Lcy01g007590 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g007590
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr01: 14217043 .. 14222704 (-)
RNA-Seq Expression	Lcy01g007590
Synteny	Lcy01g007590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACAAATGGCAGAGAAAAACATCCACAAAAGGCGGCGAGAAAATCCCACAACCAGCGAAGAAAAATCCAAGATAACAACGACGAAAAGGTAATGAGAGTGAACGATGGTGATGAGAGTGACAGAGAAGAGATTTGGGGAGAGAGAACTGAATCGAGTGGGTCTTGCTGCGCGATGAGGGAGAACGATAGAGAGAAGACAAGCCTTTGCGCGAGTGTCTGGCTGTCGGCGTTGAAACTTGTCGAGTGAAAGAGGAGAGATGAAGCGAGGGGGAAAAGAGATGGTCGGCCGGATTTGCGAGAGGAAGGAAATTGAGAGAGGGTGGAACGGCGTGGTTTGAAAGAGAGATGTGAGATTTTAGGGTTATTTTAAATATTCTTGACATTTAAAATGCGACAAGTAAATTACGAACAAACTTGACATTTCTGAAATGTCAAGTTTTATGTTCATGTGAATATTTCCGAAACATTTTGTCAACCTCCACGTTTTTTTTCATTTTTCTTGACATTTTTAATTAAAAAGTAATTTTACTTGACATTTTTTCATAAAAACATCAAGTATTTAAAAGTTGCAAATGCCAAGTAATATTGAAGTTTGTAGTAGTATACATGATACAGAATAAAAGATGAATGCTTGCACTAAACGAATCTCTTTCTTTGATCTTTCGTCACCTCCCTCTCCTCTCATATGAACAAATGGTTTGTTTTTATAGGCTCAAGGAGGCTGACTTCACCAAGGAACTAGCTTGCATGCTCCACTTTTCTTTACGCCAGCTCACTGCTTTGCCACTTGTCAGCACCACCTTTGGACAGCTCGCGCTTGTACTTCTTCACGTGATAGCTCCAGCGCCTGCGATAAAAGATAACTTGGGCAAGATAACGATCTACAGTATATGCGTTAGACAGAAAATTAATTGCATTATCTCGCCACATCAAGGATCTACACACTGAAGGCATTACTATCGCAATCCTCTGATTTTTTGTGCTGAACCGGCACATCTCATATATTTTGCTGCCTCTTTTAATTTAAATTTAGATGATAAATAACTTGCGTTTTGCAATTTATCAAGCATGCTGAAAAAACTATAAAATCTAATTCTAATTTACATAAAGTAACAAGTTACTCTCGTTGATGACTCGGATTAATTTCACCAACTACTTGAGAAAAAATCATGAACAACTTGGAACACCACCATAGGGAAACACTGGTATTCTCTAGGGAATTTGAGGCGAAGGCAGTGGGAACATTTTTCTTGAGTTTAGGGAGAATTGAGTTAAGTGAGTGTATCCAGCTGAGAGGAATTCTATGGTTTATATAGAATGTCATATCTCTTTTCCTATTCATAATAGGTTAGGGATCCTTTTCCTACTCATAATAGGTTAGGGATCCTTTTCCTACTCATAATAGGTTAGGGATATGTTTAATTAATTAATAACAATAAATTACTTTTCCCAGTTGTAATAGGATAGGGATGTTGGGTTTTATGTCCTAAAACTTGTAGATAGTGAATGTTAACGAATTGTATACGTGTGTTCATAAAATGTAATTGAGGTATCTACAATAAAGTGTTATTGTTAATTTAAGTTTAGAATTGCACAATATGACCCAAGTCCAATAAACTAAGATCCAAGGTTTTTTATATGTAACTTAAACTAGTATGTGGGGAGATACGGGGATCAATGTTCAAGTAACAACCTAAAGGTCTATAGTACAGGGATTAAACTGGGTAACTTATCCTGGTAACACTATGTGATACGACCCGTTTTGTATTCGATACAGATGTATTGGTCCAAAGGGTCCATGTAATAGACATGCGAGTGGGGGTATCCTATTGTTTCCTTTTGGAGTGGTTAAAAATATAGATGAATTTTACTCCAAAATATTGTGCAAGCATACACAATCTGCAACAAGTGATAAGTATTTATCGTATCCACAGGGTCTTGAATAGCCTCACTCAATTGATTTTAATTAGCCTTTAATGATTTCAAAAGTGGTTAAATTGGTTGGTGATAGGACCAAATTAGTCCTATTTATTTTTTATTAACCTAAGCCTGTTAGAGTCCACTTTACAGTTTATTTGTCTATTTTGTAGATAATTTGTGCATTGAAGACATCAGGGACGAATCACACAATTTGGAGCTAATTCGGGGGATTTAGAGAGTTTTCGAGCTAACTTGAAGTCCTTGGATCTCGAGGAGGTGAGAAGACCGTGAGGATCGCGAGCCCAAAGAATGGTTCCATGGAGTCAAAGGTTCGAGTCCCAAACCGAGCAAGCATCAAAGAAGACCAAATAAAGAAGTGAAGGCATGCTGAACAAAGGCCAGGTGTCAAGACGTCGTGGCCCATTCTCGAACCTTAGGACCAAACGACATGGCGTCGAGACGCCATGCCTAGCGTCTCGATGTCACGATTAATTTTTCTATATAAACCCTCATTTTATTCCGCCGTTTAGGTTAGGAAATGTTGTGATTTTTGGTCCCTTTTGCGATTTCTCTCTGTTTTTCATGACCAAACCTCTGTATTGTAAGTTTTATTGCTAAATTCGCTTGTATTTCTTCATTATAATTGCATAGGGTCACGAGTTTTAGTCAGATTTACCACCGTTTAAACCCATTGACGTCGATTGGATGATTCTTGGTATATAGAATGTGCTTCTTTGTGAGTCTTATGTTCTGGTTTCTTCTTTTAATTTACCTTGCTATTGTATTTTGGATTCGGTTTGTAGAATAAGCATGTGCAATAGGTTAGATTGAAACCCTAACTCGCAGCTCGTATGTTTATTATATGCTAAATGTGTAGTACATAGACTGATTCATGGGCATGGGGTGCCAAGAGAAGTTCTCTGACTTTGTTGTTTTGCATGATAGGACTAAGTTCCAAAATAGCGTTAGAAATAATGTCCTAATCAATCCACTAGACTTAAGGCAATTGGTTAATTGTTTGATTTGATGGCTTAATCGGATTAATTAGTTAATCAATTAGGGTCTAATTCGATGGACGGTGTATGATCGGGTTAGATAGCTTAGGTGGGTTTAGGGTCTTTTCTGGGTTCAAATTAGATTGATTGGAGAATTAAGCAAGTTAAGTTAGCCTTAAAATAGGTAGAAGGACAATGATCAAAATAAACCATTCAATCCCAAGAATCTCCCTAATCGGTGTCACTGGTTTAATTAATTTTCTTGCCAATTTATGTTTCATGCAAATGAAGGATTGGAATTCCGTAATTTCGTAAAGCGAAAGCCTGATTGGGACCGATTCGTAATTAATTTTGTTTAATCTAAAATACCAATACATTGGCAATAATCTTAGAACTATTCTAAATTTAGATTTAAATCTAATTTATATAGTAACAAATTACTTATTCTCGTTGACGACTCAGATTAAATTCACCAACTGCTTGTGAAATAATCACGAACTACTGTGAACACCACCACTATGGCTACACCGGTATGACTCTAAGACTTCTAGAGGTAGGAGACTGGTGGGAGTCTAGAGGGAGCCTTCAGGGGAACTCTCTAAGAGTAGGAGAATGAATGGGATGCCTTTCACCCCACCCTAGGAGTCCTATTTATAGGAAAAAGGCCAAGACGTTTTTCCTTATAGGAAAAGGTCATGAATAAGATCTAATCAAATCTATTATCTTATTCATATTTAATTTAATAAATAATTAATTAATTACCCAATTAAATATCATATATTTAATCTTAGGGATTTTATTAAATTATTTATATTAATGTGAATCTAATTCATATTAATTATTTGAACTCTTTCAAATATTTTCTCTCAAGAATTAATTTTGAAATTAATTCAAAATTATATTATAAAGTTTCATAAACTTTATATTATAATGTATCAATATACATTATATGATTCCCCTAAATAAATTGAACACTTTCAATTTACAATTTATAATTCATTGCCTCAAGTCTCTTTACGAGCTACCAGTGGGACCTAATGGACCTACACATCAGAAGCTCCAACGATACAAGACTAATTGACTAAATTCATTAACCAAGTTAGTCAACATTCGTTAAATGTGGGCCACCGCACTAAAGACCCACAACTGCACTCTTCTCACTGTAGAATATTTCTGTGTCCACGGATATCGACCAATGCAGTATGTTAATCCTTCACGTGTGTTCGTAACACCAACTGGGTCAAATTATCGTTTTACCCCTGGGTTACCTATGGTTCCTTAAGTACCACTGATCCATCTAATGAACAACTTGTTTAGGGTCCAACCACTAAACAGGAGTTCCTCTCGGGCCAGGAGAGAACGACGCACCTTTGTTTAAGCCCTGGAATCAGTCCTTAAGGGAACACACATCTACTTACCCCAATAGGGGAAGGAGTGAATTCCATCTTGTACTATTATGTTCCCAGCCCCCATTCGGTCTTGCCCCTAAAATGGTAGGATTATTGAGTCGGCGAACTGGCCACTCTCACCCATACAAATCTAAGGACAATCCCTCCGGAAAGGGGTTCATAACAGACTCAGGATTTAAGATTGAGTTTCCTAGGTCATCCTATTGAAATAGAAACCTAAACTAGTTAACGGCGTTACATCTAGTGGTTACTATTTTGCGGTCCGATCTTATGCAAACTCATTGCATAGGATACCCCCACCCGCATATCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAGGTGGGTCGTATCACATAGTGTTACCAAGATAAGGTACCCAACCTTATCGCTATACTATAGACCTTTTAGGTTGTTACTTGGACACCGATCCCCGCATGTCCCCACATACTAGTCCAAGTTTCATTTAAACAACCTTGGATCTTAGTTTATTGGATTTAGGTTTTATTAATGGAAACTCAATTATTCAATAACCAAATTACTTAATCACTCAAATAACGCTTTATTGAGATCGATTAATTTGTTTCATTTACTATCTATGAGTTTTAGGGCATAAAACCCAACAGCAATTTAATTTCTTGTCATTTAAATTCTCATATTTTAAATTCATTGCATGTTGATTCCCCTTCGTATGAAATCCTCCCTTTGCCGCTTTTAAACTCAAAATAAATAAGAAGTAAATAACCAACCACCACTCCTTGTGATCGACCCCGACCACTACTACTGCAAGTAGTTTAGTGATCGTTGATTATAAATTTATTTGATCTGGACCTTCGACAAGTCCCGTCAAATTGGCGCCATCAAATTCCTTTTGATTCGACCTCCATTAACCAATTCTTTGGCCTTTCTCACATAAATCGTGATGGGTACAACGATTATGTGAGTAACTATTTTGATGCCCATCAGATCATTGAGCATTTATGCAGGCCTAGGGCAGAATGTGAGTAACTAAGAAAAGCGCGACTCTATTATTCGCTATAGCGACCAATCGCTCGGTAGACATAGAGAATATTATTCATACTTCCATGCGCTGGATTCGCAGAGGAGCCACACTACCGTAGGGTTAGGACACCCTTCCCTCATCATAGCACTCTGTAGGAATGCTGGGGTCGAGTGGGGCCCCCGCGAGGAGATTAGTCATCCTGCAGCTGTGATCAATGGGAACTTCATCATGACCAGACTTAGGGAGCCTAGACCTTGGGTAGCCCGCCCACCACCACCTCCACAACAGGAAGAACCAGAAGATGAGCCCCAAGAGTAG

mRNA sequence

ATGGCCACAAATGGCAGAGAAAAACATCCACAAAAGGCGGCGAGAAAATCCCACAACCAGCGAAGAAAAATCCAAGATAACAACGACGAAAAGGTAATGAGAGTGAACGATGGTGATGAGAGTGACAGAGAAGAGATTTGGGGAGAGAGAACTGAATCGAGTGGGTCTTGCTGCGCGATGAGGGAGAACGATAGAGAGAAGACAAGCCTTTGCGCGAGTGTCTGGCTGTCGGCGTTGAAACTTGTCGAGCTCAAGGAGGCTGACTTCACCAAGGAACTAGCTTGCATGCTCCACTTTTCTTTACGCCAGCTCACTGCTTTGCCACTTGTCAGCACCACCTTTGGACAGCTCGCGCTTAGGAGCCACACTACCGTAGGGTTAGGACACCCTTCCCTCATCATAGCACTCTGTAGGAATGCTGGGGTCGAGTGGGGCCCCCGCGAGGAGATTAGTCATCCTGCAGCTGTGATCAATGGGAACTTCATCATGACCAGACTTAGGGAGCCTAGACCTTGGGTAGCCCGCCCACCACCACCTCCACAACAGGAAGAACCAGAAGATGAGCCCCAAGAGTAG

Coding sequence (CDS)

ATGGCCACAAATGGCAGAGAAAAACATCCACAAAAGGCGGCGAGAAAATCCCACAACCAGCGAAGAAAAATCCAAGATAACAACGACGAAAAGGTAATGAGAGTGAACGATGGTGATGAGAGTGACAGAGAAGAGATTTGGGGAGAGAGAACTGAATCGAGTGGGTCTTGCTGCGCGATGAGGGAGAACGATAGAGAGAAGACAAGCCTTTGCGCGAGTGTCTGGCTGTCGGCGTTGAAACTTGTCGAGCTCAAGGAGGCTGACTTCACCAAGGAACTAGCTTGCATGCTCCACTTTTCTTTACGCCAGCTCACTGCTTTGCCACTTGTCAGCACCACCTTTGGACAGCTCGCGCTTAGGAGCCACACTACCGTAGGGTTAGGACACCCTTCCCTCATCATAGCACTCTGTAGGAATGCTGGGGTCGAGTGGGGCCCCCGCGAGGAGATTAGTCATCCTGCAGCTGTGATCAATGGGAACTTCATCATGACCAGACTTAGGGAGCCTAGACCTTGGGTAGCCCGCCCACCACCACCTCCACAACAGGAAGAACCAGAAGATGAGCCCCAAGAGTAG

Protein sequence

MATNGREKHPQKAARKSHNQRRKIQDNNDEKVMRVNDGDESDREEIWGERTESSGSCCAMRENDREKTSLCASVWLSALKLVELKEADFTKELACMLHFSLRQLTALPLVSTTFGQLALRSHTTVGLGHPSLIIALCRNAGVEWGPREEISHPAAVINGNFIMTRLREPRPWVARPPPPPQQEEPEDEPQE

Homology

[Close]

BLAST of Lcy01g007590 vs. ExPASy TrEMBL
Match: A0A5D3BBY3 (Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00020 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.0e-04
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 120 RSHTTVGLGHPSLIIALCRNAGVEWGPREEISHPAAVINGNFIM 164
           +S  T GLGH SLI ALCRN GV W  +EE+  P  +++ NFIM
Sbjct: 219 KSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFIM 262

[Close]

BLAST of Lcy01g007590 vs. ExPASy TrEMBL
Match: A0A1S3C7Y0 (uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 5.0e-04
Identity = 24/44 (54.55%), Postives = 30/44 (68.18%), Query Frame = 0


Query: 120 RSHTTVGLGHPSLIIALCRNAGVEWGPREEISHPAAVINGNFIM 164
           +S  T GLGH SLI ALCRN GV W  +EE+  P  +++ NFIM
Sbjct: 157 KSGMTGGLGHSSLITALCRNEGVVWNEKEELVDPKPIMDKNFIM 200

The following BLAST results are available for this feature:

BLAST of Lcy01g007590 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g007590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BBY3	5.0e-04	54.55	Putative S-locus lectin protein kinase family protein OS=Cucumis melo var. makuw...	[more]
A0A1S3C7Y0	5.0e-04	54.55	uncharacterized protein LOC103497996 OS=Cucumis melo OX=3656 GN=LOC103497996 PE=...	[more]

BLAST of Lcy01g007590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

BLAST of Lcy01g007590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..191
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..48

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g007590.1	Lcy01g007590.1	mRNA