Lcy01g003900 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g003900
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Transmembrane protein
Location	Chr01: 4746221 .. 4747894 (+)
RNA-Seq Expression	Lcy01g003900
Synteny	Lcy01g003900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATCCAAATTATATGGTTCATATCTCAACACTCAAGGTAGCTAGTTAGAAGAGAGCTCACATGAGACATGCCCAGTTTTCAAGACAAATTTTGAAAATAATAATAATAATAAATAAATAAATAAAAGTTTTATGACCAACTTTTTTTTTTTTTTTTCATTGGTTGATTTGAGAAGAAGTAGAACATTCCACGACGCCGTATAGATGAAGGAGGAGCTTAGCTTTAACAGAGAAGCAGAGAGACAAAAACAAAACAAAACGGATAACGTGGCGAAATGAAGGCCTTGCTTCTTCAACCTTGCTCCACTCTTCTTCCTTTTCATCCATGGCGACCCATTCTTCCCAATCACTCTTCTCGCTTTCGTTTCTCCTCTGCAACAACCCACTACCGACCTTGGGACTCCAATGCCGAATCCTTCAGCTCCCAGAAATTCACACGCAGAGACGAAGATCCTGAAGCCGATGACGAACACGACGACCAGCAACGCTTCGACCCCGGCATTCGCTTCCGTACCAGCCGGAAGAAACGGCGGCGTTGGTGGTCCGATGAGCCGGCGCCGGAGTTCGATGAAGAACCTTCCGGGATCTTGGATGAAGTAATCGACAGTGTCTGGATTCTCAAGGTAATCCAATCCAATCCTCTTTGCTTCTGCAAGTTAAATGGGGTTTCGAATTTGAATCGTCCATGGATCCCTTCGATGCTTCTTCGTTCTCTTTCCATTTCCAGCTTCCTGCAATGAGTAATAGTTAGTATAGAGTAAACTGGAAAGTTCAAGGAGAGAATTCAGTTTGCACAACAAGTGTTTGATAAAATTACCGAAAGAATTCTTCTTCTTCTTTGGTTTTCTCTCAACTTTGGCTAATTAATTCATCAGCCAATCTTGGTCAGTGCAGGTATTCAAATCCTACGGTTGGACTCTTCCACCCATAATCTTCTCGCTGTTGTTAAATTCAGGACCAAAAGCTTTTCTGATGGCGTTAGCCCTTCCACTAGGCCAATCAATCATATCTCTGGCATTAGAGAAGTTGTGGGGAACTCCAGAAAGGAGGCCAAGGCGCAGAACCAGAAGTAAAACCAGGAAGAGACCATTTTACAGCACTGAAAGTAGAGTTCAGGAGGAAGAAGAAGAAGAAGCAGCAGCAGCAGAAGGAAGTGTTGGAGGGAAGGGGAAGATGGGCTATGGATATCAGTCATGGGAAGTTGGTAGCAATGGTGGTGAAGTTAGAAAGGAGGGTAGAAGTGGAACAAGTTTTGGTGGATGGGAGGATCTTGATGGAGTTGGATCTGAGAGAAAGGCAAAATCTGGGGTGAGAGGCAAAAAACAGAGCAGTTCATCAATGGAGAGGGGTAAGTTGAGTTGGAGAGAAAAGAAACGTGATACTCCTTTGCTGTTGAGATTGTTAATTGCTGTTTTCCCATTTTTGGGTTCATGGACTAGGATGCTTTAGTTGAATGCTCTTCTAGTCCTCTATACTTCATCAATTTTTACTCACTATTTTGGTTACATAAAACCTCAGCAAATTCCTCATCTTGTTGAGGATAGAATAAGAAGTCAAAAACTATTCTTATGTATAGTGCAAGTCTTTTAATTTAGTGCAGCAGGGTCTATCTTGAGAACCATGTAACTTTACAACTTTGTAGGATGTTTAGTTTTATCCTTAATTGATCTCTAG

mRNA sequence

TAATCCAAATTATATGGTTCATATCTCAACACTCAAGGTAGCTAGTTAGAAGAGAGCTCACATGAGACATGCCCAGTTTTCAAGACAAATTTTGAAAATAATAATAATAATAAATAAATAAATAAAAGTTTTATGACCAACTTTTTTTTTTTTTTTTCATTGGTTGATTTGAGAAGAAGTAGAACATTCCACGACGCCGTATAGATGAAGGAGGAGCTTAGCTTTAACAGAGAAGCAGAGAGACAAAAACAAAACAAAACGGATAACGTGGCGAAATGAAGGCCTTGCTTCTTCAACCTTGCTCCACTCTTCTTCCTTTTCATCCATGGCGACCCATTCTTCCCAATCACTCTTCTCGCTTTCGTTTCTCCTCTGCAACAACCCACTACCGACCTTGGGACTCCAATGCCGAATCCTTCAGCTCCCAGAAATTCACACGCAGAGACGAAGATCCTGAAGCCGATGACGAACACGACGACCAGCAACGCTTCGACCCCGGCATTCGCTTCCGTACCAGCCGGAAGAAACGGCGGCGTTGGTGGTCCGATGAGCCGGCGCCGGAGTTCGATGAAGAACCTTCCGGGATCTTGGATGAAGTAATCGACAGTGTCTGGATTCTCAAGGTATTCAAATCCTACGGTTGGACTCTTCCACCCATAATCTTCTCGCTGTTGTTAAATTCAGGACCAAAAGCTTTTCTGATGGCGTTAGCCCTTCCACTAGGCCAATCAATCATATCTCTGGCATTAGAGAAGTTGTGGGGAACTCCAGAAAGGAGGCCAAGGCGCAGAACCAGAAGTAAAACCAGGAAGAGACCATTTTACAGCACTGAAAGTAGAGTTCAGGAGGAAGAAGAAGAAGAAGCAGCAGCAGCAGAAGGAAGTGTTGGAGGGAAGGGGAAGATGGGCTATGGATATCAGTCATGGGAAGTTGGTAGCAATGGTGGTGAAGTTAGAAAGGAGGGTAGAAGTGGAACAAGTTTTGGTGGATGGGAGGATCTTGATGGAGTTGGATCTGAGAGAAAGGCAAAATCTGGGGTGAGAGGCAAAAAACAGAGCAGTTCATCAATGGAGAGGGGATGTTTAGTTTTATCCTTAATTGATCTCTAG

Coding sequence (CDS)

ATGAAGGCCTTGCTTCTTCAACCTTGCTCCACTCTTCTTCCTTTTCATCCATGGCGACCCATTCTTCCCAATCACTCTTCTCGCTTTCGTTTCTCCTCTGCAACAACCCACTACCGACCTTGGGACTCCAATGCCGAATCCTTCAGCTCCCAGAAATTCACACGCAGAGACGAAGATCCTGAAGCCGATGACGAACACGACGACCAGCAACGCTTCGACCCCGGCATTCGCTTCCGTACCAGCCGGAAGAAACGGCGGCGTTGGTGGTCCGATGAGCCGGCGCCGGAGTTCGATGAAGAACCTTCCGGGATCTTGGATGAAGTAATCGACAGTGTCTGGATTCTCAAGGTATTCAAATCCTACGGTTGGACTCTTCCACCCATAATCTTCTCGCTGTTGTTAAATTCAGGACCAAAAGCTTTTCTGATGGCGTTAGCCCTTCCACTAGGCCAATCAATCATATCTCTGGCATTAGAGAAGTTGTGGGGAACTCCAGAAAGGAGGCCAAGGCGCAGAACCAGAAGTAAAACCAGGAAGAGACCATTTTACAGCACTGAAAGTAGAGTTCAGGAGGAAGAAGAAGAAGAAGCAGCAGCAGCAGAAGGAAGTGTTGGAGGGAAGGGGAAGATGGGCTATGGATATCAGTCATGGGAAGTTGGTAGCAATGGTGGTGAAGTTAGAAAGGAGGGTAGAAGTGGAACAAGTTTTGGTGGATGGGAGGATCTTGATGGAGTTGGATCTGAGAGAAAGGCAAAATCTGGGGTGAGAGGCAAAAAACAGAGCAGTTCATCAATGGAGAGGGGATGTTTAGTTTTATCCTTAATTGATCTCTAG

Protein sequence

MKALLLQPCSTLLPFHPWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDEDPEADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVFKSYGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTRKRPFYSTESRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFGGWEDLDGVGSERKAKSGVRGKKQSSSSMERGCLVLSLIDL

Homology

[Close]

BLAST of Lcy01g003900 vs. ExPASy TrEMBL
Match: A0A6J1HKD0 (uncharacterized protein LOC111464344 OS=Cucurbita moschata OX=3662 GN=LOC111464344 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.0e-106
Identity = 217/274 (79.20%), Postives = 229/274 (83.58%), Query Frame = 0


Query: 1   MKALLLQPCSTLLPFHPWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDEDP 60
           MKALLL P S     HPWR I PNHSSRFRFSSATTHYRPWDSNAESF SQKF RR+ED 
Sbjct: 1   MKALLLHPTSFSFT-HPWRSIFPNHSSRFRFSSATTHYRPWDSNAESFGSQKFRRRNEDE 60

Query: 61  EADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVFKS 120
           EA      QQ FDPGIRF TSRK RRRWWSDEPAPEFDEEPSG+LD+VIDSVWI KVFKS
Sbjct: 61  EA-----AQQGFDPGIRFGTSRKTRRRWWSDEPAPEFDEEPSGVLDDVIDSVWIFKVFKS 120

Query: 121 YGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTRKR 180
           YGW LPPII SLLLNSGPKAFLMALALPLGQSIISLALEKLWG PER+P+RRTR+KTRKR
Sbjct: 121 YGWALPPIIISLLLNSGPKAFLMALALPLGQSIISLALEKLWGAPERKPKRRTRTKTRKR 180

Query: 181 PFYSTE--SRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFGG 240
           PFYSTE   RV+EEEEEE   A+G+  GKGKMGYGYQSWEVGSNGGEVRKE RSGT+FGG
Sbjct: 181 PFYSTERRRRVKEEEEEEEEEAQGNGLGKGKMGYGYQSWEVGSNGGEVRKESRSGTNFGG 240

Query: 241 WEDLDGVGSERKAKSGVRGKKQ--SSSSMERGCL 271
           WEDLDGV      +SGVR KK+  SSSSME G L
Sbjct: 241 WEDLDGV------ESGVRRKKKSSSSSSMENGKL 262

[Close]

BLAST of Lcy01g003900 vs. ExPASy TrEMBL
Match: A0A6J1KDX0 (uncharacterized protein LOC111494773 OS=Cucurbita maxima OX=3661 GN=LOC111494773 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.9e-106
Identity = 217/273 (79.49%), Postives = 229/273 (83.88%), Query Frame = 0


Query: 1   MKALLLQPCSTLLPFHPWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDEDP 60
           MKALLL P S     HPWR I PNHSSRFRFSSATTHYRPWDSNAESF SQKF RR+ED 
Sbjct: 1   MKALLLHPTSFT---HPWRSIFPNHSSRFRFSSATTHYRPWDSNAESFGSQKFRRRNEDE 60

Query: 61  EADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVFKS 120
           EA      QQ FDPGIRF TSRK RRRWWSDEPAPEFDEE SGILD+VIDSVWI KVFKS
Sbjct: 61  EA-----AQQGFDPGIRFGTSRKTRRRWWSDEPAPEFDEESSGILDDVIDSVWIFKVFKS 120

Query: 121 YGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTRKR 180
           YGW LPPII SLLLNSGPKAFLMALALPLGQSIISLALEKLWG PERRP+RRTR+KTRKR
Sbjct: 121 YGWALPPIIISLLLNSGPKAFLMALALPLGQSIISLALEKLWGAPERRPKRRTRTKTRKR 180

Query: 181 PFYSTE-SRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFGGW 240
           PFYSTE  RV+EEEE+E   A+G+  GKGKMGYGYQSWEVG+NGGEVRKE RSGT+FGGW
Sbjct: 181 PFYSTERRRVKEEEEKEEEEAQGNGLGKGKMGYGYQSWEVGNNGGEVRKESRSGTNFGGW 240

Query: 241 EDLDGVGSERKAKSGVRGKKQ--SSSSMERGCL 271
           EDLDGV      +SGVR KK+  SSSSMERG L
Sbjct: 241 EDLDGV------ESGVRRKKKSSSSSSMERGKL 259

[Close]

BLAST of Lcy01g003900 vs. ExPASy TrEMBL
Match: A0A0A0LKI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G165680 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 9.5e-97
Identity = 199/271 (73.43%), Postives = 220/271 (81.18%), Query Frame = 0


Query: 1   MKALLLQPCSTLLPFHPWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDEDP 60
           MKAL   P S   PF PWR      SS FRF+S   HYRP D NAE+F+S  F RRD+  
Sbjct: 1   MKALFPHP-SHPFPF-PWRTF---PSSSFRFTSTLLHYRPPDPNAETFASHNFRRRDQYS 60

Query: 61  EADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVFKS 120
           E D E D+Q  FDPGIRF   RK RRRWWSD+PAPEF+++PSGILDEVIDSVWI KVFKS
Sbjct: 61  EPDFEDDEQPGFDPGIRF---RKNRRRWWSDDPAPEFEDQPSGILDEVIDSVWIFKVFKS 120

Query: 121 YGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTRKR 180
           YGWTLPPII SLLLNSGPKAFLMALALPLGQSII+LALEKLWGTPER+P+RRTRSKTRKR
Sbjct: 121 YGWTLPPIIISLLLNSGPKAFLMALALPLGQSIIALALEKLWGTPERKPKRRTRSKTRKR 180

Query: 181 PFYSTE-SRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFGGW 240
           PFYST  SRVQEEE++E   A G+  G GKMGYGYQSWE+GSNGGEVR EGR+G SFGGW
Sbjct: 181 PFYSTRTSRVQEEEDDEEEVARGNEEGNGKMGYGYQSWELGSNGGEVRNEGRNGNSFGGW 240

Query: 241 EDLDGVGSERKAKSGVRGKKQSSSSMERGCL 271
           EDLDGVG+ERK K GVR KKQSS++ME+G L
Sbjct: 241 EDLDGVGTERKPKPGVRAKKQSSTTMEKGKL 263

[Close]

BLAST of Lcy01g003900 vs. ExPASy TrEMBL
Match: A0A5A7SNV9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00680 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.7e-96
Identity = 197/273 (72.16%), Postives = 219/273 (80.22%), Query Frame = 0


Query: 1   MKALLLQPCSTL-LPFH-PWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDE 60
           MKAL   P      PF  PWR   P+ SS FRF+S   HYRP D NAE+F S  F RR++
Sbjct: 1   MKALFPHPSHPFPFPFPCPWR-TFPSSSSSFRFTSTLLHYRPPDPNAETFGSHNFRRREQ 60

Query: 61  DPEADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVF 120
             E D E D+QQ FDPGIRF   RK RRRWWSD+PAP+F+++PSGILDEVIDSVWI KVF
Sbjct: 61  YSEPDYEDDEQQGFDPGIRF---RKNRRRWWSDDPAPDFEDQPSGILDEVIDSVWIFKVF 120

Query: 121 KSYGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTR 180
           KSYGWTLPPII SLLLNSGPKAFLMALALPLGQSII+LALEKLWG PER+P+RRTRSKTR
Sbjct: 121 KSYGWTLPPIIISLLLNSGPKAFLMALALPLGQSIIALALEKLWGIPERKPKRRTRSKTR 180

Query: 181 KRPFYSTE-SRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFG 240
           KRPFYST  SRVQEEE++E   A G+  G GKMGYGYQSWEVGSNGGEVR  GR+G SFG
Sbjct: 181 KRPFYSTRTSRVQEEEDDEEEVARGNGEGNGKMGYGYQSWEVGSNGGEVRSGGRNGNSFG 240

Query: 241 GWEDLDGVGSERKAKSGVRGKKQSSSSMERGCL 271
           GWEDLDGVG+ERK K GVR KKQSS++ME+G L
Sbjct: 241 GWEDLDGVGTERKPKPGVRAKKQSSTTMEKGKL 269

[Close]

BLAST of Lcy01g003900 vs. ExPASy TrEMBL
Match: A0A1S3CD27 (uncharacterized protein LOC103499480 OS=Cucumis melo OX=3656 GN=LOC103499480 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.7e-96
Identity = 197/273 (72.16%), Postives = 219/273 (80.22%), Query Frame = 0


Query: 1   MKALLLQPCSTL-LPFH-PWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDE 60
           MKAL   P      PF  PWR   P+ SS FRF+S   HYRP D NAE+F S  F RR++
Sbjct: 1   MKALFPHPSHPFPFPFPCPWR-TFPSSSSSFRFTSTLLHYRPPDPNAETFGSHNFRRREQ 60

Query: 61  DPEADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVF 120
             E D E D+QQ FDPGIRF   RK RRRWWSD+PAP+F+++PSGILDEVIDSVWI KVF
Sbjct: 61  YSEPDYEDDEQQGFDPGIRF---RKNRRRWWSDDPAPDFEDQPSGILDEVIDSVWIFKVF 120

Query: 121 KSYGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTR 180
           KSYGWTLPPII SLLLNSGPKAFLMALALPLGQSII+LALEKLWG PER+P+RRTRSKTR
Sbjct: 121 KSYGWTLPPIIISLLLNSGPKAFLMALALPLGQSIIALALEKLWGIPERKPKRRTRSKTR 180

Query: 181 KRPFYSTE-SRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFG 240
           KRPFYST  SRVQEEE++E   A G+  G GKMGYGYQSWEVGSNGGEVR  GR+G SFG
Sbjct: 181 KRPFYSTRTSRVQEEEDDEEEVARGNGEGNGKMGYGYQSWEVGSNGGEVRSGGRNGNSFG 240

Query: 241 GWEDLDGVGSERKAKSGVRGKKQSSSSMERGCL 271
           GWEDLDGVG+ERK K GVR KKQSS++ME+G L
Sbjct: 241 GWEDLDGVGTERKPKPGVRAKKQSSTTMEKGKL 269

[Close]

BLAST of Lcy01g003900 vs. NCBI nr
Match: KAG6593799.1 (hypothetical protein SDJN03_13275, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 397.9 bits (1021), Expect = 7.2e-107
Identity = 216/273 (79.12%), Postives = 228/273 (83.52%), Query Frame = 0


Query: 1   MKALLLQPCSTLLPF-HPWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDED 60
           MKALLL P S    F HPWR I PNHSSRFRFSSATTHYRPWDSNAESF SQKF RR+ED
Sbjct: 1   MKALLLHPTSFSFSFTHPWRSIFPNHSSRFRFSSATTHYRPWDSNAESFGSQKFRRRNED 60

Query: 61  PEADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVFK 120
            EA      QQ FDPGIRF TSRK RRRWWSDEPAPEFDEEPSG+LD+VIDSVWI KVFK
Sbjct: 61  EEA-----AQQGFDPGIRFGTSRKTRRRWWSDEPAPEFDEEPSGVLDDVIDSVWIFKVFK 120

Query: 121 SYGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTRK 180
           SYGW LPPII SLLLNSGPKAFLMALALPLGQSIISLALEKLWG PERRP+RRTR+KTRK
Sbjct: 121 SYGWALPPIIISLLLNSGPKAFLMALALPLGQSIISLALEKLWGAPERRPKRRTRTKTRK 180

Query: 181 RPFYSTESRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFGGW 240
           RPFYSTE R  +EEEEE   A+G+  GKGKMGYGYQSWEVG+NGGEVRKE RSGT+FGGW
Sbjct: 181 RPFYSTERRRVKEEEEEEEEAQGNGLGKGKMGYGYQSWEVGNNGGEVRKESRSGTNFGGW 240

Query: 241 EDLDGVGSERKAKSGVRGKKQ--SSSSMERGCL 271
           EDLDGV      +SGVR KK+  SSSSME G L
Sbjct: 241 EDLDGV------ESGVRRKKKSSSSSSMESGKL 262

[Close]

BLAST of Lcy01g003900 vs. NCBI nr
Match: KAG7026129.1 (hypothetical protein SDJN02_12628 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 396.7 bits (1018), Expect = 1.6e-106
Identity = 215/273 (78.75%), Postives = 227/273 (83.15%), Query Frame = 0


Query: 1   MKALLLQPCSTLLPF-HPWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDED 60
           MKALLL P S    F HPWR I PNHSSRFRFSSATTHYRPWDSNAESF SQKF RR+ED
Sbjct: 1   MKALLLHPTSFSFSFTHPWRSIFPNHSSRFRFSSATTHYRPWDSNAESFGSQKFRRRNED 60

Query: 61  PEADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVFK 120
            EA      QQ FDPGIRF TSRK RRRWWSDEPAPEFDEEPSG+LD+VIDSVWI KVFK
Sbjct: 61  EEA-----AQQGFDPGIRFGTSRKTRRRWWSDEPAPEFDEEPSGVLDDVIDSVWIFKVFK 120

Query: 121 SYGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTRK 180
           SYGW LPPII SLLLNSGPKAFLMALA PLGQSIISLALEKLWG PERRP+RRTR+KTRK
Sbjct: 121 SYGWALPPIIISLLLNSGPKAFLMALAFPLGQSIISLALEKLWGAPERRPKRRTRTKTRK 180

Query: 181 RPFYSTESRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFGGW 240
           RPFYSTE R  +EEEEE   A+G+  GKGKMGYGYQSWEVG+NGGEVRKE RSGT+FGGW
Sbjct: 181 RPFYSTERRRVKEEEEEEEEAQGNGLGKGKMGYGYQSWEVGNNGGEVRKESRSGTNFGGW 240

Query: 241 EDLDGVGSERKAKSGVRGKKQ--SSSSMERGCL 271
           EDLDGV      +SGVR KK+  SSSSME G L
Sbjct: 241 EDLDGV------ESGVRRKKKSSSSSSMENGKL 262

[Close]

BLAST of Lcy01g003900 vs. NCBI nr
Match: XP_022964280.1 (uncharacterized protein LOC111464344 [Cucurbita moschata])

HSP 1 Score: 396.4 bits (1017), Expect = 2.1e-106
Identity = 217/274 (79.20%), Postives = 229/274 (83.58%), Query Frame = 0


Query: 1   MKALLLQPCSTLLPFHPWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDEDP 60
           MKALLL P S     HPWR I PNHSSRFRFSSATTHYRPWDSNAESF SQKF RR+ED 
Sbjct: 1   MKALLLHPTSFSFT-HPWRSIFPNHSSRFRFSSATTHYRPWDSNAESFGSQKFRRRNEDE 60

Query: 61  EADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVFKS 120
           EA      QQ FDPGIRF TSRK RRRWWSDEPAPEFDEEPSG+LD+VIDSVWI KVFKS
Sbjct: 61  EA-----AQQGFDPGIRFGTSRKTRRRWWSDEPAPEFDEEPSGVLDDVIDSVWIFKVFKS 120

Query: 121 YGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTRKR 180
           YGW LPPII SLLLNSGPKAFLMALALPLGQSIISLALEKLWG PER+P+RRTR+KTRKR
Sbjct: 121 YGWALPPIIISLLLNSGPKAFLMALALPLGQSIISLALEKLWGAPERKPKRRTRTKTRKR 180

Query: 181 PFYSTE--SRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFGG 240
           PFYSTE   RV+EEEEEE   A+G+  GKGKMGYGYQSWEVGSNGGEVRKE RSGT+FGG
Sbjct: 181 PFYSTERRRRVKEEEEEEEEEAQGNGLGKGKMGYGYQSWEVGSNGGEVRKESRSGTNFGG 240

Query: 241 WEDLDGVGSERKAKSGVRGKKQ--SSSSMERGCL 271
           WEDLDGV      +SGVR KK+  SSSSME G L
Sbjct: 241 WEDLDGV------ESGVRRKKKSSSSSSMENGKL 262

[Close]

BLAST of Lcy01g003900 vs. NCBI nr
Match: XP_023514400.1 (uncharacterized protein LOC111778674 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 394.8 bits (1013), Expect = 6.1e-106
Identity = 213/273 (78.02%), Postives = 224/273 (82.05%), Query Frame = 0


Query: 1   MKALLLQPCSTLLPF---HPWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRD 60
           MKALLL P S    F   HPWR I PNHSSRFRFSSATTHYRPWDSNAESF SQKF RR+
Sbjct: 1   MKALLLHPTSFSFSFSFTHPWRSIFPNHSSRFRFSSATTHYRPWDSNAESFGSQKFRRRN 60

Query: 61  EDPEADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKV 120
           ED EA      QQ FDPGIRF TSRK RRRWWSDEPAPEFDEEPSG+LD+VIDSVWI KV
Sbjct: 61  EDEEA-----AQQGFDPGIRFGTSRKTRRRWWSDEPAPEFDEEPSGVLDDVIDSVWIFKV 120

Query: 121 FKSYGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKT 180
           FKSYGW LPPII SLLLNSGPKAFLMALALPLGQSIISLALEKLWG PERRP+RRTR+KT
Sbjct: 121 FKSYGWALPPIIISLLLNSGPKAFLMALALPLGQSIISLALEKLWGAPERRPKRRTRTKT 180

Query: 181 RKRPFYSTESRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFG 240
           RKRPFY+TE R  +EEEEE   A+G+  GKGKMGYGYQSWEVGSNGGEVRKE RSGT+FG
Sbjct: 181 RKRPFYNTERRRVKEEEEEEEEAQGNGLGKGKMGYGYQSWEVGSNGGEVRKESRSGTNFG 240

Query: 241 GWEDLDGVGSERKAKSGVRGKKQSSSSMERGCL 271
           GWEDLDGV S  + K     K  SSSSME G L
Sbjct: 241 GWEDLDGVESGARRKK----KSSSSSSMESGKL 264

[Close]

BLAST of Lcy01g003900 vs. NCBI nr
Match: XP_023000532.1 (uncharacterized protein LOC111494773 [Cucurbita maxima])

HSP 1 Score: 394.8 bits (1013), Expect = 6.1e-106
Identity = 217/273 (79.49%), Postives = 229/273 (83.88%), Query Frame = 0


Query: 1   MKALLLQPCSTLLPFHPWRPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFTRRDEDP 60
           MKALLL P S     HPWR I PNHSSRFRFSSATTHYRPWDSNAESF SQKF RR+ED 
Sbjct: 1   MKALLLHPTSFT---HPWRSIFPNHSSRFRFSSATTHYRPWDSNAESFGSQKFRRRNEDE 60

Query: 61  EADDEHDDQQRFDPGIRFRTSRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVFKS 120
           EA      QQ FDPGIRF TSRK RRRWWSDEPAPEFDEE SGILD+VIDSVWI KVFKS
Sbjct: 61  EA-----AQQGFDPGIRFGTSRKTRRRWWSDEPAPEFDEESSGILDDVIDSVWIFKVFKS 120

Query: 121 YGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTRKR 180
           YGW LPPII SLLLNSGPKAFLMALALPLGQSIISLALEKLWG PERRP+RRTR+KTRKR
Sbjct: 121 YGWALPPIIISLLLNSGPKAFLMALALPLGQSIISLALEKLWGAPERRPKRRTRTKTRKR 180

Query: 181 PFYSTE-SRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFGGW 240
           PFYSTE  RV+EEEE+E   A+G+  GKGKMGYGYQSWEVG+NGGEVRKE RSGT+FGGW
Sbjct: 181 PFYSTERRRVKEEEEKEEEEAQGNGLGKGKMGYGYQSWEVGNNGGEVRKESRSGTNFGGW 240

Query: 241 EDLDGVGSERKAKSGVRGKKQ--SSSSMERGCL 271
           EDLDGV      +SGVR KK+  SSSSMERG L
Sbjct: 241 EDLDGV------ESGVRRKKKSSSSSSMERGKL 259

[Close]

BLAST of Lcy01g003900 vs. TAIR 10
Match: AT3G04310.1 (unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 82.8 bits (203), Expect = 4.8e-16
Identity = 62/183 (33.88%), Postives = 93/183 (50.82%), Query Frame = 0


Query: 81  SRKKRRRWWSDEPAPEFDEEPSGILDEVIDSVWILKVFKSYGWTLPPIIFSLLLNSGPKA 140
           +RKK+R WW D+   + D+    + +E  D   + +VF++  W L PI  SLLL +   A
Sbjct: 64  NRKKKRPWWLDDDDDD-DDNDDWMNEEEEDWSMVFEVFRTLSWMLAPIGISLLLGTDSNA 123

Query: 141 FLMALALPLGQSIISLALEKLWGTPERRPRRRTRSKTRKRPFYSTESRVQEEEEEEAAAA 200
            +MALA+PL QS++SL + K+W  P  R  +R+R  T     +S  + V      +A   
Sbjct: 124 GVMALAVPLVQSVLSLVVSKVWSRPSIRSMKRSRRDT-----FSRSASVSSGRTRKARQG 183

Query: 201 EGSVGGKGKMGYGYQSWEVGSNGGEVRKEGRSGTSFGGWEDLD---GVGSERKAKSGVRG 260
               GG  K   GY+SW VG +          GT +GGW+DLD    + ++      VR 
Sbjct: 184 GNMRGGVDK--GGYKSWIVGDD-----DSNSMGTGYGGWDDLDTLREIRNDNPLNENVRP 233

[Close]

BLAST of Lcy01g003900 vs. TAIR 10
Match: AT2G33250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G04310.1); Has 41 Blast hits to 41 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.9 bits (198), Expect = 1.8e-15
Identity = 87/289 (30.10%), Postives = 130/289 (44.98%), Query Frame = 0


Query: 3   ALLLQPCSTLLPF---HPW-----RPILPNHSSRFRFSSATTHYRPWDSNAESFSSQKFT 62
           AL L   ST L F   H W     R   P+ S    FSS+        S   S    +  
Sbjct: 6   ALSLPRASTYLSFSNLHVWRFHNPRSYPPSRSQLLCFSSSC-------SRVTSAKIIQLN 65

Query: 63  RRDEDPEADDEHDDQQRFDPGIRFRTSRKKRRRW---WSDEPAPEFDEEPSG-------- 122
           RR    +     DD + +    R +  RK+R  W   + D    + DE+  G        
Sbjct: 66  RRRFSYKICAAADDGRGYRLTERGKRGRKRRELWEELFEDNVEDDDDEDDGGGGIGSANF 125

Query: 123 ----ILDEVIDSVWILKVFKSYGWTLPPIIFSLLLNSGPKAFLMALALPLGQSIISLALE 182
               IL+E++D+VWILK FKSYG+ LP II SL  ++GPKAFL++LA+ +G S++  A +
Sbjct: 126 DLWKILEEIVDNVWILKAFKSYGYLLPFIILSLFFSTGPKAFLVSLAVAIGPSLLFYAFQ 185

Query: 183 KLWGTPERRPRRRTRSKTRKRPFYSTESRVQEEEEEEAAAAEGSVGGKGKMGYGYQSWEV 242
           KL G  +RR               + +  ++EEEEE   ++        ++ Y   +   
Sbjct: 186 KLIGWDKRRGTS-----------IANQFGIEEEEEEVERSS-------SRIRYNPSTVRN 245

Query: 243 GSNG-GEVRKEGRSGTSFGGWEDLDGVGSERKAKSGVRGKKQSSSSMER 268
             NG G  R      + FGGW++LDG+G+    +     KK+     +R
Sbjct: 246 NVNGRGVNRSSAGMASKFGGWDELDGLGTTIPERPTSEPKKKPLPKRKR 269

The following BLAST results are available for this feature:

BLAST of Lcy01g003900 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g003900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKD0	1.0e-106	79.20	uncharacterized protein LOC111464344 OS=Cucurbita moschata OX=3662 GN=LOC1114643...	[more]
A0A6J1KDX0	2.9e-106	79.49	uncharacterized protein LOC111494773 OS=Cucurbita maxima OX=3661 GN=LOC111494773...	[more]
A0A0A0LKI3	9.5e-97	73.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G165680 PE=4 SV=1	[more]
A0A5A7SNV9	4.7e-96	72.16	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CD27	4.7e-96	72.16	uncharacterized protein LOC103499480 OS=Cucumis melo OX=3656 GN=LOC103499480 PE=...	[more]

BLAST of Lcy01g003900 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593799.1	7.2e-107	79.12	hypothetical protein SDJN03_13275, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7026129.1	1.6e-106	78.75	hypothetical protein SDJN02_12628 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022964280.1	2.1e-106	79.20	uncharacterized protein LOC111464344 [Cucurbita moschata]	[more]
XP_023514400.1	6.1e-106	78.02	uncharacterized protein LOC111778674 [Cucurbita pepo subsp. pepo]	[more]
XP_023000532.1	6.1e-106	79.49	uncharacterized protein LOC111494773 [Cucurbita maxima]	[more]

BLAST of Lcy01g003900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04310.1	4.8e-16	33.88	unknown protein; Has 44 Blast hits to 44 proteins in 12 species: Archae - 0; Bac...	[more]
AT2G33250.1	1.8e-15	30.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..75
None	No IPR available	PANTHER	PTHR35719:SF2	OS01G0680600 PROTEIN	coord: 19..268
None	No IPR available	PANTHER	PTHR35719	OS01G0680600 PROTEIN	coord: 19..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g003900.1	Lcy01g003900.1	mRNA