Lcy01g005080 (gene) Sponge gourd (P93075) v1

Overview
NameLcy01g005080
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
LocationChr01: 6989357 .. 6993350 (-)
RNA-Seq ExpressionLcy01g005080
SyntenyLcy01g005080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGTTCTTGGGTCAAACAAGAAGTTGGATAGAGTTGTATGCTAGGAATGATCTAGATTAACTCCACCCAATTCGTACTTCACAACTCCTTGGACCAAACACGATTCTAACATTGATTTGAACTAGGGACTTGACCTAGTAAATCAAAATTAGGGTAGTATTTAGAAATGTTACCAAGCCAGGAGGGGTCACAAATGCAAATAGACGAAAGTTATGTCCTAAACAGAAAAAGGAAAAACAAAAAAGGATTTGGGACTAAACGGAACAAAGTGTAGACTCCGGGACGGAGAAAAGGGCCGAGAAAAATGGCGGCGAGACAGAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTTAAGAAAGATCGCCGGAGGCCCGGTCTCAGCCAGCCTCTACCGTCGTTGAGACGCGCATTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGTTTTCAACGGTACGACCCTAACTTCTCGTTTTTGTCTTTTGCATCGATTTGATATCGTTGTTTCTTTCGTGTGGGGATTCTAGGTATACTGAGACGGGATTCACTGTGAACGGAGCGGATTATGAGGGGAGCTTGCTCTGCGTTGGGAATTTGTTGATGTCTTGGAGTCCCAAGAAGTTTTCGGAGATTACGCCTGAGAGGTTTGCTTTGCATTTCTTCTTCTTTAACTTATGATACTTTTATGTTCTTTTTTCCCTCTGGTGATTTGAATGTATTTCTTTTGGCAGTTTATCTATCTTCCAGATTGTGCGACCTATTCCAGGTAAAATCTCGTGTTGTGTTTGACAAAGGGATTGAATTATTGGACAATGTTGAAGTAATTTAAATTTGGATATCTGGAGTGACCTAGATTGACGTTTATATTGAAATGTTTTCTCTTGAGGTATTTTTCTCGAGTTTACATTGCTTGGTTCTTATTCTTTTGTTGTCTTTGGACGGGCAAGGTCCTTTCTTGGCTTGGTTCTTCTGTGCTTGGGTACGAGGGTGGCATTGTCATTTGTGTATTTAAAGTCTCCTGTTGCTGCAACCAATGTTAATTTCGCAGTTTAAGGAATTGGATTTTGTAGAATTTGAAGCATGTACTAAGTTGAAAATGTAGTTGAAGCTTAAGTTCTTAAACAGGAAGATGATAAGGGTTTCTTTTTTCTCCTCTCTTTCTCTCTTTTTTCCTTCTTTACATTGTGAATCTGATAAGGAAGTCTACCCTCCATATATTTTGATTACGCTAGAACTAAAAGAGGAAAAGGGAGCACATGAGATAGCTGCATCAGCTAGCTAATACAGTTAGCTCAACTGGATCAGTTAGCCGATATTACTGTTATGCTAAAGAGTTAGCTGGAAGAAGCTTGTATTCTATTAGAGGGGAGATGGGAGAATTAATCAAGAAATTGTAAATTTGTTATAGACAAAGGGTAGGAATAACTTAATAAGGGTGGGGGTGACATCTGAATCCTTGAATATCAGGAAGGTTTGCACTTCTCAGCTATTGAATGGAAGACCCGAGGTAATACATATCCCCTCAACCGAAAGGTCAAAAGTTCGAATCTCCCGAATCACACATGTTGAACTAAAAGGGAAAGAAAAAAAGAAAAAAAAGAAGAAGTTAGCTATCTTGAGGATAACACGTATGTGGTGTACTTTTCTGTTAGTACTGTTGATGTCTTCCTTTCTTAGGCATTCTAGAATCTGAAAAGAGAGATTAGCTCACTTTAAGGTTGTGTGCATAAGCTGGCCAGCAAACCAAATGTTCTATTTATTTTTCAACTCTGCCGTCATCATCTTAGTGACATCTACTGTCCATATGTTGCTCTGTGTAAGAAAATTTTTATTGATTTCCACTGCCAGCTGATTACTTTTCTTTATTTGAAAGCTAGTTTATTTTCTCTCTCTAATTTCAGAAATTCTAATACTTGGCTGTGGGAGATATACTGAACCAGTAAATCCAGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAGGCTGTAGACACGGTACTTATGGTTTGAAATTATATTGGTTTGTTTCATAATTGGATATGTCTTGATCTATATTATCCGATAACTGAGATTATTATTTTTCATGCAACTGAAAATCAAGATATTGAGCTATTTATGAGTCTGTCATTGATTGGTGGGAAAGCAATATATTCCTTTTTTAGGATAAGAAACAGTATTTCATACCATTAACTAAAAAGAGGTGGGAAAGCTCCACCAACCCTAGTGGCCTAGTCAAAAGAGATTGTAGGAAGGTTACTGTATTGTCAGGTTAGTGATAAGCAAAATAAATGTGTCGTCAATAATCTGCTCTTTTCCTTACATTCACTTGATCAGATTGTGTTCTAACTTCTAAAGCCTTTTAGCTGTCTAGGATATTAAAAATCCACGAGTTCCTTGGAATATCAACTACTGCAGGGTAGTTTTTTTGTGCTTGTTTCGGACTTGTTGGAAATAGAGTGATCTGAATCATAGGTGATATTTGGGAACTTAGTTAAGTTCAAGAACTATCTTTAGAACCCAGATCAGATTTTGGACCTACGTTTGTTCAAGAAAGAAACTAAGTGGGTTGCAGTTGAGTTAAATTACCAATTATGAGCATCATACGGGAACTTATTGTTTTGAACTGTCGGCTGATGTAGAAACCTCTCCTCCTACTTTGAATGTTATCTTATTAGGAAAATGGGAATTAAGTTCACAAGTCTCTTTTATGTCATTGCACGTTGCTATTGTTTTGAGTTTTGACCATCTCAAATAAACTAATTTAAATCTAATTAGATTTTGTCATGGTGGTGAATTAGTTGGTTGTGTCACTGTAGATCAAGTGGTTATGTGCACTCTCTCTTTCTCGCCAGGAGATTCTCAATGGAAGGAAAATCTTGAATTACTTGATTTGCAGATATTAGTAGAGAAATTCCTTGAAAGAGAGAGACCGCCATGTCCAGCAATGATTGTCATATGAATTTTCTGTAGGAAGCTAATCCATATTTATATGAATAATGAGGGTAATTCAGATATAGGAATGAAATATGAGCTCTTATGGCTAAATGGGATCCTCTTTTTGCACATCTCGTTTTGGTAATGATGAAGATACATGCCAAAGACAAAGACACAAGCCGCAAGCGTGGTGTTACTGCTCACTATACTAATGAACTTTTGTTATTTGCAGAGAAATGCGGCATCAACATATAATATCCTAAACGAGGAAGGTAGAATTGTAGCTGCAGCACTTCTGCCTTACGGAGTTTCTTCATGACCGCTCAAAGCCAGACAAAGCCATTCTTACGGACGCCTCTCAATTGCAGGATTCTTCTAGCCCTCAAATCTTACAAGTATTCCCAACTGCTTTGTTCTCAAGTCATTTGTAGAATGACTGCAAGTACTAATCACTTGTTCTTTTTGCTGTATATACTGTTATGGTCAAAACCTGCATAAAGAATTTTGGCAATAAGTATACACTATTTATTTCCTGATCATCTAATCTTGGAAACTCGCTCTTTCAAATGGATTCCTTCCTATTAGTTACATCTCTCAATTTTCAAGCTCTTCTTAGTGGTTGTAGGAGAGCTTTAATGCAGAAGGTAGGCCAGAGTTCATCTTTCTACCAAGAACTAAAGAAGATCAAAGAAGAGTTAGAACCTGAAGGAAAATATCCAGGTGCAAAAATGGGGGTGGGGCCCTTGATAGCTTTAGTTTAGAGGCAATCATACATGAAGAGGAAATTTAGCATAGAAATTTCTTCAGTCATCACAGAGAAAAAAGAGGAGCTTTGTACAATGAAAAAGGACTTCAACCATGAGAGACAATTGGAGAGTAGATCCTCCAAGTGGTGGCCCTAGTGTTTTGAGATTTGAGATTTGAGATTTGAGATGATGTTTGGTATCTTTCAAAATCATCAGTTCAAACTCGTAGGTGGAAATTTTAAGAAATTACAACTTTTGTTGTCTCTTCGTACGATTTAG

mRNA sequence

TATGTTCTTGGGTCAAACAAGAAGTTGGATAGAGTTGTATGCTAGGAATGATCTAGATTAACTCCACCCAATTCGTACTTCACAACTCCTTGGACCAAACACGATTCTAACATTGATTTGAACTAGGGACTTGACCTAGTAAATCAAAATTAGGGTAGTATTTAGAAATGTTACCAAGCCAGGAGGGGTCACAAATGCAAATAGACGAAAGTTATGTCCTAAACAGAAAAAGGAAAAACAAAAAAGGATTTGGGACTAAACGGAACAAAGTGTAGACTCCGGGACGGAGAAAAGGGCCGAGAAAAATGGCGGCGAGACAGAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTTAAGAAAGATCGCCGGAGGCCCGGTCTCAGCCAGCCTCTACCGTCGTTGAGACGCGCATTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGTTTTCAACGGTATACTGAGACGGGATTCACTGTGAACGGAGCGGATTATGAGGGGAGCTTGCTCTGCGTTGGGAATTTGTTGATGTCTTGGAGTCCCAAGAAGTTTTCGGAGATTACGCCTGAGAGTTTATCTATCTTCCAGATTGTGCGACCTATTCCAGAAATTCTAATACTTGGCTGTGGGAGATATACTGAACCAGTAAATCCAGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAGGCTGTAGACACGAGAAATGCGGCATCAACATATAATATCCTAAACGAGGAAGGTAGAATTGTAGCTGCAGCACTTCTGCCTTACGGAGTTTCTTCATGACCGCTCAAAGCCAGACAAAGCCATTCTTACGGACGCCTCTCAATTGCAGGATTCTTCTAGCCCTCAAATCTTACAAGTATTCCCAACTGCTTTGTTCTCAAGTCATTTGTAGAATGACTGCAAGTACTAATCACTTGTTCTTTTTGCTGTATATACTGTTATGGTCAAAACCTGCATAAAGAATTTTGGCAATAAGTATACACTATTTATTTCCTGATCATCTAATCTTGGAAACTCGCTCTTTCAAATGGATTCCTTCCTATTAGTTACATCTCTCAATTTTCAAGCTCTTCTTAGTGGTTGTAGGAGAGCTTTAATGCAGAAGGTAGGCCAGAGTTCATCTTTCTACCAAGAACTAAAGAAGATCAAAGAAGAGTTAGAACCTGAAGGAAAATATCCAGGTGCAAAAATGGGGGTGGGGCCCTTGATAGCTTTAGTTTAGAGGCAATCATACATGAAGAGGAAATTTAGCATAGAAATTTCTTCAGTCATCACAGAGAAAAAAGAGGAGCTTTGTACAATGAAAAAGGACTTCAACCATGAGAGACAATTGGAGAGTAGATCCTCCAAGTGGTGGCCCTAGTGTTTTGAGATTTGAGATTTGAGATTTGAGATGATGTTTGGTATCTTTCAAAATCATCAGTTCAAACTCGTAGGTGGAAATTTTAAGAAATTACAACTTTTGTTGTCTCTTCGTACGATTTAG

Coding sequence (CDS)

ATGGCGGCGAGACAGAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCCTTAAGAAAGATCGCCGGAGGCCCGGTCTCAGCCAGCCTCTACCGTCGTTGAGACGCGCATTTTCACTTTACGATCAGATCAATCTCATCGACAATGTCCCCGAAGATCAGCTTCGTTTTCAACGGTATACTGAGACGGGATTCACTGTGAACGGAGCGGATTATGAGGGGAGCTTGCTCTGCGTTGGGAATTTGTTGATGTCTTGGAGTCCCAAGAAGTTTTCGGAGATTACGCCTGAGAGTTTATCTATCTTCCAGATTGTGCGACCTATTCCAGAAATTCTAATACTTGGCTGTGGGAGATATACTGAACCAGTAAATCCAGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAGGCTGTAGACACGAGAAATGCGGCATCAACATATAATATCCTAAACGAGGAAGGTAGAATTGTAGCTGCAGCACTTCTGCCTTACGGAGTTTCTTCATGA

Protein sequence

MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Homology
[Close]
BLAST of Lcy01g005080 vs. ExPASy Swiss-Prot
Match: O08776 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus norvegicus OX=10116 GN=Ndufaf3 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-16
Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQRYTETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIF 102
           +I+L+ N     +    Y   GFT+NG    G    +   ++ W+     +IT ES SIF
Sbjct: 47  RISLLQNEFPQAVYIDSYNSRGFTINGNRVFGPCALLPQTVVQWNVGSHQDITEESFSIF 106

Query: 103 QIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAA 162
            ++ P  EI+++G G  TE ++ ++ Q +R  G+ +E  DT NA +T+N L  EGR+  A
Sbjct: 107 WMLEPRIEIVVVGTGNKTERLHSQVLQAMRQRGIAVEIQDTPNACATFNFLCHEGRVTGA 166

Query: 163 ALLP 167
           AL+P
Sbjct: 167 ALIP 170

[Close]
BLAST of Lcy01g005080 vs. ExPASy Swiss-Prot
Match: Q6DFN1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.9e-16
Identity = 40/109 (36.70%), Postives = 64/109 (58.72%), Query Frame = 0 

Query: 58  QRYTETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCG 117
           + Y+  GF +NG    G    +   ++ W+   + +I  ESLS+F ++ P  EIL++G G
Sbjct: 66  ETYSSQGFIINGDKVVGPCAVIPKAILQWNVGSYKDINLESLSLFHMLSPRIEILVVGTG 125

Query: 118 RYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP 167
              E ++P + +F+R  G+ +E  DT NA +T+N L  E RI AAAL+P
Sbjct: 126 DRVERLDPNILKFMRQKGVAVEVQDTANACATFNFLVSERRITAAALIP 174

[Close]
BLAST of Lcy01g005080 vs. ExPASy Swiss-Prot
Match: Q9JKL4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musculus OX=10090 GN=Ndufaf3 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.4e-16
Identity = 41/124 (33.06%), Postives = 71/124 (57.26%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQRYTETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIF 102
           +I+L+ +     +    Y+  GFT+ G    G  + +   ++ W+     +IT ES S+F
Sbjct: 47  RISLLQSEFPQAVYIDSYSSRGFTICGNRVFGPCVLLPQTVVQWNVGSHQDITEESFSLF 106

Query: 103 QIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAA 162
            ++ P  EI+++G G  TE ++P++ Q +R  G+ +E  DT NA +T+N L  EGR+  A
Sbjct: 107 WMLEPRIEIVVVGTGNKTERLHPQVLQAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGA 166

Query: 163 ALLP 167
           AL+P
Sbjct: 167 ALIP 170

[Close]
BLAST of Lcy01g005080 vs. ExPASy Swiss-Prot
Match: Q2HJI2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taurus OX=9913 GN=NDUFAF3 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.9e-15
Identity = 41/124 (33.06%), Postives = 68/124 (54.84%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQRYTETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIF 102
           +I+L+       +    Y+  GF VNG    G    +   ++ W+   + +IT ES S+F
Sbjct: 46  RISLLQRESPLAMYIDSYSSRGFVVNGNRVFGPCALLPQSVVQWNVGSYQDITEESFSLF 105

Query: 103 QIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAA 162
            ++ P  EI+++G G  TE + P + + +R  G+ +E  DT NA +T+N L  EGR+  A
Sbjct: 106 WMLEPRIEIVVVGTGDRTERLQPHVLRAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGA 165

Query: 163 ALLP 167
           AL+P
Sbjct: 166 ALIP 169

[Close]
BLAST of Lcy01g005080 vs. ExPASy Swiss-Prot
Match: A1L1F1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio rerio OX=7955 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.4e-15
Identity = 39/107 (36.45%), Postives = 65/107 (60.75%), Query Frame = 0 

Query: 60  YTETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRY 119
           Y+  GF +NG    G    +   ++ W+    S+I+ ESLS+F ++ P  E+L+LG G  
Sbjct: 62  YSPRGFNINGNTVFGPCAVLPPAILQWNVGSHSDISVESLSLFYLLEPQIEVLVLGTGAR 121

Query: 120 TEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP 167
           TE ++ E+ + ++  G+ +E  DT NA +T+N L+ E R+ AAAL+P
Sbjct: 122 TERLHAEVLEELKKRGIAVEVQDTPNACATFNFLSSEKRLAAAALIP 168

[Close]
BLAST of Lcy01g005080 vs. ExPASy TrEMBL
Match: A0A6J1HIQ3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita moschata OX=3662 GN=LOC111464400 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.2e-87
Identity = 163/171 (95.32%), Postives = 169/171 (98.83%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS++KDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120
           TETGFTVNG DYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQI+RPIPEIL+LGCGRY 
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           EPVNP+LRQFIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPQLRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Lcy01g005080 vs. ExPASy TrEMBL
Match: A0A5A7TES8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002470 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86
Identity = 162/171 (94.74%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLP+LIR+LK DRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRY
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120
           TETGFTVNG DYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQIVRPIPEIL+LGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYT 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Lcy01g005080 vs. ExPASy TrEMBL
Match: A0A1S3CB84 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo OX=3656 GN=LOC103498992 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.7e-86
Identity = 162/171 (94.74%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLP+LIR+LK DRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRY
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120
           TETGFTVNG DYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQIVRPIPEIL+LGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYT 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Lcy01g005080 vs. ExPASy TrEMBL
Match: A0A6J1KD25 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111494507 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.8e-85
Identity = 161/171 (94.15%), Postives = 167/171 (97.66%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS++KDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQWY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120
           TETGFTVNG DYEGSLLCVG+LLMSWSPKKFSEITPESLSIFQI+RPIPEIL+LGCGRY 
Sbjct: 61  TETGFTVNGLDYEGSLLCVGDLLMSWSPKKFSEITPESLSIFQIIRPIPEILVLGCGRYI 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           EPVNPELRQFIRSTGMKLEAVD+RNA STYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDSRNATSTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Lcy01g005080 vs. ExPASy TrEMBL
Match: A0A6J1DND7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022818 OS=Momordica charantia OX=3673 GN=LOC111022818 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 6.5e-80
Identity = 156/177 (88.14%), Postives = 163/177 (92.09%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRSL+KDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIF------QIVRPIPEILIL 120
           TETGFTVNG DYEGSLLCVGNLLMSWSP+KFSEIT ES  +F       ++  I EIL+L
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESXXLFLTWRLVYLLSLISEILLL 120

Query: 121 GCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           GCG+YTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 GCGKYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 177

[Close]
BLAST of Lcy01g005080 vs. NCBI nr
Match: XP_038906819.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida])

HSP 1 Score: 335.5 bits (859), Expect = 2.7e-88
Identity = 168/171 (98.25%), Postives = 169/171 (98.83%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRSL+ DRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120
           TETGFTVNG DYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Lcy01g005080 vs. NCBI nr
Match: XP_023513625.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita pepo subsp. pepo] >KAG6593730.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026069.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 330.9 bits (847), Expect = 6.6e-87
Identity = 164/171 (95.91%), Postives = 169/171 (98.83%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS++KDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120
           TETGFTVNG DYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQI+RPIPEIL+LGCGRY 
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           EPVNPELRQFIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Lcy01g005080 vs. NCBI nr
Match: XP_022964366.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita moschata])

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-86
Identity = 163/171 (95.32%), Postives = 169/171 (98.83%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS++KDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120
           TETGFTVNG DYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQI+RPIPEIL+LGCGRY 
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           EPVNP+LRQFIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPQLRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Lcy01g005080 vs. NCBI nr
Match: XP_008460070.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis melo] >KAA0039965.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 327.8 bits (839), Expect = 5.6e-86
Identity = 162/171 (94.74%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLP+LIR+LK DRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRY
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120
           TETGFTVNG DYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQIVRPIPEIL+LGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYT 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Lcy01g005080 vs. NCBI nr
Match: XP_031743290.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus])

HSP 1 Score: 327.4 bits (838), Expect = 7.3e-86
Identity = 163/171 (95.32%), Postives = 167/171 (97.66%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIR+LK DRR+PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120
           TETGFTVNG DYEGSLLCVGNLLMSW+PKKFSEIT +SLSIFQIVRPIPEILILGCGRYT
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQIVRPIPEILILGCGRYT 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
           EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Lcy01g005080 vs. TAIR 10
Match: AT3G60150.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 263.5 bits (672), Expect = 1.2e-70
Identity = 131/172 (76.16%), Postives = 151/172 (87.79%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKD-RRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQR 60
           MA RQKA+ATLP LI+S++ +  ++P L   LPSLRRAFSLYDQINLIDNVPEDQLRFQ 
Sbjct: 1   MAVRQKAMATLPKLIQSMRNEVTKQPSL--VLPSLRRAFSLYDQINLIDNVPEDQLRFQE 60

Query: 61  YTETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRY 120
           + ET FTVNG  YEGSLLCVGNLLMSWSP+ FS+IT +SLSIFQ VRPIPE+LI+GCGRY
Sbjct: 61  FDETSFTVNGVKYEGSLLCVGNLLMSWSPRYFSDITTDSLSIFQTVRPIPELLIVGCGRY 120

Query: 121 TEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
             P+NP++RQF++S GMKLE VD+RNAASTYNILNEEGRIVAAALLPYGV+S
Sbjct: 121 NHPLNPQVRQFVKSIGMKLETVDSRNAASTYNILNEEGRIVAAALLPYGVTS 170

[Close]
BLAST of Lcy01g005080 vs. TAIR 10
Match: AT2G44525.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 259.6 bits (662), Expect = 1.8e-69
Identity = 131/172 (76.16%), Postives = 149/172 (86.63%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSLKKDRRRPGLSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQR 60
           MA R K++ATLP LI+S++K+   P  S P LPSLRRAFSLYDQINLIDNVPEDQLRFQ 
Sbjct: 1   MAMRLKSMATLPKLIQSMRKE--VPKHSNPVLPSLRRAFSLYDQINLIDNVPEDQLRFQE 60

Query: 61  YTETGFTVNGADYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRY 120
           + +T FTVNG  YEGSLLCVGNLLMSWSP+KFSEIT +SLSIFQ VRPIPE+LI+GCGR 
Sbjct: 61  FNDTSFTVNGVKYEGSLLCVGNLLMSWSPRKFSEITTDSLSIFQTVRPIPELLIVGCGRD 120

Query: 121 TEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 172
             PV PE+RQF++S GMKLE VD+RNAASTYNILNEEGR+VAAALLPYGV+S
Sbjct: 121 IHPVTPEVRQFVKSLGMKLETVDSRNAASTYNILNEEGRVVAAALLPYGVTS 170

The following BLAST results are available for this feature:
BLAST of Lcy01g005080 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O087762.2e-1634.68NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus n... [more]
Q6DFN12.9e-1636.70NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus ... [more]
Q9JKL46.4e-1633.06NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musc... [more]
Q2HJI21.9e-1533.06NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taur... [more]
A1L1F12.4e-1536.45NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio re... [more]
BLAST of Lcy01g005080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HIQ37.2e-8795.32NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit... [more]
A0A5A7TES82.7e-8694.74NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ... [more]
A0A1S3CB842.7e-8694.74NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ... [more]
A0A6J1KD251.8e-8594.15NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit... [more]
A0A6J1DND76.5e-8088.14LOW QUALITY PROTEIN: uncharacterized protein LOC111022818 OS=Momordica charantia... [more]
BLAST of Lcy01g005080 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038906819.12.7e-8898.25NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benin... [more]
XP_023513625.16.6e-8795.91NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
XP_022964366.11.5e-8695.32NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
XP_008460070.15.6e-8694.74PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-... [more]
XP_031743290.17.3e-8695.32NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucum... [more]
BLAST of Lcy01g005080 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G60150.11.2e-7076.16Protein of unknown function (DUF498/DUF598) [more]
AT2G44525.11.8e-6976.16Protein of unknown function (DUF498/DUF598) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036748MTH938-like superfamilyGENE3D3.40.1230.10coord: 41..167
e-value: 1.0E-34
score: 120.8
IPR036748MTH938-like superfamilySUPERFAMILY64076MTH938-likecoord: 44..167
IPR007523NDUFAF3/Mth938 domain-containing proteinPFAMPF04430DUF498coord: 58..165
e-value: 3.4E-32
score: 110.8
IPR007523NDUFAF3/Mth938 domain-containing proteinPANTHERPTHR21192NUCLEAR PROTEIN E3-3coord: 1..171
NoneNo IPR availablePANTHERPTHR21192:SF4BNAC04G03830D PROTEINcoord: 1..171
IPR034095NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3CDDcd05125Mth938_2P1-likecoord: 60..168
e-value: 2.44671E-45
score: 143.109

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy01g005080.1Lcy01g005080.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005634 nucleus