Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAACTGCGTTCAAGATGGAACGCAATAGTGATGTTCTTATGAAAACAATCAAGCTACTGACTCATCTTTCAAAGCAAGCCAACATGAACTGCTCGCCGGTAATGATTTCATTCATAGCCTCCCCCTCTTCCTCTCGCTTCACTGCCTCACTCCGACTTTCCTCTCAGTTCTTCACCTATATTTCCCTCGATCGCCATTACCATTGCACCATTTTCATCGACGCCTTCTACCAAATCCTGCGTAATTTTCTTTGCCCCGCTTCTCCTTCCATGACCCTCGCTTTCTCCGGCTTCAGGATCAATCACTCCATCCTTTTGTTCCGAAGATCAAGTATATTATACGTCTAATTATTTACTCTTCCTTCATTTTTCTTTTCCCCAAGAAACCATGATCTTGTTTTTCTTTTTCTTTCAAGAACACAGTTTAATATAATTGTTGCTGTTATTTTCTGGGATCTTTAACTTGTTGTAGGCCATCCGACATTTGTGGTTTCTGGATTGGTACTGTTACCCTATAGACGGACGGAGGTTGGCGAGATTGATTACAGATACTTTTTCTCAATTGATGTGGAACAGTTCAAGCATATTGTAACGGAGTTACATTATTTCTACCATGATCCAAGTAACTCGACTCTCTTCTTCTTGATTGCTTCAAAGAAAGTGTGGTGTCGTGTCGTGTTTTTAACAACGTTGTTATATGTCACAGTTATTGTTGTTACTATGACGGATTCACAAGTCAAGTTCTCGGTTGGAGCTATTCAAATTGTTCTTACTAAAGAGGTATGCGAATTCTATTTAGGTTCTTTTTTTCCTTTTCATTTTAGAGTGTGTTTGGAATGACTTTTGAAGGTAGACTTATTACTGAATAACGTTAGGTTTTCTACTACATCTTCTAAAAGAAAAGGCGAGATTTTAAACTCTAGTCTTAATTATTAATTTCGTAAACTTGAAATAAGTGGAAATTGATACCTAAATCATAAAATTGTGGTTTTTTTTTTGGATGCTGGCTCTTTTTAGTTGCATTTTGGTGTGTTTTTGTTGTTAGGATTGAGAATTTATAAGATTTGATTTAGAATGTTATATTTGACTTAGGGATTTCTTGTAATGTATTGGTCTTTTTTTTTTTTAAGTTCAACAACTTGTGAGTGACATTTTTTTGGTTGAGAATATATATATGTCTGAAACAGTTAAGCTATAAAAGAGTATGCGAGATTTTACTTTTATTCTTGTATATTTGATTTAGCAAGTCAACTCTAGTCTTAATTATTAATTTCATCCAATTCTATCGTAAACTTGAAATAAGGGGAAATTAATACCTAAATCAATTAAGTCCTTTTTAAATAAGATTGTGGTTTTTTTTTTTTTTTTTTTTTTGAGGCTGATTGTTTTTGTTGGGTTTGGCTCTTTTTTAGTTGGATTTTGTTGTGTTTTTGTTGTTAGGATTGAGAATTTATAAGATTTGATTTAGAATTAATGTTATATTTGACTTGGGATTTCTTGTAATTTATTGTTTTTTTTTTAAGTTCAACAACTTTGTGAGTAACATTTTTATTTTTTTTGTTGAGAATATATGTATGAAGCAGTTAAGCTATACTGATAAAAAAAATATTTTAAAATTTCTCGAAGTACTTTTGACTATGTAGCGTAGTCAATCATCATGGTAGGTACTAATAATGCTTCTGATTAGTTAAAAATATAAGTTATGTCAAAACGAAAATATTATTATTTAATTCATTTTCGGGAGTAAGGATTTGAACCTATAATTTATGAACATTCTATACAATGTGTTCTGAAATTGATGTGTATGAGCAAAGGTGTTTTTGTGTTTTATTTTCTGGGGTAAAATAAATGGAATTATTGGTTGCGCAGGAAAATCAATGCATAATTGGAAGAATTGGATTAGAAACTGAAGTAGAAACACAATTTCTTCTCATTCTCCATCCCAAGGAATTTTTCCTTGATTTGGCAATGGAGTCGGAACCAAAAAGGATATGGTTTTCCTTGATTCTTGTACAAGTTTACTATGCTCAATTTTTTAAATTCTATAATTCAAAGGCTAAGGATTGA
mRNA sequence
ATGATAACTGCGTTCAAGATGGAACGCAATAGTGATGTTCTTATGAAAACAATCAAGCTACTGACTCATCTTTCAAAGCAAGCCAACATGAACTGCTCGCCGGTAATGATTTCATTCATAGCCTCCCCCTCTTCCTCTCGCTTCACTGCCTCACTCCGACTTTCCTCTCAGTTCTTCACCTATATTTCCCTCGATCGCCATTACCATTGCACCATTTTCATCGACGCCTTCTACCAAATCCTGCGTAATTTTCTTTGCCCCGCTTCTCCTTCCATGACCCTCGCTTTCTCCGGCTTCAGGATCAATCACTCCATCCTTTTGTTCCGAAGATCAAGCCATCCGACATTTGTGGTTTCTGGATTGGTACTGTTACCCTATAGACGGACGGAGGTTGGCGAGATTGATTACAGATACTTTTTCTCAATTGATGTGGAACAGTTCAAGCATATTGTAACGGAGTTACATTATTTCTACCATGATCCAAGTAACTCGACTCTCTTCTTCTTGATTGCTTCAAAGAAAGTGTGGTGTCGTGTCGTGTTTTTAACAACGTTGTTATATGTCACAGTTATTGTTGTTACTATGACGGATTCACAAGTCAAGTTCTCGGTTGGAGCTATTCAAATTGTTCTTACTAAAGAGGAAAATCAATGCATAATTGGAAGAATTGGATTAGAAACTGAAGTAGAAACACAATTTCTTCTCATTCTCCATCCCAAGGAATTTTTCCTTGATTTGGCAATGGAGTCGGAACCAAAAAGGATATGGTTTTCCTTGATTCTTGTACAAGTTTACTATGCTCAATTTTTTAAATTCTATAATTCAAAGGCTAAGGATTGA
Coding sequence (CDS)
ATGATAACTGCGTTCAAGATGGAACGCAATAGTGATGTTCTTATGAAAACAATCAAGCTACTGACTCATCTTTCAAAGCAAGCCAACATGAACTGCTCGCCGGTAATGATTTCATTCATAGCCTCCCCCTCTTCCTCTCGCTTCACTGCCTCACTCCGACTTTCCTCTCAGTTCTTCACCTATATTTCCCTCGATCGCCATTACCATTGCACCATTTTCATCGACGCCTTCTACCAAATCCTGCGTAATTTTCTTTGCCCCGCTTCTCCTTCCATGACCCTCGCTTTCTCCGGCTTCAGGATCAATCACTCCATCCTTTTGTTCCGAAGATCAAGCCATCCGACATTTGTGGTTTCTGGATTGGTACTGTTACCCTATAGACGGACGGAGGTTGGCGAGATTGATTACAGATACTTTTTCTCAATTGATGTGGAACAGTTCAAGCATATTGTAACGGAGTTACATTATTTCTACCATGATCCAAGTAACTCGACTCTCTTCTTCTTGATTGCTTCAAAGAAAGTGTGGTGTCGTGTCGTGTTTTTAACAACGTTGTTATATGTCACAGTTATTGTTGTTACTATGACGGATTCACAAGTCAAGTTCTCGGTTGGAGCTATTCAAATTGTTCTTACTAAAGAGGAAAATCAATGCATAATTGGAAGAATTGGATTAGAAACTGAAGTAGAAACACAATTTCTTCTCATTCTCCATCCCAAGGAATTTTTCCTTGATTTGGCAATGGAGTCGGAACCAAAAAGGATATGGTTTTCCTTGATTCTTGTACAAGTTTACTATGCTCAATTTTTTAAATTCTATAATTCAAAGGCTAAGGATTGA
Protein sequence
MITAFKMERNSDVLMKTIKLLTHLSKQANMNCSPVMISFIASPSSSRFTASLRLSSQFFTYISLDRHYHCTIFIDAFYQILRNFLCPASPSMTLAFSGFRINHSILLFRRSSHPTFVVSGLVLLPYRRTEVGEIDYRYFFSIDVEQFKHIVTELHYFYHDPSNSTLFFLIASKKVWCRVVFLTTLLYVTVIVVTMTDSQVKFSVGAIQIVLTKEENQCIIGRIGLETEVETQFLLILHPKEFFLDLAMESEPKRIWFSLILVQVYYAQFFKFYNSKAKD
Homology
BLAST of Lcy01g006330 vs. ExPASy TrEMBL
Match:
A0A6J1DTW1 (uncharacterized protein LOC111023086 OS=Momordica charantia OX=3673 GN=LOC111023086 PE=4 SV=1)
HSP 1 Score: 185.7 bits (470), Expect = 2.7e-43
Identity = 116/254 (45.67%), Postives = 153/254 (60.24%), Query Frame = 0
Query: 10 NSDVLMKTIKLLTHLSKQANMNCSPVMISFIASPSSSRFTASLRLSSQFFTYISLDRHYH 69
N+ L+ + +L + +A++NC+P M+S I++P+S RFTA+LRL+ FF Y L+R++
Sbjct: 41 NTIPLINAMLVLVQFALKADLNCTPGMVSLISTPTSDRFTAALRLAPPFFIYYPLNRYFR 100
Query: 70 CTIFIDAFYQILRNFLCPASPSMTLAFSGFRINHSIL------LFRRSSHPTFVVSGLVL 129
CTI+ DAFY+IL N LC M L + RIN + L R + P + SGLV+
Sbjct: 101 CTIYADAFYRILFNMLCRGYSRMVLDYDE-RINEDRILLVFRSLMRDAEEP--LTSGLVV 160
Query: 130 LPYRRTEVGEIDYRYFFSIDVEQFKHIVTELHYFYHDPSNSTLFFLIASKKVWCRVVFLT 189
LP+ V EIDYRYFFSID E+F HIVTELH+FY
Sbjct: 161 LPHENQVVAEIDYRYFFSIDSEKFAHIVTELHFFY------------------------- 220
Query: 190 TLLYVTVIVVTMTDSQVKFSVGAIQIVLTKEENQCIIGRIGLETEVETQFLLILHPKEFF 249
I VTMTDSQVKF++GAI+IVLTKEEN+CIIGRIG E ET F + ++PK+FF
Sbjct: 221 -----DTIHVTMTDSQVKFALGAIEIVLTKEENECIIGRIG--EEEETHFEIYVNPKKFF 257
Query: 250 LDLAMESEPKRIWF 258
L S KR+WF
Sbjct: 281 YLLPARS--KRVWF 257
BLAST of Lcy01g006330 vs. ExPASy TrEMBL
Match:
A0A6J1KUR4 (uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889 PE=4 SV=1)
HSP 1 Score: 102.4 bits (254), Expect = 3.0e-18
Identity = 85/235 (36.17%), Postives = 120/235 (51.06%), Query Frame = 0
Query: 36 MISFIASPSSSRFTASLRLSSQFFTYISLDRHYHCTIFIDAFYQILRNFLCPASPSMTLA 95
M++ +ASP S+RF ASL++ +FFTY + D +H TI ++ FY I+ SM
Sbjct: 1 MLTLMASPPSNRFIASLQILPEFFTYFNSDEPHHSTIPLELFYIIMLRMEIRGFTSM--Y 60
Query: 96 FSGFR-INHSILLFRRSSH-PTFVVSGLVLLPYRRTEVGEIDYRYFFSIDVEQFKHIVTE 155
F+ F+ + +L F+RSSH P ++ L LP E+ IDY F SID + F+ IV E
Sbjct: 61 FTLFQPLTKVLLTFQRSSHEPKVMLCELDSLPLELEEMEHIDYGTFVSIDSQDFRRIVLE 120
Query: 156 LHYFYHDPSNSTLFFLIASKKVWCRVVFLTTLLYVTVIVVTMTDSQVKFSVGAIQIVLTK 215
L V + V++T+SQVKFS +IVLTK
Sbjct: 121 LD--------------------------------VHSVHVSLTNSQVKFSASRKEIVLTK 180
Query: 216 EENQCIIGRIGLETEVETQFLLILHPKEFFLDLAMESEPKRIW------FSLILV 263
EE +CIIG GL E +F + LHP FF +L+ ++ KR W FS I+V
Sbjct: 181 EERRCIIG--GLAEGKEFEFSITLHPLVFFHELSYKA--KRAWLFMSINFSTIIV 197
BLAST of Lcy01g006330 vs. ExPASy TrEMBL
Match:
A0A6J1DM64 (uncharacterized protein LOC111022279 OS=Momordica charantia OX=3673 GN=LOC111022279 PE=4 SV=1)
HSP 1 Score: 99.8 bits (247), Expect = 2.0e-17
Identity = 81/250 (32.40%), Postives = 120/250 (48.00%), Query Frame = 0
Query: 12 DVLMKTIKLLTHLSKQANMNCSPVMISFIASPSSSRFTASLRLSSQFFTYISLDRHYHCT 71
D ++ +L +S A+ N S S I S RF A+L++S FF++ S+DR+
Sbjct: 10 DTVLNATSILAQVSNTADANFSRDSFSIITFNPSPRFFATLQMSQPFFSHYSVDRNLCLR 69
Query: 72 IFIDAFYQIL---RNFLCPASPSMTLAFSGFRINHSILLFRRSSHPTFVVSGLVLLPYRR 131
+FI +F + R F PSMT+ F G IL F S+ T++ L L +
Sbjct: 70 MFIPSFRGAMLEGRFF-----PSMTMHFQG-NAALMILRFESPSYETYLKRQLTLSSSQV 129
Query: 132 TEVGEIDYRYFFSIDVEQFKHIVTELHYFYHDPSNSTLFFLIASKKVWCRVVFLTTLLYV 191
++G +D FFSI F+ I+ EL ++H P ++TL
Sbjct: 130 QDLGLVDQEKFFSIHSTDFRRIIRELAIYFHRPIHATL---------------------- 189
Query: 192 TVIVVTMTDSQVKFSVGAIQIVLTKEENQCIIGRIGLETEVETQFLLILHPKEFFLDLAM 251
TDSQV+F + +IVLTKE C+I G + E QF + L P FF++L+
Sbjct: 190 -------TDSQVRFYIADREIVLTKEGGHCVIE--GYQGRFEAQFQVSLRPMLFFINLSY 220
Query: 252 ESEPKRIWFS 259
+SE RIWFS
Sbjct: 250 QSE--RIWFS 220
BLAST of Lcy01g006330 vs. ExPASy TrEMBL
Match:
A0A6J1H6B6 (uncharacterized protein LOC111460008 OS=Cucurbita moschata OX=3662 GN=LOC111460008 PE=4 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 2.8e-16
Identity = 82/235 (34.89%), Postives = 116/235 (49.36%), Query Frame = 0
Query: 36 MISFIASPSSSRFTASLRLSSQFFTYISLDRHYHCTIFIDAFYQILRNFLCPASPSMTLA 95
M++ +ASP S+ F ASL++ +FFTY + D +H TI ++ FY + SM
Sbjct: 1 MLTLMASPPSNHFIASLQILPEFFTYFNSDEPHHSTIPLELFYITMLRMEIRGFTSM--Y 60
Query: 96 FSGFR-INHSILLFRRSSH-PTFVVSGLVLLPYRRTEVGEIDYRYFFSIDVEQFKHIVTE 155
F+ F+ + +L F+RSSH P ++ L LP E+ +IDY F SID + F+ IV E
Sbjct: 61 FTLFQPLTKVLLTFQRSSHEPKVMLCELDSLPLELEEMEQIDYGTFVSIDSQDFRRIVLE 120
Query: 156 LHYFYHDPSNSTLFFLIASKKVWCRVVFLTTLLYVTVIVVTMTDSQVKFSVGAIQIVLTK 215
L V + V++TDSQVKF +IVLTK
Sbjct: 121 LD--------------------------------VHSVHVSLTDSQVKFGASRKEIVLTK 180
Query: 216 EENQCIIGRIGLETEVETQFLLILHPKEFFLDLAMESEPKRIW------FSLILV 263
EE QCIIG GL +F + L P FF +L+ ++ KR W FS I+V
Sbjct: 181 EERQCIIG--GLAEGEGFEFSITLRPLAFFHELSYKA--KRAWLFMSINFSTIIV 197
BLAST of Lcy01g006330 vs. ExPASy TrEMBL
Match:
A0A6J1HJS7 (uncharacterized protein LOC111464207 OS=Cucurbita moschata OX=3662 GN=LOC111464207 PE=4 SV=1)
HSP 1 Score: 94.0 bits (232), Expect = 1.1e-15
Identity = 88/282 (31.21%), Postives = 128/282 (45.39%), Query Frame = 0
Query: 5 FKMERNSDVLMKTIKLLTHLSKQANMNCSPVMISFIASPSSSRFTASLRLSSQFFTYISL 64
FK++R + L+K L + ++A++ +P+M+S S F A L LS FFT+
Sbjct: 3 FKLDRFAP-LLKATSTLALIGEKADLRITPIMLSLEVKHPSPAFNAGLLLSPGFFTFFYT 62
Query: 65 DRHYHCTIFIDAFYQILRNFLCPASPSMTLAFSGFRINHSILLFRRSSHPTFVVS--GLV 124
++ +H +I + I N + S L F R N L F S V S L
Sbjct: 63 NKIHHYSIISLELFYITMNIMNARGFSSMLFFLVERSNRLYLRFDHSKIEPKVTSFRELT 122
Query: 125 LLPYRRTEVGEIDYRYFFSIDVEQFKHIVTELHYFYHDPSNSTLFFLIASKKVWCRVVFL 184
L P + +DY F SID F++IVTELH Y
Sbjct: 123 LNPPEMNHLARLDYATFVSIDSPTFRNIVTELHADYAH---------------------- 182
Query: 185 TTLLYVTVIVVTMTDSQVKFSVGAIQIVLTKEENQCIIGRIGLETEVETQFLLILHPKEF 244
VT+TDSQVKFS +IVLTK + QCIIG + + E+ +F++ L P F
Sbjct: 183 ----------VTLTDSQVKFSNADKEIVLTKRKKQCIIGDVSEKDEI--KFVITLQPTMF 242
Query: 245 FLDLAMESEPKRIWF-------SLILVQV-YYAQFFKFYNSK 277
F DL+ +S R+W S ++V V Y QF+ ++ K
Sbjct: 243 FHDLSHQS--ARVWLFKSSNSSSAMIVPVGMYTQFWVYFPPK 247
BLAST of Lcy01g006330 vs. NCBI nr
Match:
XP_022156121.1 (uncharacterized protein LOC111023086 [Momordica charantia])
HSP 1 Score: 185.7 bits (470), Expect = 5.6e-43
Identity = 116/254 (45.67%), Postives = 153/254 (60.24%), Query Frame = 0
Query: 10 NSDVLMKTIKLLTHLSKQANMNCSPVMISFIASPSSSRFTASLRLSSQFFTYISLDRHYH 69
N+ L+ + +L + +A++NC+P M+S I++P+S RFTA+LRL+ FF Y L+R++
Sbjct: 41 NTIPLINAMLVLVQFALKADLNCTPGMVSLISTPTSDRFTAALRLAPPFFIYYPLNRYFR 100
Query: 70 CTIFIDAFYQILRNFLCPASPSMTLAFSGFRINHSIL------LFRRSSHPTFVVSGLVL 129
CTI+ DAFY+IL N LC M L + RIN + L R + P + SGLV+
Sbjct: 101 CTIYADAFYRILFNMLCRGYSRMVLDYDE-RINEDRILLVFRSLMRDAEEP--LTSGLVV 160
Query: 130 LPYRRTEVGEIDYRYFFSIDVEQFKHIVTELHYFYHDPSNSTLFFLIASKKVWCRVVFLT 189
LP+ V EIDYRYFFSID E+F HIVTELH+FY
Sbjct: 161 LPHENQVVAEIDYRYFFSIDSEKFAHIVTELHFFY------------------------- 220
Query: 190 TLLYVTVIVVTMTDSQVKFSVGAIQIVLTKEENQCIIGRIGLETEVETQFLLILHPKEFF 249
I VTMTDSQVKF++GAI+IVLTKEEN+CIIGRIG E ET F + ++PK+FF
Sbjct: 221 -----DTIHVTMTDSQVKFALGAIEIVLTKEENECIIGRIG--EEEETHFEIYVNPKKFF 257
Query: 250 LDLAMESEPKRIWF 258
L S KR+WF
Sbjct: 281 YLLPARS--KRVWF 257
BLAST of Lcy01g006330 vs. NCBI nr
Match:
XP_023006012.1 (uncharacterized protein LOC111498889 [Cucurbita maxima])
HSP 1 Score: 102.4 bits (254), Expect = 6.3e-18
Identity = 85/235 (36.17%), Postives = 120/235 (51.06%), Query Frame = 0
Query: 36 MISFIASPSSSRFTASLRLSSQFFTYISLDRHYHCTIFIDAFYQILRNFLCPASPSMTLA 95
M++ +ASP S+RF ASL++ +FFTY + D +H TI ++ FY I+ SM
Sbjct: 1 MLTLMASPPSNRFIASLQILPEFFTYFNSDEPHHSTIPLELFYIIMLRMEIRGFTSM--Y 60
Query: 96 FSGFR-INHSILLFRRSSH-PTFVVSGLVLLPYRRTEVGEIDYRYFFSIDVEQFKHIVTE 155
F+ F+ + +L F+RSSH P ++ L LP E+ IDY F SID + F+ IV E
Sbjct: 61 FTLFQPLTKVLLTFQRSSHEPKVMLCELDSLPLELEEMEHIDYGTFVSIDSQDFRRIVLE 120
Query: 156 LHYFYHDPSNSTLFFLIASKKVWCRVVFLTTLLYVTVIVVTMTDSQVKFSVGAIQIVLTK 215
L V + V++T+SQVKFS +IVLTK
Sbjct: 121 LD--------------------------------VHSVHVSLTNSQVKFSASRKEIVLTK 180
Query: 216 EENQCIIGRIGLETEVETQFLLILHPKEFFLDLAMESEPKRIW------FSLILV 263
EE +CIIG GL E +F + LHP FF +L+ ++ KR W FS I+V
Sbjct: 181 EERRCIIG--GLAEGKEFEFSITLHPLVFFHELSYKA--KRAWLFMSINFSTIIV 197
BLAST of Lcy01g006330 vs. NCBI nr
Match:
XP_022155138.1 (uncharacterized protein LOC111022279 [Momordica charantia])
HSP 1 Score: 99.8 bits (247), Expect = 4.1e-17
Identity = 81/250 (32.40%), Postives = 120/250 (48.00%), Query Frame = 0
Query: 12 DVLMKTIKLLTHLSKQANMNCSPVMISFIASPSSSRFTASLRLSSQFFTYISLDRHYHCT 71
D ++ +L +S A+ N S S I S RF A+L++S FF++ S+DR+
Sbjct: 10 DTVLNATSILAQVSNTADANFSRDSFSIITFNPSPRFFATLQMSQPFFSHYSVDRNLCLR 69
Query: 72 IFIDAFYQIL---RNFLCPASPSMTLAFSGFRINHSILLFRRSSHPTFVVSGLVLLPYRR 131
+FI +F + R F PSMT+ F G IL F S+ T++ L L +
Sbjct: 70 MFIPSFRGAMLEGRFF-----PSMTMHFQG-NAALMILRFESPSYETYLKRQLTLSSSQV 129
Query: 132 TEVGEIDYRYFFSIDVEQFKHIVTELHYFYHDPSNSTLFFLIASKKVWCRVVFLTTLLYV 191
++G +D FFSI F+ I+ EL ++H P ++TL
Sbjct: 130 QDLGLVDQEKFFSIHSTDFRRIIRELAIYFHRPIHATL---------------------- 189
Query: 192 TVIVVTMTDSQVKFSVGAIQIVLTKEENQCIIGRIGLETEVETQFLLILHPKEFFLDLAM 251
TDSQV+F + +IVLTKE C+I G + E QF + L P FF++L+
Sbjct: 190 -------TDSQVRFYIADREIVLTKEGGHCVIE--GYQGRFEAQFQVSLRPMLFFINLSY 220
Query: 252 ESEPKRIWFS 259
+SE RIWFS
Sbjct: 250 QSE--RIWFS 220
BLAST of Lcy01g006330 vs. NCBI nr
Match:
XP_023548337.1 (uncharacterized protein LOC111807005 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 99.0 bits (245), Expect = 6.9e-17
Identity = 84/232 (36.21%), Postives = 119/232 (51.29%), Query Frame = 0
Query: 40 IASPSSSRFTASLRLSSQFFTYISLDRHYHCTIFIDAFYQI-LRNFLCPASPSMTLAFSG 99
+ASP S+ F ASL++ +FFTY + D +H TI ++ FY I LR +C + ++ F+
Sbjct: 1 MASPPSNHFIASLQILPEFFTYFNSDESHHSTIPLELFYIIMLRMEICGFT---SMYFTL 60
Query: 100 FR-INHSILLFRRSSH-PTFVVSGLVLLPYRRTEVGEIDYRYFFSIDVEQFKHIVTELHY 159
F+ + +L F+RSSH P ++ L LP E+ +IDY F SID + F+ IV EL
Sbjct: 61 FQPLTKVLLTFQRSSHEPKVMLCELDSLPLELEEMEQIDYGTFVSIDSQDFRRIVLELD- 120
Query: 160 FYHDPSNSTLFFLIASKKVWCRVVFLTTLLYVTVIVVTMTDSQVKFSVGAIQIVLTKEEN 219
V + V++TDSQVKF +IVLTKEE
Sbjct: 121 -------------------------------VHSVHVSLTDSQVKFGASRKEIVLTKEER 180
Query: 220 QCIIGRIGLETEVETQFLLILHPKEFFLDLAMESEPKRIW------FSLILV 263
QCIIG GL +F + LHP FF +L+ ++ KR W FS I+V
Sbjct: 181 QCIIG--GLAEGEGFEFSITLHPLAFFHELSYKA--KRAWLFMSINFSTIIV 193
BLAST of Lcy01g006330 vs. NCBI nr
Match:
XP_022958854.1 (uncharacterized protein LOC111460008 [Cucurbita moschata])
HSP 1 Score: 95.9 bits (237), Expect = 5.9e-16
Identity = 82/235 (34.89%), Postives = 116/235 (49.36%), Query Frame = 0
Query: 36 MISFIASPSSSRFTASLRLSSQFFTYISLDRHYHCTIFIDAFYQILRNFLCPASPSMTLA 95
M++ +ASP S+ F ASL++ +FFTY + D +H TI ++ FY + SM
Sbjct: 1 MLTLMASPPSNHFIASLQILPEFFTYFNSDEPHHSTIPLELFYITMLRMEIRGFTSM--Y 60
Query: 96 FSGFR-INHSILLFRRSSH-PTFVVSGLVLLPYRRTEVGEIDYRYFFSIDVEQFKHIVTE 155
F+ F+ + +L F+RSSH P ++ L LP E+ +IDY F SID + F+ IV E
Sbjct: 61 FTLFQPLTKVLLTFQRSSHEPKVMLCELDSLPLELEEMEQIDYGTFVSIDSQDFRRIVLE 120
Query: 156 LHYFYHDPSNSTLFFLIASKKVWCRVVFLTTLLYVTVIVVTMTDSQVKFSVGAIQIVLTK 215
L V + V++TDSQVKF +IVLTK
Sbjct: 121 LD--------------------------------VHSVHVSLTDSQVKFGASRKEIVLTK 180
Query: 216 EENQCIIGRIGLETEVETQFLLILHPKEFFLDLAMESEPKRIW------FSLILV 263
EE QCIIG GL +F + L P FF +L+ ++ KR W FS I+V
Sbjct: 181 EERQCIIG--GLAEGEGFEFSITLRPLAFFHELSYKA--KRAWLFMSINFSTIIV 197
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DTW1 | 2.7e-43 | 45.67 | uncharacterized protein LOC111023086 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1KUR4 | 3.0e-18 | 36.17 | uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889... | [more] |
A0A6J1DM64 | 2.0e-17 | 32.40 | uncharacterized protein LOC111022279 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A6J1H6B6 | 2.8e-16 | 34.89 | uncharacterized protein LOC111460008 OS=Cucurbita moschata OX=3662 GN=LOC1114600... | [more] |
A0A6J1HJS7 | 1.1e-15 | 31.21 | uncharacterized protein LOC111464207 OS=Cucurbita moschata OX=3662 GN=LOC1114642... | [more] |
Match Name | E-value | Identity | Description | |