Lcy01g008070 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTAAGTAAATAACTGAATTACACTGAAATATTAATTATATATATTATCAAAAAGCATCTTAAAATCATATGTAATGAATGTCATACTAGGATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTGATTGGGTAGGGGTCTGGGCTGGGTGCTGCGGGATGTTACTGGAGATGTGCTCGAGGCAGGTTGTGAACCGGTCACGGGACCCCTTGGGGTGGTTATGTTGGAAATGCAGGCGATTCGAGCTGGATTGTTGGTTGTTGGTGGGATGAGGCTTCCTCGCCTATTGGTGGAATCAGATTGTCTGACTATTATAAATCTTTTAAATGGTGAGGAGGAAAACTTCACCTTAGTCCGGTCAATTGCTATGGAGGTGCAGCGACTTTCTTCCCGTTTGGTGGGAACACAGTTTAAGCATATTCAGCGAGGCCAAAATGTGGTGGCTGACTTGTTGGCGCAACGAGCAAGGATTAATGGAGATCATGGTTCTTGGTTTTCAGGTTTCCCAAGTTGGCTACTGGAAGCGATAGATGGTGACAAACGATGTTTAAACTTATTGTAA ATGCTTAAGGGTCTGGGCTGGGTGCTGCGGGATGTTACTGGAGATGTGCTCGAGGCAGGTTGTGAACCGGTCACGGGACCCCTTGGGGTGGTTATGTTGGAAATGCAGGCGATTCGAGCTGGATTGTTGGTTGTTGGTGGGATGAGGCTTCCTCGCCTATTGGTGGAATCAGATTGTCTGACTATTATAAATCTTTTAAATGGTGAGGAGGAAAACTTCACCTTAGTCCGGTCAATTGCTATGGAGGTGCAGCGACTTTCTTCCCGTTTGGTGGGAACACAGTTTAAGCATATTCAGCGAGGCCAAAATGTGGTGGCTGACTTGTTGGCGCAACGAGCAAGGATTAATGGAGATCATGGTTCTTGGTTTTCAGGTTTCCCAAGTTGGCTACTGGAAGCGATAGATGGTGACAAACGATGTTTAAACTTATTGTAA ATGCTTAAGGGTCTGGGCTGGGTGCTGCGGGATGTTACTGGAGATGTGCTCGAGGCAGGTTGTGAACCGGTCACGGGACCCCTTGGGGTGGTTATGTTGGAAATGCAGGCGATTCGAGCTGGATTGTTGGTTGTTGGTGGGATGAGGCTTCCTCGCCTATTGGTGGAATCAGATTGTCTGACTATTATAAATCTTTTAAATGGTGAGGAGGAAAACTTCACCTTAGTCCGGTCAATTGCTATGGAGGTGCAGCGACTTTCTTCCCGTTTGGTGGGAACACAGTTTAAGCATATTCAGCGAGGCCAAAATGTGGTGGCTGACTTGTTGGCGCAACGAGCAAGGATTAATGGAGATCATGGTTCTTGGTTTTCAGGTTTCCCAAGTTGGCTACTGGAAGCGATAGATGGTGACAAACGATGTTTAAACTTATTGTAA MLKGLGWVLRDVTGDVLEAGCEPVTGPLGVVMLEMQAIRAGLLVVGGMRLPRLLVESDCLTIINLLNGEEENFTLVRSIAMEVQRLSSRLVGTQFKHIQRGQNVVADLLAQRARINGDHGSWFSGFPSWLLEAIDGDKRCLNLL Homology
BLAST of Lcy01g008070 vs. ExPASy TrEMBL
Match: B8AFN2 (RNase H domain-containing protein OS=Oryza sativa subsp. indica OX=39946 GN=OsI_06781 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 8.3e-12 Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 0
BLAST of Lcy01g008070 vs. ExPASy TrEMBL
Match: A0A7N2N656 (RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 5.4e-11 Identity = 47/136 (34.56%), Postives = 69/136 (50.74%), Query Frame = 0
BLAST of Lcy01g008070 vs. ExPASy TrEMBL
Match: A0A7N2LIP9 (RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 7.0e-11 Identity = 45/136 (33.09%), Postives = 70/136 (51.47%), Query Frame = 0
BLAST of Lcy01g008070 vs. ExPASy TrEMBL
Match: A0A7N2LIC5 (RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 9.2e-11 Identity = 46/136 (33.82%), Postives = 69/136 (50.74%), Query Frame = 0
BLAST of Lcy01g008070 vs. ExPASy TrEMBL
Match: A0A7N2L9Q3 (RNase H domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.6e-10 Identity = 46/136 (33.82%), Postives = 67/136 (49.26%), Query Frame = 0
BLAST of Lcy01g008070 vs. NCBI nr
Match: EEC72931.1 (hypothetical protein OsI_06781 [Oryza sativa Indica Group]) HSP 1 Score: 80.1 bits (196), Expect = 1.7e-11 Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 0
BLAST of Lcy01g008070 vs. NCBI nr
Match: KAG2726715.1 (hypothetical protein I3760_01G126500 [Carya illinoinensis]) HSP 1 Score: 74.3 bits (181), Expect = 9.4e-10 Identity = 50/131 (38.17%), Postives = 67/131 (51.15%), Query Frame = 0
BLAST of Lcy01g008070 vs. NCBI nr
Match: XP_030945898.1 (uncharacterized protein LOC115970400 [Quercus lobata]) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-09 Identity = 47/136 (34.56%), Postives = 66/136 (48.53%), Query Frame = 0
BLAST of Lcy01g008070 vs. NCBI nr
Match: XP_023902041.1 (uncharacterized protein LOC112013897 [Quercus suber]) HSP 1 Score: 72.0 bits (175), Expect = 4.7e-09 Identity = 43/135 (31.85%), Postives = 68/135 (50.37%), Query Frame = 0
BLAST of Lcy01g008070 vs. NCBI nr
Match: XP_023916941.1 (uncharacterized protein LOC112028476 [Quercus suber]) HSP 1 Score: 72.0 bits (175), Expect = 4.7e-09 Identity = 44/136 (32.35%), Postives = 68/136 (50.00%), Query Frame = 0
BLAST of Lcy01g008070 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10 Identity = 39/128 (30.47%), Postives = 67/128 (52.34%), Query Frame = 0
BLAST of Lcy01g008070 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 55.1 bits (131), Expect = 5.5e-08 Identity = 38/134 (28.36%), Postives = 70/134 (52.24%), Query Frame = 0
BLAST of Lcy01g008070 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 45.1 bits (105), Expect = 5.7e-05 Identity = 31/125 (24.80%), Postives = 56/125 (44.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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