Lcy01g005920 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g005920
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Location	Chr01: 8408192 .. 8411727 (-)
RNA-Seq Expression	Lcy01g005920
Synteny	Lcy01g005920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACAATGGATATGCGTTTGGTAAGCCCAGATCTAAAAATAGAATCCAAAAACAATGACTCAAAAAGCCCAAATTCGGAAAAAACAACTTTTTATTGTTTTCAAATTCTATTCTCCAAAATTTGAAACCACGGGATTCACTTGATCTCGTCAACGACAATTCATTTTCATCTTTTTTCTCTTTCTATACGCATTTTCACACTCCACCCTCTCTAGGGTTTTCATTTTCTTTGCAACATTTTCCCCTGAAAAAGGTATGCCCCTCTCTAATTTTCTTTTATTAGCTATGTTTTCTTCTATTTGGCTTTTTAATTTCACCCTTTTTGGAATTACATTTTCCTCTGTAGAACAACATTTTTTTCCTTAAAACTTTTTTTTGGTTCTTCTCTAAGGAAAAAAATGTCTAAGAAAATGATCAAAAGGAGATTAAAAAAAGACAAAAAAGAAGAGGAAAAGTGGAGTGAGTTCTTGAGGGATTCTAGTGAGTTCTTGAGGGATTCTGGCTTTTTCTTTTGGTTGGATTTGAGATTTGTTGAAGATTTGTTTGGGAGCATTAGATTAAATTTTTTTTTGCTAATTTTAGTTTTGAACAAAGAATAAATATGGCAGTGTTGCATTTGTGCTCACCATTTTGCATTTTGTGCTTCAAGAAGACTACTTTTTGCATTTTTTGCTTCCAAAAAAATTCCAAAGAGGCTCTGTTTAAAATTTGTTTGGGAGTTGGGTTGAGATTTTTTTTTTTTTTTTAAGATTTATTTTAGAATAGTTAGTTTTGATTTTTCTATTCTAGATTTTAGTTTTAAGCTAATATTAACTATAGTTTTTTGCATTCTAAAAATACTCCAAAAACAAAAATTGCTCTGTTTGATTCTATTTTATTCTAATATTAATATGAAAGTGGCCTCTTGTATGAAATATCATGTTAATAAGGGAGATCTTAACTTGATAGAATTGGAATAAATTAAATTTTCTTTTGGAAGATTTCTTTGGAGGTTGTATTCTTTTTGTTTGTTTGTTTGCTTTAGAATTCTGGATTTTGATATTTCAATTTTAATTAACTTTTAGTTTCAATTAGTAGTTTTTGCCTTTTGTACTCCTAAAGGAGGACTATGTTTGATTCTAATGTTAATATGAAAGGTGACCTTGCAACTATATGAAATATATATAAAATTTATGAGAGAAATCTTGATAGAATTTGAGTGATTTTTTTTTTGTTTTTTTTTTTTTTGTTTTTTTTTGTTTTTGTTTGGTAGATTGGTTTTGAGGTTAGATTTAGATTTTTCTATTATTCTATCAAATGATATTCAACCATTCAATAATGATCAATAAAATACATAGAAACCATTTTTGGAATTTATTTTTTGTTTTTGTCTTTAATTTTAAATTTTGTTTCCTTTCAACAATGATGATATGTTTTTGTATTAGTTTGACTAGTTTTTTGAAATATACATTTATATTGTTCTTTTTTATGTTTACATCTAATGTGTGTATAAAAACTTAGATGGCTCAAAGTCATGATGAGTGTGATGAAGTGGCTCAATGGCCTACTCCAATTGAGACATATTTCATCCATTTATTACATGAGGAAGCCAAAAAAGGATTACAAACCTCAACTTTACATAAGAAATCTTGAGCGACCATAGACAATGCTATACTTACAAAGTTTGGCAAGAGGTATACTATGCCAAAATTAAGAACGAAATATAATAGGTTGAGGAAGTTACATCGTGAGTTTTCTACACTACTGCAACAAGCTGGGGTAGGATGAGATCCTATCACCAACACAGTCACCGCAAAAGAGGATGCGTGGCAAAAACACTTAAAGTTACAAACTTAGCTATTACTATATTGTTGAATTTAATCCCCTAACTAATTATTATTTGTGCAGGCGTTCCCGTGTTATTCGATGAATTGCTTCCGGTTACCAAAGAAGTTGTTTTGGTGGGGTGGGGAGAAGGTGGATCGAGGAATCCATTGGGTGAGTTGGAAATCCCTATGTAAGCCTAAGTGCTATGGTGGGATGGGCTTCAGGGACCTGGAGATTTTCAACCAAGCCTTGCTGGCAAAACAATGTTGGAGAATTGTCCAGGATCCATCTTCCCTTCTGGCGCGTGTTCTGAAGGGCAAATATTACCCTTTCGTTGATTTCTTGAGGGCAGAGGTGGGGTCGAGACCGTTCTTTATATGGAGGAGTTTGCTGTAGGGGAGAGAGCTTTTAGAGAGGGACTTGCGGTGGCGGATTGGGAATGGGGAAGGTGTGCCTGTATATGGAGCGAAGTGGCTTCCTGATGATGGAGATCTTAGAGTGCGGTCACCGGTAACATTGGCGCCTGAGACTCGGGTCGCAAATCTGATGACGGCAACTGGGCAGTGGAACGAAGGGCTCATCCGGCAGCACTTTAGCCCCCACGAGGTCAGCCTAATTTTATCTATTCCGGTGCGGGCTGGAGTGGAGGATAAAGTTGTTTGGCATTATGAGAAGTCGGGCCTCTTTTCGGTGAAAAACGGATACCGGTTAGGACAATCAACTTGGCTTGCGCAGTTCCCGTCATCTTCTTCAAACGAGTCGGTAATGGGTTGGTGGAAGGGGTGTTGGAAAATGCTTATCCCAAATAAGATCAAGATTTTCCTTTGGAGACTTAGTTTAGACTGCCTGCCCACAATTGATAACTTGTGTATTCGGGGTTGTGACTTTCCGAACGTATGTGGCCTTTGTATGCGGAGTGGGGAATCCAGTCTGCATGTTTTCTAGCATTGCAAGTTTGTTAAGATGGTGTTGATGGAGTCCGAGTTTGGAAGTTTGATTCATAATGTGTAGGCAGGGTCTATGTTCTATCTCCTTATAGAGGTGAGGGATAAGGTCGGTTGGGGAAGATTTGAGGTGTTTGTGGTGGTGTTGTGGGCTATGTGGAACTGTCGAAATCAGCGAAAATTTAAGAGCCTAAAACCAGTGGGCGGCGAGTTATGTCTCGTCGTTCCAGCAGACGGCCTTATCCTGTGGAGTAGAGGTGCTAAGTGACCTTGCAAGGGAAAATGTGAGATGGAGCCCCCCAGAGGATGTGTTGTATAAGGTGAACGTAGATGCGTTCTTTAGAAGGGAGCGATGGCAGGCGGGTTTAGGTGTGGTGGTTCGGGATTCTTTTGGACAGGTTATGTTGTCGGCAACATTGGTGCAGTGGCATGTGCGGTGTCCGGAGATGGCCGAAGGTTGGGATGCGGTAAAGGGGATGAGACTAGCATTGGAGATGGGCCTGTTCCCATTGGTGTTGGAGACCGATTCCAATCGAGTGGCTGGCATTTTCCAGGATGAGGCAGGGGATGATTTTTCGGATGTGGGTGCACTTGTGGCTGATTTACGAAAGGACGTACCAGGTTCTTCCTTTCTCAGCTGCATGTTCACTCGAAGAGAGAGGAATGGGGTGGCACACCAGTTGGCTTGTCTGGCAAGGAGGGACGAAGAATCTAGGGTGTGGGTTGAGTCTGTGCCCCAGTGTGTTGAGGCTTTGGTCCTTTTTGATATGGCATTGTTGTGA

mRNA sequence

ATGGATACAATGGATATGCGTTTGGCGTTCCCGTGTTATTCGATGAATTGCTTCCGGTTACCAAAGAAGTTGTTTTGGTGGGGTGGGGAGAAGGTGGATCGAGGAATCCATTGGGTGAGTTGGAAATCCCTATGTAAGCCTAAGTGCTATGGTGGGATGGGCTTCAGGGACCTGGAGATTTTCAACCAAGCCTTGCTGGCAAAACAATGTTGGAGAATTGTCCAGGATCCATCTTCCCTTCTGGCGCGTGTTCTGAAGGGCAAATATTACCCTTTCGTTGATTTCTTGAGGGCAGAGGGGAGAGAGCTTTTAGAGAGGGACTTGCGGTGGCGGATTGGGAATGGGGAAGGTGTGCCTGTATATGGAGCGAAGTGGCTTCCTGATGATGGAGATCTTAGAGTGCGGTCACCGGTAACATTGGCGCCTGAGACTCGGGTCGCAAATCTGATGACGGCAACTGGGCAGTGGAACGAAGGGCTCATCCGGCAGCACTTTAGCCCCCACGAGGTCAGCCTAATTTTATCTATTCCGGTGCGGGCTGGAGTGGAGGATAAAGTTGTTTGGCATTATGAGAAGTCGGGCCTCTTTTCGGTGAAAAACGGATACCGGTTAGGACAATCAACTTGGCTTGCGCAGTTCCCGTCATCTTCTTCAAACGAGTCGTGGGCGGCGAGTTATGTCTCGTCGTTCCAGCAGACGGCCTTATCCTGTGGAGTAGAGGTGCTAAGTGACCTTGCAAGGGAAAATGTGAGATGGAGCCCCCCAGAGGATGTGTTGTATAAGGTGAACGTAGATGCGTTCTTTAGAAGGGAGCGATGGCAGGCGGGTTTAGGTGTGGTGGTTCGGGATTCTTTTGGACAGGTTATGTTGTCGGCAACATTGGTGCAGTGGCATGTGCGGTGTCCGGAGATGGCCGAAGGTTGGGATGCGGTAAAGGGGATGAGACTAGCATTGGAGATGGGCCTGTTCCCATTGGTGTTGGAGACCGATTCCAATCGAGTGGCTGGCATTTTCCAGGATGAGGCAGGGGATGATTTTTCGGATGTGGGTGCACTTGTGGCTGATTTACGAAAGGACGTACCAGGTTCTTCCTTTCTCAGCTGCATGTTCACTCGAAGAGAGAGGAATGGGGTGGCACACCAGTTGGCTTGTCTGGCAAGGAGGGACGAAGAATCTAGGGTGTGGGTTGAGTCTGTGCCCCAGTGTGTTGAGGCTTTGGTCCTTTTTGATATGGCATTGTTGTGA

Coding sequence (CDS)

ATGGATACAATGGATATGCGTTTGGCGTTCCCGTGTTATTCGATGAATTGCTTCCGGTTACCAAAGAAGTTGTTTTGGTGGGGTGGGGAGAAGGTGGATCGAGGAATCCATTGGGTGAGTTGGAAATCCCTATGTAAGCCTAAGTGCTATGGTGGGATGGGCTTCAGGGACCTGGAGATTTTCAACCAAGCCTTGCTGGCAAAACAATGTTGGAGAATTGTCCAGGATCCATCTTCCCTTCTGGCGCGTGTTCTGAAGGGCAAATATTACCCTTTCGTTGATTTCTTGAGGGCAGAGGGGAGAGAGCTTTTAGAGAGGGACTTGCGGTGGCGGATTGGGAATGGGGAAGGTGTGCCTGTATATGGAGCGAAGTGGCTTCCTGATGATGGAGATCTTAGAGTGCGGTCACCGGTAACATTGGCGCCTGAGACTCGGGTCGCAAATCTGATGACGGCAACTGGGCAGTGGAACGAAGGGCTCATCCGGCAGCACTTTAGCCCCCACGAGGTCAGCCTAATTTTATCTATTCCGGTGCGGGCTGGAGTGGAGGATAAAGTTGTTTGGCATTATGAGAAGTCGGGCCTCTTTTCGGTGAAAAACGGATACCGGTTAGGACAATCAACTTGGCTTGCGCAGTTCCCGTCATCTTCTTCAAACGAGTCGTGGGCGGCGAGTTATGTCTCGTCGTTCCAGCAGACGGCCTTATCCTGTGGAGTAGAGGTGCTAAGTGACCTTGCAAGGGAAAATGTGAGATGGAGCCCCCCAGAGGATGTGTTGTATAAGGTGAACGTAGATGCGTTCTTTAGAAGGGAGCGATGGCAGGCGGGTTTAGGTGTGGTGGTTCGGGATTCTTTTGGACAGGTTATGTTGTCGGCAACATTGGTGCAGTGGCATGTGCGGTGTCCGGAGATGGCCGAAGGTTGGGATGCGGTAAAGGGGATGAGACTAGCATTGGAGATGGGCCTGTTCCCATTGGTGTTGGAGACCGATTCCAATCGAGTGGCTGGCATTTTCCAGGATGAGGCAGGGGATGATTTTTCGGATGTGGGTGCACTTGTGGCTGATTTACGAAAGGACGTACCAGGTTCTTCCTTTCTCAGCTGCATGTTCACTCGAAGAGAGAGGAATGGGGTGGCACACCAGTTGGCTTGTCTGGCAAGGAGGGACGAAGAATCTAGGGTGTGGGTTGAGTCTGTGCCCCAGTGTGTTGAGGCTTTGGTCCTTTTTGATATGGCATTGTTGTGA

Protein sequence

MDTMDMRLAFPCYSMNCFRLPKKLFWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDLEIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAEGRELLERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPVTLAPETRVANLMTATGQWNEGLIRQHFSPHEVSLILSIPVRAGVEDKVVWHYEKSGLFSVKNGYRLGQSTWLAQFPSSSSNESWAASYVSSFQQTALSCGVEVLSDLARENVRWSPPEDVLYKVNVDAFFRRERWQAGLGVVVRDSFGQVMLSATLVQWHVRCPEMAEGWDAVKGMRLALEMGLFPLVLETDSNRVAGIFQDEAGDDFSDVGALVADLRKDVPGSSFLSCMFTRRERNGVAHQLACLARRDEESRVWVESVPQCVEALVLFDMALL

Homology

[Close]

BLAST of Lcy01g005920 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 5.3e-24
Identity = 61/150 (40.67%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 8   LAFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPK-CYGGMGFR 67
           +A P Y+M+CFRL K L          FWW   +  R I WV+W+ LCK K   GG+GFR
Sbjct: 1   MALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 60

Query: 68  DLEIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRA--------------EGRE 127
           DL  FNQALLAKQ +RI+  P +LL+R+L+ +Y+P    +                 GRE
Sbjct: 61  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRE 120

Query: 128 LLERDLRWRIGNGEGVPVYGAKWLPDDGDL 133
           LL R L   IG+G    V+  +W+ D+  L
Sbjct: 121 LLSRGLLRTIGDGIHTKVWLDRWIMDETPL 150

[Close]

BLAST of Lcy01g005920 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 5.0e-14
Identity = 62/239 (25.94%), Postives = 102/239 (42.68%), Query Frame = 0


Query: 9   AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
           + P +SM+   LP+ +          F WG     +  H V W  +C PK  GG+G R  
Sbjct: 47  SMPVHSMSTILLPQSILNRLDQLSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAA 106

Query: 69  EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAEGRELLERDLRWRIGNG--- 128
           +  N+AL++K  WR++Q+ +SL   VL+ KY+           E+  RD RW I  G   
Sbjct: 107 KSMNRALISKVGWRLLQEKNSLWTLVLQKKYHV---------GEI--RDSRWLIPKGSWS 166

Query: 129 ----------EGVPVYGAKWLPDDG-------DLRVRSPVTLA---------PETRVANL 188
                       V  +G  W+P DG       D  V     L           +T VA  
Sbjct: 167 STWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLELDNGERPTDCDTVVAKD 226

Query: 189 MTATGQ-WNEGLIRQHFSPH---EVSLILSIPVRAGVEDKVVWHYEKSGLFSVKNGYRL 205
           +   G+ W+   I  + + +   E+  ++ + +  G  D++ W + + G FSV++ Y +
Sbjct: 227 LWIPGRGWDFAKIDPYTTNNTRLELRAVV-LDLVTGARDRLSWKFSQDGQFSVRSAYEM 273

[Close]

BLAST of Lcy01g005920 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 1.1e-67
Identity = 172/564 (30.50%), Postives = 253/564 (44.86%), Query Frame = 0


Query: 9    AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
            A PCY+M+CFRLPK+L          FWWG  K D+ IHWV+W SL  PKC GGMGFRDL
Sbjct: 592  AIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRDL 651

Query: 69   EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAE--------------GRELL 128
            E+FN+ALLAKQCWRI+  P+S+L+RVLKG+Y+    F+ A+              GR+LL
Sbjct: 652  ELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLL 711

Query: 129  ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPVTLAPETRVANLMT-ATGQWNEGLIRQ 188
            ++ LRWRIGNG+ V +YG  W+P+   L++ S   L   +RV++L+    G W   ++R 
Sbjct: 712  KKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRD 771

Query: 189  HFSPHEVSLILSIPV-RAGVEDKVVWHYEKSGLFSVKNGYRLG-QSTWLAQFPSSSSNES 248
             F+P E   ILSIP+ R   ED+++W+YEK+G++SV++GY++   +    Q PSSSS+E 
Sbjct: 772  EFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEE 831

Query: 249  ------------------------------------------------------------ 308
                                                                        
Sbjct: 832  VRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLF 891

Query: 309  WAASYVSSF-------------------------------------------------QQ 368
            W   +  +                                                   +
Sbjct: 892  WICKFAEALWINSKFGKLSPFLILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTK 951

Query: 369  TALSCGVEVL---SDLARE-----------------NVRWSPPEDVLYKVNVDAFFRRER 408
            T    G+E++   +  A E                  + W PP++ +YK+N DA F    
Sbjct: 952  TVFKIGMELVEWANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDASFLASD 1011

[Close]

BLAST of Lcy01g005920 vs. ExPASy TrEMBL
Match: A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.4e-58
Identity = 165/557 (29.62%), Postives = 232/557 (41.65%), Query Frame = 0


Query: 9    AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
            A P YSM+CFR+PK L          FWW   K  RGIHWV W+ LCK K  GG+GFRDL
Sbjct: 731  AIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDL 790

Query: 69   EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAE--------------GRELL 128
            E FNQALLAKQCWRI++ P SL+AR+ + +Y+P V FL AE              G+ELL
Sbjct: 791  EAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELL 850

Query: 129  ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPVTLAPETRVANLMTATGQWNEGLIRQH 188
             + LRWR+GNG  + VY  KWLP     ++ SP  L   T V +L T++GQWN  L++  
Sbjct: 851  NKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDI 910

Query: 189  FSPHEVSLILSIPVRA-GVEDKVVWHYEKSGLFSVKNGYRLG------------------ 248
            F   EV   L IP+ +    D ++WHYE++G++SVK+GYRL                   
Sbjct: 911  FWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRLACLEKDKMSGEPSVRVDLN 970

Query: 249  ----QSTWLAQFPS---------------------------------------------- 308
                +  W  + P+                                              
Sbjct: 971  SKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVW 1030

Query: 309  -----------------------SSSNESWAASYVSSF---------------------- 368
                                   +S  E W A  +SS                       
Sbjct: 1031 LCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFI 1090

Query: 369  ----QQTALSCGVEVLSDLARE-----NVR----------------WSPPEDVLYKVNVD 402
                 +TA    +  ++ LA+E     N+                 W PP   +YK+NVD
Sbjct: 1091 FEGKSETATQL-LHRMTKLAQEFSNANNLSHTIHGRQSSPQAPLHGWRPPPAGIYKINVD 1150

[Close]

BLAST of Lcy01g005920 vs. ExPASy TrEMBL
Match: M5W5F3 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026368mg PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-56
Identity = 108/221 (48.87%), Postives = 140/221 (63.35%), Query Frame = 0


Query: 9   AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
           A P YSM+CFR+PK L          FWW   K  RGIHWV W+ LCK K  GG+GFRDL
Sbjct: 502 AIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDL 561

Query: 69  EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAE--------------GRELL 128
           E FNQALLAKQCWRI++ P SL+AR+ + +Y+P V FL AE              G+ELL
Sbjct: 562 EAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELL 621

Query: 129 ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPVTLAPETRVANLMTATGQWNEGLIRQH 188
            + LRWR+G+G  + VY  KWLP     ++ SP  L   TRV +L T++GQWN  L++  
Sbjct: 622 NKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDI 681

Query: 189 FSPHEVSLILSIPVRA-GVEDKVVWHYEKSGLFSVKNGYRL 205
           F   EV  IL IP+ +    D ++WHYE++G++SVK+GYRL
Sbjct: 682 FWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRL 722

[Close]

BLAST of Lcy01g005920 vs. ExPASy TrEMBL
Match: A0A251NPF0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G123900 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 1.9e-56
Identity = 108/221 (48.87%), Postives = 140/221 (63.35%), Query Frame = 0


Query: 9   AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
           A P YSM+CFR+PK L          FWW   K  RGIHWV W+ LCK K  GG+GFRDL
Sbjct: 465 AIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDL 524

Query: 69  EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAE--------------GRELL 128
           E FNQALLAKQCWRI++ P SL+AR+ + +Y+P V FL AE              G+ELL
Sbjct: 525 EAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELL 584

Query: 129 ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPVTLAPETRVANLMTATGQWNEGLIRQH 188
            + LRWR+G+G  + VY  KWLP     ++ SP  L   TRV +L T++GQWN  L++  
Sbjct: 585 NKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDI 644

Query: 189 FSPHEVSLILSIPVRA-GVEDKVVWHYEKSGLFSVKNGYRL 205
           F   EV  IL IP+ +    D ++WHYE++G++SVK+GYRL
Sbjct: 645 FWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRL 685

[Close]

BLAST of Lcy01g005920 vs. ExPASy TrEMBL
Match: A0A6P9EU14 (uncharacterized protein LOC118349712 OS=Juglans regia OX=51240 GN=LOC118349712 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.4e-56
Identity = 153/475 (32.21%), Postives = 223/475 (46.95%), Query Frame = 0


Query: 9   AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
           A P Y+M+ F+LPK+L          FWW   + +RGIHW  W  L   K  GG+GFR+L
Sbjct: 229 AIPTYTMSIFQLPKRLCRDIEALMSKFWWSNCQKERGIHWKRWSWLGMAKAEGGLGFRNL 288

Query: 69  EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRA--------------EGRELL 128
           E FN+A+LAKQ WRI+++P SL+ARV K KY+  + FL A                  L+
Sbjct: 289 ESFNRAMLAKQGWRILKEPLSLVARVFKDKYFKNMQFLEAPLGRLPSLIWKSIWSAMGLV 348

Query: 129 ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPV-TLAPETRVANLM-TATGQWNEGLIR 188
           +  + WRIGNG+ V ++G KWLP      V+S +  L P  +V+ L+    G+W E ++ 
Sbjct: 349 KEGMLWRIGNGKSVNIWGQKWLPTQTTHCVQSEIKVLNPNAKVSELIEEQEGRWKEDVVA 408

Query: 189 QHFSPHEVSLILSIPV-RAGVEDKVVWHYEKSGLFSVKNGYRLGQSTWLAQFPSSSSNE- 248
             F+  E  +I +IPV R G  DK++W   K+G FSVK+ Y + Q  ++   PS    E 
Sbjct: 409 NIFNKEEAKVICAIPVSRFGSADKLIWGPSKNGKFSVKSAYFVEQKKYVESGPSHVKEEV 468

Query: 249 ------------------SWAA-------------SYVSSFQQTALSCG----VEVLSDL 308
                              W A              +VS      L+ G      V + +
Sbjct: 469 DIWKRIWSLDVPGVAKHFMWRAGIWHRRNKVVFENKFVSPGTVVQLAIGGLDEFHVANQI 528

Query: 309 ARENVR----------WSPPEDVLYKVNVDAFFRRERWQAGLGVVVRDSFGQVMLSATLV 368
              N +          W  P    +K N D     E  + G+G+VVRDS G+V+ S    
Sbjct: 529 KGVNQKHTAEGGRGENWKRPNGQWFKANFDGALNMEMQKMGMGIVVRDSKGEVIASLCGT 588

Query: 369 QWHVRCPEMAEGWDAVKGMRLALEMGLFPLVLETDSNRVAGIFQDEAGDDFSDVGALVAD 411
           +  V  P +AE     + M    E+GL  +++E D+  +      E  D+ S  G LV D
Sbjct: 589 KGSVTSPFIAELNALWRTMDFCSELGLQDVIIEGDAKELIDAINTETEDE-SWKGQLVED 648

[Close]

BLAST of Lcy01g005920 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 267.3 bits (682), Expect = 2.2e-67
Identity = 172/564 (30.50%), Postives = 253/564 (44.86%), Query Frame = 0


Query: 9    AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
            A PCY+M+CFRLPK+L          FWWG  K D+ IHWV+W SL  PKC GGMGFRDL
Sbjct: 592  AIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGGMGFRDL 651

Query: 69   EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAE--------------GRELL 128
            E+FN+ALLAKQCWRI+  P+S+L+RVLKG+Y+    F+ A+              GR+LL
Sbjct: 652  ELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSILWGRDLL 711

Query: 129  ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPVTLAPETRVANLMT-ATGQWNEGLIRQ 188
            ++ LRWRIGNG+ V +YG  W+P+   L++ S   L   +RV++L+    G W   ++R 
Sbjct: 712  KKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQGDVVRD 771

Query: 189  HFSPHEVSLILSIPV-RAGVEDKVVWHYEKSGLFSVKNGYRLG-QSTWLAQFPSSSSNES 248
             F+P E   ILSIP+ R   ED+++W+YEK+G++SV++GY++   +    Q PSSSS+E 
Sbjct: 772  EFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPSSSSSEE 831

Query: 249  ------------------------------------------------------------ 308
                                                                        
Sbjct: 832  VRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLF 891

Query: 309  WAASYVSSF-------------------------------------------------QQ 368
            W   +  +                                                   +
Sbjct: 892  WICKFAEALWINSKFGKLSPFLILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTK 951

Query: 369  TALSCGVEVL---SDLARE-----------------NVRWSPPEDVLYKVNVDAFFRRER 408
            T    G+E++   +  A E                  + W PP++ +YK+N DA F    
Sbjct: 952  TVFKIGMELVEWANKYAMEFREAKSNPITGRVTNTAEILWQPPDEGIYKINTDASFLASD 1011

[Close]

BLAST of Lcy01g005920 vs. NCBI nr
Match: VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])

HSP 1 Score: 235.7 bits (600), Expect = 7.0e-58
Identity = 165/557 (29.62%), Postives = 232/557 (41.65%), Query Frame = 0


Query: 9    AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
            A P YSM+CFR+PK L          FWW   K  RGIHWV W+ LCK K  GG+GFRDL
Sbjct: 731  AIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDL 790

Query: 69   EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAE--------------GRELL 128
            E FNQALLAKQCWRI++ P SL+AR+ + +Y+P V FL AE              G+ELL
Sbjct: 791  EAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELL 850

Query: 129  ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPVTLAPETRVANLMTATGQWNEGLIRQH 188
             + LRWR+GNG  + VY  KWLP     ++ SP  L   T V +L T++GQWN  L++  
Sbjct: 851  NKGLRWRVGNGVSIQVYTDKWLPAPSFFKIMSPPQLPLSTLVCDLFTSSGQWNVPLLKDI 910

Query: 189  FSPHEVSLILSIPVRA-GVEDKVVWHYEKSGLFSVKNGYRLG------------------ 248
            F   EV   L IP+ +    D ++WHYE++G++SVK+GYRL                   
Sbjct: 911  FWDQEVDAKLQIPLASLAGHDCLIWHYERNGMYSVKSGYRLACLEKDKMSGEPSVRVDLN 970

Query: 249  ----QSTWLAQFPS---------------------------------------------- 308
                +  W  + P+                                              
Sbjct: 971  SKFWKKIWALKIPNKIKFFLWRCAWDFLPCGQILFNRKIAPTPICPNCHRKAESVLHAVW 1030

Query: 309  -----------------------SSSNESWAASYVSSF---------------------- 368
                                   +S  E W A  +SS                       
Sbjct: 1031 LCETAKEVWRNSAWGNVCEEWRVNSFRELWHALQLSSSGEEQGLFAYLCWGLWNRRNSFI 1090

Query: 369  ----QQTALSCGVEVLSDLARE-----NVR----------------WSPPEDVLYKVNVD 402
                 +TA    +  ++ LA+E     N+                 W PP   +YK+NVD
Sbjct: 1091 FEGKSETATQL-LHRMTKLAQEFSNANNLSHTIHGRQSSPQAPLHGWRPPPAGIYKINVD 1150

[Close]

BLAST of Lcy01g005920 vs. NCBI nr
Match: CAB4262994.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 231.1 bits (588), Expect = 1.7e-56
Identity = 161/496 (32.46%), Postives = 224/496 (45.16%), Query Frame = 0


Query: 9    AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
            A P YSM+CFR+PK L          FWW   K  RGI WV W+ LCK K  GG+GFRDL
Sbjct: 1192 AIPTYSMSCFRIPKGLCKELNGIMAQFWWARVKDKRGIDWVKWEMLCKSKFAGGLGFRDL 1251

Query: 69   EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAE--------------GRELL 128
            E FNQALL KQC  I+Q P SL+AR+ + +Y+P   FL A               G+ELL
Sbjct: 1252 EAFNQALLTKQCQCIIQTPESLVARIFRARYHPSAPFLEAGVGTNPSFIWRSLQWGKELL 1311

Query: 129  ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPVTLAPETRVANLMTATGQWNEGLIRQH 188
             + LRWR+GNGE + VY  KWLP     ++ S   L   T V +L T++GQWN  L++  
Sbjct: 1312 NKGLRWRVGNGESIQVYTNKWLPVPSFFKIMSAPQLPLSTLVCDLFTSSGQWNVPLLKDI 1371

Query: 189  FSPHEVSLILSIP-VRAGVEDKVVWHYEKSGLFSVKNGYRL---------GQST------ 248
            F   EV  IL IP V     D ++WHYE++G++SVK+GY+L         G+S+      
Sbjct: 1372 FWDQEVEAILQIPLVSLASHDCLIWHYERNGMYSVKSGYQLTRLEKDIMCGESSAGVNLS 1431

Query: 249  -------WLAQFPS-------------------------SSSNESWAASYVSSFQQ---- 308
                   W  + P+                         +S  E W A  +SS  +    
Sbjct: 1432 SRFWKKIWALKIPNKIKFFLWRRCGATQLGGNVCEVSRVNSFRELWYAVQISSGGEEQGL 1491

Query: 309  -TALSCGV---------EVLSDLARENVR------------------------------- 368
               L  G+         E  S+ A + +                                
Sbjct: 1492 FAYLRWGLWNWRDSLIFEAKSETATQLLHRMHTLAQEFFDVNNSSHTSHGRQSSPQASLH 1551

Query: 369  -WSPPEDVLYKVNVDAFFRRERWQAGLGVVVRDSFGQVMLSAT-LVQWHVRCPEMAEGWD 384
             W PP   +YK+NVD   +      G+GVVVR+  G  M +    +Q      +M E   
Sbjct: 1552 VWRPPAVGIYKINVDRALKSGDSIRGVGVVVRNENGDFMAACVRRIQASYGARQM-ELMA 1611

[Close]

BLAST of Lcy01g005920 vs. NCBI nr
Match: ONI01138.1 (hypothetical protein PRUPE_6G123900 [Prunus persica])

HSP 1 Score: 229.9 bits (585), Expect = 3.9e-56
Identity = 108/221 (48.87%), Postives = 140/221 (63.35%), Query Frame = 0


Query: 9   AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
           A P YSM+CFR+PK L          FWW   K  RGIHWV W+ LCK K  GG+GFRDL
Sbjct: 465 AIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLGFRDL 524

Query: 69  EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRAE--------------GRELL 128
           E FNQALLAKQCWRI++ P SL+AR+ + +Y+P V FL AE              G+ELL
Sbjct: 525 EAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWGKELL 584

Query: 129 ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPVTLAPETRVANLMTATGQWNEGLIRQH 188
            + LRWR+G+G  + VY  KWLP     ++ SP  L   TRV +L T++GQWN  L++  
Sbjct: 585 NKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPLLKDI 644

Query: 189 FSPHEVSLILSIPVRA-GVEDKVVWHYEKSGLFSVKNGYRL 205
           F   EV  IL IP+ +    D ++WHYE++G++SVK+GYRL
Sbjct: 645 FWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRL 685

[Close]

BLAST of Lcy01g005920 vs. NCBI nr
Match: XP_035551149.1 (uncharacterized protein LOC118349712 [Juglans regia])

HSP 1 Score: 229.6 bits (584), Expect = 5.0e-56
Identity = 153/475 (32.21%), Postives = 223/475 (46.95%), Query Frame = 0


Query: 9   AFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRDL 68
           A P Y+M+ F+LPK+L          FWW   + +RGIHW  W  L   K  GG+GFR+L
Sbjct: 229 AIPTYTMSIFQLPKRLCRDIEALMSKFWWSNCQKERGIHWKRWSWLGMAKAEGGLGFRNL 288

Query: 69  EIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRA--------------EGRELL 128
           E FN+A+LAKQ WRI+++P SL+ARV K KY+  + FL A                  L+
Sbjct: 289 ESFNRAMLAKQGWRILKEPLSLVARVFKDKYFKNMQFLEAPLGRLPSLIWKSIWSAMGLV 348

Query: 129 ERDLRWRIGNGEGVPVYGAKWLPDDGDLRVRSPV-TLAPETRVANLM-TATGQWNEGLIR 188
           +  + WRIGNG+ V ++G KWLP      V+S +  L P  +V+ L+    G+W E ++ 
Sbjct: 349 KEGMLWRIGNGKSVNIWGQKWLPTQTTHCVQSEIKVLNPNAKVSELIEEQEGRWKEDVVA 408

Query: 189 QHFSPHEVSLILSIPV-RAGVEDKVVWHYEKSGLFSVKNGYRLGQSTWLAQFPSSSSNE- 248
             F+  E  +I +IPV R G  DK++W   K+G FSVK+ Y + Q  ++   PS    E 
Sbjct: 409 NIFNKEEAKVICAIPVSRFGSADKLIWGPSKNGKFSVKSAYFVEQKKYVESGPSHVKEEV 468

Query: 249 ------------------SWAA-------------SYVSSFQQTALSCG----VEVLSDL 308
                              W A              +VS      L+ G      V + +
Sbjct: 469 DIWKRIWSLDVPGVAKHFMWRAGIWHRRNKVVFENKFVSPGTVVQLAIGGLDEFHVANQI 528

Query: 309 ARENVR----------WSPPEDVLYKVNVDAFFRRERWQAGLGVVVRDSFGQVMLSATLV 368
              N +          W  P    +K N D     E  + G+G+VVRDS G+V+ S    
Sbjct: 529 KGVNQKHTAEGGRGENWKRPNGQWFKANFDGALNMEMQKMGMGIVVRDSKGEVIASLCGT 588

Query: 369 QWHVRCPEMAEGWDAVKGMRLALEMGLFPLVLETDSNRVAGIFQDEAGDDFSDVGALVAD 411
           +  V  P +AE     + M    E+GL  +++E D+  +      E  D+ S  G LV D
Sbjct: 589 KGSVTSPFIAELNALWRTMDFCSELGLQDVIIEGDAKELIDAINTETEDE-SWKGQLVED 648

[Close]

BLAST of Lcy01g005920 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 6.0e-31
Identity = 77/229 (33.62%), Postives = 118/229 (51.53%), Query Frame = 0


Query: 8   LAFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPKCYGGMGFRD 67
           +A P Y+M CF LPK +          FWW  ++  +G+HW +W  L   K  GG+GF+D
Sbjct: 1   MALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKD 60

Query: 68  LEIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRA--------------EGREL 127
           +E FN ALL KQ WR++  P SL+A+V K +Y+   D L A                +E+
Sbjct: 61  IEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEI 120

Query: 128 LERDLRWRIGNGEGVPVYGAKWL---PDDGDLRV-RSP----VTLAPETRVANLMTATG- 187
           L +  R  +GNGE + ++  KWL   P    LR+ R P     +++   +V++L+  +G 
Sbjct: 121 LRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGR 180

Query: 188 QWNEGLIRQHFSPHEVSLILSI-PVRAGVEDKVVWHYEKSGLFSVKNGY 203
           +W + +I   F   E  LI  + P    + D   W Y  SG ++VK+GY
Sbjct: 181 EWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGY 229

[Close]

BLAST of Lcy01g005920 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 113.6 bits (283), Expect = 3.8e-25
Identity = 61/150 (40.67%), Postives = 82/150 (54.67%), Query Frame = 0


Query: 8   LAFPCYSMNCFRLPKKL----------FWWGGEKVDRGIHWVSWKSLCKPK-CYGGMGFR 67
           +A P Y+M+CFRL K L          FWW   +  R I WV+W+ LCK K   GG+GFR
Sbjct: 1   MALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 60

Query: 68  DLEIFNQALLAKQCWRIVQDPSSLLARVLKGKYYPFVDFLRA--------------EGRE 127
           DL  FNQALLAKQ +RI+  P +LL+R+L+ +Y+P    +                 GRE
Sbjct: 61  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRE 120

Query: 128 LLERDLRWRIGNGEGVPVYGAKWLPDDGDL 133
           LL R L   IG+G    V+  +W+ D+  L
Sbjct: 121 LLSRGLLRTIGDGIHTKVWLDRWIMDETPL 150

[Close]

BLAST of Lcy01g005920 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-07
Identity = 35/137 (25.55%), Postives = 62/137 (45.26%), Query Frame = 0


Query: 247 RENVRWSPPEDVLYKVNVDAFFRRERWQAGLGVVVRDSFGQVMLSATLVQWHVRCPEMAE 306
           R++ +W+PP +   K N D+ + +       G  +R+  G ++L          C   AE
Sbjct: 201 RDSSQWNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCSLHAE 260

Query: 307 GWDAVKGMRLALEMGLFPLVLETDSNRVAGIFQDEAGDDFSDVGALVADLRKDVPGSSFL 366
               +  +++    GL  +  E+DS  +  +  +  G+D S +G L+ D+R  +    + 
Sbjct: 261 ALGFLHALQVIWAHGLRYVWFESDSKSLVTLINN--GEDHSLLGTLIYDIRHWMLKLPYC 320

Query: 367 SCMFTRRERNGVAHQLA 384
           S  F  RERN  A  LA
Sbjct: 321 SLEFVNRERNSAADALA 335

The following BLAST results are available for this feature:

BLAST of Lcy01g005920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93295	5.3e-24	40.67	Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ...	[more]
P0C2F6	5.0e-14	25.94	Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]

BLAST of Lcy01g005920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DAR4	1.1e-67	30.50	uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5E4FZN9	3.4e-58	29.62	PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1	[more]
M5W5F3	1.9e-56	48.87	Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=...	[more]
A0A251NPF0	1.9e-56	48.87	Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU...	[more]
A0A6P9EU14	2.4e-56	32.21	uncharacterized protein LOC118349712 OS=Juglans regia OX=51240 GN=LOC118349712 P...	[more]

BLAST of Lcy01g005920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150918.1	2.2e-67	30.50	uncharacterized protein LOC111018954 [Momordica charantia]	[more]
VVA32947.1	7.0e-58	29.62	PREDICTED: retrotransposon [Prunus dulcis]	[more]
CAB4262994.1	1.7e-56	32.46	unnamed protein product [Prunus armeniaca]	[more]
ONI01138.1	3.9e-56	48.87	hypothetical protein PRUPE_6G123900 [Prunus persica]	[more]
XP_035551149.1	5.0e-56	32.21	uncharacterized protein LOC118349712 [Juglans regia]	[more]

BLAST of Lcy01g005920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29090.1	6.0e-31	33.62	Ribonuclease H-like superfamily protein	[more]
ATMG00310.1	3.8e-25	40.67	RNA-directed DNA polymerase (reverse transcriptase)-related family protein	[more]
AT2G02650.1	1.2e-07	25.55	Ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 263..384 e-value: 6.1E-16 score: 58.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 260..387 e-value: 3.0E-5 score: 26.0
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 9..212
None	No IPR available	PANTHER	PTHR33116:SF41	SUBFAMILY NOT NAMED	coord: 9..212
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 262..383 e-value: 8.38226E-12 score: 60.0204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g005920.1	Lcy01g005920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity