Lcy01g011390 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g011390
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr01: 31978482 .. 31979732 (+)
RNA-Seq Expression	Lcy01g011390
Synteny	Lcy01g011390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGCTGATGTTCTTAGTAGAATGCTCTTATCGGTTGAACAAAGTGGCTCCATTGAAGGTTTCGGGGTCGGTAATTGCCCTCGGACAATGTCTATCTCTCATCTCCAGTTCGCCGACAACACCATTCTTTTTTCCTCCCCAAAGCAAGAACATATTATGAATCTTTTCAATGTTATTTGCTCCTTTGAAGCTATATCGAGGTTGAAAATTAATCGAAACAAGACTGAATTTTTGGGCATTGGCATGGACTCTCAACAGGCATCTCTTTTGGCATCGGTTTTTGGATGCAAGACAGGCTCTTGGCCGATAACTTATCTGGGCCTCCCTCTCAATGGCAACCCGAGGAAGACTAGTTTTTGGACCCCTATTATTGAAAAAATTCAGAAAAGATTGCACAACTGGGGATCACACAACATTTCCAAAGGAGGAAGACACACCCTTATCCAAGCTACCCTCTCAAACCTCCCCATTTATTATCTCTCCTTATTTCTAGCCCCAAAAAAAGTCTCCAAGGAGATTGAAAAGATGTATCGATTATTTCTTTGGCGAGGAGGCATAGAGAAAAAAGGTTGTCACTTGCTTAAATGGTCCATTGTTCAATCCCCCGTTCTTGAAGGAGGTCTAGGCATCTTTGATATTCACAAGAAAAATGTTTCCCTCTTAGCCAAATGGATTTGGAGATTTTACTCCGAACCGGAAGCTCTATGGAGAACTCTCATTGCCACCAAATTCGGAGTGGCCAAAAATCCGCTCAAGTTGGGAGATCTCTCACTGAAAACTTCAAAGGGGCCGTGGAAATCTATTCACAAGTTGCAGCCCTTTATCTACGACCATATTGAATCTAGGGTGGGAAATGGCACCAAAACTTTTTTTTGGGAGGATCTTTGGCTCGGCACTTCACCCCTAAAGGTACAGTATCCATCATTATATAATTTGTCTCTAAAAAAGGAGGGCACTATAACAGATTTATGGAACCCGATTGATGGATCCTGGAACCTCCATTTGAGAAGGAACCTTTCAGAAGCTGAGATTACCGAATGGGCTTATTTATCACACAATCTCACCAACTTCTCCATAAAAAATGAAGAGGACTCATGGTTTTGGTGCCTTGGAAATTCTGGTATTTTCTCTACTAGAACTCTCTTGCAGCAGATGGCCTCCTCCTCTCAGAATAGCAGTATAGATCTCTATGGTCAGTTATGGAAGGGATCCATGCCGAAAAAACAAATTCTTCGTCTGGGAGATTAG

mRNA sequence

ATGGTAGCTGATGTTCTTAGTAGAATGCTCTTATCGGTTGAACAAAGTGGCTCCATTGAAGGTTTCGGGGTCGGTAATTGCCCTCGGACAATGTCTATCTCTCATCTCCAGTTCGCCGACAACACCATTCTTTTTTCCTCCCCAAAGCAAGAACATATTATGAATCTTTTCAATGTTATTTGCTCCTTTGAAGCTATATCGAGGTTGAAAATTAATCGAAACAAGACTGAATTTTTGGGCATTGGCATGGACTCTCAACAGGCATCTCTTTTGGCATCGGTTTTTGGATGCAAGACAGGCTCTTGGCCGATAACTTATCTGGGCCTCCCTCTCAATGGCAACCCGAGGAAGACTAGTTTTTGGACCCCTATTATTGAAAAAATTCAGAAAAGATTGCACAACTGGGGATCACACAACATTTCCAAAGGAGGAAGACACACCCTTATCCAAGCTACCCTCTCAAACCTCCCCATTTATTATCTCTCCTTATTTCTAGCCCCAAAAAAAGTCTCCAAGGAGATTGAAAAGATGTATCGATTATTTCTTTGGCGAGGAGGCATAGAGAAAAAAGGTTGTCACTTGCTTAAATGGTCCATTGTTCAATCCCCCGTTCTTGAAGGAGGTCTAGGCATCTTTGATATTCACAAGAAAAATGTTTCCCTCTTAGCCAAATGGATTTGGAGATTTTACTCCGAACCGGAAGCTCTATGGAGAACTCTCATTGCCACCAAATTCGGAGTGGCCAAAAATCCGCTCAAGTTGGGAGATCTCTCACTGAAAACTTCAAAGGGGCCGTGGAAATCTATTCACAAGTTGCAGCCCTTTATCTACGACCATATTGAATCTAGGGTGGGAAATGGCACCAAAACTTTTTTTTGGGAGGATCTTTGGCTCGGCACTTCACCCCTAAAGGTACAGTATCCATCATTATATAATTTGTCTCTAAAAAAGGAGGGCACTATAACAGATTTATGGAACCCGATTGATGGATCCTGGAACCTCCATTTGAGAAGGAACCTTTCAGAAGCTGAGATTACCGAATGGGCTTATTTATCACACAATCTCACCAACTTCTCCATAAAAAATGAAGAGGACTCATGGTTTTGGTGCCTTGGAAATTCTGGTATTTTCTCTACTAGAACTCTCTTGCAGCAGATGGCCTCCTCCTCTCAGAATAGCAGTATAGATCTCTATGGTCAGTTATGGAAGGGATCCATGCCGAAAAAACAAATTCTTCGTCTGGGAGATTAG

Coding sequence (CDS)

ATGGTAGCTGATGTTCTTAGTAGAATGCTCTTATCGGTTGAACAAAGTGGCTCCATTGAAGGTTTCGGGGTCGGTAATTGCCCTCGGACAATGTCTATCTCTCATCTCCAGTTCGCCGACAACACCATTCTTTTTTCCTCCCCAAAGCAAGAACATATTATGAATCTTTTCAATGTTATTTGCTCCTTTGAAGCTATATCGAGGTTGAAAATTAATCGAAACAAGACTGAATTTTTGGGCATTGGCATGGACTCTCAACAGGCATCTCTTTTGGCATCGGTTTTTGGATGCAAGACAGGCTCTTGGCCGATAACTTATCTGGGCCTCCCTCTCAATGGCAACCCGAGGAAGACTAGTTTTTGGACCCCTATTATTGAAAAAATTCAGAAAAGATTGCACAACTGGGGATCACACAACATTTCCAAAGGAGGAAGACACACCCTTATCCAAGCTACCCTCTCAAACCTCCCCATTTATTATCTCTCCTTATTTCTAGCCCCAAAAAAAGTCTCCAAGGAGATTGAAAAGATGTATCGATTATTTCTTTGGCGAGGAGGCATAGAGAAAAAAGGTTGTCACTTGCTTAAATGGTCCATTGTTCAATCCCCCGTTCTTGAAGGAGGTCTAGGCATCTTTGATATTCACAAGAAAAATGTTTCCCTCTTAGCCAAATGGATTTGGAGATTTTACTCCGAACCGGAAGCTCTATGGAGAACTCTCATTGCCACCAAATTCGGAGTGGCCAAAAATCCGCTCAAGTTGGGAGATCTCTCACTGAAAACTTCAAAGGGGCCGTGGAAATCTATTCACAAGTTGCAGCCCTTTATCTACGACCATATTGAATCTAGGGTGGGAAATGGCACCAAAACTTTTTTTTGGGAGGATCTTTGGCTCGGCACTTCACCCCTAAAGGTACAGTATCCATCATTATATAATTTGTCTCTAAAAAAGGAGGGCACTATAACAGATTTATGGAACCCGATTGATGGATCCTGGAACCTCCATTTGAGAAGGAACCTTTCAGAAGCTGAGATTACCGAATGGGCTTATTTATCACACAATCTCACCAACTTCTCCATAAAAAATGAAGAGGACTCATGGTTTTGGTGCCTTGGAAATTCTGGTATTTTCTCTACTAGAACTCTCTTGCAGCAGATGGCCTCCTCCTCTCAGAATAGCAGTATAGATCTCTATGGTCAGTTATGGAAGGGATCCATGCCGAAAAAACAAATTCTTCGTCTGGGAGATTAG

Protein sequence

MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVICSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSFWTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRLFLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTLIATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGTSPLKVQYPSLYNLSLKKEGTITDLWNPIDGSWNLHLRRNLSEAEITEWAYLSHNLTNFSIKNEEDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKKQILRLGD

Homology

[Close]

BLAST of Lcy01g011390 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.7e-25
Identity = 81/302 (26.82%), Postives = 135/302 (44.70%), Query Frame = 0


Query: 124 IIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRLFLW 183
           I+E++  R+  W    +S  GR TL +A LS++P++ +S  L P+ +   ++++ R FLW
Sbjct: 16  ILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRTFLW 75

Query: 184 RGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTLIAT 243
               EKK  HL+KWS V SP  EGGLG+      N +L++K  WR   E  +LW  ++  
Sbjct: 76  GSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQK 135

Query: 244 KFGVAKNPLKLGDLSLKTSKGPWKSIHK-----LQPFIYDHIESRVGNGTKTFFWEDLWL 303
           K+ V     ++ D      KG W S  +     L+  +   +    G+G +  FW D W+
Sbjct: 136 KYHVG----EIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWV 195

Query: 304 GTSPL----KVQYPSLYNLSLKKEGTITDLWNPIDGSWNLHLRRNLSEAEITEWAYLSHN 363
              PL      + P+  +  + K     DLW P  G W+         A+I  +   +  
Sbjct: 196 SGKPLLELDNGERPTDCDTVVAK-----DLWIPGRG-WDF--------AKIDPYTTNNTR 255

Query: 364 LTNFS-----IKNEEDSWFWCLGNSGIFSTRTLLQQMASSS--QNSSIDLYGQLWKGSMP 410
           L   +     +    D   W     G FS R+  + +      + +    +  LWK  +P
Sbjct: 256 LELRAVVLDLVTGARDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVP 299

[Close]

BLAST of Lcy01g011390 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.7e-06
Identity = 37/145 (25.52%), Postives = 66/145 (45.52%), Query Frame = 0


Query: 156 LPIYYLSLFLAPKKVSKEIEKMYRLFLWRGGIEKKGCHLLKW-SIVQSPVLEGGLGIFDI 215
           LP+Y +S F   K + K++      F W     K+    + W  + +S   +GGLG  D+
Sbjct: 3   LPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDL 62

Query: 216 HKKNVSLLAKWIWRFYSEPEALWRTLIATKFGVAKNPLKLGDLSLKTSKG-PWKSIHKLQ 275
              N +LLAK  +R   +P  L   L+ +++    + +   + S+ T     W+SI   +
Sbjct: 63  GWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMM---ECSVGTRPSYAWRSIIHGR 122

Query: 276 PFIYDHIESRVGNGTKTFFWEDLWL 299
             +   +   +G+G  T  W D W+
Sbjct: 123 ELLSRGLLRTIGDGIHTKVWLDRWI 144

[Close]

BLAST of Lcy01g011390 vs. ExPASy TrEMBL
Match: A0A438GYB4 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_124 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 3.1e-83
Identity = 166/411 (40.39%), Postives = 237/411 (57.66%), Query Frame = 0


Query: 1   MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
           +VADVLSRML+  E+   +EGF VG       +SHLQFAD+TI FS+ ++E +  L +++
Sbjct: 97  LVADVLSRMLVRAEERNMLEGFRVGR--NRTRVSHLQFADDTIFFSNTREEDLQTLKSLL 156

Query: 61  CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
            +F  IS LK+N +K+   GI +D    S LA   GCK   WPI YLGLPL GNPR   F
Sbjct: 157 LAFGHISGLKVNLDKSNIYGINLDHAHISRLAETLGCKASGWPILYLGLPLGGNPRAGGF 216

Query: 121 WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
           W P+IE+I +RL  W    +S GGR TLIQ+ L+++P YYLSLF  P  V+ +IE++ R 
Sbjct: 217 WDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYYLSLFKLPASVAAKIERLQRD 276

Query: 181 FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
           FLW G  E K  HL++W +V  P   GGLG  +I  +N++LL KW+WR+  E  ALW  +
Sbjct: 277 FLWSGIGEGKKDHLVRWDVVCKPKEIGGLGFGNISLRNLALLGKWLWRYPREGSALWHQV 336

Query: 241 IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
           I + +G   N      +   + + PWK+I ++           VGNG +  FWEDLW G 
Sbjct: 337 ILSIYGSHSNGWDANTIVRWSHRCPWKAISQVFQEFSSFTRFVVGNGERIRFWEDLWWGD 396

Query: 301 SPLKVQYPSLYNLSLKKEGTITDLWNPI-DGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
            PL  QYPSL+ + L K   I+ +  P    SWNL+ RRNLS++EI +   L  +L    
Sbjct: 397 QPLGSQYPSLFRVVLDKNIPISSVLGPTRPFSWNLNFRRNLSDSEIEDLEGLMRSLDGVH 456

Query: 361 IK-NEEDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
           +  +  D+  W L +SG+FS ++    ++    +  +     +W   +P K
Sbjct: 457 LSPSVPDARLWPLSSSGLFSVKSFFLALSQFFGSPQVFPSKFVWNSQIPFK 505

[Close]

BLAST of Lcy01g011390 vs. ExPASy TrEMBL
Match: A5BCI7 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_029474 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 1.2e-82
Identity = 168/411 (40.88%), Postives = 233/411 (56.69%), Query Frame = 0


Query: 1    MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
            +VADVLSRMLL  E+   +EGF VG       +SHLQFAD+TI FSS ++E +M L NV+
Sbjct: 1314 IVADVLSRMLLKAEERNVLEGFKVGR--NRTRVSHLQFADDTIFFSSSREEDMMTLKNVL 1373

Query: 61   CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
              F  IS LK+N +K+   GI ++    S LA +  CK   WPI YLGLPL GNP+ + F
Sbjct: 1374 LVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGF 1433

Query: 121  WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
            W P+IE+I +RL  W    +S GGR TLIQ+ L+++P Y+LSLF  P  V+ +IE+M R 
Sbjct: 1434 WDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRD 1493

Query: 181  FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
            FLW G  E K  HL+ W +V  P   GGLG   I  +NV+LL KW+WR+  E  ALW  +
Sbjct: 1494 FLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQV 1553

Query: 241  IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
            I + +G   N   + ++   + + PWK+I  +           VGNG +  FW+DLW G 
Sbjct: 1554 ILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGE 1613

Query: 301  SPLKVQYPSLYNLSLKKEGTITD-LWNPIDGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
             PL VQYP L  +   K   I+  L      SWN   RRNLS++EI +   L  +L    
Sbjct: 1614 QPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSLDRLH 1673

Query: 361  IKNE-EDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
            I +   D   W L  SG+F+ ++    ++  S++ +I     +W   +P K
Sbjct: 1674 ISSSVPDKRSWFLSPSGLFTVKSFFLALSQYSESPTIFPTKFVWNAQVPFK 1722

[Close]

BLAST of Lcy01g011390 vs. ExPASy TrEMBL
Match: A5AXP7 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_010897 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.5e-82
Identity = 167/411 (40.63%), Postives = 232/411 (56.45%), Query Frame = 0


Query: 1   MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
           +VADVLSRMLL  E+   +EGF VG       +SHLQFAD+TI FSS ++E +M L NV+
Sbjct: 97  IVADVLSRMLLKAEERNVLEGFKVGR--NRTRVSHLQFADDTIFFSSSREEDMMTLKNVL 156

Query: 61  CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
             F  IS LK+N +K+   GI ++    S LA +  CK   WPI YLGLPL GNP+ + F
Sbjct: 157 LVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGF 216

Query: 121 WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
           W P+IE+I +RL  W    +S GGR TLIQ+ L+++P Y+LSLF  P  V+ +IE+M R 
Sbjct: 217 WDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRD 276

Query: 181 FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
           FLW G  E K  HL+ W +V  P   GGLG   I  +NV+LL KW+WR+  E  ALW  +
Sbjct: 277 FLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQV 336

Query: 241 IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
           I + +G   N   + ++   + + PWK+I  +           VGNG + +FW+DLW G 
Sbjct: 337 ILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIWFWDDLWWGE 396

Query: 301 SPLKVQYPSLYNLSLKKEGTITD-LWNPIDGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
            PL VQYP L  +   K   I+  L      SWN   RRNLS++EI +   L  +     
Sbjct: 397 QPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLH 456

Query: 361 IKNE-EDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
           I +   D   W L  SG+F+ ++    ++  S++  I     +W   +P K
Sbjct: 457 ISSSVPDKRSWSLSPSGLFTVKSFFLALSQYSESPPIFPTKFVWNAQVPFK 505

[Close]

BLAST of Lcy01g011390 vs. ExPASy TrEMBL
Match: A5BUT3 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_026823 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82
Identity = 166/411 (40.39%), Postives = 238/411 (57.91%), Query Frame = 0


Query: 1    MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
            +VADVLSRML+  E+   +EGF VG       +SHLQF D+TI FS+ ++E +  L +++
Sbjct: 1277 LVADVLSRMLMRAEERNLMEGFRVGR--NRTRVSHLQFVDDTIFFSNSREEELQTLKSLL 1336

Query: 61   CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
              F  IS LK+N NK+   GI +D    S LA +  CK   WPI YLGLPL GNP+   F
Sbjct: 1337 LVFGHISGLKVNLNKSSIYGINLDQAHLSRLAEMLDCKASGWPILYLGLPLGGNPKACGF 1396

Query: 121  WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
            W P++E+I  RL  W    +S GGR TLIQ+ LS+LP Y+LSLF  P  V+ +IE++ R 
Sbjct: 1397 WDPVVERISSRLDGWQKAYLSXGGRITLIQSCLSHLPSYFLSLFKMPASVAAKIERLQRD 1456

Query: 181  FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
            FLW G  E K  HL++W IV  P   GGLG+ +I  +N++LL KW+WR+  E  ALW  +
Sbjct: 1457 FLWSGVGEGKRDHLVRWDIVCKPKTIGGLGLGNISWRNLALLGKWLWRYPREGSALWHQV 1516

Query: 241  IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
            I + +G   N      L   + + PWK+I ++           VGNG +  FWEDLW G 
Sbjct: 1517 ILSIYGSHSNGWDANTLVRWSHRCPWKAIAQVFQEFSLITRYVVGNGDRIRFWEDLWRGD 1576

Query: 301  SPLKVQYPSLYNLSLKKEGTITDLWNPI-DGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
             PL +QYP L+ + + K  +I+ +  P     WNL+ RRNLS++EI +   L  +L +  
Sbjct: 1577 QPLGIQYPRLFRVVVDKNISISSVLGPSRPFLWNLNFRRNLSDSEIEDLEGLMRSLDDLY 1636

Query: 361  IK-NEEDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
            +  +  D+  W L +SG+FS ++    ++ SS +S       +W   +P K
Sbjct: 1637 LSPSIPDARLWPLSSSGLFSVKSFFLALSQSSGSSQNFPSKFVWNSQVPFK 1685

[Close]

BLAST of Lcy01g011390 vs. ExPASy TrEMBL
Match: A5C624 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_040148 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-82
Identity = 165/411 (40.15%), Postives = 236/411 (57.42%), Query Frame = 0


Query: 1    MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
            +VADVLSRMLL  E+   +EGF VG       +SHLQFA++TI FS+ ++E +  L +++
Sbjct: 1387 LVADVLSRMLLRAEERNMLEGFRVGR--NRTRVSHLQFABDTIFFSNTREEDLQTLKSLL 1446

Query: 61   CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
             +F  IS LK+N +K+   GI +D    S LA    CK   WPI YLGLPL GNPR   F
Sbjct: 1447 LAFGHISGLKVNLDKSNIYGINLDQAHISRLAETLECKASGWPILYLGLPLGGNPRAGGF 1506

Query: 121  WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
            W P+IE+I +RL  W    +S GGR TLIQ+ L+++P YYLSLF  P  V+ +IE++ R 
Sbjct: 1507 WDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYYLSLFKLPAXVAAKIERLQRD 1566

Query: 181  FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
            FLW G  E K  HL++W +V  P   GGLG  +I  +N++LL KW+WR+  E  ALW  +
Sbjct: 1567 FLWSGIGEGKKDHLVRWDVVCKPKEIGGLGFGNISLRNLALLGKWLWRYPREGXALWXQV 1626

Query: 241  IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
            I + +G   N      +   + + PWK+I ++           VGNG +  FWEDLW G 
Sbjct: 1627 ILSIYGSHSNGWDANTIVRWSHRCPWKAISQVFQEFSSFTRFVVGNGERIRFWEDLWWGD 1686

Query: 301  SPLKVQYPSLYNLSLKKEGTITDLWNPI-DGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
             PL  QYPSL+ + L K   I+ +  P    SWNL+ RRNLS++EI +   L  +L    
Sbjct: 1687 QPLGSQYPSLFRVVLDKNIPISSVLGPTRPFSWNLNFRRNLSDSEIEDLEGLMRSLDGVH 1746

Query: 361  IK-NEEDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
            +  +  D+  W L +SG+FS ++    ++    +  +     +W   +P K
Sbjct: 1747 LSPSVPDAXLWPLSSSGLFSVKSFFLALSQFFGSPQVFPSKFVWNSQIPFK 1795

[Close]

BLAST of Lcy01g011390 vs. NCBI nr
Match: RVW77187.1 (putative ribonuclease H protein [Vitis vinifera])

HSP 1 Score: 318.9 bits (816), Expect = 6.4e-83
Identity = 166/411 (40.39%), Postives = 237/411 (57.66%), Query Frame = 0


Query: 1   MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
           +VADVLSRML+  E+   +EGF VG       +SHLQFAD+TI FS+ ++E +  L +++
Sbjct: 97  LVADVLSRMLVRAEERNMLEGFRVGR--NRTRVSHLQFADDTIFFSNTREEDLQTLKSLL 156

Query: 61  CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
            +F  IS LK+N +K+   GI +D    S LA   GCK   WPI YLGLPL GNPR   F
Sbjct: 157 LAFGHISGLKVNLDKSNIYGINLDHAHISRLAETLGCKASGWPILYLGLPLGGNPRAGGF 216

Query: 121 WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
           W P+IE+I +RL  W    +S GGR TLIQ+ L+++P YYLSLF  P  V+ +IE++ R 
Sbjct: 217 WDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYYLSLFKLPASVAAKIERLQRD 276

Query: 181 FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
           FLW G  E K  HL++W +V  P   GGLG  +I  +N++LL KW+WR+  E  ALW  +
Sbjct: 277 FLWSGIGEGKKDHLVRWDVVCKPKEIGGLGFGNISLRNLALLGKWLWRYPREGSALWHQV 336

Query: 241 IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
           I + +G   N      +   + + PWK+I ++           VGNG +  FWEDLW G 
Sbjct: 337 ILSIYGSHSNGWDANTIVRWSHRCPWKAISQVFQEFSSFTRFVVGNGERIRFWEDLWWGD 396

Query: 301 SPLKVQYPSLYNLSLKKEGTITDLWNPI-DGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
            PL  QYPSL+ + L K   I+ +  P    SWNL+ RRNLS++EI +   L  +L    
Sbjct: 397 QPLGSQYPSLFRVVLDKNIPISSVLGPTRPFSWNLNFRRNLSDSEIEDLEGLMRSLDGVH 456

Query: 361 IK-NEEDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
           +  +  D+  W L +SG+FS ++    ++    +  +     +W   +P K
Sbjct: 457 LSPSVPDARLWPLSSSGLFSVKSFFLALSQFFGSPQVFPSKFVWNSQIPFK 505

[Close]

BLAST of Lcy01g011390 vs. NCBI nr
Match: CAN65484.1 (hypothetical protein VITISV_029474 [Vitis vinifera])

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-82
Identity = 168/411 (40.88%), Postives = 233/411 (56.69%), Query Frame = 0


Query: 1    MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
            +VADVLSRMLL  E+   +EGF VG       +SHLQFAD+TI FSS ++E +M L NV+
Sbjct: 1314 IVADVLSRMLLKAEERNVLEGFKVGR--NRTRVSHLQFADDTIFFSSSREEDMMTLKNVL 1373

Query: 61   CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
              F  IS LK+N +K+   GI ++    S LA +  CK   WPI YLGLPL GNP+ + F
Sbjct: 1374 LVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGF 1433

Query: 121  WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
            W P+IE+I +RL  W    +S GGR TLIQ+ L+++P Y+LSLF  P  V+ +IE+M R 
Sbjct: 1434 WDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRD 1493

Query: 181  FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
            FLW G  E K  HL+ W +V  P   GGLG   I  +NV+LL KW+WR+  E  ALW  +
Sbjct: 1494 FLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQV 1553

Query: 241  IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
            I + +G   N   + ++   + + PWK+I  +           VGNG +  FW+DLW G 
Sbjct: 1554 ILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGE 1613

Query: 301  SPLKVQYPSLYNLSLKKEGTITD-LWNPIDGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
             PL VQYP L  +   K   I+  L      SWN   RRNLS++EI +   L  +L    
Sbjct: 1614 QPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSLDRLH 1673

Query: 361  IKNE-EDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
            I +   D   W L  SG+F+ ++    ++  S++ +I     +W   +P K
Sbjct: 1674 ISSSVPDKRSWFLSPSGLFTVKSFFLALSQYSESPTIFPTKFVWNAQVPFK 1722

[Close]

BLAST of Lcy01g011390 vs. NCBI nr
Match: CAN80546.1 (hypothetical protein VITISV_010897 [Vitis vinifera])

HSP 1 Score: 316.6 bits (810), Expect = 3.2e-82
Identity = 167/411 (40.63%), Postives = 232/411 (56.45%), Query Frame = 0


Query: 1   MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
           +VADVLSRMLL  E+   +EGF VG       +SHLQFAD+TI FSS ++E +M L NV+
Sbjct: 97  IVADVLSRMLLKAEERNVLEGFKVGR--NRTRVSHLQFADDTIFFSSSREEDMMTLKNVL 156

Query: 61  CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
             F  IS LK+N +K+   GI ++    S LA +  CK   WPI YLGLPL GNP+ + F
Sbjct: 157 LVFGHISGLKVNLDKSNIYGINLEQNHLSRLAEMLDCKASGWPILYLGLPLGGNPKTSGF 216

Query: 121 WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
           W P+IE+I +RL  W    +S GGR TLIQ+ L+++P Y+LSLF  P  V+ +IE+M R 
Sbjct: 217 WDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRD 276

Query: 181 FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
           FLW G  E K  HL+ W +V  P   GGLG   I  +NV+LL KW+WR+  E  ALW  +
Sbjct: 277 FLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQV 336

Query: 241 IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
           I + +G   N   + ++   + + PWK+I  +           VGNG + +FW+DLW G 
Sbjct: 337 ILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIWFWDDLWWGE 396

Query: 301 SPLKVQYPSLYNLSLKKEGTITD-LWNPIDGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
            PL VQYP L  +   K   I+  L      SWN   RRNLS++EI +   L  +     
Sbjct: 397 QPLGVQYPRLLRVVTDKNAPISSILGYTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLH 456

Query: 361 IKNE-EDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
           I +   D   W L  SG+F+ ++    ++  S++  I     +W   +P K
Sbjct: 457 ISSSVPDKRSWSLSPSGLFTVKSFFLALSQYSESPPIFPTKFVWNAQVPFK 505

[Close]

BLAST of Lcy01g011390 vs. NCBI nr
Match: CAN64256.1 (hypothetical protein VITISV_040148 [Vitis vinifera])

HSP 1 Score: 316.2 bits (809), Expect = 4.1e-82
Identity = 165/411 (40.15%), Postives = 236/411 (57.42%), Query Frame = 0


Query: 1    MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
            +VADVLSRMLL  E+   +EGF VG       +SHLQFA++TI FS+ ++E +  L +++
Sbjct: 1387 LVADVLSRMLLRAEERNMLEGFRVGR--NRTRVSHLQFABDTIFFSNTREEDLQTLKSLL 1446

Query: 61   CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
             +F  IS LK+N +K+   GI +D    S LA    CK   WPI YLGLPL GNPR   F
Sbjct: 1447 LAFGHISGLKVNLDKSNIYGINLDQAHISRLAETLECKASGWPILYLGLPLGGNPRAGGF 1506

Query: 121  WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
            W P+IE+I +RL  W    +S GGR TLIQ+ L+++P YYLSLF  P  V+ +IE++ R 
Sbjct: 1507 WDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYYLSLFKLPAXVAAKIERLQRD 1566

Query: 181  FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
            FLW G  E K  HL++W +V  P   GGLG  +I  +N++LL KW+WR+  E  ALW  +
Sbjct: 1567 FLWSGIGEGKKDHLVRWDVVCKPKEIGGLGFGNISLRNLALLGKWLWRYPREGXALWXQV 1626

Query: 241  IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
            I + +G   N      +   + + PWK+I ++           VGNG +  FWEDLW G 
Sbjct: 1627 ILSIYGSHSNGWDANTIVRWSHRCPWKAISQVFQEFSSFTRFVVGNGERIRFWEDLWWGD 1686

Query: 301  SPLKVQYPSLYNLSLKKEGTITDLWNPI-DGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
             PL  QYPSL+ + L K   I+ +  P    SWNL+ RRNLS++EI +   L  +L    
Sbjct: 1687 QPLGSQYPSLFRVVLDKNIPISSVLGPTRPFSWNLNFRRNLSDSEIEDLEGLMRSLDGVH 1746

Query: 361  IK-NEEDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
            +  +  D+  W L +SG+FS ++    ++    +  +     +W   +P K
Sbjct: 1747 LSPSVPDAXLWPLSSSGLFSVKSFFLALSQFFGSPQVFPSKFVWNSQIPFK 1795

[Close]

BLAST of Lcy01g011390 vs. NCBI nr
Match: RVX17938.1 (CDP-diacylglycerol--serine O-phosphatidyltransferase 1 [Vitis vinifera])

HSP 1 Score: 316.2 bits (809), Expect = 4.1e-82
Identity = 167/411 (40.63%), Postives = 232/411 (56.45%), Query Frame = 0


Query: 1   MVADVLSRMLLSVEQSGSIEGFGVGNCPRTMSISHLQFADNTILFSSPKQEHIMNLFNVI 60
           +VADVLSRMLL  E+   +EGF VG       +SHLQFAD+TI FSS ++E +M L NV+
Sbjct: 435 IVADVLSRMLLKAEERNVLEGFKVGR--NRTRVSHLQFADDTIFFSSSREEDMMTLKNVL 494

Query: 61  CSFEAISRLKINRNKTEFLGIGMDSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSF 120
             F  IS LK+N +K+   GI ++    S LA +  CK   WPI YLGLPL GNP+ + F
Sbjct: 495 LVFGHISGLKVNLDKSNIYGINLEQNHLSRLAKMLDCKASGWPILYLGLPLGGNPKTSGF 554

Query: 121 WTPIIEKIQKRLHNWGSHNISKGGRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRL 180
           W P+IE+I +RL  W    +S GGR TLIQ+ L+++P Y+LSLF  P  V+ +IE+M R 
Sbjct: 555 WDPVIERISRRLDGWQKAYLSFGGRITLIQSCLTHMPCYFLSLFKIPASVAAKIERMQRD 614

Query: 181 FLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTL 240
           FLW G  E K  HL+ W +V  P   GGLG   I  +NV+LL KW+WR+  E  ALW  +
Sbjct: 615 FLWSGVGEGKRDHLVNWDVVCKPKSRGGLGFGKISIRNVALLGKWLWRYPREGSALWHQV 674

Query: 241 IATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLWLGT 300
           I + +G   N   + ++   + + PWK+I  +           VGNG +  FW+DLW G 
Sbjct: 675 ILSIYGSHSNGWDVNNIVRWSHRCPWKAIALVYQEFSKFTRFVVGNGDRIRFWDDLWWGE 734

Query: 301 SPLKVQYPSLYNLSLKKEGTITD-LWNPIDGSWNLHLRRNLSEAEITEWAYLSHNLTNFS 360
            PL VQYP L  +   K   I+  L +    SWN   RRNLS++EI +   L  +     
Sbjct: 735 QPLGVQYPRLLRVVTDKNAPISSILGSTRPFSWNFTFRRNLSDSEIEDLEGLMQSFDRLH 794

Query: 361 IKNE-EDSWFWCLGNSGIFSTRTLLQQMASSSQNSSIDLYGQLWKGSMPKK 410
           I +   D   W L  SG+F+ ++    ++  S++  I     +W   +P K
Sbjct: 795 ISSSVPDKRSWSLSPSGLFTVKSFFLALSQYSESPPIFPTKFVWNAQVPFK 843

[Close]

BLAST of Lcy01g011390 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.8e-20
Identity = 75/269 (27.88%), Postives = 117/269 (43.49%), Query Frame = 0


Query: 156 LPIYYLSLFLAPKKVSKEIEKMYRLFLWRGGIEKKGCHLLKWSIVQSPVLEGGLGIFDIH 215
           LP Y ++ FL PK V K+I  +   F WR   E KG H   W  +     EGG+G  DI 
Sbjct: 3   LPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDIE 62

Query: 216 KKNVSLLAKWIWRFYSEPEALWRTLIATKFGVAKNPLKLGDLSLKTSKGPWKSIHKLQPF 275
             N++LL K +WR  S PE+L   +  +++    +PL    L  + S   WKSIH  Q  
Sbjct: 63  AFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLN-APLGSRPS-FVWKSIHASQEI 122

Query: 276 IYDHIESRVGNGTKTFFWEDLWLGTSP----LKVQ-YPSLYNLSLKKEGTITDLWNPIDG 335
           +     + VGNG     W   WL + P    L++Q  P     S+     ++DL +    
Sbjct: 123 LRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGR 182

Query: 336 SWNLHLRRNLSEAEITEWAYLSHNLTNFSIKNEEDSWFWCLGNSGIFSTRT---LLQQMA 395
            W    R+++ E    E             +   DS+ W   +SG ++ ++   +L Q+ 
Sbjct: 183 EW----RKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWVLTQII 242

Query: 396 SS-------SQNSSIDLYGQLWKGSMPKK 410
           +        S+ S   +Y ++WK     K
Sbjct: 243 NKRSSPQEVSEPSLNPIYQKIWKSQTSPK 265

[Close]

BLAST of Lcy01g011390 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 94.4 bits (233), Expect = 2.4e-19
Identity = 62/214 (28.97%), Postives = 94/214 (43.93%), Query Frame = 0


Query: 84  DSQQASLLASVFGCKTGSWPITYLGLPLNGNPRKTSFWTPIIEKIQKRLHNWGSHNISKG 143
           D+ +A +L S F   +G+ P+ YLGLPL      TS + P++EKI+ R+  W + ++S  
Sbjct: 6   DNDKADILHS-FPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFA 65

Query: 144 GRHTLIQATLSNLPIYYLSLFLAPKKVSKEIEKMYRLFLWRGGIEKKGCHLLKWSIVQSP 203
           GR  LI + + +L  +++S F  P    KEI+ +   FLW G         + WS V +P
Sbjct: 66  GRLQLISSVIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTP 125

Query: 204 VLEGGLGIFDIHKKNVSLLAKWIWRFYSEPEALWRTLIATKFGVAKNPLKLGDLSLKTSK 263
             EGGLGI  + + N                + W     T  G                 
Sbjct: 126 KDEGGLGIRSLKEANKG--------------SFWSISGNTTLG----------------S 185

Query: 264 GPWKSIHKLQPFIYDHIESRVGNGTKTFFWEDLW 298
             WK I K +      ++  + NG+ T FW D W
Sbjct: 186 WMWKKILKHRALASGFVKHDIHNGSNTSFWFDNW 188

[Close]

BLAST of Lcy01g011390 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-07
Identity = 37/145 (25.52%), Postives = 66/145 (45.52%), Query Frame = 0


Query: 156 LPIYYLSLFLAPKKVSKEIEKMYRLFLWRGGIEKKGCHLLKW-SIVQSPVLEGGLGIFDI 215
           LP+Y +S F   K + K++      F W     K+    + W  + +S   +GGLG  D+
Sbjct: 3   LPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFRDL 62

Query: 216 HKKNVSLLAKWIWRFYSEPEALWRTLIATKFGVAKNPLKLGDLSLKTSKG-PWKSIHKLQ 275
              N +LLAK  +R   +P  L   L+ +++    + +   + S+ T     W+SI   +
Sbjct: 63  GWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMM---ECSVGTRPSYAWRSIIHGR 122

Query: 276 PFIYDHIESRVGNGTKTFFWEDLWL 299
             +   +   +G+G  T  W D W+
Sbjct: 123 ELLSRGLLRTIGDGIHTKVWLDRWI 144

The following BLAST results are available for this feature:

BLAST of Lcy01g011390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C2F6	1.7e-25	26.82	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P93295	1.7e-06	25.52	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lcy01g011390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A438GYB4	3.1e-83	40.39	Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_124 P...	[more]
A5BCI7	1.2e-82	40.88	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A5AXP7	1.5e-82	40.63	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A5BUT3	2.0e-82	40.39	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]
A5C624	2.0e-82	40.15	Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VI...	[more]

BLAST of Lcy01g011390 vs. NCBI nr


Match Name	E-value	Identity	Description
RVW77187.1	6.4e-83	40.39	putative ribonuclease H protein [Vitis vinifera]	[more]
CAN65484.1	2.4e-82	40.88	hypothetical protein VITISV_029474 [Vitis vinifera]	[more]
CAN80546.1	3.2e-82	40.63	hypothetical protein VITISV_010897 [Vitis vinifera]	[more]
CAN64256.1	4.1e-82	40.15	hypothetical protein VITISV_040148 [Vitis vinifera]	[more]
RVX17938.1	4.1e-82	40.63	CDP-diacylglycerol--serine O-phosphatidyltransferase 1 [Vitis vinifera]	[more]

BLAST of Lcy01g011390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	2.8e-20	27.88	Ribonuclease H-like superfamily protein	[more]
AT3G24255.1	2.4e-19	28.97	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
ATMG00310.1	1.2e-07	25.52	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 24..393
None	No IPR available	PANTHER	PTHR33116:SF33	OS01G0885550 PROTEIN	coord: 24..393

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g011390.1	Lcy01g011390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071704	organic substance metabolic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003824	catalytic activity