Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGGTTTCGTCTCTCAGCGTCGCCATGTTCACCATCCACGTTGAGACAGTGTACGACCTGAGGCTCGCGCTGTTGCCACTGGCTAGCATCTGCAGTAATGCCGATATCAAATGCACAAACGAAAGGTTGTCGATAATCGTCGTCCCTTCTGCTCATCCCTTCGTTGTATCGCTTCGAATGTTGCCTACATTCTTCACTTCCTTTCAGTTCGACTCCGAAGGCAACGACTTCGAGGAGTATCGTTCCAGGTTTTTCCTTAAGCTCTTCATGACTAATATTTGCAATATGTTCTGCGATGGTCTTTCCCTGACCATTACTCTCCGCAAAGACCACGTTCTTGCGCCTCTCAAGTTTGAGGACTCTCGTAAGTTTATCTCTCTCTATGTTTTTCTTTTCATTTCTGAAGAATTGTGGTCTAATTGAATTGAATGTTGAGGATGATTTCTCTCTGGTTTGAAATTTTGATTTGAAGATACTCGGTATTTTCAAGGATTTTCTTTAATCTCCAGAATCGTTGTTGTGTGCGGTGATTTCTTTTTCGAAGAATCGTGATTCTAATTGAATTGCATTTCGTCGTTGTGGTGACCTTTTGGTTAGGATGATTTCCTCTGGTCCGTAATTTTGATTGAATCTTCAAATTCTAATAACATTTGTTATTTACTCGGATTCTTTTATCTCAAGAATTATTGTTGTGTGCGGTGATTTCTTTCCCGAAGAATTTTGATTCTAATTGAATTGAATGTCATCGTTGCGGTGATCTCTGGAATTGAGGATGATTTTTCTCTGATCCGTAATTTTGATTGAATCTTGGATTTTATGATATTCGGTGTTTTCTCAGCTTTTTTTTTTTTTAAATCTATAAAGTAGTTGTTGTTGCGGTGATGTCTTTTTCGAAGAATCTTGATTCTAATTGAACTGAATGTTGTCTTTCTGGTGATTTCTGGTCGAGGACGTTTCTGTAATTTTAATTGAATCTTGGATTTTATAATTTTCGGTAATTTCTTGGCTTTTCGATCTCAAGAATCGTCATGTTTCCGGTTTCAAGAACTGGATTAAATGAACTAGATCGAATTTCATATCTGATATGAAGAGAAAGAACAGAGCCTTGAATTATTTTTCAGGTGTCCGAAAATTGAAATAGAATAGCTAGACCTTTTTGTCTTCATCACATATCAATCATTTTCTCTCTGGTCTTTAATTTTGTACTACGTTTCTATCATCACTTCAATTTTTAAATTGTTAATATTGATTTCAGTAACTGGATACTTGCAATACTCTGCATTGATATTGTCACATCCCCTAAGTATTGATATCAGCCCAATTGATTTCGGAGTTTTTGTTGCAATTCGTTCCGCTGAATTCAAATCCCTTGTTTCTGACTTAGTTGTCTGCACCAATGAGTTAGGTAACTCGACTTCTTCCTTTTGCAGTTTATATAAAAGAAAAGTCTTGAGTTTCTGAAATCTGTTTTCTACTTCTGCAACAGTTTGTGTTACTGTAACAGATAAGGAGGCCACGTTCACTGCTCTAACTAGGGAAGTTGTTCTCACCACAGAGGTAATGACTAATGATGGCTTCCAAACCTTTAAGTTGGTGTTAAAATTTCATACTTATGTTTTGATTCGTGTGTTTGTTGATTCTGATTACAATTTTACTAATCTCCATGTAAACTCTCCAAACATGAGTTTTAGTTTTACAAATATGAATTAGAATGACACAAGCTCAAATTTCAAACTTAGAATATACTTTTGGTTTTTGGTTTTTGAAAATTAAGCTTATAAAACTACTTCCCCTATTTGTTTCTTTGTTTTGTTATACTTCCTTCACCTGTGTTTCAAAATCCAAGTCAGAATTTGAAAACTAATTAAAAAAAAAAAAGTAGTTTTCAAAGACTTGAATTTGGCTAAGAATTCAAATATGTCCTTTACAAAGATGAAAACCATGGTAAGAAAATTGTGAGAAAACAAACATAGTTTTCAAAAACAAAAAACAAAATGATTATCAAACAGAACCATAATAACTCCAACTTATTAAAATTGTAAATCAAATATCCCATACAACTAACACATCCCAATTGGGCTGATGTGGTGCAGAATAGACAATGCATAATTGGGGGTGTTAGAGCAGGAAGTGTATTATACTTCCTGATCACTCTCCATCCCATGTACTTCTTCTATCATCTGGCGTATACAAGCAAGTTCGTGTGGCTCTTTAAGACAGTTAGTTCCCGTAATTTGTTGAGTTGCTGTACGAAGATAGATGCTAGCTATCTGGTCTGCTTTTGACATTGGAAGAGCTGTTTTGAAGCTAATGTGAGTTTCTCAAATTAGACTCTGTTGATGAATCTTATCTGTTGCATTCTTTTTCTCACAAAAGAGTGCCTGTGAAATATGCATATAATAATGCATTTTGAGTACTAT
mRNA sequence
TGGTTTCGTCTCTCAGCGTCGCCATGTTCACCATCCACGTTGAGACAGTGTACGACCTGAGGCTCGCGCTGTTGCCACTGGCTAGCATCTGCAGTAATGCCGATATCAAATGCACAAACGAAAGGTTGTCGATAATCGTCGTCCCTTCTGCTCATCCCTTCGTTGTATCGCTTCGAATGTTGCCTACATTCTTCACTTCCTTTCAGTTCGACTCCGAAGGCAACGACTTCGAGGAGTATCGTTCCAGGTTTTTCCTTAAGCTCTTCATGACTAATATTTGCAATATGTTCTGCGATGGTCTTTCCCTGACCATTACTCTCCGCAAAGACCACGTTCTTGCGCCTCTCAAGTTTGAGGACTCTCTAACTGGATACTTGCAATACTCTGCATTGATATTGTCACATCCCCTAAGTATTGATATCAGCCCAATTGATTTCGGAGTTTTTGTTGCAATTCGTTCCGCTGAATTCAAATCCCTTGTTTCTGACTTAGTTGTCTGCACCAATGAGTTAGTTTGTGTTACTGTAACAGATAAGGAGGCCACGTTCACTGCTCTAACTAGGGAAGTTGTTCTCACCACAGAGAATAGACAATGCATAATTGGGGGTGTTAGAGCAGGAAGTGTATTATACTTCCTGATCACTCTCCATCCCATGTACTTCTTCTATCATCTGGCGTATACAAGCAAGTTCGTGTGGCTCTTTAAGACAGTTAGTTCCCGTAATTTGTTGAGTTGCTGTACGAAGATAGATGCTAGCTATCTGGTCTGCTTTTGACATTGGAAGAGCTGTTTTGAAGCTAATGTGAGTTTCTCAAATTAGACTCTGTTGATGAATCTTATCTGTTGCATTCTTTTTCTCACAAAAGAGTGCCTGTGAAATATGCATATAATAATGCATTTTGAGTACTAT
Coding sequence (CDS)
ATGTTCACCATCCACGTTGAGACAGTGTACGACCTGAGGCTCGCGCTGTTGCCACTGGCTAGCATCTGCAGTAATGCCGATATCAAATGCACAAACGAAAGGTTGTCGATAATCGTCGTCCCTTCTGCTCATCCCTTCGTTGTATCGCTTCGAATGTTGCCTACATTCTTCACTTCCTTTCAGTTCGACTCCGAAGGCAACGACTTCGAGGAGTATCGTTCCAGGTTTTTCCTTAAGCTCTTCATGACTAATATTTGCAATATGTTCTGCGATGGTCTTTCCCTGACCATTACTCTCCGCAAAGACCACGTTCTTGCGCCTCTCAAGTTTGAGGACTCTCTAACTGGATACTTGCAATACTCTGCATTGATATTGTCACATCCCCTAAGTATTGATATCAGCCCAATTGATTTCGGAGTTTTTGTTGCAATTCGTTCCGCTGAATTCAAATCCCTTGTTTCTGACTTAGTTGTCTGCACCAATGAGTTAGTTTGTGTTACTGTAACAGATAAGGAGGCCACGTTCACTGCTCTAACTAGGGAAGTTGTTCTCACCACAGAGAATAGACAATGCATAATTGGGGGTGTTAGAGCAGGAAGTGTATTATACTTCCTGATCACTCTCCATCCCATGTACTTCTTCTATCATCTGGCGTATACAAGCAAGTTCGTGTGGCTCTTTAAGACAGTTAGTTCCCGTAATTTGTTGAGTTGCTGTACGAAGATAGATGCTAGCTATCTGGTCTGCTTTTGA
Protein sequence
MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSFQFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQYSALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTREVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCTKIDASYLVCF
Homology
BLAST of Lcy01g006360 vs. ExPASy TrEMBL
Match:
A0A6J1L5J0 (uncharacterized protein LOC111499310 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499310 PE=4 SV=1)
HSP 1 Score: 344.0 bits (881), Expect = 5.4e-91
Identity = 170/250 (68.00%), Postives = 208/250 (83.20%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MFTIHV+TVYDLRLA+LPLA++C ADIKC+ E+LSIIVV S +PFV SLRMLPTFFT+F
Sbjct: 1 MFTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
Q +G++FEE+R +F L+LF TNI NM+ + LS+TI + + LAPLKFED TGYLQY
Sbjct: 61 QLHPDGDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
SAL+LSH +IDISPIDFGVFVAIRS EF ++VSDLV+ +ELV +T+T+ E F ALT
Sbjct: 121 SALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALTG 180
Query: 181 EVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCT 240
EV TTEN+ CIIGGV+ G V YF+ITLHP+YFF+H++YTSKFVW+FKTVSSRNLLSCCT
Sbjct: 181 EVTFTTENKDCIIGGVKGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSSRNLLSCCT 240
Query: 241 KIDASYLVCF 251
+ ASYLVC+
Sbjct: 241 GLHASYLVCY 250
BLAST of Lcy01g006360 vs. ExPASy TrEMBL
Match:
A0A6J1H3U3 (uncharacterized protein LOC111460173 OS=Cucurbita moschata OX=3662 GN=LOC111460173 PE=4 SV=1)
HSP 1 Score: 343.6 bits (880), Expect = 7.0e-91
Identity = 169/250 (67.60%), Postives = 209/250 (83.60%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MFTIHV+TVYDLRLA+LPLA++C ADIKC+ E+LSIIVV S +PFV SLRMLPTFFTSF
Sbjct: 1 MFTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTSF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
Q ++G++FEE+R +F L+LF TNI NM+ + LS+TI + + LAPLKFED TGYLQY
Sbjct: 61 QLHADGDNFEEHRFKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
SAL+LSH +IDISPID+GVFVAIRS EF ++VSDLV+ +ELV +T+T+ E F ALT
Sbjct: 121 SALVLSHAQNIDISPIDYGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFDALTG 180
Query: 181 EVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCT 240
+V TTEN+ CIIGGV+ G V YF+ITLHP+YFF+H++YTSKFVW+FKTVSSRNLLSCCT
Sbjct: 181 QVTFTTENKDCIIGGVKEGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSSRNLLSCCT 240
Query: 241 KIDASYLVCF 251
+ ASYLVC+
Sbjct: 241 GLHASYLVCY 250
BLAST of Lcy01g006360 vs. ExPASy TrEMBL
Match:
A0A6J1DPD2 (uncharacterized protein LOC111023073 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111023073 PE=4 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 1.4e-67
Identity = 137/250 (54.80%), Postives = 185/250 (74.00%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MF +HV+TV DLR ALLPL + AD+KC++++LSI VVP PFVVSL + P+FFTSF
Sbjct: 1 MFAVHVDTVMDLRTALLPLVHMSRKADLKCSSDKLSITVVPDQFPFVVSLHLAPSFFTSF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
QF EG++FEEY SRFFL LF++N+ N+ D +++T+ LR +APLKF TGYLQY
Sbjct: 61 QFLPEGDEFEEYSSRFFLDLFISNLSNVPDDSITMTMFLRAHPGIAPLKFVIPSTGYLQY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
SAL+LS PL+I I ID+ VFVAI S EF +++ L+V TNE V + +T + +A +
Sbjct: 121 SALVLSPPLNIGIDQIDYRVFVAIHSYEFVLILTRLLVLTNETVRIKLTKSKVKISAQSG 180
Query: 181 EVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCT 240
EVVL +N+QC+IGGV G+ + F ITL P +FF+HL Y S++VWLFKTVSSR++LS CT
Sbjct: 181 EVVLKPKNKQCVIGGVTPGATIQFEITLDPTFFFFHLTYLSRWVWLFKTVSSRSVLSFCT 240
Query: 241 KIDASYLVCF 251
++++ YLVCF
Sbjct: 241 ELESCYLVCF 250
BLAST of Lcy01g006360 vs. ExPASy TrEMBL
Match:
A0A6J1L2R6 (uncharacterized protein LOC111499310 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499310 PE=4 SV=1)
HSP 1 Score: 239.2 bits (609), Expect = 1.9e-59
Identity = 123/187 (65.78%), Postives = 151/187 (80.75%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MFTIHV+TVYDLRLA+LPLA++C ADIKC+ E+LSIIVV S +PFV SLRMLPTFFT+F
Sbjct: 1 MFTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
Q +G++FEE+R +F L+LF TNI NM+ + LS+TI + + LAPLKFED TGYLQY
Sbjct: 61 QLHPDGDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
SAL+LSH +IDISPIDFGVFVAIRS EF ++VSDLV+ +ELV +T+T+ E F ALT
Sbjct: 121 SALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALTG 180
Query: 181 EVVLTTE 188
EV TTE
Sbjct: 181 EVTFTTE 187
BLAST of Lcy01g006360 vs. ExPASy TrEMBL
Match:
A0A6J1DR53 (uncharacterized protein LOC111023073 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111023073 PE=4 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 6.2e-55
Identity = 121/250 (48.40%), Postives = 164/250 (65.60%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MF +HV+TV DLR ALLPL + AD+KC++++LSI VVP PFVVSL + P+FFTSF
Sbjct: 1 MFAVHVDTVMDLRTALLPLVHMSRKADLKCSSDKLSITVVPDQFPFVVSLHLAPSFFTSF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
QF EG++FEEY SRFFL LF++N+ N+ D +++T+ LR +APLKF TGYLQY
Sbjct: 61 QFLPEGDEFEEYSSRFFLDLFISNLSNVPDDSITMTMFLRAHPGIAPLKFVIPSTGYLQY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
SAL+LS PL+I V + +T + +A +
Sbjct: 121 SALVLSPPLNI--------------------------------VRIKLTKSKVKISAQSG 180
Query: 181 EVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCT 240
EVVL +N+QC+IGGV G+ + F ITL P +FF+HL Y S++VWLFKTVSSR++LS CT
Sbjct: 181 EVVLKPKNKQCVIGGVTPGATIQFEITLDPTFFFFHLTYLSRWVWLFKTVSSRSVLSFCT 218
Query: 241 KIDASYLVCF 251
++++ YLVCF
Sbjct: 241 ELESCYLVCF 218
BLAST of Lcy01g006360 vs. NCBI nr
Match:
XP_023006648.1 (uncharacterized protein LOC111499310 isoform X1 [Cucurbita maxima])
HSP 1 Score: 344.0 bits (881), Expect = 1.1e-90
Identity = 170/250 (68.00%), Postives = 208/250 (83.20%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MFTIHV+TVYDLRLA+LPLA++C ADIKC+ E+LSIIVV S +PFV SLRMLPTFFT+F
Sbjct: 1 MFTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTTF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
Q +G++FEE+R +F L+LF TNI NM+ + LS+TI + + LAPLKFED TGYLQY
Sbjct: 61 QLHPDGDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
SAL+LSH +IDISPIDFGVFVAIRS EF ++VSDLV+ +ELV +T+T+ E F ALT
Sbjct: 121 SALVLSHAQNIDISPIDFGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFGALTG 180
Query: 181 EVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCT 240
EV TTEN+ CIIGGV+ G V YF+ITLHP+YFF+H++YTSKFVW+FKTVSSRNLLSCCT
Sbjct: 181 EVTFTTENKDCIIGGVKGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSSRNLLSCCT 240
Query: 241 KIDASYLVCF 251
+ ASYLVC+
Sbjct: 241 GLHASYLVCY 250
BLAST of Lcy01g006360 vs. NCBI nr
Match:
XP_022959071.1 (uncharacterized protein LOC111460173 [Cucurbita moschata])
HSP 1 Score: 343.6 bits (880), Expect = 1.4e-90
Identity = 169/250 (67.60%), Postives = 209/250 (83.60%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MFTIHV+TVYDLRLA+LPLA++C ADIKC+ E+LSIIVV S +PFV SLRMLPTFFTSF
Sbjct: 1 MFTIHVDTVYDLRLAVLPLATLCDEADIKCSREKLSIIVVSSPYPFVASLRMLPTFFTSF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
Q ++G++FEE+R +F L+LF TNI NM+ + LS+TI + + LAPLKFED TGYLQY
Sbjct: 61 QLHADGDNFEEHRFKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
SAL+LSH +IDISPID+GVFVAIRS EF ++VSDLV+ +ELV +T+T+ E F ALT
Sbjct: 121 SALVLSHAQNIDISPIDYGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFDALTG 180
Query: 181 EVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCT 240
+V TTEN+ CIIGGV+ G V YF+ITLHP+YFF+H++YTSKFVW+FKTVSSRNLLSCCT
Sbjct: 181 QVTFTTENKDCIIGGVKEGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSSRNLLSCCT 240
Query: 241 KIDASYLVCF 251
+ ASYLVC+
Sbjct: 241 GLHASYLVCY 250
BLAST of Lcy01g006360 vs. NCBI nr
Match:
XP_023549022.1 (uncharacterized protein LOC111807509 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 337.8 bits (865), Expect = 7.9e-89
Identity = 167/250 (66.80%), Postives = 206/250 (82.40%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MFTIHV+TVYDLRLA+LPLA++C A IKC+ E+LSIIVV S +PFV SLRMLPTFFTSF
Sbjct: 1 MFTIHVDTVYDLRLAVLPLATLCDEAHIKCSREKLSIIVVSSPYPFVASLRMLPTFFTSF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
+G++FEE+R +F L+LF TNI NM+ + LS+TI + + LAPLKFED TGYLQY
Sbjct: 61 LLHPDGDNFEEHRYKFLLQLFATNISNMYSEDLSMTIYIGGNQRLAPLKFEDPHTGYLQY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
SAL+LSH +IDISPID+GVFVAIRS EF ++VSDLV+ +ELV +T+T+ E F ALT
Sbjct: 121 SALVLSHAQNIDISPIDYGVFVAIRSTEFINIVSDLVILPDELVSITLTETEVKFDALTG 180
Query: 181 EVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCT 240
+V TTEN+ CIIGGV+ G V YF+ITLHP+YFF+H++YTSKFVW+FKTVSSRNLLSCCT
Sbjct: 181 QVTFTTENKDCIIGGVKGGKVFYFIITLHPVYFFFHISYTSKFVWIFKTVSSRNLLSCCT 240
Query: 241 KIDASYLVCF 251
+ ASYLVC+
Sbjct: 241 GLHASYLVCY 250
BLAST of Lcy01g006360 vs. NCBI nr
Match:
XP_038875564.1 (uncharacterized protein LOC120067978 isoform X1 [Benincasa hispida])
HSP 1 Score: 279.6 bits (714), Expect = 2.6e-71
Identity = 142/250 (56.80%), Postives = 184/250 (73.60%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MFTI V+ V DLRLALLP+A++C ADIKCTN LSIIV+P+ + FV +LR+LP+FFTSF
Sbjct: 1 MFTIRVDRVNDLRLALLPMATLCDAADIKCTNRNLSIIVLPTRYSFVAALRLLPSFFTSF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
QF G +F YR+ F+LKLF TNI NM+ D LS+T+ L + + LAP+KFED +GYLQY
Sbjct: 61 QFHPVG-EFNAYRANFYLKLFTTNISNMYSDDLSVTLLLNRHNALAPVKFEDPHSGYLQY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
SAL+L+ P ++DI+PID VF AIRSAEF + +SDLVV E VCV VT A F + R
Sbjct: 121 SALLLARPHNVDINPIDLRVFFAIRSAEFINTLSDLVVLPTEYVCVVVTKTGALFKSARR 180
Query: 181 EVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCT 240
E+V +TE +CI+GG+ G + F+++ PMYFFYH+AYT+ VW F T +SR LLSCC
Sbjct: 181 EIVFSTEKNECIMGGIGEGDKVLFVMSPSPMYFFYHIAYTTNLVWFFNTSNSRTLLSCCV 240
Query: 241 KIDASYLVCF 251
+ ASY+V F
Sbjct: 241 GLHASYMVSF 249
BLAST of Lcy01g006360 vs. NCBI nr
Match:
XP_038875753.1 (uncharacterized protein LOC120068128 [Benincasa hispida])
HSP 1 Score: 273.9 bits (699), Expect = 1.4e-69
Identity = 140/250 (56.00%), Postives = 181/250 (72.40%), Query Frame = 0
Query: 1 MFTIHVETVYDLRLALLPLASICSNADIKCTNERLSIIVVPSAHPFVVSLRMLPTFFTSF 60
MFTI V TVYDLRLALLP+A++C ADIKCTN+RLSIIV PS PFVV+LRMLP FFTSF
Sbjct: 1 MFTIDVGTVYDLRLALLPIATLCETADIKCTNQRLSIIVFPSRLPFVVALRMLPEFFTSF 60
Query: 61 QFDSEGNDFEEYRSRFFLKLFMTNICNMFCDGLSLTITLRKDHVLAPLKFEDSLTGYLQY 120
Q+ + +++ YR+ FL LF+TN+ + D +++TI L + H LAP+KF+D +GY +Y
Sbjct: 61 QYHPDPDNYNTYRANIFLHLFITNVSKTYTDDINVTIYLNRRHPLAPIKFQDPRSGYFRY 120
Query: 121 SALILSHPLSIDISPIDFGVFVAIRSAEFKSLVSDLVVCTNELVCVTVTDKEATFTALTR 180
S L+L++P +IDIS IDF VFVAI SA F +++ D + E VCV VT EA F +
Sbjct: 121 STLVLANPHNIDISSIDFSVFVAIPSAAFINIIYDFDLPPTEYVCVAVTKTEAKFKSQKH 180
Query: 181 EVVLTTENRQCIIGGVRAGSVLYFLITLHPMYFFYHLAYTSKFVWLFKTVSSRNLLSCCT 240
EV T EN+ CIIGGV +V YF+ITL P FY++AY + FVWLF+TVS+R+LL C
Sbjct: 181 EVTFTPENKDCIIGGVGEEAVYYFMITLAPTCLFYNIAYKTNFVWLFRTVSTRSLLCSCV 240
Query: 241 KIDASYLVCF 251
+ ASYLVCF
Sbjct: 241 GLHASYLVCF 250
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1L5J0 | 5.4e-91 | 68.00 | uncharacterized protein LOC111499310 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1H3U3 | 7.0e-91 | 67.60 | uncharacterized protein LOC111460173 OS=Cucurbita moschata OX=3662 GN=LOC1114601... | [more] |
A0A6J1DPD2 | 1.4e-67 | 54.80 | uncharacterized protein LOC111023073 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1L2R6 | 1.9e-59 | 65.78 | uncharacterized protein LOC111499310 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... | [more] |
A0A6J1DR53 | 6.2e-55 | 48.40 | uncharacterized protein LOC111023073 isoform X3 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |
XP_023006648.1 | 1.1e-90 | 68.00 | uncharacterized protein LOC111499310 isoform X1 [Cucurbita maxima] | [more] |
XP_022959071.1 | 1.4e-90 | 67.60 | uncharacterized protein LOC111460173 [Cucurbita moschata] | [more] |
XP_023549022.1 | 7.9e-89 | 66.80 | uncharacterized protein LOC111807509 isoform X1 [Cucurbita pepo subsp. pepo] | [more] |
XP_038875564.1 | 2.6e-71 | 56.80 | uncharacterized protein LOC120067978 isoform X1 [Benincasa hispida] | [more] |
XP_038875753.1 | 1.4e-69 | 56.00 | uncharacterized protein LOC120068128 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |