Lcy01g009680 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g009680
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr01: 28391199 .. 28391768 (+)
RNA-Seq Expression	Lcy01g009680
Synteny	Lcy01g009680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTGTGTTGAATCGGTTAGATACTCGGTGCTTCTTAACGGGAGCCCCCAGGAAGAATTTAAGCCTCTCAGGGGAATCAGACAAGGAGACCCTCTGTCTCCATACCTTTTCCTCCTTTGTGCAGAGGACCTGTCCGCCTTACTTAACGGGGAAGAGTTTCAAAACTATATTTCTGGTATTCGCATTAATAATCACTGCCCTACTCTTACTCACCTATTTTTTGCAGATAACAACTTAATTTTCTTCAAGGCCTCCAAGGAAGAAGCAACCAGAGTCAAAGGGGTGTTGGACACTTATGACAAGGCATCGGGCCAGAAGATAAACCTAGAGAAATTTGTCTTCATGACGAGCCAAAATGTGGAAGAGAGCAGGGTCGGGGAGATTAGCACGGTCCTGGGGTTTAAGAGGTCCAAGTGCCTTGGCCATTACCTAGGCCTCCCAGCGCAGTCGGGAAAAAGAAAGTCCTCCCTCTTCAATAAGCTTAAGGAAAGAATCTGGAAAGTGCTTCAAGGGTGGAAAGGGAAGCTTTTTCCATGGGAGGCAAAGAGGTCCTCATTAAATCTATAA

mRNA sequence

ATGAACTGTGTTGAATCGGTTAGATACTCGGTGCTTCTTAACGGGAGCCCCCAGGAAGAATTTAAGCCTCTCAGGGGAATCAGACAAGGAGACCCTCTGTCTCCATACCTTTTCCTCCTTTGTGCAGAGGACCTGTCCGCCTTACTTAACGGGGAAGAGTTTCAAAACTATATTTCTGGTATTCGCATTAATAATCACTGCCCTACTCTTACTCACCTATTTTTTGCAGATAACAACTTAATTTTCTTCAAGGCCTCCAAGGAAGAAGCAACCAGAGTCAAAGGGGTGTTGGACACTTATGACAAGGCATCGGGCCAGAAGATAAACCTAGAGAAATTTGTCTTCATGACGAGCCAAAATGTGGAAGAGAGCAGGGTCGGGGAGATTAGCACGGTCCTGGGGTTTAAGAGGTCCAAGTGCCTTGGCCATTACCTAGGCCTCCCAGCGCAGTCGGGAAAAAGAAAGTCCTCCCTCTTCAATAAGCTTAAGGAAAGAATCTGGAAAGTGCTTCAAGGGTGGAAAGGGAAGCTTTTTCCATGGGAGGCAAAGAGGTCCTCATTAAATCTATAA

Coding sequence (CDS)

ATGAACTGTGTTGAATCGGTTAGATACTCGGTGCTTCTTAACGGGAGCCCCCAGGAAGAATTTAAGCCTCTCAGGGGAATCAGACAAGGAGACCCTCTGTCTCCATACCTTTTCCTCCTTTGTGCAGAGGACCTGTCCGCCTTACTTAACGGGGAAGAGTTTCAAAACTATATTTCTGGTATTCGCATTAATAATCACTGCCCTACTCTTACTCACCTATTTTTTGCAGATAACAACTTAATTTTCTTCAAGGCCTCCAAGGAAGAAGCAACCAGAGTCAAAGGGGTGTTGGACACTTATGACAAGGCATCGGGCCAGAAGATAAACCTAGAGAAATTTGTCTTCATGACGAGCCAAAATGTGGAAGAGAGCAGGGTCGGGGAGATTAGCACGGTCCTGGGGTTTAAGAGGTCCAAGTGCCTTGGCCATTACCTAGGCCTCCCAGCGCAGTCGGGAAAAAGAAAGTCCTCCCTCTTCAATAAGCTTAAGGAAAGAATCTGGAAAGTGCTTCAAGGGTGGAAAGGGAAGCTTTTTCCATGGGAGGCAAAGAGGTCCTCATTAAATCTATAA

Protein sequence

MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISGIRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEKFVFMTSQNVEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGKLFPWEAKRSSLNL

Homology

[Close]

BLAST of Lcy01g009680 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.0e-14
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 12 LLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISGIRINNHCPTLT 71
          ++NG+PQ    P RG+RQGDPLSPYLF+LC E LS L    + Q  + GIR++N+ P + 
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 72 HLFFADN 79
          HL FAD+
Sbjct: 73 HLLFADD 79

[Close]

BLAST of Lcy01g009680 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.3e-06
Identity = 48/176 (27.27%), Postives = 79/176 (44.89%), Query Frame = 0


Query: 10  SVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISGIRINNHCPT 69
           ++ +NG   E      G RQG PLSPYLF +  E L+  +     Q  I GI+I      
Sbjct: 647 NIKVNGEKLEAIPLKSGTRQGCPLSPYLFNIVLEVLARAIRQ---QKEIKGIQIGKEEVK 706

Query: 70  LTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEK-FVFMTSQNVEESRVGE 129
           ++ L  AD+ +++    K     +  +++++ +  G KIN  K   F+ ++N +  +  E
Sbjct: 707 ISLL--ADDMIVYISDPKNSTRELLNLINSFGEVVGYKINSNKSMAFLYTKNKQAEK--E 766

Query: 130 ISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNK----LKERIWKVLQGWKGKLFPW 181
           I     F        YLG+     K    L++K    LK+ I + L+ WK     W
Sbjct: 767 IRETTPFSIVTNNIKYLGVTLT--KEVKDLYDKNFKSLKKEIKEDLRRWKDLPCSW 813

[Close]

BLAST of Lcy01g009680 vs. ExPASy TrEMBL
Match: A0A6J1DUG8 (uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024135 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.8e-54
Identity = 101/179 (56.42%), Postives = 137/179 (76.54%), Query Frame = 0


Query: 1   MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
           MNCVESVR++VL+NG P +EF P RG+RQGDPLSPYLF++CAE LSAL+N EE +  I+ 
Sbjct: 427 MNCVESVRFAVLINGVPGDEFTPNRGLRQGDPLSPYLFIMCAEGLSALINDEEKKGNITR 486

Query: 61  IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKA-SGQKINLEKFVFMTSQ 120
           ++IN  CP ++HLF+AD+ L+FFKAS      +KG+L++Y+KA SGQ INL+K +F+ S+
Sbjct: 487 LKINRRCPPISHLFYADDCLLFFKASTGNCRSIKGILESYEKASSGQCINLDKSMFIVSK 546

Query: 121 NVEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGKLF 179
           N +E  VG I   L    ++ LG YLGLP+Q+G+ K  +FN +K+R+WK LQGWKGKLF
Sbjct: 547 NTKEQMVGVIRQELMVNHTESLGQYLGLPSQTGRNKRQVFNNIKDRVWKALQGWKGKLF 605

[Close]

BLAST of Lcy01g009680 vs. ExPASy TrEMBL
Match: F4NCI4 (Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 3.5e-42
Identity = 83/176 (47.16%), Postives = 117/176 (66.48%), Query Frame = 0


Query: 1   MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
           MNCV S R+SVL+NG P   F P RG+RQGDPLSP+LF++CAE LS LL   E +  I G
Sbjct: 616 MNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHG 675

Query: 61  IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEKFVFMTSQN 120
           ++I +    ++HLFFAD++L+F +A++EE   V  +L TY+ ASGQK+N+EK     S+N
Sbjct: 676 VKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRN 735

Query: 121 VEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGK 177
           +E  ++  +   L FK  +    YLGLP   G  K  +F  +++R+WK L+GWKGK
Sbjct: 736 LEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGK 791

[Close]

BLAST of Lcy01g009680 vs. ExPASy TrEMBL
Match: A0A392N7V7 (Reverse transcriptase domain-containing protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0016061 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.9e-41
Identity = 81/176 (46.02%), Postives = 118/176 (67.05%), Query Frame = 0


Query: 1   MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
           M CV +V +S+L+NG P  +F P RGIRQGDPLSPYLF+LC + LS +++  + +N I+G
Sbjct: 98  MRCVSTVSFSILVNGKPSHQFTPKRGIRQGDPLSPYLFILCVDVLSRMISHMQDKNLING 157

Query: 61  IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEKFVFMTSQN 120
           I I N+ P ++HLFFAD++LIF KA+KEEAT +  VL+ Y + SGQKINL+K       N
Sbjct: 158 IAIANNAPKISHLFFADDSLIFCKANKEEATHLMAVLEEYQRVSGQKINLDKSEMTFCPN 217

Query: 121 VEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGK 177
           +++    E   V+  + +  +  YLG+P Q G+ K  +F  + +R+W  L+GWK K
Sbjct: 218 IQQGIKAEFQAVIPIQVTDNITKYLGMPTQIGRSKQGVFKFIMDRVWSKLKGWKEK 273

[Close]

BLAST of Lcy01g009680 vs. ExPASy TrEMBL
Match: A0A2N9F9I5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11391 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.9e-41
Identity = 83/177 (46.89%), Postives = 116/177 (65.54%), Query Frame = 0


Query: 1    MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
            M CV SV YS+L+NG P+  F P RG+RQGDP+SPYLFLLCAE L+ALL        I G
Sbjct: 957  MECVRSVSYSILINGEPRGFFHPTRGLRQGDPISPYLFLLCAEGLNALLAKAALSKKIQG 1016

Query: 61   IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEKFVFMTSQN 120
            I I+   P LTHLFFAD++++F +A+  E   ++ +L TY++ SGQ++N +K     S +
Sbjct: 1017 ISISRGGPKLTHLFFADDSVLFCRATLHECNAIQDILRTYERVSGQQVNQDKTTLFFSSS 1076

Query: 121  VEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGKL 178
              E+   EI   LG    +   +YLGLP+  G+ K + F +LK+R+W+ +QGWKGKL
Sbjct: 1077 TREAIQNEIKDALGLPAIRQYENYLGLPSMVGRAKYNSFTQLKDRVWRKIQGWKGKL 1133

[Close]

BLAST of Lcy01g009680 vs. ExPASy TrEMBL
Match: A0A2K3MXM6 (Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g018756 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 3.8e-41
Identity = 80/176 (45.45%), Postives = 121/176 (68.75%), Query Frame = 0


Query: 1   MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
           M CV +V++S+L+NG P +EF P RG+RQGDPLSPYLF++CA+ LS L++  + +  I G
Sbjct: 429 MKCVTTVKFSILINGYPSQEFYPQRGLRQGDPLSPYLFIICADVLSGLISRAQQEKLIHG 488

Query: 61  IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEKFVFMTSQN 120
           IRI+   P ++HLFFAD++L+F +A+ +E + ++ ++ TY KASGQ +NL K   + S+ 
Sbjct: 489 IRISQGAPEISHLFFADDSLMFCRATNKEVSTIQDIIQTYQKASGQLVNLTKSEMVFSKG 548

Query: 121 VEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGK 177
           V      EIS +L  + S+    YLG+P   G+ K  +FN ++E+IWK L+GWK K
Sbjct: 549 VTNGIKEEISRILPMQISEYFSKYLGMPIVHGRSKQQIFNYIREKIWKKLKGWKEK 604

[Close]

BLAST of Lcy01g009680 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia])

HSP 1 Score: 220.3 bits (560), Expect = 1.4e-53
Identity = 101/179 (56.42%), Postives = 137/179 (76.54%), Query Frame = 0


Query: 1   MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
           MNCVESVR++VL+NG P +EF P RG+RQGDPLSPYLF++CAE LSAL+N EE +  I+ 
Sbjct: 427 MNCVESVRFAVLINGVPGDEFTPNRGLRQGDPLSPYLFIMCAEGLSALINDEEKKGNITR 486

Query: 61  IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKA-SGQKINLEKFVFMTSQ 120
           ++IN  CP ++HLF+AD+ L+FFKAS      +KG+L++Y+KA SGQ INL+K +F+ S+
Sbjct: 487 LKINRRCPPISHLFYADDCLLFFKASTGNCRSIKGILESYEKASSGQCINLDKSMFIVSK 546

Query: 121 NVEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGKLF 179
           N +E  VG I   L    ++ LG YLGLP+Q+G+ K  +FN +K+R+WK LQGWKGKLF
Sbjct: 547 NTKEQMVGVIRQELMVNHTESLGQYLGLPSQTGRNKRQVFNNIKDRVWKALQGWKGKLF 605

[Close]

BLAST of Lcy01g009680 vs. NCBI nr
Match: CCA66036.1 (hypothetical protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 181.4 bits (459), Expect = 7.2e-42
Identity = 83/176 (47.16%), Postives = 117/176 (66.48%), Query Frame = 0


Query: 1   MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
           MNCV S R+SVL+NG P   F P RG+RQGDPLSP+LF++CAE LS LL   E +  I G
Sbjct: 616 MNCVTSARFSVLVNGQPSRNFFPSRGLRQGDPLSPFLFVVCAEGLSTLLRDAEEKKVIHG 675

Query: 61  IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEKFVFMTSQN 120
           ++I +    ++HLFFAD++L+F +A++EE   V  +L TY+ ASGQK+N+EK     S+N
Sbjct: 676 VKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDILSTYEAASGQKLNMEKSEMSYSRN 735

Query: 121 VEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGK 177
           +E  ++  +   L FK  +    YLGLP   G  K  +F  +++R+WK L+GWKGK
Sbjct: 736 LEPDKINTLQMKLAFKTVEGHEKYLGLPTFIGSSKKRVFQAIQDRVWKKLKGWKGK 791

[Close]

BLAST of Lcy01g009680 vs. NCBI nr
Match: XP_030923330.1 (uncharacterized protein LOC115950239 [Quercus lobata])

HSP 1 Score: 179.5 bits (454), Expect = 2.7e-41
Identity = 86/177 (48.59%), Postives = 117/177 (66.10%), Query Frame = 0


Query: 1    MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
            M+CV +  +S+L+NG P E  +P RGIRQGDP+SPYLFLLCAE L+ALLN  E    I+G
Sbjct: 1008 MSCVTTPSFSILVNGKPYEMIQPSRGIRQGDPISPYLFLLCAEGLTALLNKAELNGMITG 1067

Query: 61   IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEKFVFMTSQN 120
            + I    P +T+L FAD++L+F +A++ E   +  +L  Y++ASGQ INLEK     S N
Sbjct: 1068 VSICRGAPKITNLMFADDSLLFCQATRAEGETIAEILQIYERASGQSINLEKSSAYFSTN 1127

Query: 121  VEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGKL 178
              E + G+I  +LG K       YLGLP   G+ K + F++LK+R+WK LQGWKG L
Sbjct: 1128 TSEGQKGQILEILGVKEVDRFVKYLGLPTLIGRAKYNTFSELKDRVWKKLQGWKGML 1184

[Close]

BLAST of Lcy01g009680 vs. NCBI nr
Match: MCH95088.1 (hypothetical protein [Trifolium medium])

HSP 1 Score: 178.3 bits (451), Expect = 6.1e-41
Identity = 81/176 (46.02%), Postives = 118/176 (67.05%), Query Frame = 0


Query: 1   MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
           M CV +V +S+L+NG P  +F P RGIRQGDPLSPYLF+LC + LS +++  + +N I+G
Sbjct: 98  MRCVSTVSFSILVNGKPSHQFTPKRGIRQGDPLSPYLFILCVDVLSRMISHMQDKNLING 157

Query: 61  IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEKFVFMTSQN 120
           I I N+ P ++HLFFAD++LIF KA+KEEAT +  VL+ Y + SGQKINL+K       N
Sbjct: 158 IAIANNAPKISHLFFADDSLIFCKANKEEATHLMAVLEEYQRVSGQKINLDKSEMTFCPN 217

Query: 121 VEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGK 177
           +++    E   V+  + +  +  YLG+P Q G+ K  +F  + +R+W  L+GWK K
Sbjct: 218 IQQGIKAEFQAVIPIQVTDNITKYLGMPTQIGRSKQGVFKFIMDRVWSKLKGWKEK 273

[Close]

BLAST of Lcy01g009680 vs. NCBI nr
Match: PNX95563.1 (ribonuclease H, partial [Trifolium pratense])

HSP 1 Score: 177.9 bits (450), Expect = 8.0e-41
Identity = 80/176 (45.45%), Postives = 121/176 (68.75%), Query Frame = 0


Query: 1   MNCVESVRYSVLLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISG 60
           M CV +V++S+L+NG P +EF P RG+RQGDPLSPYLF++CA+ LS L++  + +  I G
Sbjct: 429 MKCVTTVKFSILINGYPSQEFYPQRGLRQGDPLSPYLFIICADVLSGLISRAQQEKLIHG 488

Query: 61  IRINNHCPTLTHLFFADNNLIFFKASKEEATRVKGVLDTYDKASGQKINLEKFVFMTSQN 120
           IRI+   P ++HLFFAD++L+F +A+ +E + ++ ++ TY KASGQ +NL K   + S+ 
Sbjct: 489 IRISQGAPEISHLFFADDSLMFCRATNKEVSTIQDIIQTYQKASGQLVNLTKSEMVFSKG 548

Query: 121 VEESRVGEISTVLGFKRSKCLGHYLGLPAQSGKRKSSLFNKLKERIWKVLQGWKGK 177
           V      EIS +L  + S+    YLG+P   G+ K  +FN ++E+IWK L+GWK K
Sbjct: 549 VTNGIKEEISRILPMQISEYFSKYLGMPIVHGRSKQQIFNYIREKIWKKLKGWKEK 604

[Close]

BLAST of Lcy01g009680 vs. TAIR 10
Match: ATMG01250.1 (RNA-directed DNA polymerase (reverse transcriptase) )

HSP 1 Score: 81.6 bits (200), Expect = 7.2e-16
Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 12 LLNGSPQEEFKPLRGIRQGDPLSPYLFLLCAEDLSALLNGEEFQNYISGIRINNHCPTLT 71
          ++NG+PQ    P RG+RQGDPLSPYLF+LC E LS L    + Q  + GIR++N+ P + 
Sbjct: 13 IINGAPQGLVTPSRGLRQGDPLSPYLFILCTEVLSGLCRRAQEQGRLPGIRVSNNSPRIN 72

Query: 72 HLFFADN 79
          HL FAD+
Sbjct: 73 HLLFADD 79

The following BLAST results are available for this feature:

BLAST of Lcy01g009680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92555	1.0e-14	52.24	Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 ...	[more]
P11369	1.3e-06	27.27	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]

BLAST of Lcy01g009680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUG8	6.8e-54	56.42	uncharacterized protein LOC111024135 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
F4NCI4	3.5e-42	47.16	Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris...	[more]
A0A392N7V7	2.9e-41	46.02	Reverse transcriptase domain-containing protein (Fragment) OS=Trifolium medium O...	[more]
A0A2N9F9I5	2.9e-41	46.89	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11391 PE=3 SV=1	[more]
A0A2K3MXM6	3.8e-41	45.45	Ribonuclease H (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g018756 PE=4 SV...	[more]

BLAST of Lcy01g009680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022157437.1	1.4e-53	56.42	uncharacterized protein LOC111024135 [Momordica charantia]	[more]
CCA66036.1	7.2e-42	47.16	hypothetical protein [Beta vulgaris subsp. vulgaris]	[more]
XP_030923330.1	2.7e-41	48.59	uncharacterized protein LOC115950239 [Quercus lobata]	[more]
MCH95088.1	6.1e-41	46.02	hypothetical protein [Trifolium medium]	[more]
PNX95563.1	8.0e-41	45.45	ribonuclease H, partial [Trifolium pratense]	[more]

BLAST of Lcy01g009680 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG01250.1	7.2e-16	52.24	RNA-directed DNA polymerase (reverse transcriptase)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 3..132 e-value: 7.5E-14 score: 51.8
None	No IPR available	PANTHER	PTHR33116:SF45	SUBFAMILY NOT NAMED	coord: 1..178
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g009680.1	Lcy01g009680.1	mRNA