Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCCAAAAGGTCAAGAAGATCGGTAGCTTCTTCATCCTCTACACCTTTCGATAATCTTAAATTTGTCAGTAGGGATGCTGAAACCGTCTTCAACACCTACGTGGTGAATAGAGGGGTCATTCTGGAGAGAGGTTTAGTTCCGAGCACCCGATCCTAGCCTGACCTCACCCATAACATAGCTGAGAGGGGTTGAGATAGATTCACTAGGCACCCCGAGGCCGCCATAGTCCCAATAGTGAGGGAGTTTTACGCTAACATGGTGGAAGGATCCACTACTTCCTTTGTTAGGGGTAAAATTATTCCCTTCAATTCGGCCTCCATTAACCAATTCTATGGCCTTCCTGACATAGAGCGTGATGGATACAATGATTACGCGAGTAACTACTTTGATGCCCATCAGATCATTGAACATTTATGTAGGTCGGGGGCAGAATGGTTAATGAGGAGGGGTGAAGCCATAAATTTCAAATCCTCTGATTTAACAGTGGATAACCGAGTCTGGCATAGTTTTCTGTGTGTCAAGGTTATGCCTGTGTTGCATCTAAGCGAAGTAACAAAGGAAAGGACGGCTCTGTTATTCGCTATAGTGACCGGTCGCTCTGTAGATGTAGGGAAAGTTATTCATGCTTCCATGCGTCGGATTCGCAGAGGAGCCACCACCGTAGGACTAGGACACCCTTCCCTCATCACAGCTCTCTACAGGAATGTTGGGGTCGAGTGGGGTCCCCGTGAGGAGATTAGTCACCCTGCAGTTGTGATTGATGGGAACTTCATCATGACTAGACTTAGGGAGCCTAGACCTAGGTAG
mRNA sequence
ATGAGTGCCAAAAGGTCAAGAAGATCGGTAGCTTCTTCATCCTCTACACCTTTCGATAATCTTAAATTTGTCAGTAGGGATGCTGAAACCGTCTTCAACACCTACGTGGTGAATAGAGGGGTCATTCTGGAGAGAGGATCCACTACTTCCTTTGTTAGGGGTAAAATTATTCCCTTCAATTCGGCCTCCATTAACCAATTCTATGGCCTTCCTGACATAGAGCGTGATGGATACAATGATTACGCGAGTAACTACTTTGATGCCCATCAGATCATTGAACATTTATGTAGGTCGGGGGCAGAATGGTTAATGAGGAGGGGTGAAGCCATAAATTTCAAATCCTCTGATTTAACAGTGGATAACCGAGTCTGGCATAGTTTTCTGTGTGTCAAGGTTATGCCTGTGTTGCATCTAAGCGAAGTAACAAAGGAAAGGACGGCTCTGTTATTCGCTATAGTGACCGGTCGCTCTGTAGATGTAGGGAAAGTTATTCATGCTTCCATGCGTCGGATTCGCAGAGGAGCCACCACCGTAGGACTAGGACACCCTTCCCTCATCACAGCTCTCTACAGGAATGTTGGGGTCGAGTGGGGTCCCCGTGAGGAGATTAGTCACCCTGCAGTTGTGATTGATGGGAACTTCATCATGACTAGACTTAGGGAGCCTAGACCTAGGTAG
Coding sequence (CDS)
ATGAGTGCCAAAAGGTCAAGAAGATCGGTAGCTTCTTCATCCTCTACACCTTTCGATAATCTTAAATTTGTCAGTAGGGATGCTGAAACCGTCTTCAACACCTACGTGGTGAATAGAGGGGTCATTCTGGAGAGAGGATCCACTACTTCCTTTGTTAGGGGTAAAATTATTCCCTTCAATTCGGCCTCCATTAACCAATTCTATGGCCTTCCTGACATAGAGCGTGATGGATACAATGATTACGCGAGTAACTACTTTGATGCCCATCAGATCATTGAACATTTATGTAGGTCGGGGGCAGAATGGTTAATGAGGAGGGGTGAAGCCATAAATTTCAAATCCTCTGATTTAACAGTGGATAACCGAGTCTGGCATAGTTTTCTGTGTGTCAAGGTTATGCCTGTGTTGCATCTAAGCGAAGTAACAAAGGAAAGGACGGCTCTGTTATTCGCTATAGTGACCGGTCGCTCTGTAGATGTAGGGAAAGTTATTCATGCTTCCATGCGTCGGATTCGCAGAGGAGCCACCACCGTAGGACTAGGACACCCTTCCCTCATCACAGCTCTCTACAGGAATGTTGGGGTCGAGTGGGGTCCCCGTGAGGAGATTAGTCACCCTGCAGTTGTGATTGATGGGAACTTCATCATGACTAGACTTAGGGAGCCTAGACCTAGGTAG
Protein sequence
MSAKRSRRSVASSSSTPFDNLKFVSRDAETVFNTYVVNRGVILERGSTTSFVRGKIIPFNSASINQFYGLPDIERDGYNDYASNYFDAHQIIEHLCRSGAEWLMRRGEAINFKSSDLTVDNRVWHSFLCVKVMPVLHLSEVTKERTALLFAIVTGRSVDVGKVIHASMRRIRRGATTVGLGHPSLITALYRNVGVEWGPREEISHPAVVIDGNFIMTRLREPRPR
Homology
BLAST of Lcy01g008830 vs. ExPASy TrEMBL
Match:
A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 7.5e-52
Identity = 118/261 (45.21%), Postives = 148/261 (56.70%), Query Frame = 0
Query: 1 MSAKRSRRSVASSSSTPFDNLKFVSRDAETVFNTYVVNRGVILER--------------- 60
MS+K R A SS F+ KF+S+DA + +VV VI ER
Sbjct: 2 MSSKTKRARSALSSEGAFNRHKFISKDAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQN 61
Query: 61 ------------------------------GSTTSFVRGKIIPFNSASINQFYGLPDIER 120
GS+ SFVRG+ + F+ +IN++Y LP+ ER
Sbjct: 62 IMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121
Query: 121 DGYNDYASNYFDAHQIIEHLCRSGAEWLMRRGEAINFKSSDLTVDNRVWHSFLCVKVMPV 180
D Y YAS + D HQII LC+ GAEW++ GE I FKSS+LTV N+VWH F+C K++PV
Sbjct: 122 DEYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPV 181
Query: 181 LHLSEVTKERTALLFAIVTGRSVDVGKVIHASMRRIRRGATTVGLGHPSLITALYRNVGV 217
H S VTKER LL+AI T RSVDVGKVIH S+ IR+ T GLGH SLITAL RN GV
Sbjct: 182 AHTSSVTKERAILLYAIATKRSVDVGKVIHKSLCNIRKSGMTGGLGHSSLITALCRNEGV 241
BLAST of Lcy01g008830 vs. ExPASy TrEMBL
Match:
A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)
HSP 1 Score: 208.8 bits (530), Expect = 2.4e-50
Identity = 99/171 (57.89%), Postives = 123/171 (71.93%), Query Frame = 0
Query: 46 GSTTSFVRGKIIPFNSASINQFYGLPDIERDGYNDYASNYFDAHQIIEHLCRSGAEWLMR 105
GS+ SFVRG+ + F+ +IN++Y LP+ ERD Y YAS + D HQII LC+ GAEW++
Sbjct: 30 GSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEWIIN 89
Query: 106 RGEAINFKSSDLTVDNRVWHSFLCVKVMPVLHLSEVTKERTALLFAIVTGRSVDVGKVIH 165
GE I FKSS+LTV N+VWH F+C K++PV H S VTKER LL+AI T RSVDVGKVIH
Sbjct: 90 PGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIH 149
Query: 166 ASMRRIRRGATTVGLGHPSLITALYRNVGVEWGPREEISHPAVVIDGNFIM 217
S+ IR+ T GLGH SLITAL RN GV W +EE+ P ++D NFIM
Sbjct: 150 KSLCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFIM 200
BLAST of Lcy01g008830 vs. ExPASy TrEMBL
Match:
A0A0A0KER1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1)
HSP 1 Score: 208.4 bits (529), Expect = 3.2e-50
Identity = 116/261 (44.44%), Postives = 147/261 (56.32%), Query Frame = 0
Query: 1 MSAKRSRRSVASSSSTPFDNLKFVSRDAETVFNTYVVNRGVILER--------------- 60
MS+K R A SS F+ KF+S+DA + VV VI ER
Sbjct: 2 MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQN 61
Query: 61 ------------------------------GSTTSFVRGKIIPFNSASINQFYGLPDIER 120
GS+ SFVRG+ + F+ +IN++Y LP+ ER
Sbjct: 62 IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121
Query: 121 DGYNDYASNYFDAHQIIEHLCRSGAEWLMRRGEAINFKSSDLTVDNRVWHSFLCVKVMPV 180
D Y+ YAS + D HQII LC+ GAEW++ GE I FKSS+LTV N+VWH F+C K++PV
Sbjct: 122 DEYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQVWHKFICAKLLPV 181
Query: 181 LHLSEVTKERTALLFAIVTGRSVDVGKVIHASMRRIRRGATTVGLGHPSLITALYRNVGV 217
H S VTKER LL+AI T RSVDVGKVI S+ IR+ T GLGH SLITAL RN GV
Sbjct: 182 AHTSSVTKERAILLYAIATKRSVDVGKVIQKSLCNIRKSGMTGGLGHSSLITALCRNEGV 241
BLAST of Lcy01g008830 vs. ExPASy TrEMBL
Match:
A0A0A0KNI1 (AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 PE=4 SV=1)
HSP 1 Score: 149.8 bits (377), Expect = 1.3e-32
Identity = 99/261 (37.93%), Postives = 128/261 (49.04%), Query Frame = 0
Query: 1 MSAKRSRRSVASSSSTPFDNLKFVSRDAETVFNTYVV------NRGV------------- 60
MS+K R A SS F+ KF+S+DA + VV RG+
Sbjct: 2 MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSTKPERGLAPCEVHQPQLFQN 61
Query: 61 ILER--------------------------GSTTSFVRGKIIPFNSASINQFYGLPDIER 120
I++R GS+ SFVRG+ + F+ +IN++Y LP+ ER
Sbjct: 62 IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121
Query: 121 DGYNDYASNYFDAHQIIEHLCRSGAEWLMRRGEAINFKSSDLTVDNRVWHSFLCVKVMPV 180
D Y+ YAS + D HQII LC+ GAEWL +P+
Sbjct: 122 DEYDIYASEHVDVHQIIRELCQPGAEWL-----------------------------LPM 181
Query: 181 LHLSEVTKERTALLFAIVTGRSVDVGKVIHASMRRIRRGATTVGLGHPSLITALYRNVGV 217
H S VTKER LL+AI T RSVDVGKVI S+ IR+ T GLGH SLITAL RN GV
Sbjct: 182 AHTSSVTKERAILLYAIATKRSVDVGKVIQKSLCNIRKSGMTGGLGHSSLITALCRNEGV 233
BLAST of Lcy01g008830 vs. ExPASy TrEMBL
Match:
A0A2G9G807 (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26059 PE=4 SV=1)
HSP 1 Score: 131.3 bits (329), Expect = 4.9e-27
Identity = 66/176 (37.50%), Postives = 103/176 (58.52%), Query Frame = 0
Query: 44 ERGSTTSFVRGKIIPFNSASINQFYGLPDIERDGYNDYASNYFDAHQIIEHLCRSGAEWL 103
E + VRG+ +PF+S +IN+ Y +P IE D + ++ N D ++ LC GA+W
Sbjct: 89 EHKNLKCLVRGREVPFDSVTINELYNIPPIELDAFENFCENGIDYEELTRTLCPHGAQWK 148
Query: 104 MRRGEAINFKSSDLTVDNRVWHSFLCVKVMPVLHLSEVTKERTALLFAIVTGRSVDVGKV 163
M +GE ++FKS+ L ++W F+ +++P H EVT +R LL+ I+TG++ DVGK+
Sbjct: 149 MTKGEYVSFKSNCLDKAAKIWLWFIFARMLPTRHSGEVTADRALLLYCIMTGKAFDVGKI 208
Query: 164 IHASMRRIRRGATTVGLGHPSLITALYRNVGVEWGPREEISHPAVVIDGNFIMTRL 220
I S+ + ++ GL PSLIT L GV+W +EE+ P ID N M R+
Sbjct: 209 ISDSIIQ-SANSSRDGLWFPSLITKLCTRAGVKWDEKEELIFPRHPID-NTTMLRI 262
BLAST of Lcy01g008830 vs. NCBI nr
Match:
KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])
HSP 1 Score: 213.8 bits (543), Expect = 1.6e-51
Identity = 118/261 (45.21%), Postives = 148/261 (56.70%), Query Frame = 0
Query: 1 MSAKRSRRSVASSSSTPFDNLKFVSRDAETVFNTYVVNRGVILER--------------- 60
MS+K R A SS F+ KF+S+DA + +VV VI ER
Sbjct: 2 MSSKTKRARSALSSEGAFNRHKFISKDAADGYKKHVVKSSVIPERGLAPCEVHQPQLYQN 61
Query: 61 ------------------------------GSTTSFVRGKIIPFNSASINQFYGLPDIER 120
GS+ SFVRG+ + F+ +IN++Y LP+ ER
Sbjct: 62 IMQRGWSDFVKQPEPAVVSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121
Query: 121 DGYNDYASNYFDAHQIIEHLCRSGAEWLMRRGEAINFKSSDLTVDNRVWHSFLCVKVMPV 180
D Y YAS + D HQII LC+ GAEW++ GE I FKSS+LTV N+VWH F+C K++PV
Sbjct: 122 DEYAIYASEHVDVHQIIRELCQPGAEWIINPGEPIRFKSSNLTVSNQVWHKFICAKLLPV 181
Query: 181 LHLSEVTKERTALLFAIVTGRSVDVGKVIHASMRRIRRGATTVGLGHPSLITALYRNVGV 217
H S VTKER LL+AI T RSVDVGKVIH S+ IR+ T GLGH SLITAL RN GV
Sbjct: 182 AHTSSVTKERAILLYAIATKRSVDVGKVIHKSLCNIRKSGMTGGLGHSSLITALCRNEGV 241
BLAST of Lcy01g008830 vs. NCBI nr
Match:
XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])
HSP 1 Score: 208.8 bits (530), Expect = 5.0e-50
Identity = 99/171 (57.89%), Postives = 123/171 (71.93%), Query Frame = 0
Query: 46 GSTTSFVRGKIIPFNSASINQFYGLPDIERDGYNDYASNYFDAHQIIEHLCRSGAEWLMR 105
GS+ SFVRG+ + F+ +IN++Y LP+ ERD Y YAS + D HQII LC+ GAEW++
Sbjct: 30 GSSRSFVRGRQVSFDYGTINRYYHLPNFERDEYAIYASEHVDVHQIIRELCQPGAEWIIN 89
Query: 106 RGEAINFKSSDLTVDNRVWHSFLCVKVMPVLHLSEVTKERTALLFAIVTGRSVDVGKVIH 165
GE I FKSS+LTV N+VWH F+C K++PV H S VTKER LL+AI T RSVDVGKVIH
Sbjct: 90 PGEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIH 149
Query: 166 ASMRRIRRGATTVGLGHPSLITALYRNVGVEWGPREEISHPAVVIDGNFIM 217
S+ IR+ T GLGH SLITAL RN GV W +EE+ P ++D NFIM
Sbjct: 150 KSLCNIRKSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFIM 200
BLAST of Lcy01g008830 vs. NCBI nr
Match:
KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])
HSP 1 Score: 208.4 bits (529), Expect = 6.5e-50
Identity = 116/261 (44.44%), Postives = 147/261 (56.32%), Query Frame = 0
Query: 1 MSAKRSRRSVASSSSTPFDNLKFVSRDAETVFNTYVVNRGVILER--------------- 60
MS+K R A SS F+ KF+S+DA + VV VI ER
Sbjct: 2 MSSKTKRARSALSSEGAFNRHKFISKDAADRYRKLVVKSSVIPERGLAPCEVHQPQLFQN 61
Query: 61 ------------------------------GSTTSFVRGKIIPFNSASINQFYGLPDIER 120
GS+ SFVRG+ + F+ +IN++Y LP+ ER
Sbjct: 62 IMQRGWSDFVKQPEPAVLSIVREFYANMVEGSSRSFVRGRQVSFDYGTINRYYHLPNFER 121
Query: 121 DGYNDYASNYFDAHQIIEHLCRSGAEWLMRRGEAINFKSSDLTVDNRVWHSFLCVKVMPV 180
D Y+ YAS + D HQII LC+ GAEW++ GE I FKSS+LTV N+VWH F+C K++PV
Sbjct: 122 DEYDIYASEHVDVHQIIRELCQPGAEWVINPGEPIRFKSSNLTVSNQVWHKFICAKLLPV 181
Query: 181 LHLSEVTKERTALLFAIVTGRSVDVGKVIHASMRRIRRGATTVGLGHPSLITALYRNVGV 217
H S VTKER LL+AI T RSVDVGKVI S+ IR+ T GLGH SLITAL RN GV
Sbjct: 182 AHTSSVTKERAILLYAIATKRSVDVGKVIQKSLCNIRKSGMTGGLGHSSLITALCRNEGV 241
BLAST of Lcy01g008830 vs. NCBI nr
Match:
PIN01433.1 (hypothetical protein CDL12_26059 [Handroanthus impetiginosus])
HSP 1 Score: 131.3 bits (329), Expect = 1.0e-26
Identity = 66/176 (37.50%), Postives = 103/176 (58.52%), Query Frame = 0
Query: 44 ERGSTTSFVRGKIIPFNSASINQFYGLPDIERDGYNDYASNYFDAHQIIEHLCRSGAEWL 103
E + VRG+ +PF+S +IN+ Y +P IE D + ++ N D ++ LC GA+W
Sbjct: 89 EHKNLKCLVRGREVPFDSVTINELYNIPPIELDAFENFCENGIDYEELTRTLCPHGAQWK 148
Query: 104 MRRGEAINFKSSDLTVDNRVWHSFLCVKVMPVLHLSEVTKERTALLFAIVTGRSVDVGKV 163
M +GE ++FKS+ L ++W F+ +++P H EVT +R LL+ I+TG++ DVGK+
Sbjct: 149 MTKGEYVSFKSNCLDKAAKIWLWFIFARMLPTRHSGEVTADRALLLYCIMTGKAFDVGKI 208
Query: 164 IHASMRRIRRGATTVGLGHPSLITALYRNVGVEWGPREEISHPAVVIDGNFIMTRL 220
I S+ + ++ GL PSLIT L GV+W +EE+ P ID N M R+
Sbjct: 209 ISDSIIQ-SANSSRDGLWFPSLITKLCTRAGVKWDEKEELIFPRHPID-NTTMLRI 262
BLAST of Lcy01g008830 vs. NCBI nr
Match:
EOY08969.1 (Uncharacterized protein TCM_024271 [Theobroma cacao])
HSP 1 Score: 128.3 bits (321), Expect = 8.6e-26
Identity = 62/162 (38.27%), Postives = 98/162 (60.49%), Query Frame = 0
Query: 54 GKIIPFNSASINQFYGLPDIERDGYNDYASNYFDAHQIIEHLCRSGAEWLMRRGEAINFK 113
G +PFN+ +INQFY DIE D Y+ + + + +++ L G EW + +G I+FK
Sbjct: 14 GTKVPFNAHTINQFYNTLDIENDEYDQFVNGDINLDEVLRSLSILGTEWQVHKGVVISFK 73
Query: 114 SSDLTVDNRVWHSFLCVKVMPVLHLSEVTKERTALLFAIVTGRSVDVGKVIHASMRRIRR 173
++ + D +VW+ F+ +K++ V +LS+VTK+R LL+AIVT + +D+G++I ++ R
Sbjct: 74 ANAMDNDYKVWYHFVAMKLLLVKYLSDVTKDRAILLYAIVTKKFIDIGQLIFKNIIMSAR 133
Query: 174 GATTVGLGHPSLITALYRNVGVEWGPREEISHPAVVIDGNFI 216
GL +PSLITAL V W P EE+ HP + G I
Sbjct: 134 SPPN-GLWYPSLITALCCQARVVWSPNEELPHPKIPYGGGII 174
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BBY3 | 7.5e-52 | 45.21 | Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw... | [more] |
A0A1S3C7Y0 | 2.4e-50 | 57.89 | uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=... | [more] |
A0A0A0KER1 | 3.2e-50 | 44.44 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G149380 PE=4 SV=1 | [more] |
A0A0A0KNI1 | 1.3e-32 | 37.93 | AA_kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G468460 P... | [more] |
A0A2G9G807 | 4.9e-27 | 37.50 | Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_26059 P... | [more] |
Match Name | E-value | Identity | Description | |
KAA0033353.1 | 1.6e-51 | 45.21 | putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]... | [more] |
XP_008458668.1 | 5.0e-50 | 57.89 | PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo] | [more] |
KGN46897.1 | 6.5e-50 | 44.44 | hypothetical protein Csa_020731 [Cucumis sativus] | [more] |
PIN01433.1 | 1.0e-26 | 37.50 | hypothetical protein CDL12_26059 [Handroanthus impetiginosus] | [more] |
EOY08969.1 | 8.6e-26 | 38.27 | Uncharacterized protein TCM_024271 [Theobroma cacao] | [more] |
Match Name | E-value | Identity | Description | |