Lcy01g004170 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g004170
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	high mobility group B protein 15
Location	Chr01: 5247867 .. 5252838 (+)
RNA-Seq Expression	Lcy01g004170
Synteny	Lcy01g004170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGACAGCTTTGCTGTACCATTTGCTTTTTTGGGTCTTTGAATCTCTACCTTATTACTGGGAGTTATTTCCATCTGTTCAGGTAGTTGTGGCGTTTCTTGTTATCTCAGTTCTGGACTTCCAATTTGCATGATGATGATTCTGAAGGGGAGTGGGGGGTGGGGTGGGGTGGGGTTATTTATCTCTTTGAACTTTCTGTTGTAATTGTTCATTTATGAATCTTTGCATGCAGTGCAGTTGATTCAATCTTCTATTGTTGTTTTGTTTCCTTGAGGTTTTGTATAACTCAGTGACATTGCTTGTATGCTATGTAAAAGGAATTGTGGAAAGATTATCTTGCTGACTGGAGGAGAAGAAATCAAGGGAGAGGGTTTTCTGGTTTTTCAAGACAAAGCTAAATATAAAGGTATCTCTTGCTTTTGTTTATTACTTTTCCTCCCTGTTATGTATTCTTTGTGAGCTGCCATTTGTTTTTCCATAAATCCCAGCTTTATGTTGGTAGATTTCAACTAACAAACCACATTTCTAATTGTAAAGAAACTTGATTGTGTATGGTTTAATGGTTTAAGAATAATCTTTTGAGTATATAACTGTAACACCCATATTCTCAGGGCGTTGTCCAAGCCCAAAGACCAATACCATCACATTCTGCAGCTTCCATCTTTCTTCAATAGAGCAATTTTTCTAGAGGAATCAATCTCAACTGCTTGAGGACATATTCTAGCTTCTATTGTCACTAGTAGACCAGCCAGATTGCTTATAACCTAGGCTACATCAACTTCTTGGATGTAAGGTATCAATTTAGCAAAGGTATAATGACACATCCCCTTCAGCATTCTGGATAATTGTTTCTACCCTAATCTTTTTAGGGCTGGACTGAATAAAAATATTTGTATTTGAAATGATATAGTTACAGTGATAGTAATTCATCCTTCTGGGATATATCATTGTTGCATCTGTATTCTGTACATTTTGTTAGCTTCTGACATTCATTATAAAGATAGATAGGGGCATTATCTGTAATACACTTAGGGGTTCTGCCCTTAAGAATGAGGACAATGGCTGTCTGGTATAAAGCTTTTGGGGATTTCTTGTTGTTTAAAACCTTTTGGCAGCAATGATTCACAGCTTTCCCACAAAATGCCATAAATCTTGAAAAAACAAAGCCAGCAACCCATCAGGGCCAGGGGCTTTGGGGTAGATTTATCCAGTTACAGGCCACTTAAACCTCATCCTCAGTGTAGGTAGGTATGAAAGTCTCATTCATTTCATCACTTTCACATGGCTTGAGACCTCTTTTAGAAAGTAGGAAACTCAATCTTACCTATTACAAGAAAAAAGACTATTGAACTAATCAGATATTAGTATAAGTTGTATAACACTCCCCGTTTCGACTTCCTCCACCTAACATCATTATGATTCATAAGAAGACCTTCCATTTTATTTTTGTTCTTGCTTTTAAGTGCCTTTCCTATAGAACCATCTTGTGTTTCTATCCCCCACCGCAACCAATCTTCCCTAGACTAGACCTTGCTTCTAGAAAATTTTCTCATTAAATGTTCTAAATTGATCTTCTGCCTCTCTTACCTCCCTATTAGATTCAACTACTCTTTGCAAGTCGCTTCTTTAATTTTCCCTTACATAGCCTTTTCTCTTGTTCTTCTCCTGGATCTCTAACCTCTTAATACTGCACCGGACTTTCTTCATGGTTTTAAAAGCTCTGCTGTACCATTTTCTTCTCTGGGTCTTTGGATCTCTACGTTATTGCTGGTAGCTATTTCATCTGCTCAGGTAGTTGTGGTGCCCCTTATTTTCCTATTTCTGAACTTCCTATTTGCATAATGATTCTTAAAGGGATGGGGGTGGGGGGTTATGTGAACTTCTGTTGTTTTTGTCTATTTATGACTACTCTTTGCATGTAATGCAGCTGGTTCAACCTTTTATTTCTTTTTTGTTTTCTTCAAATTTTGTATAACACAGTGACTGATGTGCTTGAACAGTTCATTGGTTGATGGTAGAAGAGGAAAGAACAGAGGCAGGCTGGGGTAGCAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGTGATTGAAGCTTCTTCTAACTGTGTTCCGTACCCACCACCACAAACAACATATGAGGATATTGTAGCCAATCCCAAGATCTTTATGGCATCCTTGGAAAAACTCCATTCTCTCATGGCAACCAAGTTCATGTATTTTTCTTAAACATCTCCTCCTTTACCTTTGGAGTGGGCATAGTCATTCATTTAATGGAAGTTGCTCAAGTCTTGTTTAAGTACAGATTAAATTTCTTTGTAAATCAATAATAGAAAATCCTGATGCTGCCTTGTATTCCTGGTCTTGGCACGGAAGTAAAAGCTGATTTTGCTTGTTCCAAAGATTTTTCTGTACTTCTTATGTTTCCTTCTTGGAACAACTATCTGTTCTCCATTTTGCTGGTTTTGTAATTAGATTCTGTTTTTCACTTTTACCTCCCGAAAATGCAGGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTCGTGGAGGTCACTTCTCGTGGTGGCATTGAGAAGGTAAAATAAACTTGCTATGAATCTTCTGTGTCAGTATTTTCTTATCTTAAACTTGACGATTGACCTTGGATTTGAGACTTGGTCTTTATATCTTTAGAGGGAACATGTAAGTCGGTTATTTGAGCCTATTTCCAGCTTTTTCATTCACTTGTATGATTGTTAAACATTGCGGCACTTGCAGATGATTAGAAGGTTGAGTTTTTTAACTCTTTCTGTACACGTTTTGATGCTATAATCCTTATTGAATTATGTTATTCCGAGTGTGTTTATCCGTTTCTTTGCCAATATTGGATTTGATTTCTTTATCGAAAAAGGCACATGGGTTCTAAAAGCATGATAAATATTCTCACCTAATGAGTCATAGGCTTTTTAGGTTGATTATGTTATTATTAGAGCATTGGTGAAGTACAAATCAGGGCCGTGCCGAAAGTTTCTGTATCAATAGCGGGTTCCTTGCCCATCAAAGATTTAGCCTGCATCTACAATGCCCGCATGAAAATGTTGTGCATTCTTTTTCCAAACAGGAGTGATTGTCATATATAACTCTAGTTATGATTTGGACCTCATTTTCAATGATGTTGTGCCATGCTATTGAATATTTTTGCTATGGTTTTTGCTTCTATAATGTTCCTTCTCTGTGGCCGGTGGATAAAAGTTGAATTGCTCTAGTTTACATTGGAAAACACATTATATGTTACAAATTCATATTATCGTGCAGCACGATCATGTAACAATCTGGATTTAACAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCGGTTTTCAACTTTCCTTCGACGGCCACCAACGCATCTTTTGTGCTGAGGAAGTATTATCTTTCATTGCTTCATCATTTTGAACAGATTTACTTCTTTAAAGCTGTGGGATGGACACCAATGATATCTGGTAAGTGCTACTAGAGTACCCTTTTTACTCCTGAAGAAACTGCCATATCAATTGATTTTCTAACATAACAATAGTTCAGATTCCTCTCCATGCCCAAGTGCTGCGACAATTCCTGTACAGGGGATGGCCTCTATGTTGCCGCCATCAGATAATCAAGCAGCGTCCCAGCAGCCCCGGACTGCTGCAACCGAACTTCCAGCAGGTGTATTATATGGTCCTTTAGAAATATGCACAGAAAATAAGTCAGAGCAATATATTTGTGTGCTTCCATGCCTTCTTTACGAGTTCATGTGAATATGTGATATGCCATATAAATACTGCAATTTCTTTCTGTTCTTGCTTTGTATTTTATAGTGGATGACACTCTGGTTTCTCTTGTTGAATACTAAAGTTGTGACCATGTCTGGTTAGTAATTAGATGATTCTTTTATCCTTACAGTTGCTCCGAGTTTGTCATCGCCAGCAGGAGGGTTTCCAGTGATCGGGGTCATTGATGGAAAATTTGATAGCGGATATCTCGTTACTGTTACCGTAGGAACAGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCGGAGCAACCTGCTCAGCAACAAGTATTGCAGCCTGGTGGTATTTTTGCCAAAGATGGTGCTACCTCCACCACACCAAATGCTCATCGTCGTCGCCGTCGGAAGAAATCCGAGATAAAACGGAGGGATCCTGCTCATCCAAAGCCAAATAGAAGTGGCTACAACTTCTTCTTTAAAGAACAGCATGCTAGACTCAAACCATTATACCCGGGGAAGGACAGAGAGATAAGTAGAATGATTGGTGAACTTTGGAATAAGGTTAAAGAGTCAGAAAGAACAGTAAGGATTGCAATACTCTTATCTTAAACTTTAAGAATCGGTCACATCTTCGGTAGTAGCCAACGTCGATAAATTTTCTGTACTTGCAGGTATATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAATCGAGATGGAGGATTACAGAGAGAAGCTGAGGACGGGGCAGATCATCAGCGATGCAGTGCCATTACAACAGCGTCTTCCCGAGCCAGACCTGAATATGGTCTATGCTGACAAAAATGACGAAACTGAGGGTGTTGACTCTCCTCAAAGCCCGGATAATGATACAAGCTACGTCGAAGGCGACTCTGGAGAGTATAAAACTGAAGAGAAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAGGAGGATTCGGAAGAAGATGCATCTCCACACGGAGTTGGCAATGTGGACGTTAACATTTTGGTTCAGGAGGAACACTGCGAGACGAGGACTGCCGAAGAGGATGTTAGAAAAGAGAGTAGCACGGTCGGCGACAATAAAGAAGTTTTCGCCGGGGATTCGGTAATGGTGGAGGCAAAGGAAGAACCAGAACCAGAACCAACAACAGCCATTAGAGAAGGTTAA

mRNA sequence

ATGGCTTTGACAGCTTTGCTGTACCATTTGCTTTTTTGGGTCTTTGAATCTCTACCTTATTACTGGGAGTTATTTCCATCTGTTCAGACCAGCCAGATTGCTTATAACCTAGGCTACATCAACTTCTTGGATGTAAGGTATCAATTTAGCAAAGTTCATTGGTTGATGGTAGAAGAGGAAAGAACAGAGGCAGGCTGGGGTAGCAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGTGATTGAAGCTTCTTCTAACTGTGTTCCGTACCCACCACCACAAACAACATATGAGGATATTGTAGCCAATCCCAAGATCTTTATGGCATCCTTGGAAAAACTCCATTCTCTCATGGCAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTCGTGGAGGTCACTTCTCGTGGTGGCATTGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCGGTTTTCAACTTTCCTTCGACGGCCACCAACGCATCTTTTGTGCTGAGGAAGTATTATCTTTCATTGCTTCATCATTTTGAACAGATTTACTTCTTTAAAGCTGTGGGATGGACACCAATGATATCTGATTCCTCTCCATGCCCAAGTGCTGCGACAATTCCTGTACAGGGGATGGCCTCTATGTTGCCGCCATCAGATAATCAAGCAGCGTCCCAGCAGCCCCGGACTGCTGCAACCGAACTTCCAGCAGTTGCTCCGAGTTTGTCATCGCCAGCAGGAGGGTTTCCAGTGATCGGGGTCATTGATGGAAAATTTGATAGCGGATATCTCGTTACTGTTACCGTAGGAACAGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCGGAGCAACCTGCTCAGCAACAAGTATTGCAGCCTGGTGGTATTTTTGCCAAAGATGGTGCTACCTCCACCACACCAAATGCTCATCGTCGTCGCCGTCGGAAGAAATCCGAGATAAAACGGAGGGATCCTGCTCATCCAAAGCCAAATAGAAGTGGCTACAACTTCTTCTTTAAAGAACAGCATGCTAGACTCAAACCATTATACCCGGGGAAGGACAGAGAGATAAGTAGAATGATTGGTGAACTTTGGAATAAGGTTAAAGAGTCAGAAAGAACAGTATATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAATCGAGATGGAGGATTACAGAGAGAAGCTGAGGACGGGGCAGATCATCAGCGATGCAGTGCCATTACAACAGCGTCTTCCCGAGCCAGACCTGAATATGGTCTATGCTGACAAAAATGACGAAACTGAGGGTGTTGACTCTCCTCAAAGCCCGGATAATGATACAAGCTACGTCGAAGGCGACTCTGGAGAGTATAAAACTGAAGAGAAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAGGAGGATTCGGAAGAAGATGCATCTCCACACGGAGTTGGCAATGTGGACGTTAACATTTTGGTTCAGGAGGAACACTGCGAGACGAGGACTGCCGAAGAGGATGTTAGAAAAGAGAGTAGCACGGTCGGCGACAATAAAGAAGTTTTCGCCGGGGATTCGGTAATGGTGGAGGCAAAGGAAGAACCAGAACCAGAACCAACAACAGCCATTAGAGAAGGTTAA

Coding sequence (CDS)

ATGGCTTTGACAGCTTTGCTGTACCATTTGCTTTTTTGGGTCTTTGAATCTCTACCTTATTACTGGGAGTTATTTCCATCTGTTCAGACCAGCCAGATTGCTTATAACCTAGGCTACATCAACTTCTTGGATGTAAGGTATCAATTTAGCAAAGTTCATTGGTTGATGGTAGAAGAGGAAAGAACAGAGGCAGGCTGGGGTAGCAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGTGATTGAAGCTTCTTCTAACTGTGTTCCGTACCCACCACCACAAACAACATATGAGGATATTGTAGCCAATCCCAAGATCTTTATGGCATCCTTGGAAAAACTCCATTCTCTCATGGCAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTCGTGGAGGTCACTTCTCGTGGTGGCATTGAGAAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCGGTTTTCAACTTTCCTTCGACGGCCACCAACGCATCTTTTGTGCTGAGGAAGTATTATCTTTCATTGCTTCATCATTTTGAACAGATTTACTTCTTTAAAGCTGTGGGATGGACACCAATGATATCTGATTCCTCTCCATGCCCAAGTGCTGCGACAATTCCTGTACAGGGGATGGCCTCTATGTTGCCGCCATCAGATAATCAAGCAGCGTCCCAGCAGCCCCGGACTGCTGCAACCGAACTTCCAGCAGTTGCTCCGAGTTTGTCATCGCCAGCAGGAGGGTTTCCAGTGATCGGGGTCATTGATGGAAAATTTGATAGCGGATATCTCGTTACTGTTACCGTAGGAACAGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCGGAGCAACCTGCTCAGCAACAAGTATTGCAGCCTGGTGGTATTTTTGCCAAAGATGGTGCTACCTCCACCACACCAAATGCTCATCGTCGTCGCCGTCGGAAGAAATCCGAGATAAAACGGAGGGATCCTGCTCATCCAAAGCCAAATAGAAGTGGCTACAACTTCTTCTTTAAAGAACAGCATGCTAGACTCAAACCATTATACCCGGGGAAGGACAGAGAGATAAGTAGAATGATTGGTGAACTTTGGAATAAGGTTAAAGAGTCAGAAAGAACAGTATATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAATCGAGATGGAGGATTACAGAGAGAAGCTGAGGACGGGGCAGATCATCAGCGATGCAGTGCCATTACAACAGCGTCTTCCCGAGCCAGACCTGAATATGGTCTATGCTGACAAAAATGACGAAACTGAGGGTGTTGACTCTCCTCAAAGCCCGGATAATGATACAAGCTACGTCGAAGGCGACTCTGGAGAGTATAAAACTGAAGAGAAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAGGAGGATTCGGAAGAAGATGCATCTCCACACGGAGTTGGCAATGTGGACGTTAACATTTTGGTTCAGGAGGAACACTGCGAGACGAGGACTGCCGAAGAGGATGTTAGAAAAGAGAGTAGCACGGTCGGCGACAATAAAGAAGTTTTCGCCGGGGATTCGGTAATGGTGGAGGCAAAGGAAGAACCAGAACCAGAACCAACAACAGCCATTAGAGAAGGTTAA

Protein sequence

MALTALLYHLLFWVFESLPYYWELFPSVQTSQIAYNLGYINFLDVRYQFSKVHWLMVEEERTEAGWGSRKELTMASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDIVANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMASMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNDETEGVDSPQSPDNDTSYVEGDSGEYKTEEKEEEEEEEEEEEEDSEEDASPHGVGNVDVNILVQEEHCETRTAEEDVRKESSTVGDNKEVFAGDSVMVEAKEEPEPEPTTAIREG

Homology

[Close]

BLAST of Lcy01g004170 vs. ExPASy Swiss-Prot
Match: Q9MAT6 (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 9.1e-104
Identity = 232/430 (53.95%), Postives = 288/430 (66.98%), Query Frame = 0


Query: 74  MASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDIVANPKIFMASLEKLHSLMATKFMIPI 133
           MAS+S      +P+   ++ CV    P+ TYE +VA+P++FM SLE+LHSL+ TKFM+PI
Sbjct: 1   MASSSCLKQGSVPM---NNVCV---TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPI 60

Query: 134 IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 193
           IGG++LDLH+LFVEVTSRGGI K++ ERRWKEVT+ F FP TATNAS+VLRKYY SLL++
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNN 120

Query: 194 FEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMASMLPPSDNQAASQQPRTAATELPAVA 253
           +EQIYFF++ G  P   DS   PSA    +QG  ++ P  + QA +  P+         A
Sbjct: 121 YEQIYFFRSNGQIP--PDSMQSPSARPCFIQG--AIRPSQELQALTFTPQPKIN----TA 180

Query: 254 PSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ-APSEQPAQQQVLQPGGIF 313
             L     G  V+GVIDGKF+SGYLVTVT+G+E+LKGVLYQ  P    + Q   Q  G+ 
Sbjct: 181 EFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVL 240

Query: 314 AKDGATSTTPN------AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFKEQHARLKPLYP 373
                 S  P         RRRRRKKSEIKRRDP HPKPNRSGYNFFF EQHARLKPL+P
Sbjct: 241 PNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHP 300

Query: 374 GKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQ 433
           GKDR+ISRMIGELWNK+ E E+ +YQ KAM+DKERYR EMEDYREK + GQ+IS+AVPLQ
Sbjct: 301 GKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQ 360

Query: 434 QRLPEPDLNMVYAD-KNDETEGVDSPQSPDNDTSYVEGDSGEYKTEEKEEEEEEEEEEEE 493
           QRLPE +++M  AD   DE E  D            EGDS     E +  +++  E + E
Sbjct: 361 QRLPEQNVDMAEADLPIDEVEEDDE-----------EGDSSGSSGESEPHDDQSIETDPE 405

Query: 494 DSEEDASPHG 496
             E   +P G
Sbjct: 421 LEEPSLNPSG 405

[Close]

BLAST of Lcy01g004170 vs. ExPASy Swiss-Prot
Match: Q9SGS2 (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.9e-65
Identity = 142/320 (44.38%), Postives = 193/320 (60.31%), Query Frame = 0


Query: 97  YPPPQTTYEDIVANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEK 156
           YP P   +E +V +  +F  +L + HS+M+TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 157 VIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPC- 216
           V+ E++W+EV  VF F +T T+ASFVLRK+YL+LL H+EQ++ F A G  P++   +   
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG--PLLHPIATFH 146

Query: 217 PSAATIPVQGMASMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDS 276
            + +T     +    PPS     +  P              S  +  F  IG I+GKFD 
Sbjct: 147 ANPSTSKEMALVEYTPPSIRYHNTHPP--------------SQGSSSFTAIGTIEGKFDC 206

Query: 277 GYLVTVTVGTEKLKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEI 336
           GYLV V +G+E L GVLY +    P+      P  +              RRR  K+   
Sbjct: 207 GYLVKVKLGSEILNGVLYHSAQPGPSS----SPTAVLNNAVVPYVETGRRRRRLGKRRRS 266

Query: 337 KRR-DPAHPKPNRSGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEK 396
           +RR DP +PKPNRSGYNFFF E+H +LK LYP K+RE +++IGE W+ +   ER VYQ+ 
Sbjct: 267 RRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDI 326

Query: 397 AMKDKERYRIEMEDYREKLR 415
            +KDKERY+ E+ +YRE LR
Sbjct: 327 GLKDKERYQRELNEYRETLR 326

[Close]

BLAST of Lcy01g004170 vs. ExPASy Swiss-Prot
Match: Q9LTT3 (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.6e-62
Identity = 133/317 (41.96%), Postives = 183/317 (57.73%), Query Frame = 0


Query: 104 YEDIVANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 163
           Y+D+V N  +F   L     L +    +P +GG  LDLHRLF+EVTSRGGIE+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 164 KEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPV 223
           KEV   F+FP+T T+ASFVLRKYYL  L   E +Y+ +                      
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--------------------- 155

Query: 224 QGMASMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTV 283
                  P S  Q+  +  ++ A E P     +  P  G+ V G IDGKFDSGYLVT+ +
Sbjct: 156 -------PVSSLQSTDEALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKL 215

Query: 284 GTEKLKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHP 343
           G+++LKGVLY  P      QQ ++           S    + +RR RKKS++   D   P
Sbjct: 216 GSQELKGVLYHIPQTPSQSQQTME---------TPSAIVQSSQRRHRKKSKLAVVDTQKP 275

Query: 344 KPNRSGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYR 403
           K +RSGYNFFF EQ+ARLKP Y G++R I++ IG +W+ + ESE+ VYQ+K +KD ERYR
Sbjct: 276 KCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYR 315

Query: 404 IEMEDYREKLRTGQIIS 421
           IEM +Y+    +G   S
Sbjct: 336 IEMLEYKSSHESGATAS 315

[Close]

BLAST of Lcy01g004170 vs. ExPASy Swiss-Prot
Match: Q9LG02 (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 1.9e-45
Identity = 120/320 (37.50%), Postives = 169/320 (52.81%), Query Frame = 0


Query: 104 YEDIVANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 163
           Y+DIV NP++F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 164 KEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPV 223
           KEV   FNF +T TN++FVLRK YL +L  FE +Y+F+A      +S       A  + +
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA-----PLSTFWEKEKALKLLI 149

Query: 224 QGMASMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTV 283
           +  A+     D  +   +P T  T                   G+IDGKF+SGYL++  V
Sbjct: 150 EKSAN----RDKDSQELKPGTVIT-------------------GIIDGKFESGYLISTKV 209

Query: 284 GTEKLKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDP-AH 343
           G+EKLKG+LY    E                            +R +KK++  + D    
Sbjct: 210 GSEKLKGMLYHISPE---------------------------TKRGKKKAKSSQGDSHKP 269

Query: 344 PKPNRSGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERY 403
           PK  R+GYNFF  EQ  R+K    G+     +  G +W  + ES+R VY EK+ +D +RY
Sbjct: 270 PKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRY 294

Query: 404 RIEMEDYREKL--RTGQIIS 421
           ++E+  YR  +  R  +I++
Sbjct: 330 KMEILQYRSLMESRVAEIVA 294

[Close]

BLAST of Lcy01g004170 vs. ExPASy Swiss-Prot
Match: Q68CP9 (AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2 PE=1 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 3.0e-14
Identity = 37/88 (42.05%), Postives = 55/88 (62.50%), Query Frame = 0


Query: 114 FMASLEKLHSLMATKF-MIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNF 173
           F+  L + H    + F  IP +GGKELDLH L+  VT+ GG  KV  + +W E+   FNF
Sbjct: 19  FLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGFAKVSEKNQWGEIVEEFNF 78

Query: 174 PSTATNASFVLRKYYLSLLHHFEQIYFF 201
           P + +NA+F L++YYL  L  +E+++ F
Sbjct: 79  PRSCSNAAFALKQYYLRYLEKYEKVHHF 106

[Close]

BLAST of Lcy01g004170 vs. ExPASy TrEMBL
Match: A0A0A0LL59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1)

HSP 1 Score: 833.6 bits (2152), Expect = 5.0e-238
Identity = 437/500 (87.40%), Postives = 466/500 (93.20%), Query Frame = 0


Query: 56  MVEEERTEAGWGSRKELTMASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDIVANPKIFM 115
           M+EEERTEAGWGSRKELTMASTSFAGGKQLPVIE +SNCVPYPPPQTTYEDI+AN KIFM
Sbjct: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60

Query: 116 ASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 175
            +LEKLHSLM TKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 176 ATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMASMLPPSDN 235
           ATNASFVLRKYY+SLLHHFEQIYFFKAVGWTP+ SDSSPCPSA+ IP QG+ SMLPPSDN
Sbjct: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDN 180

Query: 236 QAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 295
           QAAS QP++ ATELPAV+PS +SP GGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA
Sbjct: 181 QAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQA 240

Query: 296 PSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFK 355
           P EQP+Q QVLQP G FAKDG+T TTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 
Sbjct: 241 P-EQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 300

Query: 356 EQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIEMEDYREKLRT 415
           EQHARLKPLYPGKDREISRMIG+LWNK+KESERTVYQEKAMKDKERYRIEM DYREKLRT
Sbjct: 301 EQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRT 360

Query: 416 GQIISDAVPLQQRLPEPDLNMVYADKNDETEGVDSPQSPDNDTSYVEGDSGEYKTEEKEE 475
           GQIISDAVPLQQRLPEPDLNMVY DKN+ETEG +S Q+PD+DTSYVEGDSGEYKTEEKEE
Sbjct: 361 GQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTEEKEE 420

Query: 476 -EEEEEEEEEEDSEEDASPHGVGNVDVNILVQEEHCETR-TAEEDVRKESSTVGDNKEVF 535
            EE++EE+EE+DSEEDASP G+GNVDVNILV+EE CETR T  E+VRKESSTVGD KEV 
Sbjct: 421 DEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESSTVGDKKEVL 480

Query: 536 AGDSVMVEAKEEPEPEPTTA 554
           AGDSVMVE + +  PEPTTA
Sbjct: 481 AGDSVMVEVEAKEVPEPTTA 498

[Close]

BLAST of Lcy01g004170 vs. ExPASy TrEMBL
Match: A0A6J1CAX2 (high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009817 PE=4 SV=1)

HSP 1 Score: 818.1 bits (2112), Expect = 2.2e-233
Identity = 438/508 (86.22%), Postives = 458/508 (90.16%), Query Frame = 0


Query: 56  MVEEERTEAGWGSRKELTMASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDIVANPKIFM 115
           MVEEERTEAGWGSRKELTMASTSF GGK LPVIE SSNCV YPPPQ TYEDI+ NPKIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 116 ASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 175
            SLEKLHS+M TKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 176 ATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMASMLPPSDN 235
           ATNASFVLRKYYLSLLHHFEQI+FFKAVGWTPMISDS  CPS A IP QG  SM PPSDN
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISDSPQCPSPAPIPTQGTPSMWPPSDN 180

Query: 236 QAA-SQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ 295
           QAA SQQPRT+ TELPAVAPS S+ A GFPVIGVIDGKFDSGYLVTVT+G+EKLKGVLYQ
Sbjct: 181 QAAMSQQPRTSTTELPAVAPS-SASAAGFPVIGVIDGKFDSGYLVTVTIGSEKLKGVLYQ 240

Query: 296 APSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 355
           +P EQPAQQQVLQP G+FAKDGATS  PNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF
Sbjct: 241 SPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF 300

Query: 356 KEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIEMEDYREKLR 415
            EQHARLKPLYPGKDREISRMIGELWNK+ ES+RTVYQEKAMKDKERYRIEMEDYREKLR
Sbjct: 301 AEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEMEDYREKLR 360

Query: 416 TGQIISDAVPLQQRLPEPDLNMVYADKNDETEGVDSPQSPDNDTSYVEGDSGEYKTEEKE 475
           TGQ+ISDAVPLQQRLPEPDLNMVYADKN+ETEG +SPQ+PD+DTSYVEGDSGEYKTEEK 
Sbjct: 361 TGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGEYKTEEK- 420

Query: 476 EEEEEEEEEEEDSEEDASPHGVGNVDVNILVQEE-HCETRTAEEDVRKESST--VGDNKE 535
                EE+EEEDSEEDASP  VGNVDVN+LV+EE   ETR AEEDVRKESST  VGD KE
Sbjct: 421 -----EEDEEEDSEEDASPQRVGNVDVNVLVEEEGGGETRAAEEDVRKESSTVVVGDEKE 480

Query: 536 VFAGDSVMVEAKEEPE---PEPTTAIRE 557
           VF  DS+M EAKEEPE   P PTTAIRE
Sbjct: 481 VFTRDSLMEEAKEEPEPPPPPPTTAIRE 501

[Close]

BLAST of Lcy01g004170 vs. ExPASy TrEMBL
Match: A0A6J1CAI2 (high mobility group B protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009817 PE=4 SV=1)

HSP 1 Score: 811.2 bits (2094), Expect = 2.6e-231
Identity = 438/515 (85.05%), Postives = 458/515 (88.93%), Query Frame = 0


Query: 56  MVEEERTEAGWGSRKELTMASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDIVANPKIFM 115
           MVEEERTEAGWGSRKELTMASTSF GGK LPVIE SSNCV YPPPQ TYEDI+ NPKIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 116 ASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 175
            SLEKLHS+M TKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 176 ATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMASMLPPSDN 235
           ATNASFVLRKYYLSLLHHFEQI+FFKAVGWTPMISDS  CPS A IP QG  SM PPSDN
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISDSPQCPSPAPIPTQGTPSMWPPSDN 180

Query: 236 QAA-SQQPRTAATELPA-------VAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEK 295
           QAA SQQPRT+ TELPA       VAPS S+ A GFPVIGVIDGKFDSGYLVTVT+G+EK
Sbjct: 181 QAAMSQQPRTSTTELPADSTFLPTVAPS-SASAAGFPVIGVIDGKFDSGYLVTVTIGSEK 240

Query: 296 LKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHPKPNR 355
           LKGVLYQ+P EQPAQQQVLQP G+FAKDGATS  PNAHRRRRRKKSEIKRRDPAHPKPNR
Sbjct: 241 LKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHRRRRRKKSEIKRRDPAHPKPNR 300

Query: 356 SGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIEME 415
           SGYNFFF EQHARLKPLYPGKDREISRMIGELWNK+ ES+RTVYQEKAMKDKERYRIEME
Sbjct: 301 SGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNESDRTVYQEKAMKDKERYRIEME 360

Query: 416 DYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNDETEGVDSPQSPDNDTSYVEGDSGE 475
           DYREKLRTGQ+ISDAVPLQQRLPEPDLNMVYADKN+ETEG +SPQ+PD+DTSYVEGDSGE
Sbjct: 361 DYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDHDTSYVEGDSGE 420

Query: 476 YKTEEKEEEEEEEEEEEEDSEEDASPHGVGNVDVNILVQEE-HCETRTAEEDVRKESST- 535
           YKTEEK      EE+EEEDSEEDASP  VGNVDVN+LV+EE   ETR AEEDVRKESST 
Sbjct: 421 YKTEEK------EEDEEEDSEEDASPQRVGNVDVNVLVEEEGGGETRAAEEDVRKESSTV 480

Query: 536 -VGDNKEVFAGDSVMVEAKEEPE---PEPTTAIRE 557
            VGD KEVF  DS+M EAKEEPE   P PTTAIRE
Sbjct: 481 VVGDEKEVFTRDSLMEEAKEEPEPPPPPPTTAIRE 508

[Close]

BLAST of Lcy01g004170 vs. ExPASy TrEMBL
Match: A0A5A7SQV2 (High mobility group B protein 15 isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G001100 PE=4 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 3.2e-229
Identity = 425/486 (87.45%), Postives = 452/486 (93.00%), Query Frame = 0


Query: 74  MASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDIVANPKIFMASLEKLHSLMATKFMIPI 133
           MASTSFAGGKQLPVIE +SNCVPYPPPQTTYEDI+AN KIFM +LEKLHSLM TKFMIPI
Sbjct: 1   MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 60

Query: 134 IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 193
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYY+SLLHH
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 120

Query: 194 FEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMASMLPPSDNQAASQQPRTAATELPAVA 253
           FEQIYFFKAVGWTP+ SDSSPCPSA+ IP QG+ SMLPPSDNQAAS QPR+ ATELPAV+
Sbjct: 121 FEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDNQAASHQPRSIATELPAVS 180

Query: 254 PSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPAQQQVLQPGGIFA 313
            S +SPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP EQP+Q QVLQP G FA
Sbjct: 181 LSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAFA 240

Query: 314 KDGATSTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFKEQHARLKPLYPGKDREIS 373
           KDG+T TTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFF EQHARLKPLYPGKDREIS
Sbjct: 241 KDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREIS 300

Query: 374 RMIGELWNKVKESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPD 433
           RMIG+LWNK+KESERTVYQEKAMKDKERYRIEM DYREKLRTGQIISDAVPLQQRLPEPD
Sbjct: 301 RMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPD 360

Query: 434 LNMVYADKNDETEGVDSPQSPDNDTSYVEGDSGEYKTEEKEEEEE--EEEEEEEDSEEDA 493
           LNMVY DKN+ETEG +S Q+PD+DTSYVEGDSGEYKTEEK+E+EE  EE+EEE+DSEEDA
Sbjct: 361 LNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKTEEKDEDEEDDEEDEEEDDSEEDA 420

Query: 494 SPHGVGNVDVNILVQEEHCETRTAEEDVRKESSTVGDNKEVFAGDSVMVEAKEEPEPEPT 553
           SP G+GNVDVNILV+EE CETRT  E+VRKESSTVGD KEV AGDSVMVE + + EPEPT
Sbjct: 421 SPQGIGNVDVNILVEEEQCETRTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEEPEPT 480

Query: 554 T-AIRE 557
           T AIRE
Sbjct: 481 TAAIRE 484

[Close]

BLAST of Lcy01g004170 vs. ExPASy TrEMBL
Match: A0A6J1H5J6 (high mobility group B protein 15 OS=Cucurbita moschata OX=3662 GN=LOC111460321 PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 1.0e-222
Identity = 415/484 (85.74%), Postives = 443/484 (91.53%), Query Frame = 0


Query: 74  MASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDIVANPKIFMASLEKLHSLMATKFMIPI 133
           MASTSFAG KQLPVIEA+S+C+PYPPPQTTYEDIVANP IFMASLEKLHS+M TKFMIPI
Sbjct: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60

Query: 134 IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 193
           IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 120

Query: 194 FEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMASMLPPSDNQAASQQPRTAATELPAVA 253
           FEQIYFFKAVGWTP+ISDSSPCPSAATIP QG ASMLPPSDNQAASQ PR+ ATELPAVA
Sbjct: 121 FEQIYFFKAVGWTPIISDSSPCPSAATIPTQGTASMLPPSDNQAASQPPRSTATELPAVA 180

Query: 254 PSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPAQQQVLQPGGIFA 313
           P  +SPAGGFPVIGVIDGKFDSGYL+TVTVGTEKLKGVLYQAPSEQPA     QP G+FA
Sbjct: 181 PGSTSPAGGFPVIGVIDGKFDSGYLITVTVGTEKLKGVLYQAPSEQPA-----QPVGVFA 240

Query: 314 KDGATSTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFKEQHARLKPLYPGKDREIS 373
           KDG    TPNAH+ RRRKKSEI+RRDP HPKPNRSGYNFFF EQHARLKPL+PGKDREIS
Sbjct: 241 KDG----TPNAHQLRRRKKSEIRRRDPGHPKPNRSGYNFFFAEQHARLKPLHPGKDREIS 300

Query: 374 RMIGELWNKVKESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPD 433
           RMIG+LWNK+KESERTVYQEKAMKDKERYR+EMEDYREKLRTGQ+ISDAVPLQQRLPEPD
Sbjct: 301 RMIGDLWNKLKESERTVYQEKAMKDKERYRVEMEDYREKLRTGQVISDAVPLQQRLPEPD 360

Query: 434 LNMVYADKNDETEGVDSPQSPDNDTSYVEGDSGEYKTEEKEEEEEEEEEEEEDSEEDASP 493
           LNMVYADKN+ETE  DSPQ+PDNDTSYVEG+SGEYK E KEE+EEEEEEEE   EEDASP
Sbjct: 361 LNMVYADKNEETEDGDSPQTPDNDTSYVEGNSGEYKMEVKEEDEEEEEEEE---EEDASP 420

Query: 494 HGVGNV-DVNILVQEEHCETRTAEEDVRKESSTVGDNKEVFAGDSVMVEAKEEPEPEPTT 553
            G+  V DVN LV+EE C+T TAEEDVRKESSTVGD+KEV+AG+SVM+E   + EPEPTT
Sbjct: 421 KGIVIVEDVNALVEEEQCKTGTAEEDVRKESSTVGDDKEVYAGESVMMEVDAKEEPEPTT 472

Query: 554 AIRE 557
            IRE
Sbjct: 481 DIRE 472

[Close]

BLAST of Lcy01g004170 vs. NCBI nr
Match: XP_038876011.1 (LOW QUALITY PROTEIN: high mobility group B protein 15-like [Benincasa hispida])

HSP 1 Score: 903.3 bits (2333), Expect = 1.1e-258
Identity = 480/573 (83.77%), Postives = 507/573 (88.48%), Query Frame = 0


Query: 1   MALTALLYHLLFWVFESLPYYWELFPSVQTSQIAY---NLGYINFLDVRYQFS------- 60
           MA+TALLYH LFWVFESLPYYWELF     +       N G     D R +         
Sbjct: 1   MAVTALLYHFLFWVFESLPYYWELFHLFSYNACMLHKRNCGXDFLADWRRRIKGEGFLVF 60

Query: 61  ------KVHWLMVEEERTEAGWGSRKELTMASTSFAGGKQLPVIEASSNCVPYPPPQTTY 120
                 KVHWLM+EEERTEA WG RKELTMASTSFAGGKQLP IE SSNCVPYPPPQTTY
Sbjct: 61  QDKSMYKVHWLMIEEERTEASWGIRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTY 120

Query: 121 EDIVANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWK 180
           +DIVANPKIFM SLEKLHS+M TKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWK
Sbjct: 121 DDIVANPKIFMTSLEKLHSVMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWK 180

Query: 181 EVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPVQ 240
           EVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTP ISDSS CPSAATIP Q
Sbjct: 181 EVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPQISDSSTCPSAATIPTQ 240

Query: 241 GMASMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTVG 300
            M SMLPPS+NQAASQQPR+ ATELPAVAPS +SPAGGFPVIGVIDGKFDSGYLVTVTVG
Sbjct: 241 AMTSMLPPSENQAASQQPRSTATELPAVAPSSTSPAGGFPVIGVIDGKFDSGYLVTVTVG 300

Query: 301 TEKLKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHPK 360
           TEKLKGVLYQAPSEQP++QQVLQ  G FAKD ATSTTPNAHRRRRRKKSEIKRRDPAHPK
Sbjct: 301 TEKLKGVLYQAPSEQPSEQQVLQSVGAFAKDVATSTTPNAHRRRRRKKSEIKRRDPAHPK 360

Query: 361 PNRSGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRI 420
           PNRSGYNFFF EQHARLKPLYPGKDREISRMIG+LWNK+KESERTVYQEKAMKDKERYR+
Sbjct: 361 PNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRV 420

Query: 421 EMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNDETEGVDSPQSPDNDTSYVEGD 480
           EMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKN+ETEG +S Q+PDNDTSYVEGD
Sbjct: 421 EMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGES-QTPDNDTSYVEGD 480

Query: 481 SGEYKTEEKEEEEEEEEEEEEDSEEDASPHGVGNVDVNILVQEEHCETRTAEED-VRKES 540
           SGEYKTEEKEEEEEEEEE+ EDSEEDASP G+GNVDVNIL +EE CET+TAEED VRKES
Sbjct: 481 SGEYKTEEKEEEEEEEEEDSEDSEEDASPQGIGNVDVNILAEEEQCETKTAEEDAVRKES 540

Query: 541 STVGDNKEVFAGDSVMVEAKEEPEPEPTTAIRE 557
           S V D+KEV+AGDSVM+E + + EPEPTT+IRE
Sbjct: 541 SMVRDDKEVYAGDSVMMEVEAKTEPEPTTSIRE 572

[Close]

BLAST of Lcy01g004170 vs. NCBI nr
Match: XP_011649091.1 (high mobility group B protein 15 isoform X2 [Cucumis sativus])

HSP 1 Score: 884.4 bits (2284), Expect = 5.1e-253
Identity = 471/568 (82.92%), Postives = 503/568 (88.56%), Query Frame = 0


Query: 1   MALTALLYHLLFWVFESLPYYWELFPSVQTSQIAYNLGYINFLDVR-------YQFS--- 60
           MA+TALLYHLLFWVFESLPYYW+LF          N G     D R       + FS   
Sbjct: 1   MAMTALLYHLLFWVFESLPYYWKLFHLFSACMSRRNFGKDLLADWRKRIKKEGFLFSRNK 60

Query: 61  ---KVHWLMVEEERTEAGWGSRKELTMASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDI 120
              KVHWLM+EEERTEAGWGSRKELTMASTSFAGGKQLPVIE +SNCVPYPPPQTTYEDI
Sbjct: 61  TICKVHWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDI 120

Query: 121 VANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVT 180
           +AN KIFM +LEKLHSLM TKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVT
Sbjct: 121 IANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVT 180

Query: 181 SVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMA 240
           SVFNFPSTATNASFVLRKYY+SLLHHFEQIYFFKAVGWTP+ SDSSPCPSA+ IP QG+ 
Sbjct: 181 SVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVT 240

Query: 241 SMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEK 300
           SMLPPSDNQAAS QP++ ATELPAV+PS +SP GGFPVIGVIDGKFDSGYLVTVTVGTEK
Sbjct: 241 SMLPPSDNQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEK 300

Query: 301 LKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHPKPNR 360
           LKGVLYQAP EQP+Q QVLQP G FAKDG+T TTPNAHRRRRRKKSEIKRRDPAHPKPNR
Sbjct: 301 LKGVLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNR 360

Query: 361 SGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIEME 420
           SGYNFFF EQHARLKPLYPGKDREISRMIG+LWNK+KESERTVYQEKAMKDKERYRIEM 
Sbjct: 361 SGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMV 420

Query: 421 DYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNDETEGVDSPQSPDNDTSYVEGDSGE 480
           DYREKLRTGQIISDAVPLQQRLPEPDLNMVY DKN+ETEG +S Q+PD+DTSYVEGDSGE
Sbjct: 421 DYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGE 480

Query: 481 YKTEEKEE-EEEEEEEEEEDSEEDASPHGVGNVDVNILVQEEHCETR-TAEEDVRKESST 540
           YKTEEKEE EE++EE+EE+DSEEDASP G+GNVDVNILV+EE CETR T  E+VRKESST
Sbjct: 481 YKTEEKEEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESST 540

Query: 541 VGDNKEVFAGDSVMVEAKEEPEPEPTTA 554
           VGD KEV AGDSVMVE + +  PEPTTA
Sbjct: 541 VGDKKEVLAGDSVMVEVEAKEVPEPTTA 566

[Close]

BLAST of Lcy01g004170 vs. NCBI nr
Match: XP_011649090.1 (high mobility group B protein 15 isoform X1 [Cucumis sativus])

HSP 1 Score: 881.7 bits (2277), Expect = 3.3e-252
Identity = 472/570 (82.81%), Postives = 504/570 (88.42%), Query Frame = 0


Query: 1   MALTALLYHLLFWVFESLPYYWELFP--SVQTSQIAYNLGYINFLDVR-------YQFS- 60
           MA+TALLYHLLFWVFESLPYYW+LF   S        N G     D R       + FS 
Sbjct: 1   MAMTALLYHLLFWVFESLPYYWKLFHLFSYSACMSRRNFGKDLLADWRKRIKKEGFLFSR 60

Query: 61  -----KVHWLMVEEERTEAGWGSRKELTMASTSFAGGKQLPVIEASSNCVPYPPPQTTYE 120
                KVHWLM+EEERTEAGWGSRKELTMASTSFAGGKQLPVIE +SNCVPYPPPQTTYE
Sbjct: 61  NKTICKVHWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYE 120

Query: 121 DIVANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKE 180
           DI+AN KIFM +LEKLHSLM TKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKE
Sbjct: 121 DIIANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKE 180

Query: 181 VTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPVQG 240
           VTSVFNFPSTATNASFVLRKYY+SLLHHFEQIYFFKAVGWTP+ SDSSPCPSA+ IP QG
Sbjct: 181 VTSVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQG 240

Query: 241 MASMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGT 300
           + SMLPPSDNQAAS QP++ ATELPAV+PS +SP GGFPVIGVIDGKFDSGYLVTVTVGT
Sbjct: 241 VTSMLPPSDNQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGT 300

Query: 301 EKLKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHPKP 360
           EKLKGVLYQAP EQP+Q QVLQP G FAKDG+T TTPNAHRRRRRKKSEIKRRDPAHPKP
Sbjct: 301 EKLKGVLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKP 360

Query: 361 NRSGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIE 420
           NRSGYNFFF EQHARLKPLYPGKDREISRMIG+LWNK+KESERTVYQEKAMKDKERYRIE
Sbjct: 361 NRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIE 420

Query: 421 MEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNDETEGVDSPQSPDNDTSYVEGDS 480
           M DYREKLRTGQIISDAVPLQQRLPEPDLNMVY DKN+ETEG +S Q+PD+DTSYVEGDS
Sbjct: 421 MVDYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDS 480

Query: 481 GEYKTEEKEE-EEEEEEEEEEDSEEDASPHGVGNVDVNILVQEEHCETR-TAEEDVRKES 540
           GEYKTEEKEE EE++EE+EE+DSEEDASP G+GNVDVNILV+EE CETR T  E+VRKES
Sbjct: 481 GEYKTEEKEEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKES 540

Query: 541 STVGDNKEVFAGDSVMVEAKEEPEPEPTTA 554
           STVGD KEV AGDSVMVE + +  PEPTTA
Sbjct: 541 STVGDKKEVLAGDSVMVEVEAKEVPEPTTA 568

[Close]

BLAST of Lcy01g004170 vs. NCBI nr
Match: XP_011649092.1 (high mobility group B protein 15 isoform X3 [Cucumis sativus])

HSP 1 Score: 880.6 bits (2274), Expect = 7.3e-252
Identity = 471/568 (82.92%), Postives = 504/568 (88.73%), Query Frame = 0


Query: 1   MALTALLYHLLFWVFESLPYYWELFPSVQTSQIAYNLGYINFLDVR-------YQFS--- 60
           MA+TALLYHLLFWVFESLPYYW+LF   +      N G     D R       + FS   
Sbjct: 1   MAMTALLYHLLFWVFESLPYYWKLFHLFRR-----NFGKDLLADWRKRIKKEGFLFSRNK 60

Query: 61  ---KVHWLMVEEERTEAGWGSRKELTMASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDI 120
              KVHWLM+EEERTEAGWGSRKELTMASTSFAGGKQLPVIE +SNCVPYPPPQTTYEDI
Sbjct: 61  TICKVHWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDI 120

Query: 121 VANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVT 180
           +AN KIFM +LEKLHSLM TKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVT
Sbjct: 121 IANSKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVT 180

Query: 181 SVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMA 240
           SVFNFPSTATNASFVLRKYY+SLLHHFEQIYFFKAVGWTP+ SDSSPCPSA+ IP QG+ 
Sbjct: 181 SVFNFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVT 240

Query: 241 SMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEK 300
           SMLPPSDNQAAS QP++ ATELPAV+PS +SP GGFPVIGVIDGKFDSGYLVTVTVGTEK
Sbjct: 241 SMLPPSDNQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEK 300

Query: 301 LKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHPKPNR 360
           LKGVLYQAP EQP+Q QVLQP G FAKDG+T TTPNAHRRRRRKKSEIKRRDPAHPKPNR
Sbjct: 301 LKGVLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNR 360

Query: 361 SGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIEME 420
           SGYNFFF EQHARLKPLYPGKDREISRMIG+LWNK+KESERTVYQEKAMKDKERYRIEM 
Sbjct: 361 SGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMV 420

Query: 421 DYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNDETEGVDSPQSPDNDTSYVEGDSGE 480
           DYREKLRTGQIISDAVPLQQRLPEPDLNMVY DKN+ETEG +S Q+PD+DTSYVEGDSGE
Sbjct: 421 DYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGE 480

Query: 481 YKTEEKEE-EEEEEEEEEEDSEEDASPHGVGNVDVNILVQEEHCETR-TAEEDVRKESST 540
           YKTEEKEE EE++EE+EE+DSEEDASP G+GNVDVNILV+EE CETR T  E+VRKESST
Sbjct: 481 YKTEEKEEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESST 540

Query: 541 VGDNKEVFAGDSVMVEAKEEPEPEPTTA 554
           VGD KEV AGDSVMVE + +  PEPTTA
Sbjct: 541 VGDKKEVLAGDSVMVEVEAKEVPEPTTA 561

[Close]

BLAST of Lcy01g004170 vs. NCBI nr
Match: XP_011649095.1 (high mobility group B protein 15 isoform X4 [Cucumis sativus] >XP_011649096.1 high mobility group B protein 15 isoform X4 [Cucumis sativus])

HSP 1 Score: 845.5 bits (2183), Expect = 2.6e-241
Identity = 442/505 (87.52%), Postives = 471/505 (93.27%), Query Frame = 0


Query: 51  KVHWLMVEEERTEAGWGSRKELTMASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDIVAN 110
           KVHWLM+EEERTEAGWGSRKELTMASTSFAGGKQLPVIE +SNCVPYPPPQTTYEDI+AN
Sbjct: 33  KVHWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIAN 92

Query: 111 PKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVF 170
            KIFM +LEKLHSLM TKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVF
Sbjct: 93  SKIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVF 152

Query: 171 NFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMASML 230
           NFPSTATNASFVLRKYY+SLLHHFEQIYFFKAVGWTP+ SDSSPCPSA+ IP QG+ SML
Sbjct: 153 NFPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSML 212

Query: 231 PPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKG 290
           PPSDNQAAS QP++ ATELPAV+PS +SP GGFPVIGVIDGKFDSGYLVTVTVGTEKLKG
Sbjct: 213 PPSDNQAASHQPQSTATELPAVSPSSTSPVGGFPVIGVIDGKFDSGYLVTVTVGTEKLKG 272

Query: 291 VLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGY 350
           VLYQAP EQP+Q QVLQP G FAKDG+T TTPNAHRRRRRKKSEIKRRDPAHPKPNRSGY
Sbjct: 273 VLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKPNRSGY 332

Query: 351 NFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIEMEDYR 410
           NFFF EQHARLKPLYPGKDREISRMIG+LWNK+KESERTVYQEKAMKDKERYRIEM DYR
Sbjct: 333 NFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMVDYR 392

Query: 411 EKLRTGQIISDAVPLQQRLPEPDLNMVYADKNDETEGVDSPQSPDNDTSYVEGDSGEYKT 470
           EKLRTGQIISDAVPLQQRLPEPDLNMVY DKN+ETEG +S Q+PD+DTSYVEGDSGEYKT
Sbjct: 393 EKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDSGEYKT 452

Query: 471 EEKEE-EEEEEEEEEEDSEEDASPHGVGNVDVNILVQEEHCETR-TAEEDVRKESSTVGD 530
           EEKEE EE++EE+EE+DSEEDASP G+GNVDVNILV+EE CETR T  E+VRKESSTVGD
Sbjct: 453 EEKEEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVEEEQCETRTTGVENVRKESSTVGD 512

Query: 531 NKEVFAGDSVMVEAKEEPEPEPTTA 554
            KEV AGDSVMVE + +  PEPTTA
Sbjct: 513 KKEVLAGDSVMVEVEAKEVPEPTTA 535

[Close]

BLAST of Lcy01g004170 vs. TAIR 10
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 379.0 bits (972), Expect = 6.5e-105
Identity = 232/430 (53.95%), Postives = 288/430 (66.98%), Query Frame = 0


Query: 74  MASTSFAGGKQLPVIEASSNCVPYPPPQTTYEDIVANPKIFMASLEKLHSLMATKFMIPI 133
           MAS+S      +P+   ++ CV    P+ TYE +VA+P++FM SLE+LHSL+ TKFM+PI
Sbjct: 1   MASSSCLKQGSVPM---NNVCV---TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPI 60

Query: 134 IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 193
           IGG++LDLH+LFVEVTSRGGI K++ ERRWKEVT+ F FP TATNAS+VLRKYY SLL++
Sbjct: 61  IGGRDLDLHKLFVEVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNN 120

Query: 194 FEQIYFFKAVGWTPMISDSSPCPSAATIPVQGMASMLPPSDNQAASQQPRTAATELPAVA 253
           +EQIYFF++ G  P   DS   PSA    +QG  ++ P  + QA +  P+         A
Sbjct: 121 YEQIYFFRSNGQIP--PDSMQSPSARPCFIQG--AIRPSQELQALTFTPQPKIN----TA 180

Query: 254 PSLSSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ-APSEQPAQQQVLQPGGIF 313
             L     G  V+GVIDGKF+SGYLVTVT+G+E+LKGVLYQ  P    + Q   Q  G+ 
Sbjct: 181 EFLGGSLAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVSYQTPQQSHGVL 240

Query: 314 AKDGATSTTPN------AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFKEQHARLKPLYP 373
                 S  P         RRRRRKKSEIKRRDP HPKPNRSGYNFFF EQHARLKPL+P
Sbjct: 241 PNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFAEQHARLKPLHP 300

Query: 374 GKDREISRMIGELWNKVKESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQ 433
           GKDR+ISRMIGELWNK+ E E+ +YQ KAM+DKERYR EMEDYREK + GQ+IS+AVPLQ
Sbjct: 301 GKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKNGQLISNAVPLQ 360

Query: 434 QRLPEPDLNMVYAD-KNDETEGVDSPQSPDNDTSYVEGDSGEYKTEEKEEEEEEEEEEEE 493
           QRLPE +++M  AD   DE E  D            EGDS     E +  +++  E + E
Sbjct: 361 QRLPEQNVDMAEADLPIDEVEEDDE-----------EGDSSGSSGESEPHDDQSIETDPE 405

Query: 494 DSEEDASPHG 496
             E   +P G
Sbjct: 421 LEEPSLNPSG 405

[Close]

BLAST of Lcy01g004170 vs. TAIR 10
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 251.1 bits (640), Expect = 2.0e-66
Identity = 142/320 (44.38%), Postives = 193/320 (60.31%), Query Frame = 0


Query: 97  YPPPQTTYEDIVANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEK 156
           YP P   +E +V +  +F  +L + HS+M+TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 157 VIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPC- 216
           V+ E++W+EV  VF F +T T+ASFVLRK+YL+LL H+EQ++ F A G  P++   +   
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLNLLFHYEQVHLFTARG--PLLHPIATFH 146

Query: 217 PSAATIPVQGMASMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDS 276
            + +T     +    PPS     +  P              S  +  F  IG I+GKFD 
Sbjct: 147 ANPSTSKEMALVEYTPPSIRYHNTHPP--------------SQGSSSFTAIGTIEGKFDC 206

Query: 277 GYLVTVTVGTEKLKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEI 336
           GYLV V +G+E L GVLY +    P+      P  +              RRR  K+   
Sbjct: 207 GYLVKVKLGSEILNGVLYHSAQPGPSS----SPTAVLNNAVVPYVETGRRRRRLGKRRRS 266

Query: 337 KRR-DPAHPKPNRSGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEK 396
           +RR DP +PKPNRSGYNFFF E+H +LK LYP K+RE +++IGE W+ +   ER VYQ+ 
Sbjct: 267 RRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKLIGESWSNLSTEERMVYQDI 326

Query: 397 AMKDKERYRIEMEDYREKLR 415
            +KDKERY+ E+ +YRE LR
Sbjct: 327 GLKDKERYQRELNEYRETLR 326

[Close]

BLAST of Lcy01g004170 vs. TAIR 10
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 240.0 bits (611), Expect = 4.7e-63
Identity = 133/317 (41.96%), Postives = 183/317 (57.73%), Query Frame = 0


Query: 104 YEDIVANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 163
           Y+D+V N  +F   L     L +    +P +GG  LDLHRLF+EVTSRGGIE+V+++R+W
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 164 KEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPV 223
           KEV   F+FP+T T+ASFVLRKYYL  L   E +Y+ +                      
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEK--------------------- 155

Query: 224 QGMASMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTV 283
                  P S  Q+  +  ++ A E P     +  P  G+ V G IDGKFDSGYLVT+ +
Sbjct: 156 -------PVSSLQSTDEALKSLANESPNPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKL 215

Query: 284 GTEKLKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDPAHP 343
           G+++LKGVLY  P      QQ ++           S    + +RR RKKS++   D   P
Sbjct: 216 GSQELKGVLYHIPQTPSQSQQTME---------TPSAIVQSSQRRHRKKSKLAVVDTQKP 275

Query: 344 KPNRSGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERYR 403
           K +RSGYNFFF EQ+ARLKP Y G++R I++ IG +W+ + ESE+ VYQ+K +KD ERYR
Sbjct: 276 KCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYR 315

Query: 404 IEMEDYREKLRTGQIIS 421
           IEM +Y+    +G   S
Sbjct: 336 IEMLEYKSSHESGATAS 315

[Close]

BLAST of Lcy01g004170 vs. TAIR 10
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-46
Identity = 120/320 (37.50%), Postives = 169/320 (52.81%), Query Frame = 0


Query: 104 YEDIVANPKIFMASLEKLHSLMATKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRW 163
           Y+DIV NP++F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EKVI++RR 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRRC 89

Query: 164 KEVTSVFNFPSTATNASFVLRKYYLSLLHHFEQIYFFKAVGWTPMISDSSPCPSAATIPV 223
           KEV   FNF +T TN++FVLRK YL +L  FE +Y+F+A      +S       A  + +
Sbjct: 90  KEVIDAFNFKTTITNSAFVLRKSYLKMLFEFEHLYYFQA-----PLSTFWEKEKALKLLI 149

Query: 224 QGMASMLPPSDNQAASQQPRTAATELPAVAPSLSSPAGGFPVIGVIDGKFDSGYLVTVTV 283
           +  A+     D  +   +P T  T                   G+IDGKF+SGYL++  V
Sbjct: 150 EKSAN----RDKDSQELKPGTVIT-------------------GIIDGKFESGYLISTKV 209

Query: 284 GTEKLKGVLYQAPSEQPAQQQVLQPGGIFAKDGATSTTPNAHRRRRRKKSEIKRRDP-AH 343
           G+EKLKG+LY    E                            +R +KK++  + D    
Sbjct: 210 GSEKLKGMLYHISPE---------------------------TKRGKKKAKSSQGDSHKP 269

Query: 344 PKPNRSGYNFFFKEQHARLKPLYPGKDREISRMIGELWNKVKESERTVYQEKAMKDKERY 403
           PK  R+GYNFF  EQ  R+K    G+     +  G +W  + ES+R VY EK+ +D +RY
Sbjct: 270 PKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLSESDRKVYYEKSREDGKRY 294

Query: 404 RIEMEDYREKL--RTGQIIS 421
           ++E+  YR  +  R  +I++
Sbjct: 330 KMEILQYRSLMESRVAEIVA 294

[Close]

BLAST of Lcy01g004170 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 52.4 bits (124), Expect = 1.4e-06
Identity = 26/82 (31.71%), Postives = 49/82 (59.76%), Query Frame = 0


Query: 330 RKKSEIKRRDPAHPKPNRSGYNFFFKEQHARLKPLYPG-KDREISRMIGELWNKVKESER 389
           ++K   K++DP  PK   SG+ FF + +   +K  +PG    E+ +++G+ W ++   ++
Sbjct: 549 KRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDK 608

Query: 390 TVYQEKAMKDKERYRIEMEDYR 411
             Y+ KA  DK+RY+ E+ DY+
Sbjct: 609 EPYEAKAQVDKQRYKDEISDYK 630

The following BLAST results are available for this feature:

BLAST of Lcy01g004170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAT6	9.1e-104	53.95	High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 ...	[more]
Q9SGS2	2.9e-65	44.38	High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV...	[more]
Q9LTT3	6.6e-62	41.96	High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 ...	[more]
Q9LG02	1.9e-45	37.50	Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMG...	[more]
Q68CP9	3.0e-14	42.05	AT-rich interactive domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ARID2...	[more]

BLAST of Lcy01g004170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL59	5.0e-238	87.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1	[more]
A0A6J1CAX2	2.2e-233	86.22	high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1CAI2	2.6e-231	85.05	high mobility group B protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A5A7SQV2	3.2e-229	87.45	High mobility group B protein 15 isoform X5 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1H5J6	1.0e-222	85.74	high mobility group B protein 15 OS=Cucurbita moschata OX=3662 GN=LOC111460321 P...	[more]

BLAST of Lcy01g004170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876011.1	1.1e-258	83.77	LOW QUALITY PROTEIN: high mobility group B protein 15-like [Benincasa hispida]	[more]
XP_011649091.1	5.1e-253	82.92	high mobility group B protein 15 isoform X2 [Cucumis sativus]	[more]
XP_011649090.1	3.3e-252	82.81	high mobility group B protein 15 isoform X1 [Cucumis sativus]	[more]
XP_011649092.1	7.3e-252	82.92	high mobility group B protein 15 isoform X3 [Cucumis sativus]	[more]
XP_011649095.1	2.6e-241	87.52	high mobility group B protein 15 isoform X4 [Cucumis sativus] >XP_011649096.1 hi...	[more]

BLAST of Lcy01g004170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04880.1	6.5e-105	53.95	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G76110.1	2.0e-66	44.38	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G13350.1	4.7e-63	41.96	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G55650.1	1.4e-46	37.50	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G28730.1	1.4e-06	31.71	high mobility group	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 465..491
None	No IPR available	COILS	Coil	Coil	coord: 392..412
None	No IPR available	SMART	SM01014	ARID_2	coord: 105..195 e-value: 8.2E-30 score: 115.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 469..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 537..557
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 506..527
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 312..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 443..557
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 323..337
None	No IPR available	PANTHER	PTHR46691:SF3	HIGH MOBILITY GROUP B PROTEIN 15	coord: 62..483
None	No IPR available	PANTHER	PTHR46691	HIGH MOBILITY GROUP B PROTEIN 9	coord: 62..483
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 343..407 e-value: 2.6171E-20 score: 82.6757
None	No IPR available	CDD	cd16872	ARID_HMGB9-like	coord: 110..195 e-value: 3.7315E-49 score: 162.819
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 342..411 e-value: 1.1E-17 score: 74.8
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 343..410 e-value: 9.6E-14 score: 51.6
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 343..410 score: 15.248796
IPR001606	ARID DNA-binding domain	SMART	SM00501	bright_3	coord: 109..200 e-value: 3.5E-29 score: 112.9
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 113..195 e-value: 1.0E-16 score: 61.4
IPR001606	ARID DNA-binding domain	PROSITE	PS51011	ARID	coord: 108..199 score: 25.44042
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 327..422 e-value: 4.3E-20 score: 73.9
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 336..415
IPR036431	ARID DNA-binding domain superfamily	GENE3D	1.10.150.60		coord: 101..202 e-value: 1.8E-26 score: 94.1
IPR036431	ARID DNA-binding domain superfamily	SUPERFAMILY	46774	ARID-like	coord: 104..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g004170.1	Lcy01g004170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019760	glucosinolate metabolic process
biological_process	GO:0009846	pollen germination
biological_process	GO:0009860	pollen tube growth
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding