Lcy01g009190 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g009190
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr01: 25864874 .. 25866271 (-)
RNA-Seq Expression	Lcy01g009190
Synteny	Lcy01g009190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAAGGTAGGATCTAAAGCTGAGGAAAGTTGGAGCAGAGTCACTTATGAAAAGCTCCCAGAATTCTGCTACTGCTGTGGTCGGATTGGTCACGTTGCCAAGGACTGTGAAGAGGACGAAGTAAACAAAGCAGAGGAATATCAGTATGGCCCGTGGATGAGGGAAGATAATATTATCTGGGGGAAAAGCAAAGGTACGAAAGAGGAGGGAAGGAAAAGCCCGAAAGCTAATCTGAATGTCCGGAAAGGCAGAAACGGTGGGGAAGACTCTAAAAGCGAGGAAGAAGAAGAAGCGAGAGTGGAAGAGTTAGCTGATACAAGAGTGAGTTTCCCGGCGACAGCGCCTCCAAGAACGGTGGAGGAGCAGGGAAGCGGTGGGACGAAAAGGAAAAAAGAGTCGTTAGAGGACAACTCAAACAGAAGCCCAAGGAAAGGAATTGACATGTCAGGAGAGGTCAGTAATCATGATGAACAGTTTTCAGATGGGTCCCACAGAGGTATGGAAATAGAAAAAAAGGAGGCACAATCTGACAAAAAATGGGAGGAAATTTTGGAAGTGGCCGTTAGAAGATATCATGGGCCTATAAAGGCCCCATCTAGCCAAAGGGCCATGGGCTCTGGTAGTCAACCTGTCAGAAACAACCATGAAGAAGAAACGGTGCTGGCTAATCCTAATCAAGATGATCAAAAATACAAGGACACTAAGGGTGAAGAGTATCAGTGAAGGAAGCGAGAATTTAAACAAAAAAGGCATTAAGCACTGGAAGCGTAGAGCGAGAATGACTACTGACCCAGGGGAAGTCACAAACATGGAATGGTCTATCACTAACCATCCTAAGAGGACCAGAATTGAGGAAGAAATTGAAAGCAAGACCGTGAAGAGGCAATGCAACGATTACTCCGATAATGTAGGAGGGATATCGGCAGAGGCTGTGGGACAACCCCGCCGGACGCCATGAAAACATTATGTTGGAACATTCGAGGTGCGGGGAACCCTCGAGCGGTTCGTTTGCTGCGTTTGGTGGTGCGACAAAATTTCCCTAATTTAGTCTTTTTGTCTGAAACCAAGATTAAGGGTCTTTGCTCAAATAGTCTTAAGCTGAAGCTGGATTTTGATAATTGTTTTGAGGTTTCAAATGTTGGGCTTAGTGGTGGGTTGATGTTGCTTTGGAAGAAGGAGGTGCACGTTACTGTTAGGTCCTTCTCTAAGGGCCATATTGATGCCATTATCGAGTTGAATGAGGATAGGTGGAGATTTACTGGCTTTTATGGGAGTTCGGATAAGGACTGTAGAAGTGACTCGTTGGATCTTATTATACGCCTCCAAGCCATGGATGATCTTCCTTGGGTCTTGGGAGGAGATTTCAATGAGATCCTTTTTGGGAATGAGAAGTAG

mRNA sequence

ATGTTAAAGGTAGGATCTAAAGCTGAGGAAAGTTGGAGCAGAGTCACTTATGAAAAGCTCCCAGAATTCTGCTACTGCTGTGGTCGGATTGGTCACGTTGCCAAGGACTGTGAAGAGGACGAAGTAAACAAAGCAGAGGAATATCAGTATGGCCCGTGGATGAGGGAAGATAATATTATCTGGGGGAAAAGCAAAGGTACGAAAGAGGAGGGAAGGAAAAGCCCGAAAGCTAATCTGAATGTCCGGAAAGGCAGAAACGGTGGGGAAGACTCTAAAAGCGAGGAAGAAGAAGAAGCGAGAGTGGAAGAGTTAGCTGATACAAGAGTGAGTTTCCCGGCGACAGCGCCTCCAAGAACGGTGGAGGAGCAGGGAAGCGGTGGGACGAAAAGGAAAAAAGAGTCGTTAGAGGACAACTCAAACAGAAGCCCAAGGAAAGGAATTGACATGTCAGGAGAGGTCAGTAATCATGATGAACAGTTTTCAGATGGGTCCCACAGAGGTATGGAAATAGAAAAAAAGGAGGCACAATCTGACAAAAAATGGGAGGAAATTTTGGAAGTGGCCGTTAGAAGATATCATGGGCCTATAAAGGCCCCATCTAGCCAAAGGGCCATGGGCTCTGGTAGTCAACCTGTCAGAAACAACCATGAAGAAGAAACGGTGCTGGCTAATCCTAATCAAGATGATCAAAAATACAAGGACACTAAGGGTGAAGAGAGGGATATCGGCAGAGGCTGTGGGACAACCCCGCCGGACGCCATGAAAACATTATGTTGGAACATTCGAGGTGCGGGGAACCCTCGAGCGGTTCGTTTGCTGCGTTTGGTGGTGCGACAAAATTTCCCTAATTTAGTCTTTTTGTCTGAAACCAAGATTAAGGGTCTTTGCTCAAATAGTCTTAAGCTGAAGCTGGATTTTGATAATTGTTTTGAGGTTTCAAATGTTGGGCTTAGTGGTGGGTTGATGTTGCTTTGGAAGAAGGAGGTGCACGTTACTGTTAGGTCCTTCTCTAAGGGCCATATTGATGCCATTATCGAGTTGAATGAGGATAGGTGGAGATTTACTGGCTTTTATGGGAGTTCGGATAAGGACTGTAGAAGTGACTCGTTGGATCTTATTATACGCCTCCAAGCCATGGATGATCTTCCTTGGGTCTTGGGAGGAGATTTCAATGAGATCCTTTTTGGGAATGAGAAGTAG

Coding sequence (CDS)

ATGTTAAAGGTAGGATCTAAAGCTGAGGAAAGTTGGAGCAGAGTCACTTATGAAAAGCTCCCAGAATTCTGCTACTGCTGTGGTCGGATTGGTCACGTTGCCAAGGACTGTGAAGAGGACGAAGTAAACAAAGCAGAGGAATATCAGTATGGCCCGTGGATGAGGGAAGATAATATTATCTGGGGGAAAAGCAAAGGTACGAAAGAGGAGGGAAGGAAAAGCCCGAAAGCTAATCTGAATGTCCGGAAAGGCAGAAACGGTGGGGAAGACTCTAAAAGCGAGGAAGAAGAAGAAGCGAGAGTGGAAGAGTTAGCTGATACAAGAGTGAGTTTCCCGGCGACAGCGCCTCCAAGAACGGTGGAGGAGCAGGGAAGCGGTGGGACGAAAAGGAAAAAAGAGTCGTTAGAGGACAACTCAAACAGAAGCCCAAGGAAAGGAATTGACATGTCAGGAGAGGTCAGTAATCATGATGAACAGTTTTCAGATGGGTCCCACAGAGGTATGGAAATAGAAAAAAAGGAGGCACAATCTGACAAAAAATGGGAGGAAATTTTGGAAGTGGCCGTTAGAAGATATCATGGGCCTATAAAGGCCCCATCTAGCCAAAGGGCCATGGGCTCTGGTAGTCAACCTGTCAGAAACAACCATGAAGAAGAAACGGTGCTGGCTAATCCTAATCAAGATGATCAAAAATACAAGGACACTAAGGGTGAAGAGAGGGATATCGGCAGAGGCTGTGGGACAACCCCGCCGGACGCCATGAAAACATTATGTTGGAACATTCGAGGTGCGGGGAACCCTCGAGCGGTTCGTTTGCTGCGTTTGGTGGTGCGACAAAATTTCCCTAATTTAGTCTTTTTGTCTGAAACCAAGATTAAGGGTCTTTGCTCAAATAGTCTTAAGCTGAAGCTGGATTTTGATAATTGTTTTGAGGTTTCAAATGTTGGGCTTAGTGGTGGGTTGATGTTGCTTTGGAAGAAGGAGGTGCACGTTACTGTTAGGTCCTTCTCTAAGGGCCATATTGATGCCATTATCGAGTTGAATGAGGATAGGTGGAGATTTACTGGCTTTTATGGGAGTTCGGATAAGGACTGTAGAAGTGACTCGTTGGATCTTATTATACGCCTCCAAGCCATGGATGATCTTCCTTGGGTCTTGGGAGGAGATTTCAATGAGATCCTTTTTGGGAATGAGAAGTAG

Protein sequence

MLKVGSKAEESWSRVTYEKLPEFCYCCGRIGHVAKDCEEDEVNKAEEYQYGPWMREDNIIWGKSKGTKEEGRKSPKANLNVRKGRNGGEDSKSEEEEEARVEELADTRVSFPATAPPRTVEEQGSGGTKRKKESLEDNSNRSPRKGIDMSGEVSNHDEQFSDGSHRGMEIEKKEAQSDKKWEEILEVAVRRYHGPIKAPSSQRAMGSGSQPVRNNHEEETVLANPNQDDQKYKDTKGEERDIGRGCGTTPPDAMKTLCWNIRGAGNPRAVRLLRLVVRQNFPNLVFLSETKIKGLCSNSLKLKLDFDNCFEVSNVGLSGGLMLLWKKEVHVTVRSFSKGHIDAIIELNEDRWRFTGFYGSSDKDCRSDSLDLIIRLQAMDDLPWVLGGDFNEILFGNEK

Homology

[Close]

BLAST of Lcy01g009190 vs. ExPASy TrEMBL
Match: A0A2N9I239 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45945 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.6e-39
Identity = 132/415 (31.81%), Postives = 198/415 (47.71%), Query Frame = 0


Query: 3   KVG-SKAEESWSRVTYEKLPEFCYCCGRIGHVAKDCE----EDEVNKAEEYQYGPWMRED 62
           KVG   ++++W  + YE+LP FCY CG I H  +DCE          +E  QYGPWMR +
Sbjct: 180 KVGLGGSQDAWVSLKYERLPTFCYWCGMISHGDRDCEVWLKSRGTLSSESQQYGPWMRGE 239

Query: 63  NIIWGKSKGTKEEGRKSPKANLNVRK--GRNGGEDSKSEEEEEARVEELADTRVSFPATA 122
            I   +  G    G   P  ++   +  G  GG++ ++ ++         D   S  A  
Sbjct: 240 VIRSFRRMGDDFRG-PPPFNHMPAPRGGGAKGGQNGRTHKDN-------TDFPQSSKAVT 299

Query: 123 PPRTVEEQ----------GSGGTKRKKESLEDNSNRSPRKGIDMSGEVSNHDEQFSDGSH 182
           P R  E+Q           SG +     S+++++  S R+  D+ G+V       +  + 
Sbjct: 300 PTRIFEDQLREIDKDLGLDSGESNVPLTSVQNSNMGSVRRVNDVVGQVGE-----AGPAD 359

Query: 183 RGMEIEKKEAQSDKKWEEILEVAVRRYHGPIKAPSSQRAMGSGSQPVRNNHEEETVLANP 242
            G+ +  KE                    PI + SS+   G+  +          +L  P
Sbjct: 360 IGLVMGCKE------------------QFPISSKSSRPTGGTWKR----------ILREP 419

Query: 243 NQDDQKYKDTKGEERDIGRGCGTTPPDAMKTLCWNIRGAGNPRAVRLLRLVVRQNFPNLV 302
           N       +++    DIG GC  TPP+AM  L WN RG GNP  V+ L ++VRQ  P  +
Sbjct: 420 NGSKHAEPNSQLCYEDIGGGCRATPPEAMSCLFWNCRGLGNPATVQELTIMVRQKDPLAL 479

Query: 303 FLSETKIKGLCSNSLKLKLDFDNCFEVSNVGLSGGLMLLWKKEVHVTVRSFSKGHIDAII 362
           F+SETK+       L+    F     V + G SGGL+L W++ V VTV S+S+ HIDA++
Sbjct: 480 FISETKLDAHKLEILRCYWGFGGKLVVPSRGQSGGLVLFWRRGVSVTVSSYSQHHIDAVV 539

Query: 363 ELNEDR-WRFTGFYGSSDKDCRSDSLDLIIRLQAMDDLPWVLGGDFNEILFGNEK 400
           E ++ + WR TGFYGS     +  + D++  L     LPW+ GGDFNE+L G EK
Sbjct: 540 EDDKPQPWRITGFYGSPTSAGQRVAWDILRELSTHHQLPWLCGGDFNELLRGEEK 553

[Close]

BLAST of Lcy01g009190 vs. ExPASy TrEMBL
Match: A0A2N9IFR8 (RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50751 PE=4 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.9e-37
Identity = 132/409 (32.27%), Postives = 196/409 (47.92%), Query Frame = 0


Query: 6   SKAEESWSRVTYEKLPEFCYCCGRIGHVAKDCE----EDEVNKAEEYQYGPWMREDNIIW 65
           S ++++W  + YE+LP FCY CG I H  +DCE          +E  QYGPWMR + I  
Sbjct: 109 SFSQDAWVSLKYERLPTFCYWCGIISHGDRDCEVWLKSRGTLSSESQQYGPWMRGEVIRS 168

Query: 66  GKSKGTKEEGRKSPKANLNVRKGRNGGEDSKSEEEEEARVEELADTRVSFPATAPPRTVE 125
            +  G  ++ R  P  N ++   R GG  +K  +   A  ++ AD         P R  E
Sbjct: 169 FRRMG--DDFRGPPPFN-HMPAPRGGG--AKGWQNGRAH-KDNADFPQPSKVVTPTRIFE 228

Query: 126 EQ----------GSGGTKRKKESLEDNSNRSPRKGIDMSGEVSNHDEQFSDGSHRGMEIE 185
           +Q           SG +     S+++++  S R+  D+ G+V       +  +  G+ + 
Sbjct: 229 DQLREIDKDLGLDSGESNVPLTSVQNSNMGSVRRVNDVVGQVGE-----AGPADIGLVMG 288

Query: 186 KKEAQSDKKWEEILEVAVRRYHGPIKAPSSQRAMGSGSQPVRNNHEEETVLANPNQDDQK 245
            KE                    PI + SS+   G+  +          +L  PN     
Sbjct: 289 CKE------------------QFPISSKSSRPTGGTWKR----------ILREPNGSKHA 348

Query: 246 YKDTKGEERDIGRGCGTTPPDAMKTLCWNIRGAGNPRAVRLLRLVVRQNFPNLVFLSETK 305
             +++    DIG GC  TPP+AM  L WN RG GNP  V+ L ++VRQ  P  +F+SETK
Sbjct: 349 EPNSQLCYEDIGGGCRATPPEAMSCLFWNCRGLGNPATVQELTIMVRQKDPLALFISETK 408

Query: 306 IKGLCSNSLKLKLDFDNCFEVSNVGLSGGLMLLWKKEVHVTVRSFSKGHIDAIIELNEDR 365
           +       L+    F     V + G SGGL+L W++ V VTV S+S  HIDA++E ++ +
Sbjct: 409 LDVHKLEILRCYWGFGGKLVVPSRGQSGGLVLFWRRGVSVTVSSYSHHHIDAVVEDDKPQ 468

Query: 366 -WRFTGFYGSSDKDCRSDSLDLIIRLQAMDDLPWVLGGDFNEILFGNEK 400
            WR TGFYGS     +  + D++  L     LPW+ GGDFNE+L G EK
Sbjct: 469 PWRITGFYGSPTSAGQRVAWDILRELSTHHQLPWLCGGDFNELLRGEEK 478

[Close]

BLAST of Lcy01g009190 vs. ExPASy TrEMBL
Match: A0A5C7I5K8 (DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010806 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.7e-35
Identity = 134/482 (27.80%), Postives = 212/482 (43.98%), Query Frame = 0


Query: 1   MLKVGSKAEESWSRVTYEKLPEFCYCCGRIGHVAKDCEEDEVNK----AEEYQYGPWMRE 60
           ++++  ++ E W R    K   F   CGR+GH   +C + E  K        +YG W++ 
Sbjct: 154 VIEIPMESRECWGRFMRVKTSRFLLRCGRVGHGINECVDVEAKKEALEGTTTKYGSWLKA 213

Query: 61  DNIIWGKSK-------GTKEEGRKSPKANLNVRKG-----------RNGGEDSK------ 120
             +   K K       G+  + R S      V  G           RNGG +S       
Sbjct: 214 ATVEKVKLKSHSQGSGGSSVKKRSSDDLRETVNIGTFVREKLLPGNRNGGPESSTMVASR 273

Query: 121 ---------SEEEEEARVEELADTRVSFPATAPPRTVEEQG-------SGGTKRKKE--- 180
                    S  EE A  E L    V  P       VE++        SGG  +  E   
Sbjct: 274 EAVENHPEDSSFEERAGKESLDRMCVDGPFNGLAGEVEKEAQGSKGSVSGGQSKLLELSP 333

Query: 181 -----SLEDNSNRSPRKGIDMSGEVSNHDEQFSDGSHRGMEIEKKEAQSDKKWEEILEVA 240
                 + +    SPR   D    V   D+     +  G+++++      KKW+      
Sbjct: 334 IGPLDPMREEQQESPRDPSD----VQELDQDSKSETQPGLKVKR------KKWKRAAREV 393

Query: 241 VRRYHGPIKAPSSQR----AMGSGSQPVRNNHEEETVLANPNQDDQKYK----------- 300
            R+    + A   Q+    ++ S   P+RN++       +P    +K K           
Sbjct: 394 QRKPKSDLLASPLQQKLMVSLPSMKTPIRNSNSPTQHKLSPKTSSEKRKAGSSFNPQPSP 453

Query: 301 -------DTKGEERDIG--------RGCGTTPPDAMKTLCWNIRGAGNPRAVRLLRLVVR 360
                    + E+R  G        + CG  PP AM  LCWN+RG GNP  V  L+ +V+
Sbjct: 454 QGHSNMSGQEWEKRQKGSSKRKVNFKACGAGPPRAMIGLCWNVRGLGNPCTVAALKKLVK 513

Query: 361 QNFPNLVFLSETKIKGLCSNSLKLKLDFDNCFEVSNVGLSGGLMLLWKKEVHVTVRSFSK 400
           ++ P+L+FLSETK++   +  ++  L +   F V ++G SGGL+LLW ++ +V+V+SFS 
Sbjct: 514 KHSPDLIFLSETKMERNRAEKIREALGYKGGFGVDSIGSSGGLLLLWNEDCNVSVQSFSV 573

[Close]

BLAST of Lcy01g009190 vs. ExPASy TrEMBL
Match: A0A7N2LUL7 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-34
Identity = 122/399 (30.58%), Postives = 166/399 (41.60%), Query Frame = 0


Query: 6   SKAEESWSRVTYEKLPEFCYCCGRIGHVAKDCE---EDEVNKAEEYQ-YGPWMREDNIIW 65
           SK E+SW    YE+LP  CY CG + HV  DC+   E E    +E Q YG W+R    + 
Sbjct: 183 SKGEQSWVSFKYERLPNICYWCGCLNHVDSDCDVWIESEGKLTKENQAYGAWIRATPYVK 242

Query: 66  GKSKGTKEEGRKSPKANLNVRKGRNGGEDSKSEEEEEARVEELADTRVSFPATAPPRTVE 125
           G+S   K  G  + K               K+++++    E +A   V       P  V+
Sbjct: 243 GRSSVLKVPGFYAAK---------------KAQKKKVVEAENVAVPPVLLVDDFLPTVVQ 302

Query: 126 EQGSGGTKRKKESLEDNSNRSPRKGIDMSGEVSNHDEQFSDGSHRGMEIEKKEAQSDKKW 185
           EQ         E        S    +   GE   HD    +        E++ A+ DK  
Sbjct: 303 EQ--------TEVAAHFHYASNEVSVVSEGETMIHDGTVLESHDSRESFEERLAEIDK-- 362

Query: 186 EEILEVAVRRYHGPIKAPSSQRAMGSGSQPVRNNHEEETVLANPNQDDQKYKDTKGEERD 245
                                                          D    D  G +  
Sbjct: 363 -----------------------------------------------DLTRFDKGGSKYF 422

Query: 246 IGRGCGTTPPDAMKTLCWNIRGAGNPRAVRLLRLVVRQNFPNLVFLSETKIKGLCSNSLK 305
            G GCG  PP AM  LCWN RG G+P+    L  ++  + P++VF++ET +K      L 
Sbjct: 423 NGGGCGAAPPTAMNILCWNCRGLGSPQTEHELGDLIWAHSPSIVFVAETWLKKTRLIYLC 482

Query: 306 LKLDFDNCFEVSNVGLSGGLMLLWKKEVHVTVRSFSKGHIDAIIEL-NEDRWRFTGFYGS 365
            KL FD   E S  G  GG+++ WKKEV  +V ++S  HIDAII    E  WRFTGFYG 
Sbjct: 483 DKLKFDGMIEFSREGRGGGVVIFWKKEVDFSVDTYSPNHIDAIINKGKEGEWRFTGFYGE 509

Query: 366 SDKDCRSDSLDLIIRLQAMDDLPWVLGGDFNEILFGNEK 400
           S+      S   + RL+A   LPW+  GDFNEI+  +EK
Sbjct: 543 SETSNHYISWATLRRLKAKFTLPWICAGDFNEIIRAHEK 509

[Close]

BLAST of Lcy01g009190 vs. ExPASy TrEMBL
Match: A0A2N9EEH0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1027 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-34
Identity = 135/450 (30.00%), Postives = 195/450 (43.33%), Query Frame = 0


Query: 8   AEESWSRVTYEKLPEFCYCCGRIGHVAKDCEEDEVN----KAEEYQYGPWMREDNIIWGK 67
           + E W    YE+LP F Y CG++ H  KDC     N    K+ + QYGPW+R       +
Sbjct: 186 SSERWISFKYERLPNFIYWCGKVDHGDKDCSYWLANKHKLKSNDQQYGPWLRATVNAGFR 245

Query: 68  SKGTKEEGRKSPKANLNVRKGRNGGEDSKSEEEEEARVEELADTRVSFPATAPPRTVEEQ 127
                 EG+ S       R    GG  S++E+E +  V+     + +        T+   
Sbjct: 246 RTSVIVEGQDSS------RPTHPGGTRSQAEDETQG-VKASQSEQTNHVHDDTEDTIMRD 305

Query: 128 GSGGTKRKKESLEDNSNRSPRKGID--MSGEVSNHDEQFSDGS----HRGMEIEKKEAQS 187
              G K    +L+D+S R  +   D   + E+   DE+   GS    H    IEK  A +
Sbjct: 306 VL-GHKNHVFNLQDDSERMEKVAKDALFTAELERIDEELGIGSKMHDHPLTTIEKVAALT 365

Query: 188 DKKWEE------ILEVAVRRYHGPIKAPS------------------------------- 247
            ++ E+      I E  V       +A +                               
Sbjct: 366 RRQDEDSIIPNTITETPVATNSSTSQAETGNDISHTELVICDDTLHALRDVALPGNTSDD 425

Query: 248 ----------SQRAMGSGSQPVRNNHEEETVLANPNQDDQKYKDTKGEERDIGRGCGTTP 307
                      +   G+G+   + N  E   L+  +++D + KD+ G           TP
Sbjct: 426 TIQLKVSRWKKRARTGTGNSLEQVNSSEALTLSKRSREDIEAKDSVGN--------SPTP 485

Query: 308 PDAMKTLCWNIRGAGNPRAVRLLRLVVRQNFPNLVFLSETKIKGLCSNSLKLKLDFDNCF 367
           P +M  L  N RG GNP+ VR L  +V+   P +VFL ET+++      L++KL      
Sbjct: 486 PGSMSLLSVNCRGLGNPQTVRELHDLVKHKAPGVVFLIETRLELKNLEVLRIKLGMHGAV 545

Query: 368 EVSNVGLSGGLMLLWKKEVHVTVRSFSKGHIDA-IIELNEDRWRFTGFYGSSDKDCRSDS 400
            V   G  GGL LLWKKEV  T+ S S GHIDA ++      W FTGFYG+ +   R DS
Sbjct: 546 GVERTGTGGGLALLWKKEVQTTIHSHSVGHIDATLVTWGSQEWHFTGFYGNPETSKRRDS 605

[Close]

BLAST of Lcy01g009190 vs. NCBI nr
Match: XP_028075737.1 (uncharacterized protein LOC114277953 [Camellia sinensis])

HSP 1 Score: 161.0 bits (406), Expect = 2.1e-35
Identity = 75/148 (50.68%), Postives = 97/148 (65.54%), Query Frame = 0


Query: 254 MKTLCWNIRGAGNPRAVRLLRLVVRQNFPNLVFLSETKIKGLCSNSLKLKLDFDNCFEVS 313
           MK LCWN RG GNPR VR L+L++++  P +VFL ETK+       ++ KL    CF V 
Sbjct: 1   MKILCWNCRGLGNPRTVRFLQLLLKKEVPTMVFLVETKLDARAMERIRCKLGLQRCFTVD 60

Query: 314 NVGLSGGLMLLWKKEVHVTVRSFSKGHIDAII--ELNEDRWRFTGFYGSSDKDCRSDSLD 373
            VGLSGGL LLW  E+ + ++SFS+GH+D+II  E     W FTGFYG+     RSDS +
Sbjct: 61  RVGLSGGLALLWVGEIQLQIKSFSRGHVDSIILSESGVASWCFTGFYGNPIASLRSDSWE 120

Query: 374 LIIRLQAMDDLPWVLGGDFNEILFGNEK 400
           L+ RLQ    LPW+  GDFNEIL+ +EK
Sbjct: 121 LLRRLQDQMHLPWLCAGDFNEILYAHEK 148

[Close]

BLAST of Lcy01g009190 vs. NCBI nr
Match: TXG63812.1 (hypothetical protein EZV62_010806 [Acer yangbiense])

HSP 1 Score: 158.3 bits (399), Expect = 1.4e-34
Identity = 134/482 (27.80%), Postives = 212/482 (43.98%), Query Frame = 0


Query: 1   MLKVGSKAEESWSRVTYEKLPEFCYCCGRIGHVAKDCEEDEVNK----AEEYQYGPWMRE 60
           ++++  ++ E W R    K   F   CGR+GH   +C + E  K        +YG W++ 
Sbjct: 154 VIEIPMESRECWGRFMRVKTSRFLLRCGRVGHGINECVDVEAKKEALEGTTTKYGSWLKA 213

Query: 61  DNIIWGKSK-------GTKEEGRKSPKANLNVRKG-----------RNGGEDSK------ 120
             +   K K       G+  + R S      V  G           RNGG +S       
Sbjct: 214 ATVEKVKLKSHSQGSGGSSVKKRSSDDLRETVNIGTFVREKLLPGNRNGGPESSTMVASR 273

Query: 121 ---------SEEEEEARVEELADTRVSFPATAPPRTVEEQG-------SGGTKRKKE--- 180
                    S  EE A  E L    V  P       VE++        SGG  +  E   
Sbjct: 274 EAVENHPEDSSFEERAGKESLDRMCVDGPFNGLAGEVEKEAQGSKGSVSGGQSKLLELSP 333

Query: 181 -----SLEDNSNRSPRKGIDMSGEVSNHDEQFSDGSHRGMEIEKKEAQSDKKWEEILEVA 240
                 + +    SPR   D    V   D+     +  G+++++      KKW+      
Sbjct: 334 IGPLDPMREEQQESPRDPSD----VQELDQDSKSETQPGLKVKR------KKWKRAAREV 393

Query: 241 VRRYHGPIKAPSSQR----AMGSGSQPVRNNHEEETVLANPNQDDQKYK----------- 300
            R+    + A   Q+    ++ S   P+RN++       +P    +K K           
Sbjct: 394 QRKPKSDLLASPLQQKLMVSLPSMKTPIRNSNSPTQHKLSPKTSSEKRKAGSSFNPQPSP 453

Query: 301 -------DTKGEERDIG--------RGCGTTPPDAMKTLCWNIRGAGNPRAVRLLRLVVR 360
                    + E+R  G        + CG  PP AM  LCWN+RG GNP  V  L+ +V+
Sbjct: 454 QGHSNMSGQEWEKRQKGSSKRKVNFKACGAGPPRAMIGLCWNVRGLGNPCTVAALKKLVK 513

Query: 361 QNFPNLVFLSETKIKGLCSNSLKLKLDFDNCFEVSNVGLSGGLMLLWKKEVHVTVRSFSK 400
           ++ P+L+FLSETK++   +  ++  L +   F V ++G SGGL+LLW ++ +V+V+SFS 
Sbjct: 514 KHSPDLIFLSETKMERNRAEKIREALGYKGGFGVDSIGSSGGLLLLWNEDCNVSVQSFSV 573

[Close]

BLAST of Lcy01g009190 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia])

HSP 1 Score: 154.1 bits (388), Expect = 2.6e-33
Identity = 76/146 (52.05%), Postives = 94/146 (64.38%), Query Frame = 0


Query: 254 MKTLCWNIRGAGNPRAVRLLRLVVRQNFPNLVFLSETKIKGLCSNSLKLKLDFDNCFEVS 313
           MK+LCWN+ G GNP   R LR +VR++ P LVFLSETK         K +L FD C  V+
Sbjct: 1   MKSLCWNVPGLGNPDTFRTLRNLVRRSQPQLVFLSETKGNPTLEGRAKRELSFDCCVSVA 60

Query: 314 NVGLSGGLMLLWKKEVHVTVRSFSKGHIDAIIELNEDRWRFTGFYGSSDKDCRSDSLDLI 373
           + G SGGLMLLW  + +V ++S S GHID+II      WRFTGFYG+     RS S  L+
Sbjct: 61  STGKSGGLMLLWNSDSNVRIQSMSPGHIDSIITDKYGSWRFTGFYGNPCTYKRSASWKLL 120

Query: 374 IRLQAMDDLPWVLGGDFNEILFGNEK 400
            RL  M DLPW++GGDFNEI+   EK
Sbjct: 121 ERLARMMDLPWIIGGDFNEIVSMTEK 146

[Close]

BLAST of Lcy01g009190 vs. NCBI nr
Match: XP_028073297.1 (uncharacterized protein LOC114275455 [Camellia sinensis])

HSP 1 Score: 149.1 bits (375), Expect = 8.3e-32
Identity = 69/148 (46.62%), Postives = 94/148 (63.51%), Query Frame = 0


Query: 254 MKTLCWNIRGAGNPRAVRLLRLVVRQNFPNLVFLSETKIKGLCSNSLKLKLDFDNCFEVS 313
           M  +CWN RG GNPR+VR L+ ++++  P LVFL ETK+       ++ KL F   F V+
Sbjct: 1   MNVVCWNCRGLGNPRSVRSLQFLLKREVPGLVFLMETKLDSKHMEGIRQKLGFCGGFYVN 60

Query: 314 NVGLSGGLMLLWKKEVHVTVRSFSKGHIDAIIE--LNEDRWRFTGFYGSSDKDCRSDSLD 373
            VGL+GGL LLW + + V+V+S+S GHID  ++  L E  WRFTGFYG  +   R  S +
Sbjct: 61  RVGLAGGLALLWTEGIQVSVKSYSVGHIDVFVDAGLGEQSWRFTGFYGHPEMAQRKTSWE 120

Query: 374 LIIRLQAMDDLPWVLGGDFNEILFGNEK 400
           L+ +L     +PW+  GDFNEILF  EK
Sbjct: 121 LLRKLSTCFQMPWLCAGDFNEILFSREK 148

[Close]

BLAST of Lcy01g009190 vs. NCBI nr
Match: XP_042950313.1 (uncharacterized protein LOC122282426 [Carya illinoinensis])

HSP 1 Score: 147.9 bits (372), Expect = 1.9e-31
Identity = 70/147 (47.62%), Postives = 99/147 (67.35%), Query Frame = 0


Query: 254 MKTLCWNIRGAGNPRAVRLLRLVVRQNFPNLVFLSETKIKGLCSNSLKLKLDFDNCFEVS 313
           MKT+CWN RG GNP  +R LR ++ +  P+L+FL ETK+     ++LK KL F NCF V 
Sbjct: 1   MKTICWNSRGLGNPSGIRALRDLIAREGPDLLFLQETKLSTKGMDALKCKLGFVNCFSVD 60

Query: 314 NVGLSGGLMLLWKKEVHVTVRSFSKGHIDAIIELNEDR-WRFTGFYGSSDKDCRSDSLDL 373
           + G SGGL LLW  ++ V +RSFS+ HID  I++++   WRFTG YG  D   R+ + +L
Sbjct: 61  SEGRSGGLGLLWNSDLGVELRSFSQYHIDVHIKIDDLMVWRFTGLYGHPDTSRRTFTWNL 120

Query: 374 IIRLQAMDDLPWVLGGDFNEILFGNEK 400
           I  L +++ LPW++GGD NE+L  +EK
Sbjct: 121 IRTLSSIEQLPWLVGGDLNEVLHPHEK 147

The following BLAST results are available for this feature:

BLAST of Lcy01g009190 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g009190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2N9I239	2.6e-39	31.81	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45945 ...	[more]
A0A2N9IFR8	1.9e-37	32.27	RNase H domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50751 ...	[more]
A0A5C7I5K8	6.7e-35	27.80	DUF4283 domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_010806 ...	[more]
A0A7N2LUL7	1.5e-34	30.58	Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]
A0A2N9EEH0	1.9e-34	30.00	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1027 PE=4 SV=1	[more]

BLAST of Lcy01g009190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_028075737.1	2.1e-35	50.68	uncharacterized protein LOC114277953 [Camellia sinensis]	[more]
TXG63812.1	1.4e-34	27.80	hypothetical protein EZV62_010806 [Acer yangbiense]	[more]
XP_022157437.1	2.6e-33	52.05	uncharacterized protein LOC111024135 [Momordica charantia]	[more]
XP_028073297.1	8.3e-32	46.62	uncharacterized protein LOC114275455 [Camellia sinensis]	[more]
XP_042950313.1	1.9e-31	47.62	uncharacterized protein LOC122282426 [Carya illinoinensis]	[more]

BLAST of Lcy01g009190 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 7..38 e-value: 1.8E-10 score: 40.3
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 251..399 e-value: 1.8E-15 score: 59.3
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 250..396
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 227..247
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 124..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 229..245
None	No IPR available	PANTHER	PTHR35218	FAMILY NOT NAMED	coord: 241..345
None	No IPR available	PANTHER	PTHR35218:SF2	SUBFAMILY NOT NAMED	coord: 241..345
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 24..39 score: 10.344996

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g009190.1	Lcy01g009190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding