
Lcy01g002910 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACTGCACTCAAGGCACCCACAGCTGCACCTGGCTTGCTGCATTCTAAGCAGTCATCCACCCCCAAGGAGGAGGGGAGCATGAAGCATTACTCCGACGACCTCGTCACCGGACACATTTACGCCAAACATCGCGACGACGATACTACCAAAATCGATCTCCCCAATTACATTTCAGTTATTGAAAATATTATCGCTACTGCTGATCGAATTACCGATACCGTTCATCGGGTAAAAATACGACGTTTATACACAAATAAATGTTTCTTTTTTTTTTTTTTCCATAAATTCTACTTGAAGTAATTTTCTTTTTGTGGTGAATAAGTATATATTGTTGTATTCATGTAGGGAGCTGAAGGGCGTCTGGTGTACTCAGACGAAATGTTGGCATCCAATGCTGTGATCGAGCCTCCACTTTGTACCCTTCATCGTATCTCTAGCGAGGTCATACTTCATAAAATTTAATTATTAGGATCCTTTTGAGAATAATCTAGACCTCCTTGGATAACCATTATTTAGACCCCTTTGATAAAATTAAGTTGGAAAACACAGCTTTCACTTATAAGTTTCTTGGTTTTGTTATCTACCTTCTTCCCATATTTTCAAAAATCAAGTCAAGTTTTGAAAACTAAAAGAAGTAGTTTTCAAAAATTTGTTTTTGTTTTTGGAATTTGACTAGGAATTCAAATATGTCCTTAACAAAAATAAAAACCATCCCAAGGAAATTGAGAGAAAACAAGCTTAATTTTCAAAAACTAAAAACCAAATGGTTATCAAACGGGGCTCTAGTGGTTGGTTTTTTTCTTTCTCTTACAATTAAGTTTGTTCATTAACTATATTTCTTTGGTTTTTTTTTTTATTTTTTGCAAACTATTTCTTTGGTTTATTTCTGCACTTTTTAACAACTCATTAGAAAATGATTGAAAAATTTTATGTTAAATTACAAGTTTAGTCTTAGAACTTTCAAGTTTGTACCTATTTGTTTGGTTCATCGTCTAAAATAAGTCTTAGAATTTTTTAGTTTATGTCTATTTATACCCTCAACTTAAAGTCCTACTAGACATGAAATTCATTTTTATATCTAATAGATCGACTGATTTTTAAACTTTATGAATATGTCAGAGATCTATTAGACAATTAAAAAATTGAAAGTTTAGGAACAATATTAGATATTTTCAAAGTTTAAAAATCTATTAAACATTTTTTTTAAAAGTTCACGATGTTTTAGATACAAACTTGAAAGTAAAAAGAAATGCTTTTAAGTTAGGATTTCGAAAATAGGTTTTGTTAGCAAATTAAAATTGTCCATTTTTTTTTGGAAAAGAGATACTTTAAAATTAAAATTGTCCATTAACCAACATGATTTTAAACTTTGCCATCAAAAATTGAAAGAGCATCAGTAAAAAAACAACAAAATCTTTACATTGATCCATTTTAACTTGCAATTGAAATTCAAATCGGAATGTTATTTCCTCAGTTATCATGCAAGGCTCCAGGGATAGAAAAAGCACACGAGACCACACTAGAAATCTTCGAAATATTGAGAAATTATCCATGGGAAGCCAAGGCAGCTCTCACTTTGTTAGCCTTTGCAACTGATTATGGAGACTTATGGCATCTCCACCATTACTCCCAAGCTGATCCTTTGGCTAAATCTTTGGCAATTATCAAGCGAGTTGCTTCTTTGAAGAAGCACTTAGACTCACTTCGATACCGACAAGTGCTTCTCAACCCCAAGAGTCTCATCCAAAGCTGCTTGCTGGCCATCAAATACATGAATGAAATTAGAGAATTCTCCAAATATGATGTCAAGGAACTTCCTGAATTGCCTTCTGCTCTTCGTCAGATTCCATTGATCACTTATTGGGTCATACACACTATTGTTGCTTCTAGAATTGAGCTCTCCAGCTATCTCAGTGACTCTGAGTAAGTAATTTTATCCATATACCCTTTCGAAACCTCCCCTTGTTAAGATGAATGGATACCTCACAATTTATAAGATTTATGAATTACTCCACTCATTGTCAATTAGTTTTGAAATAAAACCCTATGTTTATCTATATGGTATCAGAACCCATAAAGTCCAAATGGGTATTTAGTAAAAAAAAAAGAGATCCGATTCAAGAATGTGTGAACTCAAAGAGGCACCATCTTCAGAGGGAGGATCCCACATCAGAAAAATTAATGGATACCTCAAAATTGATAAGATATGTGGATTACTTCACTCATGACCAATTGGTTTTGAGATGGAACTGTATATTTATCTAGTACTCTCTTTTACTTTATTAATTCATTTTACATTGTTTTTTCAGGAACCAGCCACAGAGATATTTGAACGAATTGGCCGAGAAGATCGCCATCGTACTCGCCGTACTCGAAAAGCATCTCGACGCCATAAGAGAACAACACGGTTGAATACTTTAATTATAATATATCTTCATTGATATTATTGAATGTTAATTTGATATTGGCGTGACAGGAAAAATAACATTATATTTGGTGTGATTTGATGCAGAGGAGGTTGATCTCTACAGGTGGCTCGTCGACCACATTGAGCATTATCACACTGACATTACATTAGTGGTTCCCAAACTCCTCAGCGGCAAAACTGAAACCAAGCCACTCATCGATGGCTCCACCCTAAGAGAGGTGAGCGTTCAAGAAAGTTTGTCAGGGAAGAATGTGATATTGGTAATCTCTGGATTGGATATCTCAGATCATGATATCAGAGCACTTCATCAAGTTTACAATGAATTGAAACTCAGAGACCATACGTATGAGATTGTTTGGATTCCAATTATCCCGGAGCCTTATCATGAAGAAGATCGCAAGAGATATGATTACTTGCGATCTACAATGAAGTGGTATTCGATACAATTCACTACAAAAATATCTGGCATGAGATATATTGAAGAGAAGTGGCAACTCAGAGAGGATCCATTGGTTGTTGTACTAAACTCACAGTCTAAAGTGGTATTCACAAATGCAATTCATTTGATTCGAGTTTGGGGAAGTGAAGCAATTGATTTTACACATGAAAGAACCAAGACTTTACTGAGAAAAAATTGGCCCGATTCAACCCTCGTCAAATTCACACACCAACCAAGATTACAAACTTGGGTATGTGTATATATAACATGTGTGTGATCTCATTTTAATGTGCATTTATATTTGTATTTCTATCTGCTAATCTTTTGTGTTGATATGTACTCTTTCTTTCAAACAGATCAAGCAAGATAAAAGCATCCTATTCTATGGAGGAAACCCAGCTTGGATCCAACAATTTGAAGAGAGAGTAGAAATTTTGAGAAATGATCCTTTGATAATCGATGGGGGTTCGTTTGAGATCGTACGCATAGGAAAGGATGCGAAAGGAGAGGATGATCCTGCACTTATGACTCGTTTTTGGGCCACGCAATGGGGTTATTTTGTAGTCAAGAGTCAGATACTTGGCTCGAGTGCGAGTGAGACAACGGAAGACATCTTAAGGTTGATTTCTTACCAAAATGAAGATGGTTGGGTTGTTCTTACCGTAGGCTCAGCACCTGTGCTAGTTGGTCGTGGCATTTTGATTTTGAGAATGCTAGAGGAGTTCCCCAAATGGAAGCAAACTTTGCGCCTGAAAGGTTTTCCTGATGCTTTTAGAGAGTACTTCAATGAGTTGGCTCTCAAGAGTCACCAATGTGACCGAGTAATTCTTCCCGGATTTAGTGGATGGATTCCTATGATTGTCAATTGTCCTGAATGTCCTCGTTTCATGGAGACTGGTATTAGCTTCAAGTGTTGCCATGGAGGTGCTCATATGTGAGGACTATTGCATCCATTGATCTGAACTGCTCGGAAAGTCGATCGCGTATCCCTATTTTTATTACGTTACACACTAATAGCTACTACTACTATAATGAATGATGGTGTCATTTGGTTCTATGCAATTTTATATTAAAATCGAGTCCATTAGGTCTCGTTCTTATTATTGATCATGTGTATGGTTTATATTATTTAAGATAAATGGTCATCAAGTCTTTCCTTAACTTCGATGAATGAGAAGTACTTTATTTTATTGACTGCTTTTGATTTACATCCTTAAAGAAAAAATCAAGATTATAGTTATTTCATTTTTCTTGTTTGTATCTAAAAAATTAAAATAATCAATTACACATGAAAAAAACCCAAATCTCTCTCTTTGAAGGAAAAAAAAAATGTTAAATTATCAAAAATACCCTTGAACGATGGGGTTGGTTTCAATTATACCCTAAACTTTCAAAAGTTTCATTTTAGCCCTCGAAGTTTGAATTTGTTTCAAAACAACCCTTGAAGACATTTTATCGTTAAATTTATAGACGGAAAATGACGTGTTTACATATGTGTATTGTTGCTTATGTGAACATATTTGAACATATACGTGAAAAAAACAATAAAAACACATGCAAACACACATCATTTTTTGTGCATAAATTTAACCGAAAATATTTGTAATGGTCATTTTGAAACAAAATTCAAACTTTGAAGGCTAAAATGAAACTTTTGGAAGTTCAAGGGGTATAATCGAAACCAACCTCATAGTTCAAGGACATTTTTGAGAATTTAACCAAAAAGATATAACAAAAATGTTAAGAGGATGATCATGTGTATATAAGGGAGGACAAGTATCTCCATTGGTATGAGGCCTTTTAGGATGAACCAAAAGCAAAGCCATGAGGGCTTATGCCCAAAGTGGACGATATCATACCATTGTGAAGATATGTGATTGTCCGGTAGTCTCTTACAAAAAAAAACATATAACATTAAAGAAAGAGGCTAGGGGCGTTTAAGTTCACTCACTATTTTATTTGTTTTTATTTTTATTTTTTGACAACGTAGGAATAAAGGATTGAACCTCTGACTTCTTGGTCAAAGTACAAGACTTATGCTAGTTGAGTCATGCTCTTGTTGGCCATTCACTATTTTATTTGTTGAGTTCAACAAATGTAATGTAGGAGTGTAATTAAATTAATTTTCGTCATTAAAACTAGAAATAATTTTTTTTCTTCATAATAATTCTTTTCTTCATAATGTATAGAATCAAACTAGTGGTGATTTTATAGTAAAGATGCTTTACCATGATGGTATTTTATGGCAGGCATAA ATGGCCACTGCACTCAAGGCACCCACAGCTGCACCTGGCTTGCTGCATTCTAAGCAGTCATCCACCCCCAAGGAGGAGGGGAGCATGAAGCATTACTCCGACGACCTCGTCACCGGACACATTTACGCCAAACATCGCGACGACGATACTACCAAAATCGATCTCCCCAATTACATTTCAGTTATTGAAAATATTATCGCTACTGCTGATCGAATTACCGATACCGTTCATCGGGGAGCTGAAGGGCGTCTGGTGTACTCAGACGAAATGTTGGCATCCAATGCTGTGATCGAGCCTCCACTTTGTACCCTTCATCGTATCTCTAGCGAGCCACAGAGATATTTGAACGAATTGGCCGAGAAGATCGCCATCGTACTCGCCGTACTCGAAAAGCATCTCGACGCCATAAGAGAACAACACGAGGAGGTTGATCTCTACAGGTGGCTCGTCGACCACATTGAGCATTATCACACTGACATTACATTAGTGGTTCCCAAACTCCTCAGCGGCAAAACTGAAACCAAGCCACTCATCGATGGCTCCACCCTAAGAGAGGTGAGCGTTCAAGAAAGTTTGTCAGGGAAGAATGTGATATTGGTAATCTCTGGATTGGATATCTCAGATCATGATATCAGAGCACTTCATCAAGTTTACAATGAATTGAAACTCAGAGACCATACGTATGAGATTGTTTGGATTCCAATTATCCCGGAGCCTTATCATGAAGAAGATCGCAAGAGATATGATTACTTGCGATCTACAATGAAGTGGTATTCGATACAATTCACTACAAAAATATCTGGCATGAGATATATTGAAGAGAAGTGGCAACTCAGAGAGGATCCATTGGTTGTTGTACTAAACTCACAGTCTAAAGTGGTATTCACAAATGCAATTCATTTGATTCGAGTTTGGGGAAGTGAAGCAATTGATTTTACACATGAAAGAACCAAGACTTTACTGAGAAAAAATTGGCCCGATTCAACCCTCGTCAAATTCACACACCAACCAAGATTACAAACTTGGAATCAAACTAGTGGTGATTTTATAGTAAAGATGCTTTACCATGATGGTATTTTATGGCAGGCATAA ATGGCCACTGCACTCAAGGCACCCACAGCTGCACCTGGCTTGCTGCATTCTAAGCAGTCATCCACCCCCAAGGAGGAGGGGAGCATGAAGCATTACTCCGACGACCTCGTCACCGGACACATTTACGCCAAACATCGCGACGACGATACTACCAAAATCGATCTCCCCAATTACATTTCAGTTATTGAAAATATTATCGCTACTGCTGATCGAATTACCGATACCGTTCATCGGGGAGCTGAAGGGCGTCTGGTGTACTCAGACGAAATGTTGGCATCCAATGCTGTGATCGAGCCTCCACTTTGTACCCTTCATCGTATCTCTAGCGAGCCACAGAGATATTTGAACGAATTGGCCGAGAAGATCGCCATCGTACTCGCCGTACTCGAAAAGCATCTCGACGCCATAAGAGAACAACACGAGGAGGTTGATCTCTACAGGTGGCTCGTCGACCACATTGAGCATTATCACACTGACATTACATTAGTGGTTCCCAAACTCCTCAGCGGCAAAACTGAAACCAAGCCACTCATCGATGGCTCCACCCTAAGAGAGGTGAGCGTTCAAGAAAGTTTGTCAGGGAAGAATGTGATATTGGTAATCTCTGGATTGGATATCTCAGATCATGATATCAGAGCACTTCATCAAGTTTACAATGAATTGAAACTCAGAGACCATACGTATGAGATTGTTTGGATTCCAATTATCCCGGAGCCTTATCATGAAGAAGATCGCAAGAGATATGATTACTTGCGATCTACAATGAAGTGGTATTCGATACAATTCACTACAAAAATATCTGGCATGAGATATATTGAAGAGAAGTGGCAACTCAGAGAGGATCCATTGGTTGTTGTACTAAACTCACAGTCTAAAGTGGTATTCACAAATGCAATTCATTTGATTCGAGTTTGGGGAAGTGAAGCAATTGATTTTACACATGAAAGAACCAAGACTTTACTGAGAAAAAATTGGCCCGATTCAACCCTCGTCAAATTCACACACCAACCAAGATTACAAACTTGGAATCAAACTAGTGGTGATTTTATAGTAAAGATGCTTTACCATGATGGTATTTTATGGCAGGCATAA MATALKAPTAAPGLLHSKQSSTPKEEGSMKHYSDDLVTGHIYAKHRDDDTTKIDLPNYISVIENIIATADRITDTVHRGAEGRLVYSDEMLASNAVIEPPLCTLHRISSEPQRYLNELAEKIAIVLAVLEKHLDAIREQHEEVDLYRWLVDHIEHYHTDITLVVPKLLSGKTETKPLIDGSTLREVSVQESLSGKNVILVISGLDISDHDIRALHQVYNELKLRDHTYEIVWIPIIPEPYHEEDRKRYDYLRSTMKWYSIQFTTKISGMRYIEEKWQLREDPLVVVLNSQSKVVFTNAIHLIRVWGSEAIDFTHERTKTLLRKNWPDSTLVKFTHQPRLQTWNQTSGDFIVKMLYHDGILWQA Homology
BLAST of Lcy01g002910 vs. ExPASy Swiss-Prot
Match: Q9SS87 (Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana OX=3702 GN=SEOB PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.9e-18 Identity = 64/224 (28.57%), Postives = 112/224 (50.00%), Query Frame = 0
BLAST of Lcy01g002910 vs. ExPASy Swiss-Prot
Match: Q93XX2 (Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana OX=3702 GN=SEOA PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.3e-10 Identity = 69/283 (24.38%), Postives = 134/283 (47.35%), Query Frame = 0
BLAST of Lcy01g002910 vs. ExPASy Swiss-Prot
Match: Q9FXE2 (Protein SIEVE ELEMENT OCCLUSION C OS=Arabidopsis thaliana OX=3702 GN=SEOC PE=4 SV=2) HSP 1 Score: 55.5 bits (132), Expect = 1.5e-06 Identity = 55/243 (22.63%), Postives = 121/243 (49.79%), Query Frame = 0
BLAST of Lcy01g002910 vs. ExPASy Swiss-Prot
Match: Q7Y0E8 (Probable nucleoredoxin 1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0405500 PE=2 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 1.1e-04 Identity = 30/108 (27.78%), Postives = 60/108 (55.56%), Query Frame = 0
BLAST of Lcy01g002910 vs. ExPASy Swiss-Prot
Match: O80763 (Probable nucleoredoxin 1 OS=Arabidopsis thaliana OX=3702 GN=At1g60420 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04 Identity = 34/108 (31.48%), Postives = 62/108 (57.41%), Query Frame = 0
BLAST of Lcy01g002910 vs. ExPASy TrEMBL
Match: A0A6J1CAR6 (protein SIEVE ELEMENT OCCLUSION B-like OS=Momordica charantia OX=3673 GN=LOC111009772 PE=4 SV=1) HSP 1 Score: 522.3 bits (1344), Expect = 1.6e-144 Identity = 289/493 (58.62%), Postives = 315/493 (63.89%), Query Frame = 0
BLAST of Lcy01g002910 vs. ExPASy TrEMBL
Match: A0A0A0LIL1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G196890 PE=4 SV=1) HSP 1 Score: 505.8 bits (1301), Expect = 1.5e-139 Identity = 281/495 (56.77%), Postives = 306/495 (61.82%), Query Frame = 0
BLAST of Lcy01g002910 vs. ExPASy TrEMBL
Match: A0A6J1L5P1 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC111499360 PE=4 SV=1) HSP 1 Score: 503.1 bits (1294), Expect = 1.0e-138 Identity = 280/495 (56.57%), Postives = 306/495 (61.82%), Query Frame = 0
BLAST of Lcy01g002910 vs. ExPASy TrEMBL
Match: A0A5D3E3Q0 (Protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001840 PE=4 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 8.5e-138 Identity = 281/496 (56.65%), Postives = 310/496 (62.50%), Query Frame = 0
BLAST of Lcy01g002910 vs. ExPASy TrEMBL
Match: A0A1S3CNA9 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucumis melo OX=3656 GN=LOC103502848 PE=4 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 8.5e-138 Identity = 281/496 (56.65%), Postives = 310/496 (62.50%), Query Frame = 0
BLAST of Lcy01g002910 vs. NCBI nr
Match: XP_022138669.1 (protein SIEVE ELEMENT OCCLUSION B-like [Momordica charantia]) HSP 1 Score: 522.3 bits (1344), Expect = 3.3e-144 Identity = 289/493 (58.62%), Postives = 315/493 (63.89%), Query Frame = 0
BLAST of Lcy01g002910 vs. NCBI nr
Match: XP_011649167.1 (protein SIEVE ELEMENT OCCLUSION B [Cucumis sativus] >KGN61638.1 hypothetical protein Csa_006101 [Cucumis sativus]) HSP 1 Score: 505.8 bits (1301), Expect = 3.2e-139 Identity = 281/495 (56.77%), Postives = 306/495 (61.82%), Query Frame = 0
BLAST of Lcy01g002910 vs. NCBI nr
Match: XP_023006703.1 (protein SIEVE ELEMENT OCCLUSION B-like [Cucurbita maxima]) HSP 1 Score: 503.1 bits (1294), Expect = 2.1e-138 Identity = 280/495 (56.57%), Postives = 306/495 (61.82%), Query Frame = 0
BLAST of Lcy01g002910 vs. NCBI nr
Match: XP_008465186.2 (PREDICTED: protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo] >KAA0057498.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo var. makuwa] >TYK30190.1 protein SIEVE ELEMENT OCCLUSION B-like [Cucumis melo var. makuwa]) HSP 1 Score: 500.0 bits (1286), Expect = 1.8e-137 Identity = 281/496 (56.65%), Postives = 310/496 (62.50%), Query Frame = 0
BLAST of Lcy01g002910 vs. NCBI nr
Match: XP_038875883.1 (protein SIEVE ELEMENT OCCLUSION B-like [Benincasa hispida]) HSP 1 Score: 498.4 bits (1282), Expect = 5.1e-137 Identity = 281/496 (56.65%), Postives = 307/496 (61.90%), Query Frame = 0
BLAST of Lcy01g002910 vs. TAIR 10
Match: AT3G01680.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 94.4 bits (233), Expect = 2.1e-19 Identity = 64/224 (28.57%), Postives = 112/224 (50.00%), Query Frame = 0
BLAST of Lcy01g002910 vs. TAIR 10
Match: AT3G01670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.9 bits (167), Expect = 9.3e-12 Identity = 69/283 (24.38%), Postives = 134/283 (47.35%), Query Frame = 0
BLAST of Lcy01g002910 vs. TAIR 10
Match: AT1G67790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 3.7e-08 Identity = 27/116 (23.28%), Postives = 68/116 (58.62%), Query Frame = 0
BLAST of Lcy01g002910 vs. TAIR 10
Match: AT1G60420.1 (DC1 domain-containing protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.7e-05 Identity = 34/108 (31.48%), Postives = 62/108 (57.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|