Lcy01g004370 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g004370
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	S-protein homolog
Location	Chr01: 5579337 .. 5583399 (+)
RNA-Seq Expression	Lcy01g004370
Synteny	Lcy01g004370

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATGTAAAATTAAATTTAGTTTTTTTTTTTTTTTTTTTTGAGAGAATTAAATTTAGCTTTTAGAATGATTTTAGTTTAAATAAGCCCAACTATCACTAACACATTTTTTTTTTTTAATAATGATATTACATTTACAAATGAAGAAAAGAGATTTTTGAACTTTATGTAACCACTCAATCTATGCCTGGTCGCTTAAACAAATTGATCACTATGATTGGTAAATTTTTCAGTATTAGTATCAAGATAAAATACAAAAAAACATTAAAATGATTTTTTTTTTACATGATAATAAGTAGTATAGAGTAAGTGAAAAATAAAAGAGATATGTTGAAAAGCCAATAAAAAATAATAAATTGAATGTAGAATAAGGAATTGAATGTACATATATGCATGCATATATTTATTTGTATGGATAAAAAGTTTAGGTGTTCTTGCTTGGCAAAACAAGCTCCATGAATTCCAACTATAGCCATTTTTTAAAAAAATTCCCACGTCTATTTTGACATTTTTACCTCATTTTCTTTTTATCTTTGTATTTGACTAATTGACATCAATCACATATTGATATATAATGTTGATAGACATTTATCACTAATTTAAATCTATCAGTCTATTCCTGATATACATAATATTATATAGTGGATAAACGTTTGTAAGTGATAATTAATCGTTTGAATTAAACTTCTATCTGTGGTATATGAGAGTACAAAAAGGCAATTTGGTCCCATTTTTATCAAGGTATGAGCTTAAAGTTTACTCTCCCGTATTTGGTTGGGTTCACTCCGGGAGAAACTTCTTGCCTCTAGGATCAAATCTTAAAGGGACACTTTGAGTATTAATATGTTTGCTGCTATTATTTGGAGTCTTTGAATTGAAAGAAACAACGACTTGCATTTTCCACAAAAAAGTCTGAGCTATATCCACATTCTATAGGAGGATATTTTGCCTTCGACTGATCATTGGTCATTTGTTACTAACGTCTTTTTCAATTATAGTGCCTCTGACATCGCTCTTAATTGGAAGACATTCTTTAGCCTTTTGTATATGTTCCTCACACACGGCAGAATAAAGTATCCTCTTTCTAAAAATGAGAGTAAAAAGGAAATTATGTAAAAATGGTTAAATAAACATGAAATTTTTTTAAAAGCATTGTCATATTTGCAAAATTATAATCTTGTTTTTATATTTGCAAAATATGGAAAGGTGTGAATTGCCATTATTAAAGTTTTTTTTTTAACTTTTGACCTCTTGGTCAGGAGTATATGTCAATTACCGTTGAGCTATGCTCATTTTGGCGTCACTATCAAGTTTGCCTAAAAACTTCTTATGATCATGTACAAAATTAAATTATACATGCATGTCATGATTTTTTTTTCTTCTTTTCATTAAAAATTAAGTTTATTTCCTTATGAAAAAAAATCACTTATAACAAATTCGTTGTTTTTTTAATGTATTATTAATTTTTTTAATTAAAATTTGGAAAAATTTATATAGAAAGATCATTTTTTTCCCCAAAAAGAGAGCTAAATTTTAAAAAATAAATAAAATGAAAAGTATAAAAATAAAACAAAGGAATTGCCGATAAGCAAGAGTTTAATAGTGTTATTTATCACATACCTAACTCCAAACTCATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCCAAACTGTTACCTTTTCTGTAAAATACCATATAAGGGTAGTAACATACCATATAAAGGGATTTTACAATCTGTCGTACATGGAAAGATGAGATTGAAAAGGAAAGATGAGATTGAAAAAAGCCAATGAAATAAATCTCATATTCTCATCTATTAAAAAAAAAAAAAAAACTCATATTCTCATTTTTATCTTATTACTTTTTTTTTTAATTGTAGATATCGAGGTTAACTTACGGTTATACTCGACACTTTTTGACTAGACGTGATCACGACCGTTTCTTTTCTTAGAAATATCAAGAAATTGCATGCACTAGTAATTTTAAGGGAAAAATACACTTTTAGTCCCTGAAGTTTGAGTTAGGCTTCATTTTGATCCCTGAATTTTCAAACTCAACAATTTAGCCCTGAAGTTTGGTTTTAGTTTCATTTTGGTCCCTCCATCCATTTTTCCGTTAAAAACTAATGGATAGCACTATTTTTTCTATTTTAAAAAAATTATTTTTAATAAAAATATTATTATTTTTAATCTTTAAAATTTTTTTTTATTCATTCTCTCTTCCTCCTCATTTTTCTTCTACTATTTCTTCTTCTTTACAGTCAAACCTTCAATCCATGGCTGGCGACCACCGCTCGCTAGAAAACTGATGAGCTCCCTCCCTCCTTCCCTCTTCAGTTTTTTTTTTTAAAAAAAAAATTAAAAAAAGCTGGAGAAGAAGGGAAAAGAAAAGGAGAAGAGAAGGAGAAAAAAAATAAAAGAGTCGCCAGTGAGCGGTGGTAGCCGACTGTCGACCATGGATTGAAGGTCTTGACTGTTAAAACCTAACTCAAACCTCAGAGACTAAAAGTGTATTTTTCCCTAATTTTAAATAGGTTTATTAAAAATGTTAAATGTATTATTATTTTTTTTCATAACATATGGAGATTTGAACCTCAAACCTCTTGATCGAGGGTACAAGTTTTAATACCAGTTATGTTCTTATTAATTTATTATCTTTGTGCTTTTAAGTGTACATTTTCATTGCAAATGATTCATTCTCTAGACTAGTTATTCCTTATACCAATATGCATATACACTTTTCCAATGAAAGCAAAAGCAAAAAAATCCATTTCCAAAATCACACTTTTGTCAAACAACCCATTAAGCAGTGGTTTATGGACACTAGTTTTGAAGTTTCCTCAATTTCGAAGGGTGGTGAAATTCCTCCTTTTTATTATCACTACATTATTATCCTTTTTAATATATATGTTGATGGTCGATTTTGGTCAGAGGGAACTCACCTGACCTTCACGTGCCACCAATGGTAAATTTGTAGATGAGGGGGAAGACGTGGCCTGTAAGACAGTAAACCTGCACACCGGTGTGGTGCTTGCCACACCGACTCCAATGCTTAAGTCAGTAAGCAGAACGGTGGGGAGCGGAAAAGTAAGAGCAAGAGGAGAGAGTAGAGAATATAGAATGAGTTTCGGGATTAGAGTTCGGATCCCTTCTTCAGTGGTGAAGAGGGGTATAAATACATGTTCATCCTCCTAGCATTTTTAGGGTCTCGGAGGCGTTTTAGGTCAAACCAGGCAAAACCGGGGCTGACGGAGGCAGTAGGGGCCTAACGGCATTGGACGGACTCGGCCCGCGCGAGCGGGCCGAGGGTCGGGCCAAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGTCGGTTTTGCCTCCTTGGTCCATCTTTTAGCTCCTTGTATATCGGGGGTGGTCCAAAATTGCCTATAACAATATATATATATTTCGAAAGGTTAGCCAGGAGAAATTTTTACACACAATAGGGGCCTAACGACATTGGACGGACTCGGCCCTCGCGAGCGGGCCGAGGGTCGGGCCAAAAACCCGACCCCTTCGGTCTTGGCCCGTCCCACTTGCCGGTTTTGCCTCCTTGGTCCATCTTTCAGCTCCTTGTATATCGGGGTGGTCCAAAATTGCCTATAACAATATATATATATTTCGAAAGGTTAGCCAGGAGAAATTTTTACACACACACACACACACAACATTCTCCTTCTTCATCTTCATCACGGCGTCGTTTTCGACGTTCGAGTCATCAACGACTTCAAAAACAACTCATCTTTGCCTTTGGTGATATGGTGTTCCTCAAAAGACAGTGATTTGAGGGGCAGAGCCTTGCAAGAGCACGATGATTTCAGCTGGAGAGTGACAACAAATCTGTGGAAGAGCAACCACTTCTCTTGTACCATGAAATGGGATGCCAAAAGAAGGTCCTTCGATGCGTTTAAGGTTCGTAGAGACTTTTACCGATGTGGGAATTTCAAGAAGTGTTCTTGGTTGGTTAGGGAAGATGGCTACTATTTTAGCCCTGATGAGGTTAATTGGAAGAGGGATTTTCAGTGGTGA

mRNA sequence

ATGCCAGGAGAAATTTTTACACACACACACACACACAACATTCTCCTTCTTCATCTTCATCACGGCGTCGTTTTCGACGTTCGAGTCATCAACGACTTCAAAAACAACTCATCTTTGCCTTTGGTGATATGGTGTTCCTCAAAAGACAGTGATTTGAGGGGCAGAGCCTTGCAAGAGCACGATGATTTCAGCTGGAGAGTGACAACAAATCTGTGGAAGAGCAACCACTTCTCTTGTACCATGAAATGGGATGCCAAAAGAAGGTCCTTCGATGCGTTTAAGGTTCGTAGAGACTTTTACCGATGTGGGAATTTCAAGAAGTGTTCTTGGTTGGTTAGGGAAGATGGCTACTATTTTAGCCCTGATGAGGTTAATTGGAAGAGGGATTTTCAGTGGTGA

Coding sequence (CDS)

ATGCCAGGAGAAATTTTTACACACACACACACACACAACATTCTCCTTCTTCATCTTCATCACGGCGTCGTTTTCGACGTTCGAGTCATCAACGACTTCAAAAACAACTCATCTTTGCCTTTGGTGATATGGTGTTCCTCAAAAGACAGTGATTTGAGGGGCAGAGCCTTGCAAGAGCACGATGATTTCAGCTGGAGAGTGACAACAAATCTGTGGAAGAGCAACCACTTCTCTTGTACCATGAAATGGGATGCCAAAAGAAGGTCCTTCGATGCGTTTAAGGTTCGTAGAGACTTTTACCGATGTGGGAATTTCAAGAAGTGTTCTTGGTTGGTTAGGGAAGATGGCTACTATTTTAGCCCTGATGAGGTTAATTGGAAGAGGGATTTTCAGTGGTGA

Protein sequence

MPGEIFTHTHTHNILLLHLHHGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCTMKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW

Homology

[Close]

BLAST of Lcy01g004370 vs. ExPASy TrEMBL
Match: A0A5D3CZS1 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001360 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.0e-56
Identity = 98/112 (87.50%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           HGV+F+VRVIN FKNNSSLPLVIWCSSK+SDL GRALQEHDDFSW+VTT LWKSN FSCT
Sbjct: 34  HGVIFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCT 93

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWDAKR+SFDAFKV RDFYRCGNFKKCSWLV EDG+YFSPDE+NWK+DFQW
Sbjct: 94  MKWDAKRKSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKDFQW 145

[Close]

BLAST of Lcy01g004370 vs. ExPASy TrEMBL
Match: A0A1S4E2Y6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499490 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.0e-56
Identity = 98/112 (87.50%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           HGV+F+VRVIN FKNNSSLPLVIWCSSK+SDL GRALQEHDDFSW+VTT LWKSN FSCT
Sbjct: 34  HGVIFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCT 93

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWDAKR+SFDAFKV RDFYRCGNFKKCSWLV EDG+YFSPDE+NWK+DFQW
Sbjct: 94  MKWDAKRKSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKDFQW 145

[Close]

BLAST of Lcy01g004370 vs. ExPASy TrEMBL
Match: A0A0A0LNI8 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G153590 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.2e-54
Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           HGVVF+VRVIN FKNNSSLPLVIWCSSK++DL GRALQEHDDFSW+VTT LWKSN FSCT
Sbjct: 12  HGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCT 71

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWDAKRRSFDAFKV RDFYRCG+FKKCSWLV EDG+YFS DE+NWK+DFQW
Sbjct: 72  MKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKDFQW 123

[Close]

BLAST of Lcy01g004370 vs. ExPASy TrEMBL
Match: A0A6J1KN10 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111494815 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-54
Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           HGVV++VRVIN F NNSSLPLVIWCSSKDSDL GRALQEHDDFSWRVTT LW +N F CT
Sbjct: 33  HGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTTKLWNTNQFCCT 92

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWDAKR+SFDAFKV RDFYRCG FKKCSWLVREDG+YFSPDEVNWK+DFQW
Sbjct: 93  MKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKDFQW 144

[Close]

BLAST of Lcy01g004370 vs. ExPASy TrEMBL
Match: A0A6J1HNC1 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111464494 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.6e-54
Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           HGVV++VRVIN F NNSSLPLVIWCSSKDSDL GRALQEHDDFSWRVTT LW +N F CT
Sbjct: 33  HGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTTKLWNTNQFCCT 92

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWDAKR+SFDAFKV RDFYRCG FKKCSWLVREDG+YFSPDEVNWK+DFQW
Sbjct: 93  MKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKDFQW 144

[Close]

BLAST of Lcy01g004370 vs. NCBI nr
Match: XP_016902587.1 (PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo] >KAA0032040.1 self-incompatibility family protein [Cucumis melo var. makuwa] >TYK16860.1 self-incompatibility family protein [Cucumis melo var. makuwa])

HSP 1 Score: 226.9 bits (577), Expect = 1.0e-55
Identity = 98/112 (87.50%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           HGV+F+VRVIN FKNNSSLPLVIWCSSK+SDL GRALQEHDDFSW+VTT LWKSN FSCT
Sbjct: 34  HGVIFEVRVINGFKNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCT 93

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWDAKR+SFDAFKV RDFYRCGNFKKCSWLV EDG+YFSPDE+NWK+DFQW
Sbjct: 94  MKWDAKRKSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEINWKKDFQW 145

[Close]

BLAST of Lcy01g004370 vs. NCBI nr
Match: XP_038875976.1 (S-protein homolog 5-like isoform X1 [Benincasa hispida])

HSP 1 Score: 224.9 bits (572), Expect = 4.0e-55
Identity = 99/112 (88.39%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           H VVF+VRVIN F+NNSSLPLVIWCSSK+SDL GRALQEHDDFSW+VTT LWKSN FSCT
Sbjct: 47  HDVVFEVRVINGFRNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCT 106

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWDAKRRSFDAFKV RDFYRCGNFKKCSWLV EDG+YFSPDEVNWK+DFQW
Sbjct: 107 MKWDAKRRSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQW 158

[Close]

BLAST of Lcy01g004370 vs. NCBI nr
Match: XP_004139019.1 (S-protein homolog 5 [Cucumis sativus])

HSP 1 Score: 222.2 bits (565), Expect = 2.6e-54
Identity = 97/112 (86.61%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           HGVVF+VRVIN FKNNSSLPLVIWCSSK++DL GRALQEHDDFSW+VTT LWKSN FSCT
Sbjct: 12  HGVVFEVRVINGFKNNSSLPLVIWCSSKENDLGGRALQEHDDFSWKVTTKLWKSNQFSCT 71

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWDAKRRSFDAFKV RDFYRCG+FKKCSWLV EDG+YFS DE+NWK+DFQW
Sbjct: 72  MKWDAKRRSFDAFKVPRDFYRCGHFKKCSWLVTEDGFYFSSDEINWKKDFQW 123

[Close]

BLAST of Lcy01g004370 vs. NCBI nr
Match: XP_038875977.1 (S-protein homolog 5-like isoform X2 [Benincasa hispida])

HSP 1 Score: 221.1 bits (562), Expect = 5.7e-54
Identity = 98/111 (88.29%), Postives = 104/111 (93.69%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           H VVF+VRVIN F+NNSSLPLVIWCSSK+SDL GRALQEHDDFSW+VTT LWKSN FSCT
Sbjct: 47  HDVVFEVRVINGFRNNSSLPLVIWCSSKESDLGGRALQEHDDFSWKVTTKLWKSNQFSCT 106

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQ 132
           MKWDAKRRSFDAFKV RDFYRCGNFKKCSWLV EDG+YFSPDEVNWK+DFQ
Sbjct: 107 MKWDAKRRSFDAFKVPRDFYRCGNFKKCSWLVTEDGFYFSPDEVNWKKDFQ 157

[Close]

BLAST of Lcy01g004370 vs. NCBI nr
Match: KAG6593795.1 (S-protein-like 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 220.7 bits (561), Expect = 7.5e-54
Identity = 97/112 (86.61%), Postives = 103/112 (91.96%), Query Frame = 0


Query: 21  HGVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCT 80
           HGVV++VRVIN F NNSSLPLVIWCSSKDSDL GRALQEHDDFSWRVTT LW +N F CT
Sbjct: 129 HGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTTKLWNTNQFCCT 188

Query: 81  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWDAKR+SFDAFKV RDFYRCG FKKCSWLVREDG+YFSPDEVNWK+DFQW
Sbjct: 189 MKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKDFQW 240

[Close]

BLAST of Lcy01g004370 vs. TAIR 10
Match: AT3G24060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 161.4 bits (407), Expect = 5.0e-40
Identity = 72/112 (64.29%), Postives = 84/112 (75.00%), Query Frame = 0


Query: 22  GVVFDVRVINDFKNNSSLPLVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWK-SNHFSCT 81
           G  FDVRVIN F++NSSLPLVIWC+S   DL GRALQE DDF W    +LW     ++CT
Sbjct: 35  GEEFDVRVINSFRDNSSLPLVIWCTSPQGDLGGRALQEGDDFEWTAKIDLWSWMAEYTCT 94

Query: 82  MKWDAKRRSFDAFKVRRDFYRCGNFKKCSWLVREDGYYFSPDEVNWKRDFQW 133
           MKWD+KR+ F+AFKV RD  RCG+ KKCSW VREDG+YFS DEV W +DF W
Sbjct: 95  MKWDSKRKQFEAFKVSRDSNRCGSTKKCSWSVREDGFYFSSDEVYWTKDFSW 146

[Close]

BLAST of Lcy01g004370 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 52.0 bits (123), Expect = 4.3e-07
Identity = 28/91 (30.77%), Postives = 40/91 (43.96%), Query Frame = 0


Query: 41  LVIWCSSKDSDLRGRALQEHDDFSWRVTTNLWKSNHFSCTMKWDAKRRSFDAFKVRRDFY 100
           L + C SKD DL    L+   D+ +    N+W++  FSC M      +    F      +
Sbjct: 41  LKVHCRSKDDDLGEHILKIGQDYEFTFGDNIWQTTSFSCQMDQGPNFKHHLDFVAYETSW 100

Query: 101 RCGNFKKCSWLVREDGYYFSPDEVNWKRDFQ 132
                  C W+ REDG YFS D V   + +Q
Sbjct: 101 SKALEASCKWIGREDGIYFSQDGVPPTKKYQ 131

The following BLAST results are available for this feature:

BLAST of Lcy01g004370 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g004370 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZS1	5.0e-56	87.50	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001...	[more]
A0A1S4E2Y6	5.0e-56	87.50	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499490 PE=3 SV=1	[more]
A0A0A0LNI8	1.2e-54	86.61	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G153590 PE=3 SV=1	[more]
A0A6J1KN10	3.6e-54	86.61	S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111494815 PE=3 SV=1	[more]
A0A6J1HNC1	3.6e-54	86.61	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111464494 PE=3 SV=1	[more]

BLAST of Lcy01g004370 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016902587.1	1.0e-55	87.50	PREDICTED: uncharacterized protein LOC103499490 [Cucumis melo] >KAA0032040.1 sel...	[more]
XP_038875976.1	4.0e-55	88.39	S-protein homolog 5-like isoform X1 [Benincasa hispida]	[more]
XP_004139019.1	2.6e-54	86.61	S-protein homolog 5 [Cucumis sativus]	[more]
XP_038875977.1	5.7e-54	88.29	S-protein homolog 5-like isoform X2 [Benincasa hispida]	[more]
KAG6593795.1	7.5e-54	86.61	S-protein-like 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Lcy01g004370 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24060.1	5.0e-40	64.29	Plant self-incompatibility protein S1 family	[more]
AT5G04350.1	4.3e-07	30.77	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 27..132 e-value: 6.0E-23 score: 81.4
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 19..132
None	No IPR available	PANTHER	PTHR31232:SF8	BNAA01G23250D PROTEIN	coord: 19..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g004370.1	Lcy01g004370.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane