Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGGCAAGTAGCTGAATGGCAACAACTAAAGCAAAAGAAAGTTGTGGTTTGGGGAAGGAGAGGAAGATATCTGTCACTGTTCCTAATCATACTCCAACCAAGAGATCAACTCCAAAATCATCTCCAAGAGCTCCCTCCACTGATCAGAAACTATCTTCTTTACCTTTCTCTTCCTCCTCTTCTGCTCCTTCACTTTCGACACACACCGAGAAACATGTTCCGAACTATCTCAAGTCCACGGCCAGCTCCCGCCATGACCATAGCAGTAGCTTCAAGCCAATCAAGAAGACTACTACTGCAGCCCCTGCACCAATACCTGAGGGGAAGCCAAGTTTGAATAGAAGAAGATCTTTTGACAAACCGCCCCCGACCGCACCGCGTTTGGACAAGCCGTTTCGATCGCCTGGACCGAGGAATAGGGCGGCTCATGTTCCCGTCCGGTCTTCCTCTTTTGGGGCCAAACCCTCTTCCACCACAATTCTCAGTAGTTCTGCAAAGGTCTTGGAGAGATCAAGTTCCAAAAACTCCAAGGTGGGAGGAGGGGGGAAACCACTGCAACCACTTCAGACTATGATCAGAAGTAGTAGCAATGTGAAGAAAAGCTTGAGGAGAGAATCTAGCAATGCTGCTGCTGCTGCTGCTGCTGCTTCTGCTAAGAATGCTGTTGAACATGTAGACCGGAGTCCTTCTTTTGTTCTCGGCATGAACGACGAGGAATTGAAAAAGATCGAGTACGAACTCGATCCTTTTCTTCCTGATCCAATGCCTGAATTAGATAAACAACTTACAACTGATCAGGTGGAAAAGAAAGCAGTTCTGGATAAAGAGGAAGCTGAGGCTGAGAAGAAGCTTCACCATCAGCAGCAGCCTACAAATGACACAGAGATCTCCAAACTAGTTGTTTCTAATAAAGAGGTAGCTGAGACTGAAATTTCTATTGAGGCTGATGCGAAATCCCCGATCCAGGAAGACGAGAATCGAGAACGAAATCAAGGGGAAGGAGAAGAAGAAGAAGAAGCAGCCAAAGAAGAGGAGAAACCAGAGAGAACTGTAGTAGAAAAAGAGGATGTTGTTGCTGTTGTTACATCAGAGGAAAACACAAACAACAATAATGAGGAGAAGATGGTAACAGACGAGAAGAGCGAGACCGAGACCGAGACCGATCCCGGGGTCTCGGAAGGAGGCGAAGGAGCCGTTGTTTTAGATCAGAAAGAAGCACAAGATGGGCAGAGTTTCAAGGAAGAAAATCCCAACAGCAGTCCAGCAAAGGCAGAGACACCAGAGAAAGAGACCGAAGCGACCGAGAAGATGGCGGTAGCAGCAGCGGAGAAGGCGGCTGCAGCAGCAGGCAAACCACGACAAGGCGGACCGGGAAGGAAGGAGTCTCCAGCAATGTACAATCATGTAATAGAGGAGACAGCAAGCAAGCTTTTGGAGAAGAGGAAGAACAAGGTAAGAGCATTGGCTGGGGCATTTCAGACAGTCATTGACTATGAATCTTCATCCAAATGA
mRNA sequence
AAGGCAAGTAGCTGAATGGCAACAACTAAAGCAAAAGAAAGTTGTGGTTTGGGGAAGGAGAGGAAGATATCTGTCACTGTTCCTAATCATACTCCAACCAAGAGATCAACTCCAAAATCATCTCCAAGAGCTCCCTCCACTGATCAGAAACTATCTTCTTTACCTTTCTCTTCCTCCTCTTCTGCTCCTTCACTTTCGACACACACCGAGAAACATGTTCCGAACTATCTCAAGTCCACGGCCAGCTCCCGCCATGACCATAGCAGTAGCTTCAAGCCAATCAAGAAGACTACTACTGCAGCCCCTGCACCAATACCTGAGGGGAAGCCAAGTTTGAATAGAAGAAGATCTTTTGACAAACCGCCCCCGACCGCACCGCGTTTGGACAAGCCGTTTCGATCGCCTGGACCGAGGAATAGGGCGGCTCATGTTCCCGTCCGGTCTTCCTCTTTTGGGGCCAAACCCTCTTCCACCACAATTCTCAGTAGTTCTGCAAAGGTCTTGGAGAGATCAAGTTCCAAAAACTCCAAGGTGGGAGGAGGGGGGAAACCACTGCAACCACTTCAGACTATGATCAGAAGTAGTAGCAATGTGAAGAAAAGCTTGAGGAGAGAATCTAGCAATGCTGCTGCTGCTGCTGCTGCTGCTTCTGCTAAGAATGCTGTTGAACATGTAGACCGGAGTCCTTCTTTTGTTCTCGGCATGAACGACGAGGAATTGAAAAAGATCGAGTACGAACTCGATCCTTTTCTTCCTGATCCAATGCCTGAATTAGATAAACAACTTACAACTGATCAGGTGGAAAAGAAAGCAGTTCTGGATAAAGAGGAAGCTGAGGCTGAGAAGAAGCTTCACCATCAGCAGCAGCCTACAAATGACACAGAGATCTCCAAACTAGTTGTTTCTAATAAAGAGGTAGCTGAGACTGAAATTTCTATTGAGGCTGATGCGAAATCCCCGATCCAGGAAGACGAGAATCGAGAACGAAATCAAGGGGAAGGAGAAGAAGAAGAAGAAGCAGCCAAAGAAGAGGAGAAACCAGAGAGAACTGTAGTAGAAAAAGAGGATGTTGTTGCTGTTGTTACATCAGAGGAAAACACAAACAACAATAATGAGGAGAAGATGGTAACAGACGAGAAGAGCGAGACCGAGACCGAGACCGATCCCGGGGTCTCGGAAGGAGGCGAAGGAGCCGTTGTTTTAGATCAGAAAGAAGCACAAGATGGGCAGAGTTTCAAGGAAGAAAATCCCAACAGCAGTCCAGCAAAGGCAGAGACACCAGAGAAAGAGACCGAAGCGACCGAGAAGATGGCGGTAGCAGCAGCGGAGAAGGCGGCTGCAGCAGCAGGCAAACCACGACAAGGCGGACCGGGAAGGAAGGAGTCTCCAGCAATGTACAATCATGTAATAGAGGAGACAGCAAGCAAGCTTTTGGAGAAGAGGAAGAACAAGGTAAGAGCATTGGCTGGGGCATTTCAGACAGTCATTGACTATGAATCTTCATCCAAATGA
Coding sequence (CDS)
ATGGCAACAACTAAAGCAAAAGAAAGTTGTGGTTTGGGGAAGGAGAGGAAGATATCTGTCACTGTTCCTAATCATACTCCAACCAAGAGATCAACTCCAAAATCATCTCCAAGAGCTCCCTCCACTGATCAGAAACTATCTTCTTTACCTTTCTCTTCCTCCTCTTCTGCTCCTTCACTTTCGACACACACCGAGAAACATGTTCCGAACTATCTCAAGTCCACGGCCAGCTCCCGCCATGACCATAGCAGTAGCTTCAAGCCAATCAAGAAGACTACTACTGCAGCCCCTGCACCAATACCTGAGGGGAAGCCAAGTTTGAATAGAAGAAGATCTTTTGACAAACCGCCCCCGACCGCACCGCGTTTGGACAAGCCGTTTCGATCGCCTGGACCGAGGAATAGGGCGGCTCATGTTCCCGTCCGGTCTTCCTCTTTTGGGGCCAAACCCTCTTCCACCACAATTCTCAGTAGTTCTGCAAAGGTCTTGGAGAGATCAAGTTCCAAAAACTCCAAGGTGGGAGGAGGGGGGAAACCACTGCAACCACTTCAGACTATGATCAGAAGTAGTAGCAATGTGAAGAAAAGCTTGAGGAGAGAATCTAGCAATGCTGCTGCTGCTGCTGCTGCTGCTTCTGCTAAGAATGCTGTTGAACATGTAGACCGGAGTCCTTCTTTTGTTCTCGGCATGAACGACGAGGAATTGAAAAAGATCGAGTACGAACTCGATCCTTTTCTTCCTGATCCAATGCCTGAATTAGATAAACAACTTACAACTGATCAGGTGGAAAAGAAAGCAGTTCTGGATAAAGAGGAAGCTGAGGCTGAGAAGAAGCTTCACCATCAGCAGCAGCCTACAAATGACACAGAGATCTCCAAACTAGTTGTTTCTAATAAAGAGGTAGCTGAGACTGAAATTTCTATTGAGGCTGATGCGAAATCCCCGATCCAGGAAGACGAGAATCGAGAACGAAATCAAGGGGAAGGAGAAGAAGAAGAAGAAGCAGCCAAAGAAGAGGAGAAACCAGAGAGAACTGTAGTAGAAAAAGAGGATGTTGTTGCTGTTGTTACATCAGAGGAAAACACAAACAACAATAATGAGGAGAAGATGGTAACAGACGAGAAGAGCGAGACCGAGACCGAGACCGATCCCGGGGTCTCGGAAGGAGGCGAAGGAGCCGTTGTTTTAGATCAGAAAGAAGCACAAGATGGGCAGAGTTTCAAGGAAGAAAATCCCAACAGCAGTCCAGCAAAGGCAGAGACACCAGAGAAAGAGACCGAAGCGACCGAGAAGATGGCGGTAGCAGCAGCGGAGAAGGCGGCTGCAGCAGCAGGCAAACCACGACAAGGCGGACCGGGAAGGAAGGAGTCTCCAGCAATGTACAATCATGTAATAGAGGAGACAGCAAGCAAGCTTTTGGAGAAGAGGAAGAACAAGGTAAGAGCATTGGCTGGGGCATTTCAGACAGTCATTGACTATGAATCTTCATCCAAATGA
Protein sequence
MATTKAKESCGLGKERKISVTVPNHTPTKRSTPKSSPRAPSTDQKLSSLPFSSSSSAPSLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNRRRSFDKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPSSTTILSSSAKVLERSSSKNSKVGGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAAASAKNAVEHVDRSPSFVLGMNDEELKKIEYELDPFLPDPMPELDKQLTTDQVEKKAVLDKEEAEAEKKLHHQQQPTNDTEISKLVVSNKEVAETEISIEADAKSPIQEDENRERNQGEGEEEEEAAKEEEKPERTVVEKEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQKEAQDGQSFKEENPNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Homology
BLAST of Lcy01g010920 vs. ExPASy TrEMBL
Match:
A0A6J1K599 (microtubule-associated protein RP/EB family member 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492415 PE=4 SV=1)
HSP 1 Score: 493.8 bits (1270), Expect = 8.4e-136
Identity = 337/510 (66.08%), Postives = 378/510 (74.12%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRAPSTDQKLSSLPFS---S 60
MAT++AKESCGLGKERKI SVT+PN + + TPKSSPR STDQKLSS P S S
Sbjct: 1 MATSRAKESCGLGKERKITTPSSVTIPNPNTSTKRTPKSSPRGISTDQKLSSFPSSPSPS 60
Query: 61 SSSAPSLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNRRRSF 120
SSS SLS +KHVPNYLKSTASSRHDH +FKPIKK +A PAPIPEGKPSLNRRRSF
Sbjct: 61 SSSTHSLSILPQKHVPNYLKSTASSRHDH--NFKPIKK--SAGPAPIPEGKPSLNRRRSF 120
Query: 121 DKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPSSTTILSSSAKVLERSSSKNSKV 180
DKPPP RL KPFRSP PRNRAAH PVRSSSFGAKPS+T + S+ LERS SK KV
Sbjct: 121 DKPPPAMQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTLVSSTKTGFLERSGSKIYKV 180
Query: 181 GGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAA---ASAKNAVEHVDRSPSFVLGM 240
GGK Q +QT +SSSN++KSL+RESSNAA+A++A KNAVEHV +SP VLG+
Sbjct: 181 --GGKTQQSVQT-FKSSSNLRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGV 240
Query: 241 NDEELKKIEYELDPFLPDPMPELDKQL-TTDQVEKKAVLDKEEAEAEKKLHHQQQPTNDT 300
N+E+LKKIE ELD LPDP PELDK+L TTDQV EK+LHH QP DT
Sbjct: 241 NEEDLKKIECELDLCLPDPRPELDKELSTTDQV-------------EKRLHH-HQPIQDT 300
Query: 301 EISKLVVSNKEVAETEISIEAD-AKSPIQEDENRERNQGEGEEEEEAAKEEEKPERTVVE 360
+I K+V SNK+V ET + E D AKS I EDEN+E+N+GEGEEE AKEEEKPER VE
Sbjct: 301 KIFKVVGSNKKVEETPGAAETDNAKSSIWEDENQEQNEGEGEEE---AKEEEKPERIEVE 360
Query: 361 KEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQKEAQDGQSFK 420
KE+V VV SEE+TNN NEE EKS T+ EG +VL+ KEA+DGQS K
Sbjct: 361 KEEVYGVVASEESTNNKNEE-----EKSHTDPIQ--------EGVIVLEHKEAEDGQSSK 420
Query: 421 EENPNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESPAMYNHVIEET 480
EEN NS+ EKE EATEK+A AAA AAA A KPRQGGPGRKESPA+YNHVIEET
Sbjct: 421 EENHNST-------EKEAEATEKVAAAAA--AAAEAAKPRQGGPGRKESPAVYNHVIEET 464
Query: 481 ASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
ASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 ASKLLEKRKNKVRALAGAFQTVIDYESSSK 464
BLAST of Lcy01g010920 vs. ExPASy TrEMBL
Match:
A0A6J1HE16 (neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111462632 PE=4 SV=1)
HSP 1 Score: 491.5 bits (1264), Expect = 4.1e-135
Identity = 334/511 (65.36%), Postives = 375/511 (73.39%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRAPSTDQKLSSLP----FS 60
MAT++AKESCGLGKERKI SVT+PN + + TPKSSPR STDQKLSS P S
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNLNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSAPSLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNRRRS 120
SSSS SLS +KHVPNYLKSTASSRHDH +FKPIKK + PAPIPEGKPSLNRRRS
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDH--NFKPIKK--SGGPAPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPSSTTILSSSAKVLERSSSKNSK 180
FDKPPP RL KPFRSP PRNRAAH PVRSSSFGAKPS++ + S+ LERS SK K
Sbjct: 121 FDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTSIVSSTKTGFLERSGSKIYK 180
Query: 181 VGGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAA---ASAKNAVEHVDRSPSFVLG 240
V GGK Q +QT ++SSSNV+KSL+RESSNAA+A++A KNAVEHV +SP VLG
Sbjct: 181 V--GGKTQQSVQT-LKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLG 240
Query: 241 MNDEELKKIEYELDPFLPDPMPELDKQL-TTDQVEKKAVLDKEEAEAEKKLHHQQQPTND 300
N+E+LKKIE ELD LPDP PELDK+L TTDQV EK+LHH QP +
Sbjct: 241 ANEEDLKKIECELDLCLPDPRPELDKELSTTDQV-------------EKRLHH-HQPIQE 300
Query: 301 TEISKLVVSNKEVAETEISIEAD-AKSPIQEDENRERNQGEGEEEEEAAKEEEKPERTVV 360
T+I K+V SNK+V ET + E D AKS I+EDENRE+N+GEGEEE AKEEEKPER V
Sbjct: 301 TKIFKVVGSNKKVEETPGAAETDNAKSSIREDENREQNEGEGEEE---AKEEEKPERIEV 360
Query: 361 EKEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQKEAQDGQSF 420
EKE+V VV SEE+TNN NEE EKS T EG +VL+ KEA+DGQS
Sbjct: 361 EKEEVFGVVASEESTNNKNEE-----EKSHTVPIQ--------EGVIVLEHKEAEDGQSS 420
Query: 421 KEENPNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESPAMYNHVIEE 480
KEEN S+ EKETEATEK+A AA A A A KPRQGGPGRKESPA+YNHVIEE
Sbjct: 421 KEENHTST-------EKETEATEKVAAAATSAAEAVAAKPRQGGPGRKESPAVYNHVIEE 467
Query: 481 TASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
TASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 TASKLLEKRKNKVRALAGAFQTVIDYESSSK 467
BLAST of Lcy01g010920 vs. ExPASy TrEMBL
Match:
A0A1S3BBU4 (serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103488229 PE=4 SV=1)
HSP 1 Score: 457.6 bits (1176), Expect = 6.6e-125
Identity = 322/520 (61.92%), Postives = 373/520 (71.73%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRA--PSTDQKLSSLPFSSS 60
MATT++KES GLGKER+I SVT+PN+TPTKR TPKSSPR STD K+ S FSSS
Sbjct: 1 MATTRSKESGGLGKERRITPPSSVTIPNNTPTKR-TPKSSPRGFISSTDPKVPS--FSSS 60
Query: 61 SSAP-----SLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNR 120
S +P SLS EK VPNYLKSTASSR+DH +FKPI + + + PAPIPEGKPSLNR
Sbjct: 61 SPSPSSAPTSLSILPEKPVPNYLKSTASSRNDH--NFKPITR-SKSGPAPIPEGKPSLNR 120
Query: 121 RRSFDKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPS-STTILSSSAK--VLERS 180
RRSFDKPPPTAPRL+KPFRSPGPRNRA HVPVRSSSFGAKPS STTI+ S K LERS
Sbjct: 121 RRSFDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFGAKPSTSTTIIGHSTKPGFLERS 180
Query: 181 SSKNSKVGGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAAASA-------KNAVEH 240
SSK SKV GGKP P+Q++ SSS+VKKSLRRESSN AA+A+A+++ KNAVEH
Sbjct: 181 SSKISKV--GGKPQPPIQSLKTSSSHVKKSLRRESSNVAASASASASAEIVPKTKNAVEH 240
Query: 241 VDRSPSFVLGMNDEELKKIEYELDPFLPDPMPELDKQLTTDQVEKKAVLDKEEAEAEKKL 300
VD+SPSFVLG+N+E+LKKIE ELDP+LPDPMPELDKQ+ DQVEKKA LDK+E
Sbjct: 241 VDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQVRIDQVEKKAALDKDE------- 300
Query: 301 HHQQQPTNDTEISKLVVSNKEVAETEISIEADAKSPIQEDENRERNQGEGEEEEEAAKEE 360
DTEI K+VV+NKEV E E A+ + + NRE+N+G EEE KEE
Sbjct: 301 -------TDTEILKVVVTNKEVEEKETPGTAETEISL---ANREQNEG----EEEEPKEE 360
Query: 361 EKPERTVVEKEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQK 420
+KP+R VEKE+V+A+ EE+ NN N++ EKSET++
Sbjct: 361 DKPKRIGVEKEEVLAL---EESINNKNDQ-----EKSETDS------------------- 420
Query: 421 EAQDGQSFKEEN-PNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESP 480
DG+S KEEN NS+P AET EKE E+TEK A KPRQG PGRKESP
Sbjct: 421 -VLDGESCKEENDQNSTPKAAETTEKEAESTEKTA------------KPRQGAPGRKESP 451
Query: 481 AMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
A+YNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 AVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 451
BLAST of Lcy01g010920 vs. ExPASy TrEMBL
Match:
A0A5A7VBK4 (Serine/arginine repetitive matrix protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003220 PE=4 SV=1)
HSP 1 Score: 456.8 bits (1174), Expect = 1.1e-124
Identity = 322/522 (61.69%), Postives = 373/522 (71.46%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRA--PSTDQKLSSLPFSSS 60
MATT++KES GLGKER+I SVT+PN+TPTKR TPKSSPR STD K+ S FSSS
Sbjct: 1 MATTRSKESGGLGKERRITPPSSVTIPNNTPTKR-TPKSSPRGFISSTDPKVPS--FSSS 60
Query: 61 SSAP-----SLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNR 120
S +P SLS EK VPNYLKSTASSR+DH +FKPI + + + PAPIPEGKPSLNR
Sbjct: 61 SPSPSSAPTSLSILPEKPVPNYLKSTASSRNDH--NFKPITR-SKSGPAPIPEGKPSLNR 120
Query: 121 RRSFDKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPS-STTILSSSAK--VLERS 180
RRSFDKPPPTAPRL+KPFRSPGPRNRA HVPVRSSSFGAKPS STTI+ S K LERS
Sbjct: 121 RRSFDKPPPTAPRLEKPFRSPGPRNRATHVPVRSSSFGAKPSTSTTIIGHSTKPGFLERS 180
Query: 181 SSKNSKVGGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAAASA---------KNAV 240
SSK SKV GGKP P+Q++ SSS+VKKSLRRESSN AA+A+A+++ KNAV
Sbjct: 181 SSKISKV--GGKPQPPIQSLKTSSSHVKKSLRRESSNVAASASASASASAEIVPKTKNAV 240
Query: 241 EHVDRSPSFVLGMNDEELKKIEYELDPFLPDPMPELDKQLTTDQVEKKAVLDKEEAEAEK 300
EHVD+SPSFVLG+N+E+LKKIE ELDP+LPDPMPELDKQ+ DQVEKKA LDK+E
Sbjct: 241 EHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQVRIDQVEKKAALDKDE----- 300
Query: 301 KLHHQQQPTNDTEISKLVVSNKEVAETEISIEADAKSPIQEDENRERNQGEGEEEEEAAK 360
DTEI K+VV+NKEV E E A+ + + NRE+N+G EEE K
Sbjct: 301 ---------TDTEILKVVVTNKEVEEKETPGTAETEISL---ANREQNEG----EEEEPK 360
Query: 361 EEEKPERTVVEKEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLD 420
EE+KP+R VEKE+V+A+ EE+ NN N++ EKSET++
Sbjct: 361 EEDKPKRIGVEKEEVLAL---EESINNKNDQ-----EKSETDS----------------- 420
Query: 421 QKEAQDGQSFKEEN-PNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKE 480
DG+S KEEN NS+P AET EKE E+TEK A KPRQG PGRKE
Sbjct: 421 ---VLDGESCKEENDQNSTPKAAETTEKEAESTEKTA------------KPRQGAPGRKE 453
Query: 481 SPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
SPA+YNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 SPAVYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 453
BLAST of Lcy01g010920 vs. ExPASy TrEMBL
Match:
A0A0A0LS85 (CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G378000 PE=4 SV=1)
HSP 1 Score: 450.7 bits (1158), Expect = 8.1e-123
Identity = 318/531 (59.89%), Postives = 369/531 (69.49%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRA--PSTDQKL-----SSL 60
MATT++KESCGLGKERKI SVT+P++T TKR TPKSSPR STD K SS
Sbjct: 1 MATTRSKESCGLGKERKITPPSSVTIPSNTSTKR-TPKSSPRGIISSTDPKFPSFSPSSA 60
Query: 61 PFSSSSSAPSLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNR 120
P S SS+ SLS EKHVPNYLKSTASSR+DH +FKPI + + + PAPIPEG+PSLNR
Sbjct: 61 PSSPSSAPSSLSILPEKHVPNYLKSTASSRNDH--NFKPIAR-SKSGPAPIPEGRPSLNR 120
Query: 121 RRSFDKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPSSTTIL---SSSAKVLERS 180
RRSFDKPPPT PRL KPFRSPGPRNR HVPVRSSSFGAKPS+TT S+ LERS
Sbjct: 121 RRSFDKPPPTVPRLGKPFRSPGPRNRTPHVPVRSSSFGAKPSTTTTTIGHSTKPGFLERS 180
Query: 181 SSKNSKVGGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAAAS-------------- 240
SSK+SKV GGKP P+Q++ SSS VKKSLRRESSNAAA+A+A++
Sbjct: 181 SSKSSKV--GGKPQPPIQSLKTSSSYVKKSLRRESSNAAASASASASASASASASAEIVP 240
Query: 241 -AKNAVEHVDRSPSFVLGMNDEELKKIEYELDPFLPDPMPELDKQLTTDQVEKKAVLDKE 300
+KNAVEHVD+SPSFVLG+N+E+LKKIE ELDP+LPDPMPELDKQ+ DQVEKKAVLDK+
Sbjct: 241 KSKNAVEHVDQSPSFVLGVNEEDLKKIECELDPYLPDPMPELDKQIRLDQVEKKAVLDKD 300
Query: 301 EAEAEKKLHHQQQPTNDTEISKLVVSNKEV---AETEISIEADAKSPIQEDENRERNQGE 360
E DTEI K+VV+NKEV ET ++E + N+E+N+ E
Sbjct: 301 E--------------TDTEILKVVVTNKEVEEQKETPRTVETEISL-----ANQEQNERE 360
Query: 361 GEEEEEAAKEEEKPERTVVEKEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSE 420
GEE KEE+ P+R VEKE+VVA+ EE+ NN N++ EKSET++
Sbjct: 361 GEE----PKEEDNPKRIEVEKEEVVAL---EESINNKNDQ-----EKSETDS-------- 420
Query: 421 GGEGAVVLDQKEAQDGQSFKEE-NPNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKP 480
DG+S KEE + NS+P AET EKE E+TEK A KP
Sbjct: 421 ------------VLDGESCKEESDQNSTPKAAETTEKEAESTEKTA------------KP 462
Query: 481 RQGGPGRKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
RQGGPGRKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 RQGGPGRKESPAMYNHVIEETASKLLEKRKNKVRALAGAFQTVIDYESSSK 462
BLAST of Lcy01g010920 vs. NCBI nr
Match:
XP_022997522.1 (microtubule-associated protein RP/EB family member 1-like [Cucurbita maxima])
HSP 1 Score: 493.8 bits (1270), Expect = 1.7e-135
Identity = 337/510 (66.08%), Postives = 378/510 (74.12%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRAPSTDQKLSSLPFS---S 60
MAT++AKESCGLGKERKI SVT+PN + + TPKSSPR STDQKLSS P S S
Sbjct: 1 MATSRAKESCGLGKERKITTPSSVTIPNPNTSTKRTPKSSPRGISTDQKLSSFPSSPSPS 60
Query: 61 SSSAPSLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNRRRSF 120
SSS SLS +KHVPNYLKSTASSRHDH +FKPIKK +A PAPIPEGKPSLNRRRSF
Sbjct: 61 SSSTHSLSILPQKHVPNYLKSTASSRHDH--NFKPIKK--SAGPAPIPEGKPSLNRRRSF 120
Query: 121 DKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPSSTTILSSSAKVLERSSSKNSKV 180
DKPPP RL KPFRSP PRNRAAH PVRSSSFGAKPS+T + S+ LERS SK KV
Sbjct: 121 DKPPPAMQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTLVSSTKTGFLERSGSKIYKV 180
Query: 181 GGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAA---ASAKNAVEHVDRSPSFVLGM 240
GGK Q +QT +SSSN++KSL+RESSNAA+A++A KNAVEHV +SP VLG+
Sbjct: 181 --GGKTQQSVQT-FKSSSNLRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLGV 240
Query: 241 NDEELKKIEYELDPFLPDPMPELDKQL-TTDQVEKKAVLDKEEAEAEKKLHHQQQPTNDT 300
N+E+LKKIE ELD LPDP PELDK+L TTDQV EK+LHH QP DT
Sbjct: 241 NEEDLKKIECELDLCLPDPRPELDKELSTTDQV-------------EKRLHH-HQPIQDT 300
Query: 301 EISKLVVSNKEVAETEISIEAD-AKSPIQEDENRERNQGEGEEEEEAAKEEEKPERTVVE 360
+I K+V SNK+V ET + E D AKS I EDEN+E+N+GEGEEE AKEEEKPER VE
Sbjct: 301 KIFKVVGSNKKVEETPGAAETDNAKSSIWEDENQEQNEGEGEEE---AKEEEKPERIEVE 360
Query: 361 KEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQKEAQDGQSFK 420
KE+V VV SEE+TNN NEE EKS T+ EG +VL+ KEA+DGQS K
Sbjct: 361 KEEVYGVVASEESTNNKNEE-----EKSHTDPIQ--------EGVIVLEHKEAEDGQSSK 420
Query: 421 EENPNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESPAMYNHVIEET 480
EEN NS+ EKE EATEK+A AAA AAA A KPRQGGPGRKESPA+YNHVIEET
Sbjct: 421 EENHNST-------EKEAEATEKVAAAAA--AAAEAAKPRQGGPGRKESPAVYNHVIEET 464
Query: 481 ASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
ASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 ASKLLEKRKNKVRALAGAFQTVIDYESSSK 464
BLAST of Lcy01g010920 vs. NCBI nr
Match:
KAG6598809.1 (hypothetical protein SDJN03_08587, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 493.4 bits (1269), Expect = 2.3e-135
Identity = 334/511 (65.36%), Postives = 376/511 (73.58%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRAPSTDQKLSSLP----FS 60
MAT++AKESCGLGKERKI SVT+PN + + TPKSSPR STDQKLSS P S
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNLNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSAPSLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNRRRS 120
SSSS SLS +KHVPNYLKSTASSRHDH +FKPIKK + PAPIPEGKPSLNRRRS
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDH--NFKPIKK--SGGPAPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPSSTTILSSSAKVLERSSSKNSK 180
FDKPPP RL KPFRSP PRNRAAH PVRSSSFGAKPS++ + S+ LERS SK K
Sbjct: 121 FDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTSIVSSTKTGFLERSGSKIYK 180
Query: 181 VGGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAA---ASAKNAVEHVDRSPSFVLG 240
V GGK Q +QT ++SSSNV+KSL+RESSNAA+A++A KNAVEHV ++P VLG
Sbjct: 181 V--GGKTQQSVQT-LKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQTPVLVLG 240
Query: 241 MNDEELKKIEYELDPFLPDPMPELDKQL-TTDQVEKKAVLDKEEAEAEKKLHHQQQPTND 300
N+E+LKKIE ELD LPDP PELDK+L TTDQV EK+LHH QP D
Sbjct: 241 ANEEDLKKIECELDLCLPDPRPELDKELSTTDQV-------------EKRLHH-HQPIQD 300
Query: 301 TEISKLVVSNKEVAETEISIEAD-AKSPIQEDENRERNQGEGEEEEEAAKEEEKPERTVV 360
T+I K+V SNK+V ET + E D AKS I+EDENRE+N+GEGEEE AKEEEKPER V
Sbjct: 301 TKIFKVVGSNKKVEETPGAAETDNAKSSIREDENREQNEGEGEEE---AKEEEKPERIEV 360
Query: 361 EKEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQKEAQDGQSF 420
EKE+V VV SEE+TNN NEE EKS T+ EG +VL+ KE +DGQS
Sbjct: 361 EKEEVFGVVASEESTNNKNEE-----EKSHTDPIQ--------EGVIVLEHKEVEDGQSS 420
Query: 421 KEENPNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESPAMYNHVIEE 480
KEEN NS+ EKE EATEK+A AA A AAA KPRQGGPGRKESPA+YNHVIEE
Sbjct: 421 KEENHNST-------EKEAEATEKVAAAATAAAEAAAAKPRQGGPGRKESPAVYNHVIEE 467
Query: 481 TASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
TASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 TASKLLEKRKNKVRALAGAFQTVIDYESSSK 467
BLAST of Lcy01g010920 vs. NCBI nr
Match:
KAG7029749.1 (hypothetical protein SDJN02_08091, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 492.7 bits (1267), Expect = 3.8e-135
Identity = 334/511 (65.36%), Postives = 375/511 (73.39%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRAPSTDQKLSSLP----FS 60
MAT++AKESCGLGKERKI SVT+PN + + TPKSSPR STDQKLSS P S
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNLNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSAPSLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNRRRS 120
SSSS SLS +KHVPNYLKSTASSRHDH +FKPIKK + PAPIPEGKPSLNRRRS
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDH--NFKPIKK--SGGPAPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPSSTTILSSSAKVLERSSSKNSK 180
FDKPPP RL KPFRSP PRNRAAH PVRSSSFGAKPS++ + S+ LERS SK K
Sbjct: 121 FDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTSIVSSTKTGFLERSGSKIYK 180
Query: 181 VGGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAA---ASAKNAVEHVDRSPSFVLG 240
V GGK Q +QT ++SSSNV+KSL+RESSNAA+A++A KNAVEHV ++P VLG
Sbjct: 181 V--GGKTQQSVQT-LKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQTPVLVLG 240
Query: 241 MNDEELKKIEYELDPFLPDPMPELDKQL-TTDQVEKKAVLDKEEAEAEKKLHHQQQPTND 300
N+E+LKKIE ELD LPDP PELDK+L TTDQV EK+LHH QP D
Sbjct: 241 ANEEDLKKIECELDLCLPDPRPELDKELSTTDQV-------------EKRLHH-HQPIQD 300
Query: 301 TEISKLVVSNKEVAETEISIEAD-AKSPIQEDENRERNQGEGEEEEEAAKEEEKPERTVV 360
T+I K+V SNK+V ET + E D AKS IQEDENRE+N+GEGEEE AKEEEKPER V
Sbjct: 301 TKIFKVVGSNKKVEETPGAAETDNAKSSIQEDENREQNEGEGEEE---AKEEEKPERIEV 360
Query: 361 EKEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQKEAQDGQSF 420
EKE+V VV SEE+ NN NEE EKS T+ EG +VL+ KE +DGQS
Sbjct: 361 EKEEVFGVVASEESRNNKNEE-----EKSHTDPIQ--------EGVIVLEHKEVEDGQSS 420
Query: 421 KEENPNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESPAMYNHVIEE 480
KEEN NS+ EKE EATEK+A AA A AAA KPRQGGPGRKESPA+YNHVIEE
Sbjct: 421 KEENHNST-------EKEAEATEKVAAAATATAEAAAAKPRQGGPGRKESPAVYNHVIEE 467
Query: 481 TASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
TASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 TASKLLEKRKNKVRALAGAFQTVIDYESSSK 467
BLAST of Lcy01g010920 vs. NCBI nr
Match:
XP_023546370.1 (cell wall protein RBR3-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 492.3 bits (1266), Expect = 5.0e-135
Identity = 337/512 (65.82%), Postives = 377/512 (73.63%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRAPSTDQKLSSLP----FS 60
MAT++AKESCGLGKERKI SVT+PN + + TPKSSPR STDQKLSS P S
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNVNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSAPSLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNRRRS 120
SSSS SLS +KHVPNYLKSTASSRHDH +FKPIKK +A P PIPEGKPSLNRRRS
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDH--NFKPIKK--SAGPTPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPSSTTILSSSAKVLERSSSKNSK 180
FDKPPP RL KPFRSP PRNRAAH PVRSSSFGAKPS+T + S+ LERS SK K
Sbjct: 121 FDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTTIVSSTKTGFLERSGSKIYK 180
Query: 181 VGGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAA---ASAKNAVEHVDRSPSFVLG 240
V GGK Q +QT ++SSSNV+KSL+RESSNAA+A++A KNAVEHV +SP VLG
Sbjct: 181 V--GGKTQQSVQT-LKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLG 240
Query: 241 MNDEELKKIEYELDPFLPDPMPELDKQL-TTDQVEKKAVLDKEEAEAEKKLHHQQQPTND 300
N+E+LKKIE ELD LPDP PELDK+L TTDQV EK+LHH QP D
Sbjct: 241 ANEEDLKKIECELDLCLPDPRPELDKELSTTDQV-------------EKRLHH-HQPIQD 300
Query: 301 TEISKLVVSNKEVAETEISIEAD-AKSPIQEDENRERNQGEGEEEEEAAKEEEKPERTVV 360
T+I K+V SNK+V ET + E D AKS I+EDENRE+N+GEGEEE AKEEEKPER V
Sbjct: 301 TKIFKVVGSNKKVEETPGAAETDNAKSSIREDENREQNEGEGEEE---AKEEEKPERIEV 360
Query: 361 EKEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQKEAQDGQSF 420
EKE+V VV SEE+TNN NEE EKS T+ G +VL+ KE +DGQS
Sbjct: 361 EKEEVFGVVASEESTNNKNEE-----EKSHTDPIQ--------VGVIVLEHKEVEDGQSS 420
Query: 421 KEENPNSSPAKAETPEKETEATEKMAVAAAEKAA-AAAGKPRQGGPGRKESPAMYNHVIE 480
KEEN NS+ EKE EATEK+A AAA AA AAA KPRQGGPGRKESPA+YNHVIE
Sbjct: 421 KEENHNST-------EKEAEATEKVAAAAAAAAAEAAAAKPRQGGPGRKESPAVYNHVIE 468
Query: 481 ETASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
ETASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 ETASKLLEKRKNKVRALAGAFQTVIDYESSSK 468
BLAST of Lcy01g010920 vs. NCBI nr
Match:
XP_022962060.1 (neurofilament medium polypeptide-like [Cucurbita moschata])
HSP 1 Score: 491.5 bits (1264), Expect = 8.6e-135
Identity = 334/511 (65.36%), Postives = 375/511 (73.39%), Query Frame = 0
Query: 1 MATTKAKESCGLGKERKI----SVTVPNHTPTKRSTPKSSPRAPSTDQKLSSLP----FS 60
MAT++AKESCGLGKERKI SVT+PN + + TPKSSPR STDQKLSS P S
Sbjct: 1 MATSRAKESCGLGKERKITAPSSVTIPNLNTSTKRTPKSSPRGISTDQKLSSFPSSPSSS 60
Query: 61 SSSSAPSLSTHTEKHVPNYLKSTASSRHDHSSSFKPIKKTTTAAPAPIPEGKPSLNRRRS 120
SSSS SLS +KHVPNYLKSTASSRHDH +FKPIKK + PAPIPEGKPSLNRRRS
Sbjct: 61 SSSSTHSLSILPQKHVPNYLKSTASSRHDH--NFKPIKK--SGGPAPIPEGKPSLNRRRS 120
Query: 121 FDKPPPTAPRLDKPFRSPGPRNRAAHVPVRSSSFGAKPSSTTILSSSAKVLERSSSKNSK 180
FDKPPP RL KPFRSP PRNRAAH PVRSSSFGAKPS++ + S+ LERS SK K
Sbjct: 121 FDKPPPATQRLGKPFRSPEPRNRAAHAPVRSSSFGAKPSTSIVSSTKTGFLERSGSKIYK 180
Query: 181 VGGGGKPLQPLQTMIRSSSNVKKSLRRESSNAAAAAAA---ASAKNAVEHVDRSPSFVLG 240
V GGK Q +QT ++SSSNV+KSL+RESSNAA+A++A KNAVEHV +SP VLG
Sbjct: 181 V--GGKTQQSVQT-LKSSSNVRKSLKRESSNAASASSAEMVPKTKNAVEHVGQSPVLVLG 240
Query: 241 MNDEELKKIEYELDPFLPDPMPELDKQL-TTDQVEKKAVLDKEEAEAEKKLHHQQQPTND 300
N+E+LKKIE ELD LPDP PELDK+L TTDQV EK+LHH QP +
Sbjct: 241 ANEEDLKKIECELDLCLPDPRPELDKELSTTDQV-------------EKRLHH-HQPIQE 300
Query: 301 TEISKLVVSNKEVAETEISIEAD-AKSPIQEDENRERNQGEGEEEEEAAKEEEKPERTVV 360
T+I K+V SNK+V ET + E D AKS I+EDENRE+N+GEGEEE AKEEEKPER V
Sbjct: 301 TKIFKVVGSNKKVEETPGAAETDNAKSSIREDENREQNEGEGEEE---AKEEEKPERIEV 360
Query: 361 EKEDVVAVVTSEENTNNNNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQKEAQDGQSF 420
EKE+V VV SEE+TNN NEE EKS T EG +VL+ KEA+DGQS
Sbjct: 361 EKEEVFGVVASEESTNNKNEE-----EKSHTVPIQ--------EGVIVLEHKEAEDGQSS 420
Query: 421 KEENPNSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESPAMYNHVIEE 480
KEEN S+ EKETEATEK+A AA A A A KPRQGGPGRKESPA+YNHVIEE
Sbjct: 421 KEENHTST-------EKETEATEKVAAAATSAAEAVAAKPRQGGPGRKESPAVYNHVIEE 467
Query: 481 TASKLLEKRKNKVRALAGAFQTVIDYESSSK 499
TASKLLEKRKNKVRALAGAFQTVIDYESSSK
Sbjct: 481 TASKLLEKRKNKVRALAGAFQTVIDYESSSK 467
BLAST of Lcy01g010920 vs. TAIR 10
Match:
AT5G24880.1 (BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (TAIR:AT5G10660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 64.3 bits (155), Expect = 3.1e-10
Identity = 149/494 (30.16%), Postives = 221/494 (44.74%), Query Frame = 0
Query: 28 TKRSTPKSSP------RAPSTDQKLSSLPFSSSSSAPSLSTHTEKHVPNYLKSTASSRHD 87
T ST K+ P R S +K ++SS S EK +PNYLK T SSR D
Sbjct: 3 TTSSTTKAKPDNQNLSRTKSLGRKPKQPLSTASSEDGSSDQKPEKPLPNYLKPTISSRPD 62
Query: 88 HSSSFKPIKKTTTAAPAPIPEGKPSLNRRRSFDKPPPTAPRLDKPFRSPGPR-NRAAHV- 147
+ K +KK + + L RRRSFD+PP + L P S PR ++ +V
Sbjct: 63 ---AGKLLKKNNNSL-----DDNQKLLRRRSFDRPPSS---LTSPSTSASPRIQKSLNVS 122
Query: 148 PVRSSSFGAKP--SSTTILSSSAKVLERSSSKNSKVGGG---GKPLQPLQTMIRSSSNVK 207
P RS A P T L SS+ S+N GG P+ P ++ + SSS
Sbjct: 123 PSRSRDRPAVPREKPVTALRSSS----FHGSRNVPKGGNTAKSPPVAPKKSGLNSSSTSS 182
Query: 208 KSLRRESSNAAAAAAAASAKNAVEHVDRSPSFVLGMNDEELKKIEYELDPFLPDPMPELD 267
KS ++E S A+ + A++ S S + EE+ K+E D + D
Sbjct: 183 KS-KKEGSENVRIKKASDKEIALD--SASMSSAQEDHQEEILKVE-------SDHLQVSD 242
Query: 268 KQLTTDQVEK-KAVLDKEEAEAEKKLHHQQQPTNDTEISKLVVS--NKEVAETE---ISI 327
+ + EK + + ++ +A + + + + + T ++ V N VAE E I
Sbjct: 243 HDIEEPKYEKEEKEVQEKVVQANESVEEKAESSGPTPVASPVGKDCNAVVAELEEKLIKN 302
Query: 328 EADAKSPIQEDENRERNQGEGEEEEEAAK----EEEKPERTVVEKEDVVAVVTSEENTNN 387
E D + +E + ++ NQ EEEE K E E PE+ E ++V +V E T
Sbjct: 303 EDDIEEKTEEMKEQDNNQANKSEEEEDVKKKIDENETPEKVDTESKEVESV----EETTQ 362
Query: 388 NNEEKMVTDEKSETETETDPGVSEGGEGAVVLDQKEAQDGQSFKEENPNSSPAKAETPEK 447
EE++ + K E E +K +D Q K E K + ++
Sbjct: 363 EKEEEVKEEGKERVEEEEKE------------KEKVKEDDQKEKVEEEEKEKVKGDEEKE 422
Query: 448 ETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESPAMYNHVIEETASKLLEK-RKNKVRAL 498
+ + E +A GK ++ G+KESP+ YN VI ASK+ E RKNKV AL
Sbjct: 423 KVKEEE-----------SAEGKKKEVVKGKKESPSAYNDVI---ASKMQENPRKNKVLAL 441
BLAST of Lcy01g010920 vs. TAIR 10
Match:
AT5G10660.1 (calmodulin-binding protein-related )
HSP 1 Score: 52.0 bits (123), Expect = 1.6e-06
Identity = 72/206 (34.95%), Postives = 104/206 (50.49%), Query Frame = 0
Query: 303 ETEISIEADAKSPIQEDENRERNQGEGEEEEE----AAKEEEKPERTVVEKEDVVAVVTS 362
ET++ I + P +ED+++ E EE+E AA EE+ + E + +
Sbjct: 213 ETDVHISDHGEEPKEEDKDQFAQPDESGEEKETSPVAASTEEQKGELIDEDKSTEQIEEP 272
Query: 363 EENTN---NNNEEKMVTDEKSETE--TETDPGVSEGGEGAVVLDQKEAQDGQS-FKEENP 422
+E N NN+EE+ +KS+ E +ET ++ E V + KE + ++ KEE
Sbjct: 273 KEPENIEENNSEEEEEVKKKSDDEENSETVATTTDMNEAVNVEESKEEEKEEAEVKEEEG 332
Query: 423 NSSPAKAETPEKETEATEKMAVAAAEKAAAAAGKPRQGGPGRKESPAMYNHVIEETASKL 482
SS AK ET E + E G + G+KESP YN VI ASK+
Sbjct: 333 ESSAAKEETTETMAQVEE----------LPEEGTKNEVVQGKKESPTAYNDVI---ASKM 392
Query: 483 LE-KRKNKVRALAGAFQTVIDYESSS 498
E +KNKV ALAGAFQTVIDYE+++
Sbjct: 393 QENSKKNKVLALAGAFQTVIDYETAA 405
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1K599 | 8.4e-136 | 66.08 | microtubule-associated protein RP/EB family member 1-like OS=Cucurbita maxima OX... | [more] |
A0A6J1HE16 | 4.1e-135 | 65.36 | neurofilament medium polypeptide-like OS=Cucurbita moschata OX=3662 GN=LOC111462... | [more] |
A0A1S3BBU4 | 6.6e-125 | 61.92 | serine/arginine repetitive matrix protein 1 OS=Cucumis melo OX=3656 GN=LOC103488... | [more] |
A0A5A7VBK4 | 1.1e-124 | 61.69 | Serine/arginine repetitive matrix protein 1 OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A0A0LS85 | 8.1e-123 | 59.89 | CaM_binding domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G378000... | [more] |
Match Name | E-value | Identity | Description | |
XP_022997522.1 | 1.7e-135 | 66.08 | microtubule-associated protein RP/EB family member 1-like [Cucurbita maxima] | [more] |
KAG6598809.1 | 2.3e-135 | 65.36 | hypothetical protein SDJN03_08587, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7029749.1 | 3.8e-135 | 65.36 | hypothetical protein SDJN02_08091, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_023546370.1 | 5.0e-135 | 65.82 | cell wall protein RBR3-like [Cucurbita pepo subsp. pepo] | [more] |
XP_022962060.1 | 8.6e-135 | 65.36 | neurofilament medium polypeptide-like [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT5G24880.1 | 3.1e-10 | 30.16 | BEST Arabidopsis thaliana protein match is: calmodulin-binding protein-related (... | [more] |
AT5G10660.1 | 1.6e-06 | 34.95 | calmodulin-binding protein-related | [more] |