Lcy01g003110 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g003110
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr01: 3697549 .. 3698576 (-)
RNA-Seq Expression	Lcy01g003110
Synteny	Lcy01g003110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAACATTTAACACGTCATTTAATTATATAATATTTTATTCTATGGACCCACACCATTCTTAAATGTTTCTTTAATGACAAACAAATGAATAAAGGTAGTACGAAAAATTTTCCAATACTACGGTAGTACTAGAAATTTTTCGCCTTAGTTTTTTGATTTTCCCTTTGTTGTTCGTCTTGTTTATGGCGCGTGTGACAACTATGCGCCAGTTATTGGAAGCCCCAACTGGAGCACTCAGATCGTGCTTCCCACATGCTCCCTTGTCCCCTATAATTACCCCTCTCTTCTTCTTCTTCCTCTTCCTCCTTATCAATAATCCCCAATTCCTTCTCTCTTTCTAATCCCTTCATTCATTCCATGGCCGACTCACAGAGACGAACCTCCGCCACCGCCGCTTCACGCCGCCACCAACAGCAACCCAGCCGTCTCCAGCGTCGGGCTCCTGCCTCTCTCCAAATCAACCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTATCGCCACTCGTCTCTCCATCCTCGCCCAACGACATCCAAAATCGCACGCTCGATTCAGGATCCACTTCTTCTTCTTCCTCTCAGCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCCTTTCACTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTTTAGGTTCCTTTTTTCTTTTTTTTTTTAAAATAAACTCGACTTGGATCTGTAATCAGAAGAATTTGTAGCCTGTAGATCTAACGGTCTGTTTTTGACGAGCTTATCGATTTCATCTTATGCTTAACCACACTCGATTATTTGTACACATTCTTTGACTATTTTTTTCCCTGCTACTAATATTATATTATTTGCTCACATCACTCTAACGTTTAGATTGAAGTGACATTTATTAACTTAAATAATTTATATAGTAAATTAAGCAATAATTTAAGCTGTAATGTGGAGTAGTAGTACGACGGCATTTCGATTTTTCCTCTAATTTGGTTATTTA

mRNA sequence

TCAACATTTAACACGTCATTTAATTATATAATATTTTATTCTATGGACCCACACCATTCTTAAATGTTTCTTTAATGACAAACAAATGAATAAAGGTAGTACGAAAAATTTTCCAATACTACGGTAGTACTAGAAATTTTTCGCCTTAGTTTTTTGATTTTCCCTTTGTTGTTCGTCTTGTTTATGGCGCGTGTGACAACTATGCGCCAGTTATTGGAAGCCCCAACTGGAGCACTCAGATCGTGCTTCCCACATGCTCCCTTGTCCCCTATAATTACCCCTCTCTTCTTCTTCTTCCTCTTCCTCCTTATCAATAATCCCCAATTCCTTCTCTCTTTCTAATCCCTTCATTCATTCCATGGCCGACTCACAGAGACGAACCTCCGCCACCGCCGCTTCACGCCGCCACCAACAGCAACCCAGCCGTCTCCAGCGTCGGGCTCCTGCCTCTCTCCAAATCAACCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTATCGCCACTCGTCTCTCCATCCTCGCCCAACGACATCCAAAATCGCACGCTCGATTCAGGATCCACTTCTTCTTCTTCCTCTCAGCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCCTTTCACTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTTTAGGTTCCTTTTTTCTTTTTTTTTTTAAAATAAACTCGACTTGGATCTGTAATCAGAAGAATTTGTAGCCTGTAGATCTAACGGTCTGTTTTTGACGAGCTTATCGATTTCATCTTATGCTTAACCACACTCGATTATTTGTACACATTCTTTGACTATTTTTTTCCCTGCTACTAATATTATATTATTTGCTCACATCACTCTAACGTTTAGATTGAAGTGACATTTATTAACTTAAATAATTTATATAGTAAATTAAGCAATAATTTAAGCTGTAATGTGGAGTAGTAGTACGACGGCATTTCGATTTTTCCTCTAATTTGGTTATTTA

Coding sequence (CDS)

ATGGCCGACTCACAGAGACGAACCTCCGCCACCGCCGCTTCACGCCGCCACCAACAGCAACCCAGCCGTCTCCAGCGTCGGGCTCCTGCCTCTCTCCAAATCAACCGCTCCGATTGGAAGGTCGCCATCCCTCTCTTATCGCCACTCGTCTCTCCATCCTCGCCCAACGACATCCAAAATCGCACGCTCGATTCAGGATCCACTTCTTCTTCTTCCTCTCAGCATCATCATCATAAAGAATCGGAGCCGGAGAAGCCGCCGGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCCTTTCACTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTTTAG

Protein sequence

MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV

Homology

[Close]

BLAST of Lcy01g003110 vs. ExPASy Swiss-Prot
Match: Q6NN02 (Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g14450 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-09
Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPNDI 60
           MA + +RTS++AAS  +++Q S+LQRRAP+ +    + S+W VAIPLLSPL +PS  +  
Sbjct: 19  MASTMQRTSSSAAS--NERQLSQLQRRAPSLMIKPTSFSNWNVAIPLLSPL-APSLTS-- 78

Query: 61  QNRTLDSGSTSSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 114
              + D        ++     E E +K PVFKKWQHPA+PF Y+     P F+ V
Sbjct: 79  ---SFDQSHVPPPQNKTEIPVEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

[Close]

BLAST of Lcy01g003110 vs. ExPASy TrEMBL
Match: A0A6J1ER11 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111436912 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39
Identity = 97/116 (83.62%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPNDIQN 60
           MA+SQRR S TAA    +QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQN
Sbjct: 1   MAESQRRPSGTAA---RKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQN 60

Query: 61  RTLDSGSTSSSSS--QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 114
            T DSGS SSSSS   HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  WTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 113

[Close]

BLAST of Lcy01g003110 vs. ExPASy TrEMBL
Match: A0A6J1KKB8 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111494801 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.3e-39
Identity = 96/118 (81.36%), Postives = 100/118 (84.75%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPNDIQN 60
           MA+SQRR S  AA    +QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQN
Sbjct: 1   MAESQRRASGAAA---RKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQN 60

Query: 61  RTLDSGSTSSSSS----QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 114
            T DSGS SSSSS     HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  WTADSGSISSSSSHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 115

[Close]

BLAST of Lcy01g003110 vs. ExPASy TrEMBL
Match: A0A1S3CDB1 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103499403 PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.2e-37
Identity = 97/129 (75.19%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPNDIQN 60
           MADS RRTS T  + RH QQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSP DIQN
Sbjct: 1   MADSHRRTSPT--TTRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQN 60

Query: 61  RTLDS------GSTSSSSSQHH----------HHKESEPEKPPVFKKWQHPAAPFHYDSG 114
            T DS       S+SSSSS HH          HHKE E EK PVFKKWQHPAAPFHYDSG
Sbjct: 61  WTPDSREASSASSSSSSSSHHHHHHHQHHQHQHHKEPEAEKAPVFKKWQHPAAPFHYDSG 120

[Close]

BLAST of Lcy01g003110 vs. ExPASy TrEMBL
Match: A0A6J1H320 (uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111459957 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.8e-31
Identity = 84/116 (72.41%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 1   MADSQRRTSATA-ASRRH---QQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPN 60
           MADS RRTS  A ASRRH   QQQP   + RAPASLQINR DWKVAIPLL+PLVSPSSP 
Sbjct: 37  MADSHRRTSTPAGASRRHPPPQQQPGCFRSRAPASLQINRPDWKVAIPLLTPLVSPSSPK 96

Query: 61  DIQNRTLDSGSTSSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVP 113
           +IQ    +SG  SS+SS   +HKESEPEKPPVFKKWQHPAAPF YDSGP  PRF+P
Sbjct: 97  EIQTWAPNSGEGSSNSS---NHKESEPEKPPVFKKWQHPAAPFQYDSGPMDPRFIP 149

[Close]

BLAST of Lcy01g003110 vs. ExPASy TrEMBL
Match: A0A0A0LLJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.2e-31
Identity = 89/125 (71.20%), Postives = 92/125 (73.60%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSP-SSPNDIQ 60
           MADS   TS  A        PSRLQRRAPASLQINRSDWKVAIPLLSPLVSP SSP DI 
Sbjct: 1   MADSHPPTSPAAT-------PSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSSPKDIH 60

Query: 61  N-RTLDS---GSTSSSSS-------QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAP 114
           +  T DS    ST+SSSS        HHHHKES+PEK PVFKKWQHPAAPFHYDSG RAP
Sbjct: 61  SWSTPDSRQPSSTTSSSSHHHHLLHHHHHHKESDPEKAPVFKKWQHPAAPFHYDSGARAP 118

[Close]

BLAST of Lcy01g003110 vs. NCBI nr
Match: XP_038875425.1 (uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 188.3 bits (477), Expect = 3.5e-44
Identity = 101/113 (89.38%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPNDIQN 60
           MADS RRTS   AS RH QQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSP DIQN
Sbjct: 1   MADSHRRTS--GASGRHPQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPKDIQN 60

Query: 61  RTLDSGSTSSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 114
            T DS   SSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV
Sbjct: 61  WTPDSREASSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 111

[Close]

BLAST of Lcy01g003110 vs. NCBI nr
Match: XP_022930471.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 172.2 bits (435), Expect = 2.6e-39
Identity = 97/116 (83.62%), Postives = 101/116 (87.07%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPNDIQN 60
           MA+SQRR S TAA    +QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQN
Sbjct: 1   MAESQRRPSGTAA---RKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQN 60

Query: 61  RTLDSGSTSSSSS--QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 114
            T DSGS SSSSS   HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  WTADSGSISSSSSHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 113

[Close]

BLAST of Lcy01g003110 vs. NCBI nr
Match: KAG6593848.1 (putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026180.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 171.0 bits (432), Expect = 5.8e-39
Identity = 97/119 (81.51%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPNDIQN 60
           MA+SQRR S TAA    +QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQN
Sbjct: 1   MAESQRRPSGTAA---RKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQN 60

Query: 61  RTLDSGSTSSSSS-----QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 114
            T DSGS SSSSS      HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  WTADSGSISSSSSHHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 116

[Close]

BLAST of Lcy01g003110 vs. NCBI nr
Match: XP_023000559.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 169.9 bits (429), Expect = 1.3e-38
Identity = 96/118 (81.36%), Postives = 100/118 (84.75%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPNDIQN 60
           MA+SQRR S  AA    +QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQN
Sbjct: 1   MAESQRRASGAAA---RKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQN 60

Query: 61  RTLDSGSTSSSSS----QHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 114
            T DSGS SSSSS     HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  WTADSGSISSSSSHHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 115

[Close]

BLAST of Lcy01g003110 vs. NCBI nr
Match: XP_023515028.1 (uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 167.9 bits (424), Expect = 4.9e-38
Identity = 94/115 (81.74%), Postives = 100/115 (86.96%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQINRSDWKVAIPLLSPLVSPSSPNDIQN 60
           MA+SQRR SATA+    +QQPSRLQRRAPASLQI+RSDWKVAIPLLSPLVSPSSP +IQN
Sbjct: 1   MAESQRRPSATAS---RKQQPSRLQRRAPASLQISRSDWKVAIPLLSPLVSPSSPTEIQN 60

Query: 61  RTLDSGSTSSS-SSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPR-FVPV 114
            T DSG+ SSS    HHHHKESEPEKPPVFKKWQHPAAPFHYDSG RAPR FVPV
Sbjct: 61  WTADSGAISSSHHHHHHHHKESEPEKPPVFKKWQHPAAPFHYDSGSRAPRAFVPV 112

[Close]

BLAST of Lcy01g003110 vs. TAIR 10
Match: AT1G04330.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11
Identity = 46/101 (45.54%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 8   TSATAASRRHQQQPSRLQRRAPASLQIN--RSDWKVAIPLLSPLVS-PSSPNDIQNRTLD 67
           ++A   S    ++ SRLQRRAP  L+IN   ++WKVAIPLLSP  S P  P  +  R   
Sbjct: 3   STARNISGSGNRKSSRLQRRAPPPLKINPCEANWKVAIPLLSPTESPPQKPPAVMKR--- 62

Query: 68  SGSTSSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGP 106
                            E EKPPVFKKWQHPAAPF+Y   P
Sbjct: 63  ----------EEQRWGKEAEKPPVFKKWQHPAAPFYYQPAP 90

[Close]

BLAST of Lcy01g003110 vs. TAIR 10
Match: AT4G14450.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23170.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 7.1e-11
Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASL--QINRSDWKVAIPLLSPLVSPSSPNDI 60
           MA + +RTS++AAS  +++Q S+LQRRAP+ +    + S+W VAIPLLSPL +PS  +  
Sbjct: 19  MASTMQRTSSSAAS--NERQLSQLQRRAPSLMIKPTSFSNWNVAIPLLSPL-APSLTS-- 78

Query: 61  QNRTLDSGSTSSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 114
              + D        ++     E E +K PVFKKWQHPA+PF Y+     P F+ V
Sbjct: 79  ---SFDQSHVPPPQNKTEIPVEEEVKKTPVFKKWQHPASPFCYEPTTFVPPFIQV 125

[Close]

BLAST of Lcy01g003110 vs. TAIR 10
Match: AT3G23170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G14450.1); Has 74 Blast hits to 74 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 2.7e-10
Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 0


Query: 1   MADSQRRTSATAASRRHQQQPSRLQRRAPASLQI----NRSDWKVAIPLLSPLVSPSSPN 60
           M+ + +R   ++ S   ++QPSRL +R PA   +      ++W  AIPLLSPL      +
Sbjct: 1   MSTTMKRQGCSSDSGDLRRQPSRLLKRPPALKIVPATPAANNWNTAIPLLSPLALSPESS 60

Query: 61  DIQNRTLDSGSTSSSSSQHHHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV 114
            +    ++   +++ +           EK PVFKKWQHPAAPF+Y+S    P FVPV
Sbjct: 61  PVDQPPVEKNQSTAVA----------VEKTPVFKKWQHPAAPFYYESSTFVPPFVPV 107

The following BLAST results are available for this feature:

BLAST of Lcy01g003110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NN02	1.0e-09	42.61	Uncharacterized protein At4g14450, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Lcy01g003110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ER11	1.3e-39	83.62	uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3...	[more]
A0A6J1KKB8	6.3e-39	81.36	uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita maxima OX=366...	[more]
A0A1S3CDB1	1.2e-37	75.19	uncharacterized protein At4g14450, chloroplastic-like OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1H320	2.8e-31	72.41	uncharacterized protein At4g14450, chloroplastic-like OS=Cucurbita moschata OX=3...	[more]
A0A0A0LLJ8	8.2e-31	71.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G190740 PE=4 SV=1	[more]

BLAST of Lcy01g003110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875425.1	3.5e-44	89.38	uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]	[more]
XP_022930471.1	2.6e-39	83.62	uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]	[more]
KAG6593848.1	5.8e-39	81.51	putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_023000559.1	1.3e-38	81.36	uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]	[more]
XP_023515028.1	4.9e-38	81.74	uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pep...	[more]

BLAST of Lcy01g003110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04330.1	1.1e-11	45.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G14450.1	7.1e-11	42.61	unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc...	[more]
AT3G23170.1	2.7e-10	35.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..72
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	PANTHER	PTHR33912:SF2	PUTATIVE-RELATED	coord: 10..112
IPR040381	Uncharacterized protein At4g14450-like	PANTHER	PTHR33912	OS01G0939400 PROTEIN	coord: 10..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g003110.1	Lcy01g003110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus