Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGATTGATGAATTGATACACGAATGGAAAAAGTTCAAGTTGATAGAAGAAGAGAAAGAAGCCTGGATTACCTTAGAGCCAGAGGAAGTAACAAAGATTGAGAATTACATAGACCACAATCTGGTGGGAAAAGTCCTGACAAACAGAAACATATCCAAGTTAGCTATCAAGAATGCAATGTTGGGAGCATGGAAAACAAGAAAGGATTTTCACGTAGAGACAGTCAGCAAAAATACATTTTCATTCAGCTTTGAAAGTAAAGATGATAAAGAATGGATAAACAACAATGGTCCTTGGTTATTCGATAGAAATCTTGTTGTTCTTGAAGCCCCAACAAAAAATATAAGGATTAACGAACTGGAGTTCAACAAAACAGACTTATGGCTGAGAATTATCAACCTACCAGTAGGTTTCCGGAATGAGTTCATAGCAAGGAAGATAGGTAACATATTGGGAACTTTTCAAGACTGGGACAGCGACAAAAATAGCTCAGCCTGGGGCAATAGTCTTCGAATCAGAGTAAGACTAGACATATCCAAACCTTTGCGAAGAGGCTTTATGCTCCGAACGAATGGTATTTGTAAAGACTGTTGGATTTCAATTAGGTATGAAAGGCTTCCAGATCTGTGTTTTAACTGCGGAAAGATAGGACATGTTGCCAAAGATTGCTATGGAGATAAAAATGCTGAAAGGACGCAAGAAAGGAATTTCGAATATGGTTCTTGGATGAAGTTTCAAGGCTTCGCCTCTTATTTCAAGGAAAACTATGCAAACAAGAGCAATGGAGATGAAACTGAGGAAGCCCAGAAGGGAGATGAAAATACTGAAGGTGAAAAGAGACAATGGGAGGGACTAGATGTAGATCTGAACCAAGCAAGTCCAATAAATGAAGAAGTTGATCTATCATTCAGTCAGGAGAAATGGAAAGAATTATACTCCGATGTATTACCAAGAAAAGAAAGGATTGAGGAAGAAATAAGAAGGAAAGCAGCCCAGTTGAGAGAAAGTATCAAGGAAATTGAACCCGTTGAGAACAATGTTGATCCGAGTAATGAAGCTTCTGGGAGCGCTAGTTCATCAAAGAAAAGAATGAGTTGGAAAAGGAAAAAGTATATGGAATTAAGACCTACAAGCTCAAAGGATAGTCTGGGATCTCAAAAAAGGAAGGCTGAGGAAATCAATGACAATGGAGGGAAAAGAAGGAAAGAAGGAGCAGATGATGAGATGGAATTGGGACCTTTTTCTGAAAATTTGGCAGTGGCTGGATACCAGCCCTGCCCTGATCAATGA
mRNA sequence
ATGGAGATTGATGAATTGATACACGAATGGAAAAAGTTCAAGTTGATAGAAGAAGAGAAAGAAGCCTGGATTACCTTAGAGCCAGAGGAAGTAACAAAGATTGAGAATTACATAGACCACAATCTGGTGGGAAAAGTCCTGACAAACAGAAACATATCCAAGTTAGCTATCAAGAATGCAATGTTGGGAGCATGGAAAACAAGAAAGGATTTTCACGTAGAGACAGTCAGCAAAAATACATTTTCATTCAGCTTTGAAAGTAAAGATGATAAAGAATGGATAAACAACAATGGTCCTTGGTTATTCGATAGAAATCTTGTTGTTCTTGAAGCCCCAACAAAAAATATAAGGATTAACGAACTGGAGTTCAACAAAACAGACTTATGGCTGAGAATTATCAACCTACCAGTAGGTTTCCGGAATGAGTTCATAGCAAGGAAGATAGGTAACATATTGGGAACTTTTCAAGACTGGGACAGCGACAAAAATAGCTCAGCCTGGGGCAATAGTCTTCGAATCAGAGTAAGACTAGACATATCCAAACCTTTGCGAAGAGGCTTTATGCTCCGAACGAATGGTATTTGTAAAGACTGTTGGATTTCAATTAGGTATGAAAGGCTTCCAGATCTGTGTTTTAACTGCGGAAAGATAGGACATGTTGCCAAAGATTGCTATGGAGATAAAAATGCTGAAAGGACGCAAGAAAGGAATTTCGAATATGGTTCTTGGATGAAGTTTCAAGGCTTCGCCTCTTATTTCAAGGAAAACTATGCAAACAAGAGCAATGGAGATGAAACTGAGGAAGCCCAGAAGGGAGATGAAAATACTGAAGGTGAAAAGAGACAATGGGAGGGACTAGATGTAGATCTGAACCAAGCAAGTCCAATAAATGAAGAAGTTGATCTATCATTCAGTCAGGAGAAATGGAAAGAATTATACTCCGATGTATTACCAAGAAAAGAAAGGATTGAGGAAGAAATAAGAAGGAAAGCAGCCCAGTTGAGAGAAAGTATCAAGGAAATTGAACCCGTTGAGAACAATGTTGATCCGAGTAATGAAGCTTCTGGGAGCGCTAGTTCATCAAAGAAAAGAATGAGTTGGAAAAGGAAAAAGTATATGGAATTAAGACCTACAAGCTCAAAGGATAGTCTGGGATCTCAAAAAAGGAAGGCTGAGGAAATCAATGACAATGGAGGGAAAAGAAGGAAAGAAGGAGCAGATGATGAGATGGAATTGGGACCTTTTTCTGAAAATTTGGCAGTGGCTGGATACCAGCCCTGCCCTGATCAATGA
Coding sequence (CDS)
ATGGAGATTGATGAATTGATACACGAATGGAAAAAGTTCAAGTTGATAGAAGAAGAGAAAGAAGCCTGGATTACCTTAGAGCCAGAGGAAGTAACAAAGATTGAGAATTACATAGACCACAATCTGGTGGGAAAAGTCCTGACAAACAGAAACATATCCAAGTTAGCTATCAAGAATGCAATGTTGGGAGCATGGAAAACAAGAAAGGATTTTCACGTAGAGACAGTCAGCAAAAATACATTTTCATTCAGCTTTGAAAGTAAAGATGATAAAGAATGGATAAACAACAATGGTCCTTGGTTATTCGATAGAAATCTTGTTGTTCTTGAAGCCCCAACAAAAAATATAAGGATTAACGAACTGGAGTTCAACAAAACAGACTTATGGCTGAGAATTATCAACCTACCAGTAGGTTTCCGGAATGAGTTCATAGCAAGGAAGATAGGTAACATATTGGGAACTTTTCAAGACTGGGACAGCGACAAAAATAGCTCAGCCTGGGGCAATAGTCTTCGAATCAGAGTAAGACTAGACATATCCAAACCTTTGCGAAGAGGCTTTATGCTCCGAACGAATGGTATTTGTAAAGACTGTTGGATTTCAATTAGGTATGAAAGGCTTCCAGATCTGTGTTTTAACTGCGGAAAGATAGGACATGTTGCCAAAGATTGCTATGGAGATAAAAATGCTGAAAGGACGCAAGAAAGGAATTTCGAATATGGTTCTTGGATGAAGTTTCAAGGCTTCGCCTCTTATTTCAAGGAAAACTATGCAAACAAGAGCAATGGAGATGAAACTGAGGAAGCCCAGAAGGGAGATGAAAATACTGAAGGTGAAAAGAGACAATGGGAGGGACTAGATGTAGATCTGAACCAAGCAAGTCCAATAAATGAAGAAGTTGATCTATCATTCAGTCAGGAGAAATGGAAAGAATTATACTCCGATGTATTACCAAGAAAAGAAAGGATTGAGGAAGAAATAAGAAGGAAAGCAGCCCAGTTGAGAGAAAGTATCAAGGAAATTGAACCCGTTGAGAACAATGTTGATCCGAGTAATGAAGCTTCTGGGAGCGCTAGTTCATCAAAGAAAAGAATGAGTTGGAAAAGGAAAAAGTATATGGAATTAAGACCTACAAGCTCAAAGGATAGTCTGGGATCTCAAAAAAGGAAGGCTGAGGAAATCAATGACAATGGAGGGAAAAGAAGGAAAGAAGGAGCAGATGATGAGATGGAATTGGGACCTTTTTCTGAAAATTTGGCAGTGGCTGGATACCAGCCCTGCCCTGATCAATGA
Protein sequence
MEIDELIHEWKKFKLIEEEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNAMLGAWKTRKDFHVETVSKNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINELEFNKTDLWLRIINLPVGFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDISKPLRRGFMLRTNGICKDCWISIRYERLPDLCFNCGKIGHVAKDCYGDKNAERTQERNFEYGSWMKFQGFASYFKENYANKSNGDETEEAQKGDENTEGEKRQWEGLDVDLNQASPINEEVDLSFSQEKWKELYSDVLPRKERIEEEIRRKAAQLRESIKEIEPVENNVDPSNEASGSASSSKKRMSWKRKKYMELRPTSSKDSLGSQKRKAEEINDNGGKRRKEGADDEMELGPFSENLAVAGYQPCPDQ
Homology
BLAST of Lcy01g006210 vs. ExPASy TrEMBL
Match:
A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)
HSP 1 Score: 202.2 bits (513), Expect = 4.3e-48
Identity = 110/302 (36.42%), Postives = 168/302 (55.63%), Query Frame = 0
Query: 1 MEIDELIHEWKKFKLIEEEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNA 60
M+ + L+ +W+KFKL EE E + ++ + V E + ++LVGK+L R IS +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 MLGAWKTRKDFHVETVSKNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINE 120
+L AWK VE++ KN F F F + D + GPW FD+ L+VL+ P + I+E
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 LEFNKTDLWLRIINLPVGFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDIS 180
LEFN+ W+ + +LP+ + N+ +A ++GN +G F D D ++ +WG SLRIRV +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 KPLRRGFMLRTNGICKDCWISIRYERLPDLCFNCGKIGHVAKDCYGDKNAERTQER-NFE 240
KPLRRG + +G CWI I+YERLPD C+ CG IGH + DC A + R E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
Query: 241 YGSWMKFQGFASYFKENYANKSNGDE-------TEEAQKGDENTEGEKRQWEGLDVDLNQ 295
YG W++F G + ++ KS E ++G E T+ + + D +Q
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQ 300
BLAST of Lcy01g006210 vs. ExPASy TrEMBL
Match:
A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 2.2e-44
Identity = 89/249 (35.74%), Postives = 143/249 (57.43%), Query Frame = 0
Query: 1 MEIDELIHEWKKFKLIEEEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNA 60
M L+ EWK FKL EE + + ++ + ++ +L+ K+L+ R+IS +KN
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 61 MLGAWKTR-KDFHVETVSKNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRIN 120
+ AWK K F V+ + N F F+F D+ I GPW FDR L++++ P +
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 121 ELEFNKTDLWLRIINLPVGFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDI 180
+++F LW+ +L + N+ +A ++GN +G F+D +S+ N+ WG+ LR+RVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 181 SKPLRRGFMLRTNGICKDCWISIRYERLPDLCFNCGKIGHVAKDCYGDKNAERTQERNFE 240
KPL RG L +G CWI I+YERLPD ++CG++ H+ KDC + +N +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDC--SDCCVDSVSKNLQ 240
Query: 241 YGSWMKFQG 249
YG W++FQG
Sbjct: 241 YGPWLRFQG 247
BLAST of Lcy01g006210 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 184.5 bits (467), Expect = 9.4e-43
Identity = 95/245 (38.78%), Postives = 139/245 (56.73%), Query Frame = 0
Query: 5 ELIHEWKKFKLIEEEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNAMLGA 64
+L+ EWK FKL EE+E I ++ + ++ LVGK+ R I+ +KN M A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 65 WKTRKD-FHVETVSKNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINELEF 124
WK + F V+++ N F FSF D+ I +GPW FDR LV++ P I +EL+F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 125 NKTDLWLRIINLPVGFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDISKPL 184
K +W+R +LP+G +A ++GN LG F++ D D + WG++LR+RV LDISKPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
Query: 185 RRGFMLRTNGICKDCWISIRYERLPDLCFNCGKIGHVAKDCYGDKNAERTQERNFEYGSW 244
RRG L +G WI I+YERLPD C++CG + + +YGSW
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------------SSSRKKHQYGSW 234
Query: 245 MKFQG 249
+++QG
Sbjct: 245 LRYQG 234
BLAST of Lcy01g006210 vs. ExPASy TrEMBL
Match:
A0A2Z6NZV1 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_140560 PE=4 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 1.8e-38
Identity = 91/280 (32.50%), Postives = 156/280 (55.71%), Query Frame = 0
Query: 18 EEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNAMLGAWKTRKDFHVETVS 77
E++E IT+E EE+ + E LVGK+ T + A K + AW+ + V+ +
Sbjct: 12 EDEEDCITVEAEEICEEEETFKRTLVGKLWTENPYNVRAFKQTIAQAWRLKNSIEVQDLE 71
Query: 78 KNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINELEFNKTDLWLRIINLPV 137
+N F F F +K D + + NGPW FDRNL++L + + ++L+ + + W+R+ +LP
Sbjct: 72 ENLFLFRFTTKKDADTVLRNGPWSFDRNLLILHRVSGEEQPSDLDMHNVNFWVRVYDLPF 131
Query: 138 GFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDISKPLRRGFMLRTNGICKD 197
R+E +A+K+GNI+G F++ D K+++ G LR++ LD+ KPL+RG ++ K+
Sbjct: 132 KLRSEAMAKKLGNIMGNFEEVD-PKDANRTGRFLRLKASLDLRKPLKRGTKIKFQD--KN 191
Query: 198 CWISIRYERLPDLCFNCGKIGHVAKDC-----YGDKNAERTQERNFEYGSWMKFQGFASY 257
W+ +YERLP+ CF CGKIGH K+C + N E++ YG W++
Sbjct: 192 MWVDFKYERLPNFCFACGKIGHQMKECEDVEDVDENNYSDIAEKSQAYGPWLRASPLPRI 251
Query: 258 FKENYANKSNGDETE-----EAQKGDENTEGEKRQWEGLD 288
F+E + S+G ++ +Q +EG+K + + +D
Sbjct: 252 FEEPRKDASSGSCSKNLFPSSSQSKGGQSEGKKDKEQEVD 288
BLAST of Lcy01g006210 vs. ExPASy TrEMBL
Match:
A0A392MLA7 (Zinc CCHC-type-like protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0009196 PE=4 SV=1)
HSP 1 Score: 169.9 bits (429), Expect = 2.4e-38
Identity = 101/301 (33.55%), Postives = 161/301 (53.49%), Query Frame = 0
Query: 9 EWKKFKLIEEEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNAMLGAWKTR 68
EW+K KL +EE+E +E EE E + D +LVGK+ T + K + AW+ +
Sbjct: 39 EWRKLKLSKEEEEGIEAVESEECG--EEFFDRSLVGKLWTVDPFNVRIFKQVITQAWRLK 98
Query: 69 KDFHVETVSKNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINELEFNKTDL 128
V+ ++KN F F F SK D + + NGPW FDRNLVVL+ + + ++LE + +
Sbjct: 99 NTVEVQDLNKNLFLFRFASKRDADSVMKNGPWSFDRNLVVLKRISGEEQPSDLEMHTGEF 158
Query: 129 WLRIINLPVGFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDISKPLRRGFM 188
W RI +LP+ R+E +A+K+G+I+G+F + DS K+ + G LR++ +D+ KPL+RG +
Sbjct: 159 WTRIYDLPLKLRSESMAKKLGDIIGSFMEVDS-KDCNRLGKFLRVKTSIDLRKPLKRGTI 218
Query: 189 LRTNGICKDCWISIRYERLPDLCFNCGKIGHVAKDC-----YGDKNAERTQERNFEYGSW 248
++ G KD + ++ERLP CF CG+IGH KDC D + + +E+ +G W
Sbjct: 219 VKYQG--KDLKVFFKFERLPTFCFVCGRIGHQIKDCEELESKDDADFDDIEEKELPFGQW 278
Query: 249 MKFQGFASYFKENYANKSNGD---------ETEEAQKGDENTEGEKRQWEGLDVDLNQAS 296
++ + E S+G T ++ +GE Q V L A+
Sbjct: 279 LRASPLPKFTGEFKKENSSGSCSKSLFSEPSTNRKASTEDKEKGEVEQPVVSPVMLMSAT 334
BLAST of Lcy01g006210 vs. NCBI nr
Match:
XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])
HSP 1 Score: 202.2 bits (513), Expect = 9.0e-48
Identity = 110/302 (36.42%), Postives = 168/302 (55.63%), Query Frame = 0
Query: 1 MEIDELIHEWKKFKLIEEEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNA 60
M+ + L+ +W+KFKL EE E + ++ + V E + ++LVGK+L R IS +
Sbjct: 1 MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60
Query: 61 MLGAWKTRKDFHVETVSKNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINE 120
+L AWK VE++ KN F F F + D + GPW FD+ L+VL+ P + I+E
Sbjct: 61 LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120
Query: 121 LEFNKTDLWLRIINLPVGFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDIS 180
LEFN+ W+ + +LP+ + N+ +A ++GN +G F D D ++ +WG SLRIRV +DI+
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180
Query: 181 KPLRRGFMLRTNGICKDCWISIRYERLPDLCFNCGKIGHVAKDCYGDKNAERTQER-NFE 240
KPLRRG + +G CWI I+YERLPD C+ CG IGH + DC A + R E
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240
Query: 241 YGSWMKFQGFASYFKENYANKSNGDE-------TEEAQKGDENTEGEKRQWEGLDVDLNQ 295
YG W++F G + ++ KS E ++G E T+ + + D +Q
Sbjct: 241 YGPWLRFVGSKAGAQKGRKGKSPAREDSCGSSSMNSKERGVEETKQQLSEQTNQDGFQSQ 300
BLAST of Lcy01g006210 vs. NCBI nr
Match:
XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])
HSP 1 Score: 189.9 bits (481), Expect = 4.6e-44
Identity = 89/249 (35.74%), Postives = 143/249 (57.43%), Query Frame = 0
Query: 1 MEIDELIHEWKKFKLIEEEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNA 60
M L+ EWK FKL EE + + ++ + ++ +L+ K+L+ R+IS +KN
Sbjct: 1 MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60
Query: 61 MLGAWKTR-KDFHVETVSKNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRIN 120
+ AWK K F V+ + N F F+F D+ I GPW FDR L++++ P +
Sbjct: 61 LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120
Query: 121 ELEFNKTDLWLRIINLPVGFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDI 180
+++F LW+ +L + N+ +A ++GN +G F+D +S+ N+ WG+ LR+RVR D+
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDV 180
Query: 181 SKPLRRGFMLRTNGICKDCWISIRYERLPDLCFNCGKIGHVAKDCYGDKNAERTQERNFE 240
KPL RG L +G CWI I+YERLPD ++CG++ H+ KDC + +N +
Sbjct: 181 MKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDC--SDCCVDSVSKNLQ 240
Query: 241 YGSWMKFQG 249
YG W++FQG
Sbjct: 241 YGPWLRFQG 247
BLAST of Lcy01g006210 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 184.5 bits (467), Expect = 1.9e-42
Identity = 95/245 (38.78%), Postives = 139/245 (56.73%), Query Frame = 0
Query: 5 ELIHEWKKFKLIEEEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNAMLGA 64
+L+ EWK FKL EE+E I ++ + ++ LVGK+ R I+ +KN M A
Sbjct: 5 DLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNTMRTA 64
Query: 65 WKTRKD-FHVETVSKNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINELEF 124
WK + F V+++ N F FSF D+ I +GPW FDR LV++ P I +EL+F
Sbjct: 65 WKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPSELDF 124
Query: 125 NKTDLWLRIINLPVGFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDISKPL 184
K +W+R +LP+G +A ++GN LG F++ D D + WG++LR+RV LDISKPL
Sbjct: 125 TKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVMLDISKPL 184
Query: 185 RRGFMLRTNGICKDCWISIRYERLPDLCFNCGKIGHVAKDCYGDKNAERTQERNFEYGSW 244
RRG L +G WI I+YERLPD C++CG + + +YGSW
Sbjct: 185 RRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------------SSSRKKHQYGSW 234
Query: 245 MKFQG 249
+++QG
Sbjct: 245 LRYQG 234
BLAST of Lcy01g006210 vs. NCBI nr
Match:
GAU41525.1 (hypothetical protein TSUD_140560 [Trifolium subterraneum])
HSP 1 Score: 170.2 bits (430), Expect = 3.8e-38
Identity = 91/280 (32.50%), Postives = 156/280 (55.71%), Query Frame = 0
Query: 18 EEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNAMLGAWKTRKDFHVETVS 77
E++E IT+E EE+ + E LVGK+ T + A K + AW+ + V+ +
Sbjct: 12 EDEEDCITVEAEEICEEEETFKRTLVGKLWTENPYNVRAFKQTIAQAWRLKNSIEVQDLE 71
Query: 78 KNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINELEFNKTDLWLRIINLPV 137
+N F F F +K D + + NGPW FDRNL++L + + ++L+ + + W+R+ +LP
Sbjct: 72 ENLFLFRFTTKKDADTVLRNGPWSFDRNLLILHRVSGEEQPSDLDMHNVNFWVRVYDLPF 131
Query: 138 GFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDISKPLRRGFMLRTNGICKD 197
R+E +A+K+GNI+G F++ D K+++ G LR++ LD+ KPL+RG ++ K+
Sbjct: 132 KLRSEAMAKKLGNIMGNFEEVD-PKDANRTGRFLRLKASLDLRKPLKRGTKIKFQD--KN 191
Query: 198 CWISIRYERLPDLCFNCGKIGHVAKDC-----YGDKNAERTQERNFEYGSWMKFQGFASY 257
W+ +YERLP+ CF CGKIGH K+C + N E++ YG W++
Sbjct: 192 MWVDFKYERLPNFCFACGKIGHQMKECEDVEDVDENNYSDIAEKSQAYGPWLRASPLPRI 251
Query: 258 FKENYANKSNGDETE-----EAQKGDENTEGEKRQWEGLD 288
F+E + S+G ++ +Q +EG+K + + +D
Sbjct: 252 FEEPRKDASSGSCSKNLFPSSSQSKGGQSEGKKDKEQEVD 288
BLAST of Lcy01g006210 vs. NCBI nr
Match:
MCH88312.1 (zinc CCHC-type-like protein [Trifolium medium])
HSP 1 Score: 169.9 bits (429), Expect = 4.9e-38
Identity = 101/301 (33.55%), Postives = 161/301 (53.49%), Query Frame = 0
Query: 9 EWKKFKLIEEEKEAWITLEPEEVTKIENYIDHNLVGKVLTNRNISKLAIKNAMLGAWKTR 68
EW+K KL +EE+E +E EE E + D +LVGK+ T + K + AW+ +
Sbjct: 39 EWRKLKLSKEEEEGIEAVESEECG--EEFFDRSLVGKLWTVDPFNVRIFKQVITQAWRLK 98
Query: 69 KDFHVETVSKNTFSFSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINELEFNKTDL 128
V+ ++KN F F F SK D + + NGPW FDRNLVVL+ + + ++LE + +
Sbjct: 99 NTVEVQDLNKNLFLFRFASKRDADSVMKNGPWSFDRNLVVLKRISGEEQPSDLEMHTGEF 158
Query: 129 WLRIINLPVGFRNEFIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDISKPLRRGFM 188
W RI +LP+ R+E +A+K+G+I+G+F + DS K+ + G LR++ +D+ KPL+RG +
Sbjct: 159 WTRIYDLPLKLRSESMAKKLGDIIGSFMEVDS-KDCNRLGKFLRVKTSIDLRKPLKRGTI 218
Query: 189 LRTNGICKDCWISIRYERLPDLCFNCGKIGHVAKDC-----YGDKNAERTQERNFEYGSW 248
++ G KD + ++ERLP CF CG+IGH KDC D + + +E+ +G W
Sbjct: 219 VKYQG--KDLKVFFKFERLPTFCFVCGRIGHQIKDCEELESKDDADFDDIEEKELPFGQW 278
Query: 249 MKFQGFASYFKENYANKSNGD---------ETEEAQKGDENTEGEKRQWEGLDVDLNQAS 296
++ + E S+G T ++ +GE Q V L A+
Sbjct: 279 LRASPLPKFTGEFKKENSSGSCSKSLFSEPSTNRKASTEDKEKGEVEQPVVSPVMLMSAT 334
BLAST of Lcy01g006210 vs. TAIR 10
Match:
AT3G42140.1 (zinc ion binding;nucleic acid binding )
HSP 1 Score: 51.2 bits (121), Expect = 2.4e-06
Identity = 32/142 (22.54%), Postives = 57/142 (40.14%), Query Frame = 0
Query: 83 FSFESKDDKEWINNNGPWLFDRNLVVLEAPTKNIRINELEFNKTDLWLRIINLPVGFRNE 142
F F+S++ I GPW F+ + V++ TK ++ EF + W++I +P+ F
Sbjct: 64 FLFQSEESMFSILRRGPWSFNDWMCVIQRWTK--LHSDAEFKRIPFWIQIRGIPLRFLTA 123
Query: 143 FIARKIGNILGTFQDWDSDKNSSAWGNSLRIRVRLDISKPLRRGFMLRTNGICKDCWISI 202
I IG +G F + + ++ S +
Sbjct: 124 RIITSIGERMGLFLETNLGRDVSV---------------------------------LKF 170
Query: 203 RYERLPDLCFNCGKIGHVAKDC 225
+YE+L + C CG + H A +C
Sbjct: 184 QYEKLKNFCTTCGMLSHDASEC 170
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DU55 | 4.3e-48 | 36.42 | uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1BSZ1 | 2.2e-44 | 35.74 | uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... | [more] |
A0A6J1DX30 | 9.4e-43 | 38.78 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A2Z6NZV1 | 1.8e-38 | 32.50 | Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_140560 PE=4 SV... | [more] |
A0A392MLA7 | 2.4e-38 | 33.55 | Zinc CCHC-type-like protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_000... | [more] |
Match Name | E-value | Identity | Description | |
XP_022156185.1 | 9.0e-48 | 36.42 | uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... | [more] |
XP_022132681.1 | 4.6e-44 | 35.74 | uncharacterized protein LOC111005481 [Momordica charantia] | [more] |
XP_022158377.1 | 1.9e-42 | 38.78 | uncharacterized protein LOC111024874 [Momordica charantia] | [more] |
GAU41525.1 | 3.8e-38 | 32.50 | hypothetical protein TSUD_140560 [Trifolium subterraneum] | [more] |
MCH88312.1 | 4.9e-38 | 33.55 | zinc CCHC-type-like protein [Trifolium medium] | [more] |
Match Name | E-value | Identity | Description | |
AT3G42140.1 | 2.4e-06 | 22.54 | zinc ion binding;nucleic acid binding | [more] |