Lcy01g007390 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g007390
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 3-like
Location	Chr01: 12906899 .. 12907678 (-)
RNA-Seq Expression	Lcy01g007390
Synteny	Lcy01g007390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGTATCCCAGAACAAAGTTCAGAAGAAAGTTCGGTCCATGTTGTGGATGTGGAGAAATCAAGGGGAGCTAAAAAAAGTAAAGTGGGTCATTCGAGTCCAACCAAAAAGCGTAAGAATACTAAAATTTCTGTTGTTTGGGATCATTTTGAGAAAATTAAAGATTGTGATCCTAATGATCCTTATGCTAAGGGTAAATATTGTGGGGCTAAGTATGCATGTCATTCCAAGCGTAATGTTACCGGCAGTTTGAAACACCATTTAGAAAATTGTAAGAAATACCCTTATCAAAGAACGAAAGATCCAAGACAAAAACAATTGGTTTTCAAGCCTAAAGAAGCGATTGATAATTCTGAATCAAAACTTAGCTGTGAGACTTTCAATTTGAAGAATTGTAGAAGGGCCCTTGCTGAGATGATTATTCTAGATGAATTGCCTTTTAGGTTTGTGGAGAACATAGGTTTTCGAAGATTTATCAACAAATCAATAGTCTTGTTTGCACCTAATTTTGTCCTTCCATCTCGAATAACTATTGCTAGGGATGTGCTTAAGATATATGTTAGTGAGAAAAAACGTTTGAAAGACATGTTTAAGGCAAAACGTTATAGAGTTTCTCTCACTACCGACTGTTGGACTTCTGGACAAAACATCAATTACATGGTATTGACGACGCACTTTATTGATTCTGAATGGAATTTACATAAGAGGATTCTTAGTTTTTCTACAATCGAGAATCATAGGGGGGATGCCATTGGTAAAACCATTGAAAGAATTTAA

mRNA sequence

ATGGATAGTATCCCAGAACAAAGTTCAGAAGAAAGTTCGGTCCATGTTGTGGATGTGGAGAAATCAAGGGGAGCTAAAAAAAGTAAAGTGGGTCATTCGAGTCCAACCAAAAAGCGTAAGAATACTAAAATTTCTGTTGTTTGGGATCATTTTGAGAAAATTAAAGATTGTGATCCTAATGATCCTTATGCTAAGGGTAAATATTGTGGGGCTAAGTATGCATGTCATTCCAAGCGTAATGTTACCGGCAGTTTGAAACACCATTTAGAAAATTGTAAGAAATACCCTTATCAAAGAACGAAAGATCCAAGACAAAAACAATTGGTTTTCAAGCCTAAAGAAGCGATTGATAATTCTGAATCAAAACTTAGCTGTGAGACTTTCAATTTGAAGAATTGTAGAAGGGCCCTTGCTGAGATGATTATTCTAGATGAATTGCCTTTTAGGTTTGTGGAGAACATAGGTTTTCGAAGATTTATCAACAAATCAATAGTCTTGTTTGCACCTAATTTTGTCCTTCCATCTCGAATAACTATTGCTAGGGATGTGCTTAAGATATATGTTAGTGAGAAAAAACGTTTGAAAGACATGTTTAAGGCAAAACGTTATAGAGTTTCTCTCACTACCGACTGTTGGACTTCTGGACAAAACATCAATTACATGGTATTGACGACGCACTTTATTGATTCTGAATGGAATTTACATAAGAGGATTCTTAGTTTTTCTACAATCGAGAATCATAGGGGGGATGCCATTGGTAAAACCATTGAAAGAATTTAA

Coding sequence (CDS)

ATGGATAGTATCCCAGAACAAAGTTCAGAAGAAAGTTCGGTCCATGTTGTGGATGTGGAGAAATCAAGGGGAGCTAAAAAAAGTAAAGTGGGTCATTCGAGTCCAACCAAAAAGCGTAAGAATACTAAAATTTCTGTTGTTTGGGATCATTTTGAGAAAATTAAAGATTGTGATCCTAATGATCCTTATGCTAAGGGTAAATATTGTGGGGCTAAGTATGCATGTCATTCCAAGCGTAATGTTACCGGCAGTTTGAAACACCATTTAGAAAATTGTAAGAAATACCCTTATCAAAGAACGAAAGATCCAAGACAAAAACAATTGGTTTTCAAGCCTAAAGAAGCGATTGATAATTCTGAATCAAAACTTAGCTGTGAGACTTTCAATTTGAAGAATTGTAGAAGGGCCCTTGCTGAGATGATTATTCTAGATGAATTGCCTTTTAGGTTTGTGGAGAACATAGGTTTTCGAAGATTTATCAACAAATCAATAGTCTTGTTTGCACCTAATTTTGTCCTTCCATCTCGAATAACTATTGCTAGGGATGTGCTTAAGATATATGTTAGTGAGAAAAAACGTTTGAAAGACATGTTTAAGGCAAAACGTTATAGAGTTTCTCTCACTACCGACTGTTGGACTTCTGGACAAAACATCAATTACATGGTATTGACGACGCACTTTATTGATTCTGAATGGAATTTACATAAGAGGATTCTTAGTTTTTCTACAATCGAGAATCATAGGGGGGATGCCATTGGTAAAACCATTGAAAGAATTTAA

Protein sequence

MDSIPEQSSEESSVHVVDVEKSRGAKKSKVGHSSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCKKYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVENIGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWTSGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIERI

Homology

[Close]

BLAST of Lcy01g007390 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.5e-16
Identity = 69/246 (28.05%), Postives = 109/246 (44.31%), Query Frame = 0


Query: 33  SSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGA--KYACHSKRNVTGSLKHHLE 92
           ++PT  R+  K SVVW+HF  I++       A    C     Y+C SK + T  LK H+ 
Sbjct: 97  TTPTASRRRRKKSVVWEHF-TIEEMPGGVSRASCNLCKQTFAYSCGSKISGTSHLKRHI- 156

Query: 93  NCKKYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRA-------------- 152
                P  + +D +    +  P   + N++ +   E    ++ R                
Sbjct: 157 TLASCPMLKNEDMK----LSLPLATVTNNDGEGCAERVAKRHYRSTGYANAMFDQDRTCS 216

Query: 153 -LAEMIILDELPFRFVENIGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLK 212
            LA+MIIL + P   VE  GF  FI        P F +    TI   V  +Y  E++ L 
Sbjct: 217 NLAKMIILHDYPLHIVEQRGFTAFIGS----LQPRFRVIDVDTIEGQVHSVYQKERENLM 276

Query: 213 DMFKAKRYRVSLTTDCWTSGQNINYMVLTTHFIDSEWNLHKRILSFSTI-----ENHRGD 257
            +F     R+SLT   W + Q + Y+ L   FID+EW +H+R+++F  +     EN   +
Sbjct: 277 HVFSTVPGRISLTVRLWATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSPHSENSLSE 332

[Close]

BLAST of Lcy01g007390 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15
Identity = 62/218 (28.44%), Postives = 101/218 (46.33%), Query Frame = 0


Query: 33  SSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGS--LKHHLE 92
           + P K+RK  K S+VW+HF  I+  +PN   A  K C   +A  +   V G+  LK H+ 
Sbjct: 58  TQPIKRRK--KKSMVWEHF-TIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLKRHIF 117

Query: 93  NCKKYPYQRTKDPRQKQLVF--------KPKEAIDNSESKLSCETFNLKNCRRALAEMII 152
                    T D     L+          P+    +  +      FN   CR+ +A+MII
Sbjct: 118 KGTCPALIHTHDNDNNPLMSTPYTPKTDTPRRRYRSQNNASPYVAFNQDKCRQEIAKMII 177

Query: 153 LDELPFRFVENIGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKR 212
           + + P   V++ GF  F+        P+F   S   +  D +  Y++EK+ +    +   
Sbjct: 178 MHDYPLHMVQHPGFVSFVQS----IQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGIP 237

Query: 213 YRVSLTTDCWTSGQNINYMVLTTHFIDSEWNLHKRILS 241
            R  LT D WTS   + Y+ +T H+IDS+W + K++L+
Sbjct: 238 GRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLN 268

[Close]

BLAST of Lcy01g007390 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.6e-15
Identity = 70/243 (28.81%), Postives = 105/243 (43.21%), Query Frame = 0


Query: 33  SSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGS--LKHH-- 92
           S P   R+  K S+VW+HF  I+        A  K C   +A  S   + G+  LK H  
Sbjct: 57  SIPPTSRRRRKKSLVWEHF-TIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHIT 116

Query: 93  LENCKKYPYQRTKDPRQKQLVFKPKEAIDNS--------------ESKLSCETFNLKNCR 152
           L +C K   Q  K      L+  P    DN                +  +   F+ +   
Sbjct: 117 LGSCPKIKNQEHK------LLLTPAGGTDNDGEGTVERPSKRRYRYTGYANAAFDQERSC 176

Query: 153 RALAEMIILDELPFRFVENIGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRL 212
             LA+MIIL + P   V+   F  FI+       P F +    T+  +V  +Y  EK+ L
Sbjct: 177 SYLAKMIILHDYPLHIVQQPAFTTFIDS----LQPRFRVVDVETMEWEVYAVYQKEKENL 236

Query: 213 KDMFKAKRYRVSLTTDCWTSGQNINYMVLTTHFIDSEWNLHKRILSFSTIEN-HRGDAIG 257
              F     R+SL    WT+ Q + Y+ L   FIDSEW +H+R+L+F  + + H  +A+ 
Sbjct: 237 MQAFNTMPGRISLAIGLWTTSQTLGYVSLAGQFIDSEWKMHRRMLNFMMVSSPHSENALS 288

[Close]

BLAST of Lcy01g007390 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.8e-15
Identity = 70/243 (28.81%), Postives = 104/243 (42.80%), Query Frame = 0


Query: 33  SSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGS--LKHH-- 92
           S+P   R+  K S+VW+HF  I+        A  K C   +A  S   + G+  LK H  
Sbjct: 57  STPPTSRRRRKKSLVWEHF-TIEAVSGGATRACCKLCKQTFAYSSGSKIAGTSHLKRHIT 116

Query: 93  LENCKKYPYQRTKDPRQKQLVFKPKEAIDNS--------------ESKLSCETFNLKNCR 152
           L +C     Q  K      L   P    DN                +  +   F+     
Sbjct: 117 LGSCPIIKNQEHK------LALTPAVGTDNDGEGTVERPSKRRYRYTGYANAAFDQDRSC 176

Query: 153 RALAEMIILDELPFRFVENIGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRL 212
             LA+MIIL + P   V+   F  FI+       P F +    T+  +V  +Y  EK+ L
Sbjct: 177 SYLAKMIILHDYPLHIVQQPAFTTFIDS----LQPRFRVVDVETMEGEVYAVYQKEKENL 236

Query: 213 KDMFKAKRYRVSLTTDCWTSGQNINYMVLTTHFIDSEWNLHKRILSFSTIEN-HRGDAIG 257
              F     R+SLT   WT+ Q + Y+ L   FIDSEW +H+R+L+F  + + H  +A+ 
Sbjct: 237 MQAFSTMPGRISLTIGLWTTSQTLGYVSLAGQFIDSEWKIHRRMLNFMMVSSPHSENALS 288

[Close]

BLAST of Lcy01g007390 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 68/233 (29.18%), Postives = 104/233 (44.64%), Query Frame = 0


Query: 37  KKRKNTKISVVWDHFEKIK---DCDPND-----PYAKGKYCGAKYACHSKRNVTGSLKHH 96
           +KR     S VW HF K +   + D         +     C AKY        +G  ++H
Sbjct: 133 QKRAKKCTSDVWQHFTKKEIEVEVDGKKYVQVWGHCNFPNCKAKYRAEGHHGTSG-FRNH 192

Query: 97  LENCKKYPYQRTKDPRQK-QLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELP 156
           L         RT     K QL  K ++      + +    ++     + L   II+ E P
Sbjct: 193 L---------RTSHSLVKGQLCLKSEKDHGKDINLIEPYKYDEVVSLKKLHLAIIMHEYP 252

Query: 157 FRFVENIGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSL 216
           F  VE+  F  F+        P+F + SR+T  + ++ +Y+ EK++L    K  + R S 
Sbjct: 253 FNIVEHEYFVEFVKS----LRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFST 312

Query: 217 TTDCWTSGQNINYMVLTTHFIDSEWNLHKRILSFSTIE-NHRGDAIGKTIERI 260
           T D WTS QN +YM +T H+ID +W L KRI+ F  +E  H G  + +T   I
Sbjct: 313 TMDMWTSCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQTFTAI 351

[Close]

BLAST of Lcy01g007390 vs. ExPASy TrEMBL
Match: A0A5D3CR68 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001050 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.9e-83
Identity = 151/225 (67.11%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSKRN TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L  CR AL EMII+DELPF+FVE 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDVLK+YV+EK RL+DMF   +YRVSLTTDCWT
Sbjct: 166 KGFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLT HFIDS+W LHKRILSFS IENH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTAHFIDSDWKLHKRILSFSPIENHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. ExPASy TrEMBL
Match: A0A5A7SVU3 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00760 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.9e-83
Identity = 151/225 (67.11%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSKRN TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L  CR AL EMII+DELPF+FVE 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDVLK+YV+EK RL+DMF   +YRVSLTTDCWT
Sbjct: 166 KGFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLT HFIDS+W LHKRILSFS IENH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTAHFIDSDWKLHKRILSFSPIENHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. ExPASy TrEMBL
Match: A0A5A7URG0 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00400 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 9.5e-83
Identity = 148/225 (65.78%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSK N TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKHNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L+ CR AL EMII+DELPF+FV+ 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLEGCREALVEMIIVDELPFKFVDG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDVLK+YV+EK RL+DMF   +YRVSLTTDCWT
Sbjct: 166 KGFKKFVDKLTCENHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLTTHFIDS+W LHKRIL+F  IENH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTTHFIDSDWKLHKRILNFCPIENHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. ExPASy TrEMBL
Match: A0A5A7THT5 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G001530 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 3.6e-82
Identity = 149/225 (66.22%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSKRN TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L  CR AL EMII+DELPF+FVE 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDV K+YV+EK RL+DMF   +YRVSLTTDCWT
Sbjct: 166 KGFKKFVDKLTCGNHTRFVVPSRFTVARDVPKLYVNEKNRLRDMFVKNKYRVSLTTDCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLT HFIDS+W LHKRILSFS I+NH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTAHFIDSDWKLHKRILSFSPIKNHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. ExPASy TrEMBL
Match: A0A5D3CEC4 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001000 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 4.7e-82
Identity = 149/225 (66.22%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSKRN TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L  CR AL EMII+DELPF+FVE 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDVLK+YV+EK RL+DMF   +YRVSLTT+CWT
Sbjct: 166 KGFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTNCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLT HF DS+W LHKRILSFS IENH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTAHFNDSDWKLHKRILSFSPIENHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. NCBI nr
Match: KAA0033275.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 4.0e-83
Identity = 151/225 (67.11%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSKRN TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L  CR AL EMII+DELPF+FVE 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDVLK+YV+EK RL+DMF   +YRVSLTTDCWT
Sbjct: 166 KGFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLT HFIDS+W LHKRILSFS IENH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTAHFIDSDWKLHKRILSFSPIENHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. NCBI nr
Match: TYK14363.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 4.0e-83
Identity = 151/225 (67.11%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSKRN TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L  CR AL EMII+DELPF+FVE 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDVLK+YV+EK RL+DMF   +YRVSLTTDCWT
Sbjct: 166 KGFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLT HFIDS+W LHKRILSFS IENH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTAHFIDSDWKLHKRILSFSPIENHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. NCBI nr
Match: KAA0057700.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa] >TYK27486.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 316.6 bits (810), Expect = 2.0e-82
Identity = 148/225 (65.78%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSK N TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKHNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L+ CR AL EMII+DELPF+FV+ 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLEGCREALVEMIIVDELPFKFVDG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDVLK+YV+EK RL+DMF   +YRVSLTTDCWT
Sbjct: 166 KGFKKFVDKLTCENHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTDCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLTTHFIDS+W LHKRIL+F  IENH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTTHFIDSDWKLHKRILNFCPIENHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. NCBI nr
Match: KAA0040955.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 314.7 bits (805), Expect = 7.5e-82
Identity = 149/225 (66.22%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSKRN TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L  CR AL EMII+DELPF+FVE 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDV K+YV+EK RL+DMF   +YRVSLTTDCWT
Sbjct: 166 KGFKKFVDKLTCGNHTRFVVPSRFTVARDVPKLYVNEKNRLRDMFVKNKYRVSLTTDCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLT HFIDS+W LHKRILSFS I+NH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTAHFIDSDWKLHKRILSFSPIKNHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. NCBI nr
Match: TYK09690.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 314.3 bits (804), Expect = 9.7e-82
Identity = 149/225 (66.22%), Postives = 180/225 (80.00%), Query Frame = 0


Query: 34  SPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENCK 93
           +P K RKN K S+VWDHFE++K  DPNDP AK KYCG  YACHSKRN TG++KHHLENCK
Sbjct: 46  NPPKIRKNVKQSMVWDHFERLKG-DPNDPRAKCKYCGVVYACHSKRNGTGTMKHHLENCK 105

Query: 94  KYPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFVEN 153
           KYPYQ+ +D  Q  L FKPK+ + ++ S+L CE+F+L  CR AL EMII+DELPF+FVE 
Sbjct: 106 KYPYQKKRDQTQMTLAFKPKDKVGDNSSQLVCESFSLDGCRDALVEMIIVDELPFKFVEG 165

Query: 154 IGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDCWT 213
            GF++F++K        FV+PSR T+ARDVLK+YV+EK RL+DMF   +YRVSLTT+CWT
Sbjct: 166 KGFKKFVDKLTCGNHTRFVVPSRFTVARDVLKLYVNEKNRLRDMFVKNKYRVSLTTNCWT 225

Query: 214 SGQNINYMVLTTHFIDSEWNLHKRILSFSTIENHRGDAIGKTIER 259
           SGQNINYMVLT HF DS+W LHKRILSFS IENH+GD IGKTIE+
Sbjct: 226 SGQNINYMVLTAHFNDSDWKLHKRILSFSPIENHKGDTIGKTIEK 269

[Close]

BLAST of Lcy01g007390 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-16
Identity = 62/218 (28.44%), Postives = 101/218 (46.33%), Query Frame = 0


Query: 33  SSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGS--LKHHLE 92
           + P K+RK  K S+VW+HF  I+  +PN   A  K C   +A  +   V G+  LK H+ 
Sbjct: 58  TQPIKRRK--KKSMVWEHF-TIEAVEPNCRRAFCKGCNQSFAYSNGNKVAGTSHLKRHIF 117

Query: 93  NCKKYPYQRTKDPRQKQLVF--------KPKEAIDNSESKLSCETFNLKNCRRALAEMII 152
                    T D     L+          P+    +  +      FN   CR+ +A+MII
Sbjct: 118 KGTCPALIHTHDNDNNPLMSTPYTPKTDTPRRRYRSQNNASPYVAFNQDKCRQEIAKMII 177

Query: 153 LDELPFRFVENIGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKR 212
           + + P   V++ GF  F+        P+F   S   +  D +  Y++EK+ +    +   
Sbjct: 178 MHDYPLHMVQHPGFVSFVQS----IQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGIP 237

Query: 213 YRVSLTTDCWTSGQNINYMVLTTHFIDSEWNLHKRILS 241
            R  LT D WTS   + Y+ +T H+IDS+W + K++L+
Sbjct: 238 GRFCLTLDFWTSKLTLGYVFITAHYIDSDWKIQKKLLN 268

[Close]

BLAST of Lcy01g007390 vs. TAIR 10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 51.6 bits (122), Expect = 1.1e-06
Identity = 51/213 (23.94%), Postives = 85/213 (39.91%), Query Frame = 0


Query: 33  SSPTKKRKNTKISVVWDHFEKIKDCDPNDPYAKGKYCGAKYACHSKRNVTGSLKHHLENC 92
           +S   KRK T  SV   +FE      P+    K K+CG  Y   S    TG+L  HL N 
Sbjct: 43  NSVPPKRKKTMTSVYLKYFETA----PDSKTRKCKFCGQSY---SIATATGNLGRHLTNR 102

Query: 93  KK-YPYQRTKDPRQKQLVFKPKEAIDNSESKLSCETFNLKNCRRALAEMIILDELPFRFV 152
              Y            +   P   +  S+S+      +  +    + + + L  LP   V
Sbjct: 103 HPGYDKAAADVVTSSSVPQTPPAVVKPSQSQSKVPQLDYDHLNWLVLKWLALSSLPPSTV 162

Query: 153 ENIGFRRFINKSIVLFAPNFVLPSRITIARDVLKIYVSEKKRLKDMFKAKRYRVSLTTDC 212
           +      ++  S     P+  L         + +++ S +  +K   +  + +VS+T   
Sbjct: 163 D----ETWLGNSFKFLKPSIQLWPAEKYKAILDEVFTSMRGDVKTTLEHIQSKVSVTLSF 222

Query: 213 WTSGQNINYMVLTTHFIDSEWNLHKRILSFSTI 245
           W S +NI YM +T  +ID  W+ H+ +L    I
Sbjct: 223 WNSYENIFYMSVTGQWIDENWSSHRLLLDICRI 244

The following BLAST results are available for this feature:

BLAST of Lcy01g007390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q75HY5	2.5e-16	28.05	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
Q9M2N5	1.6e-15	28.44	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]
B9FJG3	1.6e-15	28.81	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]
Q6AVI0	2.8e-15	28.81	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
P08770	1.1e-14	29.18	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]

BLAST of Lcy01g007390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CR68	1.9e-83	67.11	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5A7SVU3	1.9e-83	67.11	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5A7URG0	9.5e-83	65.78	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5A7THT5	3.6e-82	66.22	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]
A0A5D3CEC4	4.7e-82	66.22	Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var...	[more]

BLAST of Lcy01g007390 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033275.1	4.0e-83	67.11	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
TYK14363.1	4.0e-83	67.11	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
KAA0057700.1	2.0e-82	65.78	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
KAA0040955.1	7.5e-82	66.22	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]
TYK09690.1	9.7e-82	66.22	zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ...	[more]

BLAST of Lcy01g007390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.2e-16	28.44	BED zinc finger ;hAT family dimerisation domain	[more]
AT1G18560.1	1.1e-06	23.94	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00614	bed5	coord: 42..95 e-value: 1.2E-9 score: 48.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 33..256
None	No IPR available	PANTHER	PTHR23272:SF130	OS01G0698300 PROTEIN	coord: 33..256
None	No IPR available	SUPERFAMILY	140996	Hermes dimerisation domain	coord: 131..193
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 192..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g007390.1	Lcy01g007390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009791	post-embryonic development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046983	protein dimerization activity