Lcy01g002020 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTCTTTTTCCTATTTAAATCTCTAGTTGAAATGAAGCTAACCAAGTAGAGTTGTTTTTTGAGTTCCCTTCTCCTTTTTGGGGTTTGTTCTTGCCTTTCTAAGGCTTTGTTGGGGAGAAGTTGAGATGCAAATGGAAGTAGAAGATGATGATTTGTTGTTTGCTGAGCTTACGAGACGGATTTCGCTTCTCATTATGGACGACGACGAGCTTCCGCTTGTTGATACGGTTCGTTTCGCCTTCTCGATCTTTAGCCATTCACTTCTTTTTATTAGGCTTTGAACTTTTAAACTTAGTGTTTGTTTAATGTTTGATAGGTCTATGTTGTTAATATTGTTTGTTTGTGCTACTAAACACTTTTCGAAGTCTAATGTGATCTGTTGGAGTTTAAAAATCGCGAATAGTGAAACGTGACATTAAAAGTTTAAAGAGAGGTTAGAAATTTTTTGAAGTATTTTGATTGGATAGCTAACATTGCTGAAGTTTAGTTACCTTTTTTTCAAAATACAAGTTTGAGTGTGTAGTGAACTACTCTTCAATTCTATCGGTTTCTCTAATCAAACTCAAATTTGACAATTCATTTCTTAAACATTCATTAGATTGAGAAGTTAAACTCACAACTTAAAGTTCCGACCCCTAAAAAATTTTAGGAAGTGTTTAGTCCAAGGAGTTGTTGTGGGACCTACAAAGACACTCTGTTGTGGGTCTCACAAACTTATTAATTACTACTTTAACTCCTGTGACAAAACAATTCTAGATTTCATAATTTCAACTCTTTAGATTAAACTGAGATCAAATTTGTAACTAAACATATCATTAATGTTTCAGGATTTGACTCGGGCAGTACACCGAGTCCGACCTAGACAGTTGCCATTAATGGTGGATTACGAGCACAACTTTGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCGGCACGGTTGCCGCCGCCGAGGAGGAAGCAGAGGAATGCCGCCGCCGCCGCCTACAGAATCAAGTCGGAAAATAAGAGGCTCAATTCTCAACCATCTTCAACCTATTATTTTAAGCCCAGAAAGGGCTGAGCTTATAATTTTCTTATCCTTTCTAATTATTTCAAGTTTTAGTTCTATATTAACATTTAATTTTTTAATAATTCATGTGTGACAGTGATATGTTAGTTATGTCACTTATGAAATAAAGCTATCTAGAACCTTGATTGTCTATTTTTTTTGGATTAATAAAAAGACTTAGATTT TTTTCTTTTTCCTATTTAAATCTCTAGTTGAAATGAAGCTAACCAAGTAGAGTTGTTTTTTGAGTTCCCTTCTCCTTTTTGGGGTTTGTTCTTGCCTTTCTAAGGCTTTGTTGGGGAGAAGTTGAGATGCAAATGGAAGTAGAAGATGATGATTTGTTGTTTGCTGAGCTTACGAGACGGATTTCGCTTCTCATTATGGACGACGACGAGCTTCCGCTTGTTGATACGGATTTGACTCGGGCAGTACACCGAGTCCGACCTAGACAGTTGCCATTAATGGTGGATTACGAGCACAACTTTGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCGGCACGGTTGCCGCCGCCGAGGAGGAAGCAGAGGAATGCCGCCGCCGCCGCCTACAGAATCAAGTCGGAAAATAAGAGGCTCAATTCTCAACCATCTTCAACCTATTATTTTAAGCCCAGAAAGGGCTGAGCTTATAATTTTCTTATCCTTTCTAATTATTTCAAGTTTTAGTTCTATATTAACATTTAATTTTTTAATAATTCATGTGTGACAGTGATATGTTAGTTATGTCACTTATGAAATAAAGCTATCTAGAACCTTGATTGTCTATTTTTTTTGGATTAATAAAAAGACTTAGATTT ATGCAAATGGAAGTAGAAGATGATGATTTGTTGTTTGCTGAGCTTACGAGACGGATTTCGCTTCTCATTATGGACGACGACGAGCTTCCGCTTGTTGATACGGATTTGACTCGGGCAGTACACCGAGTCCGACCTAGACAGTTGCCATTAATGGTGGATTACGAGCACAACTTTGTAAGGGAGAGCAAAGGCACTGGAGTTTTCATTCCGGCACGGTTGCCGCCGCCGAGGAGGAAGCAGAGGAATGCCGCCGCCGCCGCCTACAGAATCAAGTCGGAAAATAAGAGGCTCAATTCTCAACCATCTTCAACCTATTATTTTAAGCCCAGAAAGGGCTGA MQMEVEDDDLLFAELTRRISLLIMDDDELPLVDTDLTRAVHRVRPRQLPLMVDYEHNFVRESKGTGVFIPARLPPPRRKQRNAAAAAYRIKSENKRLNSQPSSTYYFKPRKG Homology
BLAST of Lcy01g002020 vs. ExPASy TrEMBL
Match: A0A6J1EQJ8 (uncharacterized protein LOC111436898 OS=Cucurbita moschata OX=3662 GN=LOC111436898 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.9e-40 Identity = 90/111 (81.08%), Postives = 96/111 (86.49%), Query Frame = 0
BLAST of Lcy01g002020 vs. ExPASy TrEMBL
Match: A0A6J1KEC6 (uncharacterized protein LOC111494227 OS=Cucurbita maxima OX=3661 GN=LOC111494227 PE=4 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38 Identity = 87/111 (78.38%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Lcy01g002020 vs. ExPASy TrEMBL
Match: A0A0A0KGT1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G153490 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 1.4e-38 Identity = 85/110 (77.27%), Postives = 96/110 (87.27%), Query Frame = 0
BLAST of Lcy01g002020 vs. ExPASy TrEMBL
Match: A0A5A7SW60 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00710 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 2.2e-36 Identity = 83/110 (75.45%), Postives = 96/110 (87.27%), Query Frame = 0
BLAST of Lcy01g002020 vs. ExPASy TrEMBL
Match: A0A1S3C8R0 (uncharacterized protein LOC103497931 OS=Cucumis melo OX=3656 GN=LOC103497931 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 2.2e-36 Identity = 83/110 (75.45%), Postives = 96/110 (87.27%), Query Frame = 0
BLAST of Lcy01g002020 vs. NCBI nr
Match: XP_022930457.1 (uncharacterized protein LOC111436898 [Cucurbita moschata]) HSP 1 Score: 174.9 bits (442), Expect = 4.0e-40 Identity = 90/111 (81.08%), Postives = 96/111 (86.49%), Query Frame = 0
BLAST of Lcy01g002020 vs. NCBI nr
Match: XP_023521928.1 (uncharacterized protein LOC111785772 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.1 bits (440), Expect = 6.8e-40 Identity = 89/111 (80.18%), Postives = 96/111 (86.49%), Query Frame = 0
BLAST of Lcy01g002020 vs. NCBI nr
Match: KAG6593910.1 (hypothetical protein SDJN03_13386, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 173.3 bits (438), Expect = 1.2e-39 Identity = 89/111 (80.18%), Postives = 96/111 (86.49%), Query Frame = 0
BLAST of Lcy01g002020 vs. NCBI nr
Match: XP_023515111.1 (uncharacterized protein LOC111779237 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 172.6 bits (436), Expect = 2.0e-39 Identity = 88/111 (79.28%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Lcy01g002020 vs. NCBI nr
Match: KAG7026252.1 (Peroxiredoxin-2F, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 170.6 bits (431), Expect = 7.5e-39 Identity = 88/111 (79.28%), Postives = 95/111 (85.59%), Query Frame = 0
BLAST of Lcy01g002020 vs. TAIR 10
Match: AT3G06070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19190.1); Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 8.1e-07 Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 0
BLAST of Lcy01g002020 vs. TAIR 10
Match: AT5G19190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 5.2e-06 Identity = 37/96 (38.54%), Postives = 52/96 (54.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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