKPVMDHFACLMDMYLRLGRVE 542
Query: 542 EAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMYL 601
EAFDVVKKM+FEPNEIIWSMLIAGCRSHGN+ELGFYAAEQLLKL PKDTE YV+LLNMYL
Sbjct: 543 EAFDVVKKMSFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTEIYVSLLNMYL 602
Query: 602 SAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVLD 661
S GRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSH QSAEMYNLLE VLD
Sbjct: 603 SEGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHSQSAEMYNLLENVLD 662
Query: 662 EVKNLGYEPVEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITMCR 721
EVKNLGYEPVEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTA PIRVVKSITMCR
Sbjct: 663 EVKNLGYEPVEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTATPIRVVKSITMCR 722
Query: 722 DCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDLL 764
DCHNFIRFISLLKGREIVIRDSKQLHKFLNG CSCGGFGDL+
Sbjct: 723 DCHNFIRFISLLKGREIVIRDSKQLHKFLNGCCSCGGFGDLI 764
BLAST of Lcy01g012030 vs. NCBI nr
Match:
XP_038885496.1 (putative pentatricopeptide repeat-containing protein At5g52630 [Benincasa hispida])
HSP 1 Score: 1383.6 bits (3580), Expect = 0.0e+00
Identity = 697/763 (91.35%), Postives = 727/763 (95.28%), Query Frame = 0
Query: 1 MASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLRE 60
MAS PSVTLTA+L+LE D RKRH TSF +NDKS + YQKN SLIQLNVDAESKFVDLRE
Sbjct: 1 MASFPSVTLTASLKLEPDSRKRHYTSFPLNDKS--LPYQKNHSLIQLNVDAESKFVDLRE 60
Query: 61 ALSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAK 120
ALSLL++GTRIETSYYIPLLQECID NLAAEAEIIHGH+VKTGTHEDLFV TFLVNVYAK
Sbjct: 61 ALSLLKDGTRIETSYYIPLLQECIDGNLAAEAEIIHGHVVKTGTHEDLFVMTFLVNVYAK 120
Query: 121 CGVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIV 180
CGVME ARKVFDNLPRRNV+AWTTL TGYVQNSQPL A +VFIEML+AGAYPTNYTLGIV
Sbjct: 121 CGVMEIARKVFDNLPRRNVIAWTTLVTGYVQNSQPLVAFQVFIEMLEAGAYPTNYTLGIV 180
Query: 181 LNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNV 240
LNAC SL SIE GKQVHAYIIKYHIDFDTSIGNSLS+FYSK G LEFAIRAF+KIK+KNV
Sbjct: 181 LNACCSLHSIEFGKQVHAYIIKYHIDFDTSIGNSLSNFYSKSGSLEFAIRAFKKIKKKNV 240
Query: 241 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 300
ISWTSVVS+C DNGQAARSLSFF EMLS+ VEPNEYTLTS LSACCVMLTLGLGAQ+HSL
Sbjct: 241 ISWTSVVSSCCDNGQAARSLSFFFEMLSDDVEPNEYTLTSVLSACCVMLTLGLGAQIHSL 300
Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 360
SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFE METLNLITWNAMIAGHAKMMDLAAD
Sbjct: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFESMETLNLITWNAMIAGHAKMMDLAAD 360
Query: 361 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLA 420
DLAAHKSG TAL MFQKL+RSGMKPDLFTFSSVLSVCS+LVALEQGEQIHAQIIKSGVLA
Sbjct: 361 DLAAHKSGFTALTMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHAQIIKSGVLA 420
Query: 421 DVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
DVVVGTALVSMYNKCGS D+A KAFLEMPSRTLISWTSMITGFARH LSQQALQLFEDMR
Sbjct: 421 DVVVGTALVSMYNKCGSTDRASKAFLEMPSRTLISWTSMITGFARHSLSQQALQLFEDMR 480
Query: 481 LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQV 540
LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFAC+IDMYLRLG+V
Sbjct: 481 LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACLIDMYLRLGRV 540
Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMY 600
EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGN+ELGFYAAEQLLKL PKDT+TYV+LLNMY
Sbjct: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLKPKDTKTYVSLLNMY 600
Query: 601 LSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVL 660
LSAGRWKDVSKVRKLMKEEK+GKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLET+L
Sbjct: 601 LSAGRWKDVSKVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETIL 660
Query: 661 DEVKNLGYEPVEYMEVI-EEEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 720
+EVK LGYEPVE+MEVI EEEDEEKVFSSTI+HSEKLAV FGLLNLPTA IRVVKSITM
Sbjct: 661 NEVKTLGYEPVEHMEVIEEEEDEEKVFSSTIHHSEKLAVTFGLLNLPTATTIRVVKSITM 720
Query: 721 CRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDL 763
CRDCHNFIRFISLLKGREI+IRDSKQLHKFLNGYCSCGGFGDL
Sbjct: 721 CRDCHNFIRFISLLKGREIIIRDSKQLHKFLNGYCSCGGFGDL 761
BLAST of Lcy01g012030 vs. NCBI nr
Match:
XP_023538358.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo] >XP_023538359.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1382.1 bits (3576), Expect = 0.0e+00
Identity = 688/764 (90.05%), Postives = 725/764 (94.90%), Query Frame = 0
Query: 1 MASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLRE 60
MASLPSVTLTAAL L+SDVRKRHSTS L+ DK+A V YQKN SLIQLNVDAE KFVD+RE
Sbjct: 1 MASLPSVTLTAALNLDSDVRKRHSTSLLLKDKNASVSYQKNHSLIQLNVDAEPKFVDVRE 60
Query: 61 ALSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAK 120
ALSLL+EGT ++TSYY+PLLQECID LAAEAEIIHGHIVKTGTHEDLFV T LVNVYAK
Sbjct: 61 ALSLLKEGTTVKTSYYVPLLQECIDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAK 120
Query: 121 CGVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIV 180
CGVME ARKVFDNLPRRNV+AWTTL TGYVQNSQPL AL+VFIEMLQAGAYPTN+TLGIV
Sbjct: 121 CGVMEKARKVFDNLPRRNVIAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIV 180
Query: 181 LNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNV 240
LNACSSLQSIELGKQVHAYIIKYH+DFDTSIGNSLSSFYSKFGCLE AIRAFQKIKEKNV
Sbjct: 181 LNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNV 240
Query: 241 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 300
ISWTSVVSACGDNGQAARSLSFFT+MLSEGVEPNEYTLTS LS CCVMLTL LGAQ+HSL
Sbjct: 241 ISWTSVVSACGDNGQAARSLSFFTKMLSEGVEPNEYTLTSILSTCCVMLTLSLGAQIHSL 300
Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 360
SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWN+MIAGHAKMMD A D
Sbjct: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAED 360
Query: 361 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLA 420
DLAAHKSGSTALNMFQKLHRSG+KPDLFTFSSVLS+CS LVALEQGEQ HAQIIKSGVLA
Sbjct: 361 DLAAHKSGSTALNMFQKLHRSGIKPDLFTFSSVLSICSRLVALEQGEQTHAQIIKSGVLA 420
Query: 421 DVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
DVVVGTAL+SMYNKCGSI +A KAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR
Sbjct: 421 DVVVGTALISMYNKCGSIAEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
Query: 481 LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQV 540
LAG++PNQ+TFVGVLSACSHAGLVDEALYYFEVMQKQY I+PVMDHFACMIDMY+RLG+V
Sbjct: 481 LAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRV 540
Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMY 600
EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGN+ELGFYAAEQLLKL PKDTETY++LLNMY
Sbjct: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTETYISLLNMY 600
Query: 601 LSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVL 660
+SAGRWKDVS VRK+MKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQ+AEMY LLET+L
Sbjct: 601 ISAGRWKDVSTVRKVMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLL 660
Query: 661 DEVKNLGYEPVEYMEVIEEE-DEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 720
DEVK LGYEPV+YMEVIEEE +E VFSSTIYHSEKLA+AFGLLNLP A IRVVK+ITM
Sbjct: 661 DEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAIAFGLLNLPKATQIRVVKNITM 720
Query: 721 CRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDLL 764
CRDCHNFIRF+SLL GREIVIRDSKQLHKF NGYCSC GFGDLL
Sbjct: 721 CRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCRGFGDLL 764
BLAST of Lcy01g012030 vs. NCBI nr
Match:
XP_023001915.1 (pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >XP_023001916.1 pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima])
HSP 1 Score: 1379.4 bits (3569), Expect = 0.0e+00
Identity = 687/764 (89.92%), Postives = 724/764 (94.76%), Query Frame = 0
Query: 1 MASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLRE 60
MASLPSVTLTAAL L+SDVRKRHSTS L+ DKSA V YQKNQSLIQLNVDAE KFVD+RE
Sbjct: 1 MASLPSVTLTAALNLDSDVRKRHSTSLLLKDKSASVSYQKNQSLIQLNVDAEPKFVDVRE 60
Query: 61 ALSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAK 120
ALSLL+EGT ++TSYY+PLLQEC+D LAAEAEIIHGHIVKTGTHEDLFV T LVNVYAK
Sbjct: 61 ALSLLKEGTTVKTSYYVPLLQECVDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAK 120
Query: 121 CGVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIV 180
CGV+E ARKVFDNLPRRNVVAWTTL TGYVQNSQPL AL+VFIEMLQAGAYPTN+TLGIV
Sbjct: 121 CGVVEKARKVFDNLPRRNVVAWTTLVTGYVQNSQPLPALKVFIEMLQAGAYPTNFTLGIV 180
Query: 181 LNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNV 240
LNACSSLQSIELGKQVHAYIIKYH+DFDTSIGNSLSSFYSKFGCLE AIRAFQKIKEKNV
Sbjct: 181 LNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNV 240
Query: 241 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 300
ISWTSVVSACGDNGQAARSL FFT+MLSEGVEPNEYTLTS LS CCVMLTL LGAQ+HSL
Sbjct: 241 ISWTSVVSACGDNGQAARSLCFFTKMLSEGVEPNEYTLTSVLSTCCVMLTLSLGAQIHSL 300
Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 360
SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWN+MIAGHAKMMD A D
Sbjct: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNSMIAGHAKMMDAAED 360
Query: 361 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLA 420
DLAAHKSGSTALNMFQKLH SG+KPDLFTFSSVLSVCS LVALEQGEQ HAQIIKSGVLA
Sbjct: 361 DLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQTHAQIIKSGVLA 420
Query: 421 DVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
D+VVGTAL+SMYNKCGSI +A KAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR
Sbjct: 421 DIVVGTALISMYNKCGSISEARKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
Query: 481 LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQV 540
LAG++PNQ+TFVGVLSACSHAGLVDEALYYFEVMQKQ I+PVMDHFACMIDMY+RLG+V
Sbjct: 481 LAGVKPNQITFVGVLSACSHAGLVDEALYYFEVMQKQCRIEPVMDHFACMIDMYMRLGRV 540
Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMY 600
EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGN+ELGFYAAEQLLKL PKDTE+Y++LLNMY
Sbjct: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNSELGFYAAEQLLKLRPKDTESYISLLNMY 600
Query: 601 LSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVL 660
+SAGRWKDVS VRKLMKEEK+GKLKDWSWISIKEKVYSFKPNDKSHCQ+AEMY LLET+L
Sbjct: 601 ISAGRWKDVSTVRKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQTAEMYKLLETLL 660
Query: 661 DEVKNLGYEPVEYMEVIEEE-DEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 720
DEVK LGYEPV+YMEVIEEE +E VFSSTIYHSEKLAVAFGLLNLP A IRVVK+ITM
Sbjct: 661 DEVKPLGYEPVQYMEVIEEEKGDETVFSSTIYHSEKLAVAFGLLNLPKATQIRVVKNITM 720
Query: 721 CRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDLL 764
CRDCHNFIRF+SLL GREIVIRDSKQLHKF NGYCSCGGFGDLL
Sbjct: 721 CRDCHNFIRFVSLLTGREIVIRDSKQLHKFSNGYCSCGGFGDLL 764
BLAST of Lcy01g012030 vs. NCBI nr
Match:
KAG6585316.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1353.6 bits (3502), Expect = 0.0e+00
Identity = 677/764 (88.61%), Postives = 712/764 (93.19%), Query Frame = 0
Query: 1 MASLPSVTLTAALRLESDVRKRHSTSFLVNDKSAGVLYQKNQSLIQLNVDAESKFVDLRE 60
MASLPSVT TA L L+SDVRKRHSTS L+ DKSA V QKNQSLIQLNVDAE KFVD RE
Sbjct: 1 MASLPSVTFTAPLNLDSDVRKRHSTSLLLKDKSASVPNQKNQSLIQLNVDAEPKFVDFRE 60
Query: 61 ALSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAK 120
ALSLL+EGT ++TSYY+PLLQECID LAAEAEIIHGHIVKTGTHEDLFV T LVNVYAK
Sbjct: 61 ALSLLKEGTTVKTSYYVPLLQECIDRKLAAEAEIIHGHIVKTGTHEDLFVMTNLVNVYAK 120
Query: 121 CGVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIV 180
CGVME+ARKVFDNLPRRNVVAWTTL TGYVQNSQPL AL+VFIEMLQAGAYPTN+TLGIV
Sbjct: 121 CGVMEHARKVFDNLPRRNVVAWTTLVTGYVQNSQPLVALKVFIEMLQAGAYPTNFTLGIV 180
Query: 181 LNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNV 240
LNACSSLQSIELGKQVHAYIIKYH+DFDTSIGNSLSSFYSKFGCLE AIRAFQKIKEKNV
Sbjct: 181 LNACSSLQSIELGKQVHAYIIKYHLDFDTSIGNSLSSFYSKFGCLELAIRAFQKIKEKNV 240
Query: 241 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 300
ISWTSVVSACGDNGQA RSLSFFTEMLSEGVEPNEYT S LS CCVM TL LGAQ+HSL
Sbjct: 241 ISWTSVVSACGDNGQATRSLSFFTEMLSEGVEPNEYTFASVLSTCCVMQTLSLGAQIHSL 300
Query: 301 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 360
SIKLGYGSSIPI +SVMYLYLKCGWLIEAQ +FEGMET NLITWN+MIAGHAKMMD A D
Sbjct: 301 SIKLGYGSSIPINSSVMYLYLKCGWLIEAQTVFEGMETPNLITWNSMIAGHAKMMDAAED 360
Query: 361 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLA 420
DLAAHKSGSTALNMFQKLH SG+KPDLFTFSSVLSVCS LVALEQGEQ+HAQIIKSGVLA
Sbjct: 361 DLAAHKSGSTALNMFQKLHHSGIKPDLFTFSSVLSVCSRLVALEQGEQVHAQIIKSGVLA 420
Query: 421 DVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMR 480
DVVVGTALVSMYNKCGSID+A KAFLEMPSRTLISWTSMITG A+HGLSQQAL++FEDMR
Sbjct: 421 DVVVGTALVSMYNKCGSIDEASKAFLEMPSRTLISWTSMITGLAQHGLSQQALRVFEDMR 480
Query: 481 LAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQV 540
LAG+ PN++TFVGVLSACSH GLVDEALYYFEVMQKQY I+PVMDHFACMIDMY+RLG+V
Sbjct: 481 LAGVEPNKITFVGVLSACSHGGLVDEALYYFEVMQKQYKIEPVMDHFACMIDMYMRLGRV 540
Query: 541 EEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMY 600
EEAFDVVKKMNFEPNE+IWSM+IAGCRSHGN+ELGFYAAEQLLKL PKDTETYV+LLNMY
Sbjct: 541 EEAFDVVKKMNFEPNEVIWSMIIAGCRSHGNSELGFYAAEQLLKLRPKDTETYVSLLNMY 600
Query: 601 LSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVL 660
LSAGRWKDVSKVRKLMKEEKLGKLKDWSWI+IKEKVYSFKPNDKSH Q+AEMY LLET+L
Sbjct: 601 LSAGRWKDVSKVRKLMKEEKLGKLKDWSWITIKEKVYSFKPNDKSHHQTAEMYELLETLL 660
Query: 661 DEVKNLGYEPVEYMEVIEEED-EEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 720
DEVK LGYEP +Y E IEEE+ EE VFSSTIYHSEKLAVAF LLNLPTA PIRVVKSITM
Sbjct: 661 DEVKPLGYEPGQYTEAIEEENGEETVFSSTIYHSEKLAVAFSLLNLPTATPIRVVKSITM 720
Query: 721 CRDCHNFIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGFGDLL 764
CRDCHNFIRFISLL GREIVIRD KQLHKF NGYCSC GFGDLL
Sbjct: 721 CRDCHNFIRFISLLTGREIVIRDKKQLHKFSNGYCSCRGFGDLL 764
BLAST of Lcy01g012030 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 486.5 bits (1251), Expect = 3.9e-137
Identity = 265/767 (34.55%), Postives = 444/767 (57.89%), Query Frame = 0
Query: 79 LLQECID-SNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKCGVMENARKV------- 138
LLQ+ ++ SN A+++H ++K+G +++ L+NVY+K G +ARK+
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 139 ------------------------FDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEML 198
FD LP+R+ V+WTT+ GY Q A+RV +M+
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 199 QAGAYPTNYTLGIVLNACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSK----- 258
+ G PT +TL VL + ++ + +E GK+VH++I+K + + S+ NSL + Y+K
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 259 --------------------------FGCLEFAIRAFQKIKEKNVISWTSVVSACGDNGQ 318
G ++ A+ F+++ E+++++W S++S G
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGY 258
Query: 319 AARSLSFFTEMLSEG-VEPNEYTLTSALSACCVMLTLGLGAQVHSLSIKLGYGSSIPIKN 378
R+L F++ML + + P+ +TL S LSAC + L +G Q+HS + G+ S + N
Sbjct: 259 DLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN 318
Query: 379 SVMYLYLKCGWLIEAQKLFE--GMETLNLITWNAMIAGHAKMMD----------LAADDL 438
+++ +Y +CG + A++L E G + L + + A++ G+ K+ D L D+
Sbjct: 319 ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDV 378
Query: 439 AA----------HKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQ 498
A H S A+N+F+ + G +P+ +T +++LSV SSL +L G+QIH
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGS 438
Query: 499 IIKSGVLADVVVGTALVSMYNKCGSIDKAGKAF-LEMPSRTLISWTSMITGFARHGLSQQ 558
+KSG + V V AL++MY K G+I A +AF L R +SWTSMI A+HG +++
Sbjct: 439 AVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEE 498
Query: 559 ALQLFEDMRLAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMI 618
AL+LFE M + G+RP+ +T+VGV SAC+HAGLV++ YF++M+ I P + H+ACM+
Sbjct: 499 ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMV 558
Query: 619 DMYLRLGQVEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTE 678
D++ R G ++EA + ++KM EP+ + W L++ CR H N +LG AAE+LL L P+++
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSG 618
Query: 679 TYVALLNMYLSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAE 738
Y AL N+Y + G+W++ +K+RK MK+ ++ K + +SWI +K KV+ F D +H + E
Sbjct: 619 AYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNE 678
Query: 739 MYNLLETVLDEVKNLGYEP--VEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTAI 757
+Y ++ + DE+K +GY P + +EEE +E++ +HSEKLA+AFGL++ P
Sbjct: 679 IYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILR---HHSEKLAIAFGLISTPDKT 738
BLAST of Lcy01g012030 vs. TAIR 10
Match:
AT3G49170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 476.5 bits (1225), Expect = 4.1e-134
Identity = 247/694 (35.59%), Postives = 416/694 (59.94%), Query Frame = 0
Query: 76 YIPLLQECIDSNLAAEAEIIHGHIVKTGTHE-DLFVTTFLVNVYAKC-GVMENARKVFDN 135
Y +++ C +S+ + G ++KTG E D+ V L++++ K ENA KVFD
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 136 LPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVLNACSSLQSIELG 195
+ NVV WT + T +Q P A+R F++M+ +G +TL V +AC+ L+++ LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 196 KQVHAYIIKYHIDFDTSIGNSLSSFYSKF---GCLEFAIRAFQKIKEKNVISWTSVVSAC 255
KQ+H++ I+ + D SL Y+K G ++ + F ++++ +V+SWT++++
Sbjct: 289 KQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 348
Query: 256 GDN-GQAARSLSFFTEMLSEG-VEPNEYTLTSALSACCVMLTLGLGAQVHSLSIKLGYGS 315
N A +++ F+EM+++G VEPN +T +SA AC + +G QV + K G S
Sbjct: 349 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 408
Query: 316 SIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADDLAAHKSG 375
+ + NSV+ +++K + +AQ+ FE + NL+++N + G + ++
Sbjct: 409 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF----------- 468
Query: 376 STALNMFQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLADVVVGTAL 435
A + ++ + FTF+S+LS +++ ++ +GEQIH+Q++K G+ + V AL
Sbjct: 469 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 528
Query: 436 VSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGIRPNQ 495
+SMY+KCGSID A + F M +R +ISWTSMITGFA+HG + + L+ F M G++PN+
Sbjct: 529 ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNE 588
Query: 496 VTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQVEEAFDVVK 555
VT+V +LSACSH GLV E +F M + + IKP M+H+ACM+D+ R G + +AF+ +
Sbjct: 589 VTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFIN 648
Query: 556 KMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMYLSAGRWKD 615
M F+ + ++W + CR H N ELG AA ++L+L P + Y+ L N+Y AG+W++
Sbjct: 649 TMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEE 708
Query: 616 VSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVLDEVKNLGY 675
+++R+ MKE L K SWI + +K++ F D +H + ++Y+ L+ ++ E+K GY
Sbjct: 709 STEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGY 768
Query: 676 EPVE--YMEVIEEEDEEKVFSSTIY-HSEKLAVAFGLLNLPTAIPIRVVKSITMCRDCHN 735
P + +EEE++E +Y HSEK+AVAFGL++ + P+RV K++ +C DCHN
Sbjct: 769 VPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHN 828
Query: 736 FIRFISLLKGREIVIRDSKQLHKFLNGYCSCGGF 760
+++IS + GREIV+RD + H F +G CSC +
Sbjct: 829 AMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDY 849
BLAST of Lcy01g012030 vs. TAIR 10
Match:
AT2G27610.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 473.8 bits (1218), Expect = 2.6e-133
Identity = 249/701 (35.52%), Postives = 414/701 (59.06%), Query Frame = 0
Query: 62 LSLLREGTRIETSYYIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKC 121
+ + EGT+ + + L + + +H +VK G + + V+ L+N+Y KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 122 GVMENARKVFDNLPRRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVL 181
G + AR +FD ++VV W ++ +GY N L AL +F M + + V+
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 182 NACSSLQSIELGKQVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIK-EKNV 241
C++L+ + +Q+H ++KY FD +I +L YSK + A+R F++I NV
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 242 ISWTSVVSACGDNGQAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSL 301
+SWT+++S N ++ F+EM +GV PNE+T + L+A V+ ++VH+
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQ 422
Query: 302 SIKLGYGSSIPIKNSVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAAD 361
+K Y S + +++ Y+K G + EA K+F G++ +++ W+AM+AG+A+ + A
Sbjct: 423 VVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA- 482
Query: 362 DLAAHKSGSTALNMFQKLHRSGMKPDLFTFSSVLSVCSSL-VALEQGEQIHAQIIKSGVL 421
A+ MF +L + G+KP+ FTFSS+L+VC++ ++ QG+Q H IKS +
Sbjct: 483 ----------AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 542
Query: 422 ADVVVGTALVSMYNKCGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDM 481
+ + V +AL++MY K G+I+ A + F + L+SW SMI+G+A+HG + +AL +F++M
Sbjct: 543 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 602
Query: 482 RLAGIRPNQVTFVGVLSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQ 541
+ ++ + VTF+GV +AC+HAGLV+E YF++M + I P +H +CM+D+Y R GQ
Sbjct: 603 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 662
Query: 542 VEEAFDVVKKMNFEPNEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNM 601
+E+A V++ M IW ++A CR H ELG AAE+++ + P+D+ YV L NM
Sbjct: 663 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 722
Query: 602 YLSAGRWKDVSKVRKLMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETV 661
Y +G W++ +KVRKLM E + K +SWI +K K YSF D+SH ++Y LE +
Sbjct: 723 YAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDL 782
Query: 662 LDEVKNLGYEPVEYMEVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITM 721
+K+LGYEP + V+++ D+E + HSE+LA+AFGL+ P P+ ++K++ +
Sbjct: 783 STRLKDLGYEP-DTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRV 842
Query: 722 CRDCHNFIRFISLLKGREIVIRDSKQLHKF-LNGYCSCGGF 760
C DCH I+ I+ ++ REIV+RDS + H F +G CSCG F
Sbjct: 843 CGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDF 867
BLAST of Lcy01g012030 vs. TAIR 10
Match:
AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 468.4 bits (1204), Expect = 1.1e-131
Identity = 254/681 (37.30%), Postives = 390/681 (57.27%), Query Frame = 0
Query: 79 LLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKCGVMENARKVFDNLPRRN 138
LL+ C D + IHG +VK+G DLF T L N+YAKC + ARKVFD +P R+
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD 200
Query: 139 VVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVLNACSSLQSIELGKQVHA 198
+V+W T+ GY QN AL + M + P+ T+ VL A S+L+ I +GK++H
Sbjct: 201 LVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHG 260
Query: 199 YIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNVISWTSVVSACGDNGQAAR 258
Y ++ D +I +L Y+K G LE A + F + E+NV+SW S++ A N
Sbjct: 261 YAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKE 320
Query: 259 SLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSLSIKLGYGSSIPIKNSVMY 318
++ F +ML EGV+P + ++ AL AC + L G +H LS++LG ++ + NS++
Sbjct: 321 AMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLIS 380
Query: 319 LYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADDLAAHKSGSTALNMFQKL 378
+Y KC + A +F +++ L++WNAMI G A+ + ALN F ++
Sbjct: 381 MYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQ-----------NGRPIDALNYFSQM 440
Query: 379 HRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLADVVVGTALVSMYNKCGSI 438
+KPD FT+ SV++ + L + IH +++S + +V V TALV MY KCG+I
Sbjct: 441 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAI 500
Query: 439 DKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGIRPNQVTFVGVLSAC 498
A F M R + +W +MI G+ HG + AL+LFE+M+ I+PN VTF+ V+SAC
Sbjct: 501 MIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISAC 560
Query: 499 SHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQVEEAFDVVKKMNFEPNEII 558
SH+GLV+ L F +M++ Y+I+ MDH+ M+D+ R G++ EA+D + +M +P +
Sbjct: 561 SHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNV 620
Query: 559 WSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMYLSAGRWKDVSKVRKLMKE 618
+ ++ C+ H N AAE+L +L P D +V L N+Y +A W+ V +VR M
Sbjct: 621 YGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLR 680
Query: 619 EKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVLDEVKNLGYEPVEYMEVIE 678
+ L K S + IK +V+SF +H S ++Y LE ++ +K GY P + +
Sbjct: 681 QGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGV 740
Query: 679 EEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITMCRDCHNFIRFISLLKGREI 738
E D ++ ST HSEKLA++FGLLN I V K++ +C DCHN ++ISL+ GREI
Sbjct: 741 ENDVKEQLLST--HSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREI 800
Query: 739 VIRDSKQLHKFLNGYCSCGGF 760
V+RD ++ H F NG CSCG +
Sbjct: 801 VVRDMQRFHHFKNGACSCGDY 808
BLAST of Lcy01g012030 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 461.1 bits (1185), Expect = 1.8e-129
Identity = 239/685 (34.89%), Postives = 401/685 (58.54%), Query Frame = 0
Query: 76 YIPLLQECIDSNLAAEAEIIHGHIVKTGTHEDLFVTTFLVNVYAKCGVMENARKVFDNLP 135
+I +L + + A + +H +K G L V+ L+N+Y K AR VFDN+
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 136 RRNVVAWTTLATGYVQNSQPLAALRVFIEMLQAGAYPTNYTLGIVLNACSSL-QSIELGK 195
R++++W ++ G QN + A+ +F+++L+ G P YT+ VL A SSL + + L K
Sbjct: 378 ERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSK 437
Query: 196 QVHAYIIKYHIDFDTSIGNSLSSFYSKFGCLEFAIRAFQKIKEKNVISWTSVVSACGDNG 255
QVH + IK + D+ + +L YS+ C++ A F++ ++++W ++++ +
Sbjct: 438 QVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSH 497
Query: 256 QAARSLSFFTEMLSEGVEPNEYTLTSALSACCVMLTLGLGAQVHSLSIKLGYGSSIPIKN 315
++L F M +G +++TL + C + + G QVH+ +IK GY + + +
Sbjct: 498 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 557
Query: 316 SVMYLYLKCGWLIEAQKLFEGMETLNLITWNAMIAGHAKMMDLAADDLAAHKSGSTALNM 375
++ +Y+KCG + AQ F+ + + + W MI+G ++ ++ A H +
Sbjct: 558 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG---CIENGEEERAFH--------V 617
Query: 376 FQKLHRSGMKPDLFTFSSVLSVCSSLVALEQGEQIHAQIIKSGVLADVVVGTALVSMYNK 435
F ++ G+ PD FT +++ S L ALEQG QIHA +K D VGT+LV MY K
Sbjct: 618 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 677
Query: 436 CGSIDKAGKAFLEMPSRTLISWTSMITGFARHGLSQQALQLFEDMRLAGIRPNQVTFVGV 495
CGSID A F + + +W +M+ G A+HG ++ LQLF+ M+ GI+P++VTF+GV
Sbjct: 678 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 737
Query: 496 LSACSHAGLVDEALYYFEVMQKQYNIKPVMDHFACMIDMYLRLGQVEEAFDVVKKMNFEP 555
LSACSH+GLV EA + M Y IKP ++H++C+ D R G V++A ++++ M+ E
Sbjct: 738 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 797
Query: 556 NEIIWSMLIAGCRSHGNNELGFYAAEQLLKLGPKDTETYVALLNMYLSAGRWKDVSKVRK 615
+ ++ L+A CR G+ E G A +LL+L P D+ YV L NMY +A +W ++ R
Sbjct: 798 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 857
Query: 616 LMKEEKLGKLKDWSWISIKEKVYSFKPNDKSHCQSAEMYNLLETVLDEVKNLGYEPVEYM 675
+MK K+ K +SWI +K K++ F +D+S+ Q+ +Y ++ ++ ++K GY P
Sbjct: 858 MMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDF 917
Query: 676 EVIEEEDEEKVFSSTIYHSEKLAVAFGLLNLPTAIPIRVVKSITMCRDCHNFIRFISLLK 735
+++ E+EEK + YHSEKLAVAFGLL+ P + PIRV+K++ +C DCHN +++I+ +
Sbjct: 918 TLVDVEEEEKE-RALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVY 977
Query: 736 GREIVIRDSKQLHKFLNGYCSCGGF 760
REIV+RD+ + H+F +G CSCG +
Sbjct: 978 NREIVLRDANRFHRFKDGICSCGDY 989
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q9SHZ8 | 5.5e-136 | 34.55 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
| Q5G1T1 | 5.7e-133 | 35.59 | Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... | [more] |
| Q9ZUW3 | 3.7e-132 | 35.52 | Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana OX... | [more] |
| Q3E6Q1 | 1.6e-130 | 37.30 | Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... | [more] |
| Q9SMZ2 | 2.5e-128 | 34.89 | Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1BQL4 | 0.0e+00 | 92.78 | putative pentatricopeptide repeat-containing protein At5g52630 OS=Momordica char... | [more] |
| A0A6J1KJZ5 | 0.0e+00 | 89.92 | pentatricopeptide repeat-containing protein At4g21065-like OS=Cucurbita maxima O... | [more] |
| A0A6J1GH28 | 0.0e+00 | 88.09 | putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucurbita mosc... | [more] |
| A0A6J1KHZ4 | 0.0e+00 | 87.43 | putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucurbita maxi... | [more] |
| A0A1S3BBK8 | 0.0e+00 | 85.21 | putative pentatricopeptide repeat-containing protein At5g52630 OS=Cucumis melo O... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_022131569.1 | 0.0e+00 | 92.78 | putative pentatricopeptide repeat-containing protein At5g52630 [Momordica charan... | [more] |
| XP_038885496.1 | 0.0e+00 | 91.35 | putative pentatricopeptide repeat-containing protein At5g52630 [Benincasa hispid... | [more] |
| XP_023538358.1 | 0.0e+00 | 90.05 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita pepo subsp... | [more] |
| XP_023001915.1 | 0.0e+00 | 89.92 | pentatricopeptide repeat-containing protein At4g21065-like [Cucurbita maxima] >X... | [more] |
| KAG6585316.1 | 0.0e+00 | 88.61 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT2G22070.1 | 3.9e-137 | 34.55 | pentatricopeptide (PPR) repeat-containing protein | [more] |
| AT3G49170.1 | 4.1e-134 | 35.59 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT2G27610.1 | 2.6e-133 | 35.52 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT1G11290.1 | 1.1e-131 | 37.30 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT4G33170.1 | 1.8e-129 | 34.89 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
