Lcy01g008460 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g008460
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr01: 19713129 .. 19713656 (+)
RNA-Seq Expression	Lcy01g008460
Synteny	Lcy01g008460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGACAGTGGGGTGTGGAGGGAGAATGAAAGGGAGATCGCTCGGGTGGCTTTAGACTACTTCAAGGAGCTTTTTGACTCTTCTACTCCGAATGAGCAGGCTATCGAGAAAGTGATAGATTGTGTGCAAAATAGAATCCCTGATCAGACTTGTCAAGCCCTTGAGCAACCTTACTCTAAAGATGAGATCGAGGTTGCTATGAAGAGTATTAGCCCTAGTAAGGCTCCGAGGTTGGATGGAACACACGCTAGCTTCTACCAATCCTACTGGGATATAGTGGGAGAAGAAACCATCAACATGTGCCTCCAAGTGCTAAATGAGAACGCGGACATCTCCCCTATTAACAAAACAGCCATTGTCCTCATTCCCAAGGTTAAGGATCCAAAGAAGATGCAAGACTACAGACCGATTAGCCTCTGCAATGTCAGTTATAAAATAATAGCAAAAACGATCGCTAACCGTTTCAAAAAAGTCCTAGACAAATCATCTCTCCTTCCCAAGCAGCCTTTGTTCCTGGTAGGCTGA

mRNA sequence

ATGGATGACAGTGGGGTGTGGAGGGAGAATGAAAGGGAGATCGCTCGGGTGGCTTTAGACTACTTCAAGGAGCTTTTTGACTCTTCTACTCCGAATGAGCAGGCTATCGAGAAAGTGATAGATTGTGTGCAAAATAGAATCCCTGATCAGACTTGTCAAGCCCTTGAGCAACCTTACTCTAAAGATGAGATCGAGGTTGCTATGAAGAGTATTAGCCCTAGTAAGGCTCCGAGGTTGGATGGAACACACGCTAGCTTCTACCAATCCTACTGGGATATAGTGGGAGAAGAAACCATCAACATGTGCCTCCAAGTGCTAAATGAGAACGCGGACATCTCCCCTATTAACAAAACAGCCATTGTCCTCATTCCCAAGGTTAAGGATCCAAAGAAGATGCAAGACTACAGACCGATTAGCCTCTGCAATGTCAGTTATAAAATAATAGCAAAAACGATCGCTAACCGTTTCAAAAAAGTCCTAGACAAATCATCTCTCCTTCCCAAGCAGCCTTTGTTCCTGGTAGGCTGA

Coding sequence (CDS)

ATGGATGACAGTGGGGTGTGGAGGGAGAATGAAAGGGAGATCGCTCGGGTGGCTTTAGACTACTTCAAGGAGCTTTTTGACTCTTCTACTCCGAATGAGCAGGCTATCGAGAAAGTGATAGATTGTGTGCAAAATAGAATCCCTGATCAGACTTGTCAAGCCCTTGAGCAACCTTACTCTAAAGATGAGATCGAGGTTGCTATGAAGAGTATTAGCCCTAGTAAGGCTCCGAGGTTGGATGGAACACACGCTAGCTTCTACCAATCCTACTGGGATATAGTGGGAGAAGAAACCATCAACATGTGCCTCCAAGTGCTAAATGAGAACGCGGACATCTCCCCTATTAACAAAACAGCCATTGTCCTCATTCCCAAGGTTAAGGATCCAAAGAAGATGCAAGACTACAGACCGATTAGCCTCTGCAATGTCAGTTATAAAATAATAGCAAAAACGATCGCTAACCGTTTCAAAAAAGTCCTAGACAAATCATCTCTCCTTCCCAAGCAGCCTTTGTTCCTGGTAGGCTGA

Protein sequence

MDDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIVLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDKSSLLPKQPLFLVG

Homology

[Close]

BLAST of Lcy01g008460 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-13
Identity = 47/176 (26.70%), Postives = 90/176 (51.14%), Query Frame = 0


Query: 3   DSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSKD 62
           + G   E+   I   A  +++ LF     +  A E++ D +   + ++  + LE P + D
Sbjct: 394 EDGTPLEDPEAIRDRARSFYQNLFSPDPISPDACEELWDGLP-VVSERRKERLETPITLD 453

Query: 63  EIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIVL 122
           E+  A++ +  +K+P LDG    F+Q +WD +G +   +  +   +        +  + L
Sbjct: 454 ELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSL 513

Query: 123 IPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL------DKSSLLPKQPLF 173
           +PK  D + ++++RP+SL +  YKI+AK I+ R K VL      D+S  +P + +F
Sbjct: 514 LPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIF 568

[Close]

BLAST of Lcy01g008460 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-13
Identity = 44/152 (28.95%), Postives = 83/152 (54.61%), Query Frame = 0


Query: 13  EIARVALDYFKELFDSSTPNEQAIEKVID-CVQNRIPDQTCQALEQPYSKDEIEVAMKSI 72
           EI ++  +Y+K+L+     N + I++ ++ C   R+  +  + L +P S  EI   ++++
Sbjct: 405 EIQKILNEYYKKLYSHKYENLKEIDQYLEACHLPRLSQKEVEMLNRPISSSEIASTIQNL 464

Query: 73  SPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIVLIPKV-KDPK 132
              K+P  DG  + FYQ++ + +    +N+   +  E    +   +  I LIPK  KDP 
Sbjct: 465 PKKKSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPT 524

Query: 133 KMQDYRPISLCNVSYKIIAKTIANRFKKVLDK 163
           + ++YRPISL N+  KI+ K + NR ++ + K
Sbjct: 525 RKENYRPISLMNIDAKILNKILTNRIQQHIKK 556

[Close]

BLAST of Lcy01g008460 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 75.5 bits (184), Expect = 6.7e-13
Identity = 51/176 (28.98%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQ-NRIPDQTCQALEQPYS 61
           ++ G    +  EI      ++K L+ +   N   ++K +D  Q  ++       L  P S
Sbjct: 402 NEKGDITTDPEEIQNTIRSFYKRLYSTKLENLDEMDKFLDRYQVPKLNQDQVDHLNSPIS 461

Query: 62  KDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAI 121
             EIE  + S+   K+P  DG  A FYQ++ + +      +  ++  E    +   +  I
Sbjct: 462 PKEIEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATI 521

Query: 122 VLIPK-VKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDKSSLLPKQPLFLVG 176
            LIPK  KDP K++++RPISL N+  KI+ K +ANR ++ + K+ + P Q  F+ G
Sbjct: 522 TLIPKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHI-KAIIHPDQVGFIPG 576

[Close]

BLAST of Lcy01g008460 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.3e-12
Identity = 45/163 (27.61%), Postives = 83/163 (50.92%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDC-VQNRIPDQTCQALEQPYS 61
           +D G    +  EI     +Y+K L+ +   N + ++  +D     R+  +  ++L +P +
Sbjct: 395 NDKGDITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPIT 454

Query: 62  KDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAI 121
             EI   + S+   K+P  DG  A FYQ Y + +    + +   +  E    +   + +I
Sbjct: 455 GSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASI 514

Query: 122 VLIPKV-KDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDK 163
           +LIPK  +D  K +++RPISL N+  KI+ K +ANR ++ + K
Sbjct: 515 ILIPKPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKK 557

[Close]

BLAST of Lcy01g008460 vs. ExPASy TrEMBL
Match: A0A803QP43 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 8.5e-35
Identity = 75/160 (46.88%), Postives = 103/160 (64.38%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSK 61
           DD+  W+ NE +I  +A+ YFK+LF  +       E +  CV NR+       L +P+++
Sbjct: 508 DDNQQWKTNEEDIENIAITYFKQLFTKANGGVAIQEILNRCVPNRLNIDDNSKLLEPFTR 567

Query: 62  DEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIV 121
           DE++ +M  I P KAP  DG    F+Q  WD VG+E IN CL +LN NAD SPIN+T I 
Sbjct: 568 DEVQASMFHIHPLKAPGKDGLPGLFFQKSWDTVGKEVINACLDILNNNADCSPINETLIC 627

Query: 122 LIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLD 162
           L+PKV  P KM ++RPISLCNV YK+++K +ANR KK L+
Sbjct: 628 LMPKVPKPTKMFEFRPISLCNVVYKVVSKCLANRMKKCLN 667

[Close]

BLAST of Lcy01g008460 vs. ExPASy TrEMBL
Match: A0A2N9GPZ7 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29430 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33
Identity = 72/159 (45.28%), Postives = 107/159 (67.30%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSK 61
           D  GVW+  + +IA +A+DYF+ +F SS P+ ++I  V+  +++ + +     L+  ++K
Sbjct: 246 DRDGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTK 305

Query: 62  DEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIV 121
           DE+ +A+K + P+KAP  DG  A FYQ+YWDIVG E     L +L+    +  IN T I 
Sbjct: 306 DEVSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRKINYTHIA 365

Query: 122 LIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL 161
           LIPKVK+P+ + D+RPISLCNV YKI++K +ANR KKVL
Sbjct: 366 LIPKVKNPENITDFRPISLCNVIYKIVSKVLANRLKKVL 404

[Close]

BLAST of Lcy01g008460 vs. ExPASy TrEMBL
Match: A0A2N9IPS8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS55418 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33
Identity = 72/159 (45.28%), Postives = 107/159 (67.30%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSK 61
           D  GVW+  + +IA +A+DYF+ +F SS P+ ++I  V+  +++ + +     L+  ++K
Sbjct: 821 DRDGVWQTEKTKIAEIAVDYFQGIFTSSNPSAESITTVLQGMESVVTNAMNDQLQAEFTK 880

Query: 62  DEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIV 121
           DE+ +A+K + P+KAP  DG  A FYQ+YWDIVG E     L +L+    +  IN T I 
Sbjct: 881 DEVSLALKQMYPTKAPGPDGMSAIFYQTYWDIVGPEVTQAILSILHSGYMLRKINYTHIA 940

Query: 122 LIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL 161
           LIPKVK+P+ + D+RPISLCNV YKI++K +ANR KKVL
Sbjct: 941 LIPKVKNPENITDFRPISLCNVIYKIVSKVLANRLKKVL 979

[Close]

BLAST of Lcy01g008460 vs. ExPASy TrEMBL
Match: A0A803NFM8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-33
Identity = 74/160 (46.25%), Postives = 106/160 (66.25%), Query Frame = 0


Query: 1   MDDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYS 60
           ++D GV   ++ ++ +V   Y+  LF S   N +A++ V+D +   I D+  Q+L  P++
Sbjct: 771 INDQGVTVRSKPDLTKVICSYYDTLFTSDGVNPEALQSVLDAIPATITDEMNQSLICPFT 830

Query: 61  KDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAI 120
            DE+  A+KS+SP K+P  DG  A FYQ+YW+IVG     + L VLNE  D+S +NK+ I
Sbjct: 831 NDEVVSALKSMSPDKSPGSDGMSAMFYQNYWNIVGNSVTEIVLGVLNEGTDVSQLNKSII 890

Query: 121 VLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL 161
            L+PKV +P  M DYRPISLCNV YK+I+KTI  RF+KVL
Sbjct: 891 TLVPKVPNPIGMTDYRPISLCNVIYKLISKTIVLRFQKVL 930

[Close]

BLAST of Lcy01g008460 vs. ExPASy TrEMBL
Match: A0A803QCG6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32
Identity = 74/159 (46.54%), Postives = 103/159 (64.78%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSK 61
           +D G+    + ++ RV  +Y+  LF S   N  A+  V+D +   I     Q+L +P++ 
Sbjct: 794 NDHGISVSGKSDLTRVICNYYDSLFASEGVNPDALLTVLDAIPATITPAMNQSLTRPFTS 853

Query: 62  DEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIV 121
           DEI  A++S+SP K+P  DG  A FYQ+YW+IVG+    + L VLNE  D+S +NK+ I 
Sbjct: 854 DEIVAALQSMSPDKSPGSDGMSAMFYQNYWNIVGDSVTEIVLGVLNEGTDMSQLNKSIIT 913

Query: 122 LIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL 161
           LIPKV +P  M DYRPISLCNV YK+I+KTI  RF+KVL
Sbjct: 914 LIPKVPNPTGMSDYRPISLCNVIYKLISKTIVLRFQKVL 952

[Close]

BLAST of Lcy01g008460 vs. NCBI nr
Match: XP_023881891.1 (uncharacterized protein LOC111994244 [Quercus suber])

HSP 1 Score: 157.9 bits (398), Expect = 7.9e-35
Identity = 76/175 (43.43%), Postives = 115/175 (65.71%), Query Frame = 0


Query: 1   MDDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYS 60
           MD++G W+++   IA+VA+ YF+ ++ SS P    I +V+D +   + ++   +L Q ++
Sbjct: 212 MDENGNWQDSTEGIAKVAVSYFQTIYSSSVPTR--ISEVLDAIPTTVTEEMNHSLIQEFT 271

Query: 61  KDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAI 120
           ++EIE A+  + P+KAP  DG  A F+Q YW+IVG + + M L VLN N  +  INKT I
Sbjct: 272 REEIETALNQMHPTKAPGPDGMSAIFFQKYWNIVGNDIVCMVLDVLNSNMSMVEINKTNI 331

Query: 121 VLIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLDKSSLLPKQPLFLVG 176
            L+PK+K+P KM D+RPISLCNV YK+I+K +ANR K +L +  +   Q  FL G
Sbjct: 332 TLVPKIKNPTKMSDFRPISLCNVVYKLISKVLANRLKNILPQ-IISENQSAFLSG 383

[Close]

BLAST of Lcy01g008460 vs. NCBI nr
Match: XP_023878301.1 (uncharacterized protein LOC111990748 [Quercus suber])

HSP 1 Score: 153.7 bits (387), Expect = 1.5e-33
Identity = 73/159 (45.91%), Postives = 107/159 (67.30%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSK 61
           D+ G W +NE  IA+ A+ YF  ++ SS P++  IE+V + +  ++ ++  ++L + ++K
Sbjct: 337 DEQGRWCDNEESIAQAAISYFNNIYSSSHPSQ--IEEVTEAIPFKVTEEMNESLIREFTK 396

Query: 62  DEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIV 121
           +E+ VA+K I P+KAP  DG  A F+Q YW IVG    +M L VLN N  I  +NKT I 
Sbjct: 397 EEVAVALKQIHPNKAPGPDGMSAVFFQKYWSIVGNNVTDMVLNVLNHNLPIPELNKTNIS 456

Query: 122 LIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL 161
           LIPK  +PK+M D+RPISLCNV YK+I+K +ANR K +L
Sbjct: 457 LIPKTNNPKRMTDFRPISLCNVVYKLISKILANRLKPLL 493

[Close]

BLAST of Lcy01g008460 vs. NCBI nr
Match: XP_012836341.1 (PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata])

HSP 1 Score: 151.8 bits (382), Expect = 5.6e-33
Identity = 75/174 (43.10%), Postives = 111/174 (63.79%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSK 61
           DD G+WR ++R+I ++  +YF++LF S+ P+EQ I++V+  V+N I  +  Q L  P++ 
Sbjct: 365 DDGGIWRNSQRDIEKIISEYFEQLFSSTGPSEQEIDEVLVNVRNWISGEAAQLLSMPFTA 424

Query: 62  DEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIV 121
           DE+  A+  ++P K+P  DG    FY  YW I+G + +   L  LN +     +N T IV
Sbjct: 425 DEVTRAISQMAPLKSPGPDGLPVIFYTKYWHILGSDVVTCVLDFLNHHNLPPTLNYTFIV 484

Query: 122 LIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVLD------KSSLLPKQ 170
           LIPKVK P+K+ DYRPISLCNV YK  AK +ANR K VL+      +S+ +PK+
Sbjct: 485 LIPKVKKPEKITDYRPISLCNVIYKFGAKVVANRLKLVLNDLISPTQSAFVPKR 538

[Close]

BLAST of Lcy01g008460 vs. NCBI nr
Match: XP_023912601.1 (uncharacterized protein LOC112024185 [Quercus suber])

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-32
Identity = 70/159 (44.03%), Postives = 104/159 (65.41%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSK 61
           ++ G+W +++  I   AL YF+ ++ SS+P    I +VI+ +  R+ D+    L + ++ 
Sbjct: 154 NEDGIWCDSKESITATALSYFENIYTSSSPT--GINEVINAIPRRVTDEMNSELTKTFTS 213

Query: 62  DEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIV 121
           +E+  A+K + P+KAPR DG  A F+ +YWDIVG    NM L VLN N  ++ INKT I 
Sbjct: 214 EEVLKALKQLHPTKAPRPDGMSAIFFHNYWDIVGPSITNMVLNVLNSNLPMTEINKTNIS 273

Query: 122 LIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL 161
           LIPK   P +M ++RPISLCN +YKII+K +ANRFK +L
Sbjct: 274 LIPKTNQPVRMTEFRPISLCNTTYKIISKVLANRFKAIL 310

[Close]

BLAST of Lcy01g008460 vs. NCBI nr
Match: XP_030939839.1 (uncharacterized protein LOC115964720 [Quercus lobata])

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-32
Identity = 76/159 (47.80%), Postives = 101/159 (63.52%), Query Frame = 0


Query: 2   DDSGVWRENEREIARVALDYFKELFDSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYSK 61
           DD+G W +    IA VA+ YF+ ++ SS P   + + V   +  R+ D+  + L + +SK
Sbjct: 271 DDNGTWYDTNDTIAEVAVRYFRNIYTSSQP--ASFDDVTAAIPTRVTDEMNRGLIKEFSK 330

Query: 62  DEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAIV 121
           DEI +A+K + P+KAP  DG  A F+  YWDIVG    NM L VLN N  I  +NKT I 
Sbjct: 331 DEILIALKQMHPTKAPGPDGMSAIFFHKYWDIVGNSVTNMVLNVLNSNMPIVELNKTNIA 390

Query: 122 LIPKVKDPKKMQDYRPISLCNVSYKIIAKTIANRFKKVL 161
           LIPK K P +M D+RPISL NV+YKIIAK ++NR K VL
Sbjct: 391 LIPKKKSPTQMADFRPISLSNVAYKIIAKVLSNRLKIVL 427

[Close]

BLAST of Lcy01g008460 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-11
Identity = 44/148 (29.73%), Postives = 67/148 (45.27%), Query Frame = 0


Query: 3   DSGVWRENEREIARVALDYFKELF--DSSTPNEQAIEKVIDCVQNRIPDQTCQALEQPYS 62
           D  V  EN  ++  + + Y+  L   DS      +++++ D    R  D     L    S
Sbjct: 473 DDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPS 532

Query: 63  KDEIEVAMKSISPSKAPRLDGTHASFYQSYWDIVGEETINMCLQVLNENADISPINKTAI 122
             EI  A+ ++  +KAP  D   A F+   W +V + TI    +       +   N TAI
Sbjct: 533 DKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAI 592

Query: 123 VLIPKVKDPKKMQDYRPISLCNVSYKII 149
            LIPKV    ++  +RP+S C V YKII
Sbjct: 593 TLIPKVTGVDQLSMFRPVSCCTVVYKII 620

The following BLAST results are available for this feature:

BLAST of Lcy01g008460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P14381	1.0e-13	26.70	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P08548	1.4e-13	28.95	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]
P11369	6.7e-13	28.98	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
O00370	3.3e-12	27.61	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]

BLAST of Lcy01g008460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803QP43	8.5e-35	46.88	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A2N9GPZ7	1.2e-33	45.28	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A2N9IPS8	1.2e-33	45.28	Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F...	[more]
A0A803NFM8	1.6e-33	46.25	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803QCG6	1.8e-32	46.54	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lcy01g008460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023881891.1	7.9e-35	43.43	uncharacterized protein LOC111994244 [Quercus suber]	[more]
XP_023878301.1	1.5e-33	45.91	uncharacterized protein LOC111990748 [Quercus suber]	[more]
XP_012836341.1	5.6e-33	43.10	PREDICTED: uncharacterized protein LOC105956976 [Erythranthe guttata]	[more]
XP_023912601.1	1.6e-32	44.03	uncharacterized protein LOC112024185 [Quercus suber]	[more]
XP_030939839.1	2.1e-32	47.80	uncharacterized protein LOC115964720 [Quercus lobata]	[more]

BLAST of Lcy01g008460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	1.7e-11	29.73	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19446	REVERSE TRANSCRIPTASES	coord: 2..161
None	No IPR available	PANTHER	PTHR19446:SF440	SUBFAMILY NOT NAMED	coord: 2..161
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 30..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g008460.1	Lcy01g008460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity