Homology
BLAST of Lcy01g001910 vs. ExPASy Swiss-Prot
Match:
P0C8Q8 (Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)
HSP 1 Score: 794.7 bits (2051), Expect = 8.7e-229
Identity = 391/652 (59.97%), Postives = 505/652 (77.45%), Query Frame = 0
Query: 53 SGSCLDYELSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLA 112
SG D E +LVSAL SCAS++ + G+QIH V KSG DSN +I NS++NMYAKC LA
Sbjct: 34 SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93
Query: 113 DARLLFDSCSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDC 172
DA +F +KLDS S NIM+ GYV+ R+L +A +LFD MP+R CVSYTT+I G AQN+
Sbjct: 94 DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153
Query: 173 WSEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTN 232
WSEA+E+F++MR+ G+ NEVT+A+V+SACSH+GGIW+C ML +L IKL G V +STN
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213
Query: 233 LLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISW 292
LLHMYC+C LKDAR+LF EMP RN V+WNVML G+ K+GL+++A ELF++I E+D++SW
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273
Query: 293 ATMIDGYVQVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVK 352
TMIDG ++ +L EAL+ Y+ M + ++P+EVM+VDLLSA +SV +G Q H IVK
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333
Query: 353 TGFDCYDFIQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQI 412
GFDCYDF+QATII FYA I LA Q++ S K+H+ S NALI GF K M+EQAR++
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393
Query: 413 FDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSG-VEPNEITMVSVFSSIAALGK 472
FD +KD+FSW+ MISGYAQ+ P +AL LF M+ S V+P+ ITMVSVFS+I++LG
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453
Query: 473 LAEGRLAHEYVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRD-KASTVSPWNAI 532
L EG+ AH+Y+ IP NDNL+AA+IDMYAKCGSI TAL++F+Q ++ +ST+SPWNAI
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 533 ICGLAMHGHANLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG 592
ICG A HGHA L+L+++SDLQ IK NSITF+GVL ACCHAGLVELG+ YF SMKS +G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573
Query: 593 IEPNIKHYGCLVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAA 652
IEP+IKHYGC+VDLLG+AGRL+EA+E+I+ MP+KADV+IWG LL+A RTHG VEI E AA
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAA 633
Query: 653 ESLARLEPSHGAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
LA ++PSHG +V+LSN+YADAG WED +LVR M+++ + S SGVV
Sbjct: 634 TELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685
BLAST of Lcy01g001910 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 424.9 bits (1091), Expect = 1.8e-117
Identity = 232/637 (36.42%), Postives = 363/637 (56.99%), Query Frame = 0
Query: 68 KSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDSCSKLDSV 127
KS ++ F Q +H V KSG + +++N+L+N+Y+K G AR LFD +
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 128 SCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVFKDMRSAG 187
S N +LS Y K +++ + FD++P R VS+TTMI+G + +AI V DM G
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 188 VAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVCSSLKDAR 247
+ P + T+ +V+++ + + +H+ ++KL G V +S +LL+MY C A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 248 RLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYVQVKRLSE 307
+F M VR+ SWN M+ ++ G +D A FE++ ERD+++W +MI G+ Q
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 308 ALLMYSAM-RKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDFIQATII 367
AL ++S M R S L P+ + +LSAC + G+Q HS IV TGFD + +I
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 368 SFYAACGRIDLA--CLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKDVFSW 427
S Y+ CG ++ A ++ + + + AL+ G+ K + QA+ IF + ++DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 428 STMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHEYVCN 487
+ MI GY Q+ A+ LF MV G PN T+ ++ S ++L L+ G+ H
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 488 KAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHANLSL 547
+ ++S A+I MYAK G+I++A F IR + TVS W ++I LA HGHA +L
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEAL 501
Query: 548 EIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGCLVDL 607
E+F + ++ + IT++GV AC HAGLV G +YF MK V I P + HY C+VDL
Sbjct: 502 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 561
Query: 608 LGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGAGR 667
GRAG L+EA+E I MP++ DVV WG+LL+ACR H +++G+ AAE L LEP +
Sbjct: 562 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 621
Query: 668 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGV 702
L+NLY+ G WE+A+ +R++M+ R+ + G S +
Sbjct: 622 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
BLAST of Lcy01g001910 vs. ExPASy Swiss-Prot
Match:
Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)
HSP 1 Score: 398.3 bits (1022), Expect = 1.8e-109
Identity = 235/666 (35.29%), Postives = 354/666 (53.15%), Query Frame = 0
Query: 43 DLPSFFNGRPSGSCLDYELSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLI 102
DL SF + P LD S +KS SAI+ + +HA V KSGF + FI N LI
Sbjct: 12 DLSSFTDSSPFAKLLD------SCIKS--KLSAIYV-RYVHASVIKSGFSNEIFIQNRLI 71
Query: 103 NMYAKCGRLADARLLFDSCSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTT 162
+ Y+KCG L D R +FD + + + N +++G KL L+ A LF MP+R ++ +
Sbjct: 72 DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 131
Query: 163 MILGLAQNDCWSEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLN 222
M+ G AQ+D EA+ F M G NE + ASV+SACS + + + +H+L+ K
Sbjct: 132 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 191
Query: 223 FVGLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFE 282
F+ V I + L+ MY C ++ DA+R+F EM RN VSWN ++ F ++G EA ++F+
Sbjct: 192 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 251
Query: 283 RIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDE 342
M +S ++P+EV + ++SAC +I
Sbjct: 252 -------------------------------MMLESRVEPDEVTLASVISACASLSAIKV 311
Query: 343 GRQFHSMIVKTGFDCYDFIQA-TIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFT 402
G++ H +VK D I + + YA C RI A + +V + ++I G+
Sbjct: 312 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 371
Query: 403 KKRMIEQARQIFDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVS 462
+ AR +F M E++V SW+ +I+GY QN + AL LF + V P + +
Sbjct: 372 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 431
Query: 463 VFSSIAALGKLAEGRLAHEYVCNKAIPLNDN------LSAAVIDMYAKCGSISTALDVFY 522
+ + A L +L G AH +V + ++IDMY KCG + VF
Sbjct: 432 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 491
Query: 523 QIRDKASTVSPWNAIICGLAMHGHANLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLV 582
++ ++ WNA+I G A +G+ N +LE+F ++ K + IT +GVL AC HAG V
Sbjct: 492 KMMERDCV--SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 551
Query: 583 ELGERYFWSMKSVYGIEPNIKHYGCLVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLA 642
E G YF SM +G+ P HY C+VDLLGRAG L+EA+ +I MPM+ D VIWG+LLA
Sbjct: 552 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 611
Query: 643 ACRTHGEVEIGERAAESLARLEPSHGAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRS 702
AC+ H + +G+ AE L +EPS+ VLLSN+YA+ G WED VR++M+ + + +
Sbjct: 612 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 635
BLAST of Lcy01g001910 vs. ExPASy Swiss-Prot
Match:
Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 384.4 bits (986), Expect = 2.7e-105
Identity = 213/609 (34.98%), Postives = 330/609 (54.19%), Query Frame = 0
Query: 102 INMYAKCGRLADARLLFDSCSKLDSVSCNIMLSGYVK-------LRQLENARQLFDKMPD 161
+++ C L R++ K+ + N LS ++ L A +F + +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 162 RGCVSYTTMILGLAQNDCWSEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCLML 221
+ + TM G A + A++++ M S G+ PN T V+ +C+ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 222 HALVIKLNFVGLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLV 281
H V+KL + + T+L+ MY L+DA ++F + P R+ VS+ ++KG+ G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 282 DEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSALQPNEVMIVDLLSAC 341
+ A++LF+ IP +DV+SW MI GY + EAL ++ M K+ ++P+E +V ++SAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 342 GQSVSIDEGRQFHSMIVKTGFDCYDFIQATIISFYAACGRIDLACLQYQMSDKNHVTSSN 401
QS SI+ GRQ H I GF I +I Y+ CG ++ AC
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC--------------- 336
Query: 402 ALIVGFTKKRMIEQARQIFDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSGVEP 461
+F+ +P KDV SW+T+I GY L AL LF M+ SG P
Sbjct: 337 ----------------GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 396
Query: 462 NEITMVSVFSSIAALGKLAEGRLAHEYVCN--KAIPLNDNLSAAVIDMYAKCGSISTALD 521
N++TM+S+ + A LG + GR H Y+ K + +L ++IDMYAKCG I A
Sbjct: 397 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 456
Query: 522 VFYQIRDKASTVSPWNAIICGLAMHGHANLSLEIFSDLQRRNIKLNSITFLGVLGACCHA 581
VF I K ++S WNA+I G AMHG A+ S ++FS +++ I+ + ITF+G+L AC H+
Sbjct: 457 VFNSILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 516
Query: 582 GLVELGERYFWSMKSVYGIEPNIKHYGCLVDLLGRAGRLKEAEEIIRTMPMKADVVIWGT 641
G+++LG F +M Y + P ++HYGC++DLLG +G KEAEE+I M M+ D VIW +
Sbjct: 517 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCS 576
Query: 642 LLAACRTHGEVEIGERAAESLARLEPSHGAGRVLLSNLYADAGLWEDASLVRRAMQSQRM 701
LL AC+ HG VE+GE AE+L ++EP + VLLSN+YA AG W + + R + + M
Sbjct: 577 LLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM 612
BLAST of Lcy01g001910 vs. ExPASy Swiss-Prot
Match:
Q9LUJ2 (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)
HSP 1 Score: 368.6 bits (945), Expect = 1.5e-100
Identity = 206/637 (32.34%), Postives = 339/637 (53.22%), Query Frame = 0
Query: 67 LKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDSCSKLDS 126
L +CA + A G QIH ++ K G+ + F+ NSL++ YA+CG
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200
Query: 127 VSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEV-FKDMRS 186
+L++AR++FD+M +R VS+T+MI G A+ D +A+++ F+ +R
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260
Query: 187 AGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVCSSLKD 246
V PN VTM V+SAC+ + + ++A + L+ + L+ MY C+++
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320
Query: 247 ARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYVQVKRL 306
A+RLF E N N M +V+ GL
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGLT------------------------------- 380
Query: 307 SEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDFIQATI 366
EAL +++ M S ++P+ + ++ +S+C Q +I G+ H +++ GF+ +D I +
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440
Query: 367 ISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKDVFSWS 426
I Y C R D A + V + N+++ G+ + ++ A + F+ MPEK++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500
Query: 427 TMISGYAQNELPDMALELFHGM-VVSGVEPNEITMVSVFSSIAALGKLAEGRLAHEYVCN 486
T+ISG Q L + A+E+F M GV + +TM+S+ S+ LG L + + Y+
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560
Query: 487 KAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHANLSL 546
I L+ L ++DM+++CG +A+ +F + ++ VS W A I +AM G+A ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620
Query: 547 EIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGCLVDL 606
E+F D+ + +K + + F+G L AC H GLV+ G+ F+SM ++G+ P HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680
Query: 607 LGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGAGR 666
LGRAG L+EA ++I MPM+ + VIW +LLAACR G VE+ AAE + L P
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713
Query: 667 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGV 702
VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
BLAST of Lcy01g001910 vs. ExPASy TrEMBL
Match:
A0A6J1L1I9 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111499011 PE=4 SV=1)
HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 629/702 (89.60%), Postives = 670/702 (95.44%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSFTPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDYE 60
MLV +I KLF RRITIPLSFTPL+ KWVS+FSTI +SR L +L SFFNGRPSG+CLDYE
Sbjct: 1 MLVFAIPKLFSRRITIPLSFTPLYPKWVSSFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
Query: 61 LSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDS 120
LSLVSALKSCAS+SAIFQGQQIHA V KSGFDSNTFILNSLINMYAKCG +ADARLLFDS
Sbjct: 61 LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVF 180
CS LDSVSCNIMLSGYVKLRQLENAR LFDKMP+RGCVSYTTMILGLAQNDCW EAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIGGIWNCLMLHALVIKL+F+GLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYV 300
SSLKDARRLF+EMPVRNTVSWNVMLKG+VKSGLVD+A ELF+RIPE+DVISWATMIDG+V
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
Query: 301 QVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDF 360
QVK+L EAL M+SAMRKS L PNEVMIVDLLSACGQS+SIDEGRQ HS+IVKTGFDCYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKD 420
+QAT+ISFY+ACGRI+LA LQYQ+SDK+H+ +SNALIVGF K RMI+QARQIFDVMPEKD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHE 480
VFSWSTMISGYAQNELPD+ALELFHGMVV GV NEITMVSVFS+IAA GKLAEGR AHE
Sbjct: 421 VFSWSTMISGYAQNELPDVALELFHGMVVRGVVANEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAAVIDMYAKCGSISTA++VFYQIRDKASTVSPWNA+ICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMNVFYQIRDKASTVSPWNAVICGLAMHGHA 540
Query: 541 NLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGC 600
NLSLEIFSDLQRR+IKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG+EPNIKHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RL+EAEE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 702
BLAST of Lcy01g001910 vs. ExPASy TrEMBL
Match:
A0A6J1H4P4 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111460125 PE=4 SV=1)
HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 629/702 (89.60%), Postives = 669/702 (95.30%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSFTPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDYE 60
M V +I KLF RRITIPLSFT L+ KWVSTFSTI +SR L +L SFFNGRPSG+CLDYE
Sbjct: 1 MPVFAIPKLFSRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
Query: 61 LSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDS 120
LSLVSALK CAS+SAIFQGQQIHA V KSGFDSNTFILNSLINMYAKCG +ADARLLFDS
Sbjct: 61 LSLVSALKYCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVF 180
CS LDSVSCNIMLSGYVKLRQLENARQLFDKMP+RGCVSYTTMILGLAQNDCW EAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIGGIWNCLMLHALVIKL+F+GLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYV 300
SSLKDARRLF+EMP+RNTVSWNVMLKG+VKSGLVD+A ELF+RIPERDVISWATMIDG+V
Sbjct: 241 SSLKDARRLFNEMPMRNTVSWNVMLKGYVKSGLVDKAIELFDRIPERDVISWATMIDGFV 300
Query: 301 QVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDF 360
QVK+L EAL M+SAMRKS L PNEVMIVDLLSACGQS+SIDEGRQ HS+IVKTGFDCYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKD 420
+QAT+ISFY+ACGRI+LA LQYQ+SDK+H+ +SNALIVGF K RMI+QARQIFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHE 480
VFSWSTMISGYAQNELPDMALELFHGMVVSG+EPNEITMVSVFS+IAA GKLAEGR AHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAAVIDMYAKCGSISTA+D+FYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
Query: 541 NLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGC 600
NLSLEIFSDLQ R+IKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG+EPNIKHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RL+EAEE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
GAGRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
BLAST of Lcy01g001910 vs. ExPASy TrEMBL
Match:
A0A6J1C9E1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111009536 PE=4 SV=1)
HSP 1 Score: 1236.9 bits (3199), Expect = 0.0e+00
Identity = 612/701 (87.30%), Postives = 656/701 (93.58%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSFTPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDYE 60
ML+S I KLFPR IT LSF+PL+LKWVST ST ST LQ+LPS FNGRPSG+CLDYE
Sbjct: 1 MLLSQIPKLFPRHITTALSFSPLYLKWVSTLSTTASTPGPLQNLPSCFNGRPSGTCLDYE 60
Query: 61 LSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDS 120
LSLVSALK CAS++AIFQGQQIH IV K+GF+SNTFI NSLINMYAKCGRL+D RLL DS
Sbjct: 61 LSLVSALKFCASSAAIFQGQQIHVIVLKTGFNSNTFIRNSLINMYAKCGRLSDGRLLCDS 120
Query: 121 CSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVF 180
CS LD VSCNIM+SGY+K RQL+NARQLFD MP+RGCVSYTTMILGLAQN CWSEAIE+F
Sbjct: 121 CSNLDPVSCNIMISGYIKFRQLDNARQLFDIMPERGCVSYTTMILGLAQNACWSEAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVC 240
KDMRS+GVAPNEVTMASVMSACSHIGGIWNC MLHALV+KLNF GLVLISTNLLHMYCVC
Sbjct: 181 KDMRSSGVAPNEVTMASVMSACSHIGGIWNCRMLHALVMKLNFTGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYV 300
SSL++ARRLFSEMP RNTVSWNVMLKG+VKSGLVDEARE FERIPERD+ISWAT+IDGYV
Sbjct: 241 SSLEEARRLFSEMPERNTVSWNVMLKGYVKSGLVDEAREFFERIPERDLISWATIIDGYV 300
Query: 301 QVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDF 360
QVK+L EA MYS MRKS L+PNEVMIVDLLSACGQS+S++EGRQFHS+IVKTGFDC+DF
Sbjct: 301 QVKQLREAFFMYSEMRKSDLEPNEVMIVDLLSACGQSMSVNEGRQFHSVIVKTGFDCFDF 360
Query: 361 IQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKD 420
IQAT+ISFYAACGRIDLA LQYQ+SDKNH+TSSNALIVGFTK +IE+ARQIFDVMPEKD
Sbjct: 361 IQATVISFYAACGRIDLAYLQYQVSDKNHLTSSNALIVGFTKNGLIERARQIFDVMPEKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHE 480
VFSWSTMISGYAQNELPDMALELFH MVVSGVEPNEITMVSVFS+IAALGKLAEGR AHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHEMVVSGVEPNEITMVSVFSTIAALGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
Y+C+K I LNDNLSAA+IDMYAKCGSISTALD+FYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YICSKGIYLNDNLSAAIIDMYAKCGSISTALDLFYQIRDKASTVSPWNAIICGLAMHGHA 540
Query: 541 NLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGC 600
N SL IFS+LQRR+I LNSITFLGVLGACCHAGLVELGE+YFWSMKSVYGIEPNIKHYGC
Sbjct: 541 NSSLGIFSNLQRRSIMLNSITFLGVLGACCHAGLVELGEKYFWSMKSVYGIEPNIKHYGC 600
Query: 601 LVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRAGRL+EAEE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH
Sbjct: 601 LVDLLGRAGRLREAEERIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
Query: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGV 702
GAGRVLLSNLYADAG+WEDASLVRRAMQ QRMIRSPGCS V
Sbjct: 661 GAGRVLLSNLYADAGMWEDASLVRRAMQGQRMIRSPGCSVV 701
BLAST of Lcy01g001910 vs. ExPASy TrEMBL
Match:
A0A1S4E227 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497919 PE=4 SV=1)
HSP 1 Score: 1205.7 bits (3118), Expect = 0.0e+00
Identity = 601/703 (85.49%), Postives = 649/703 (92.32%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSF-TPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDY 60
M+VSSI K FPR I IPLSF PL+LKWVSTFS IES+ LQ+L +F NGRPS S LD
Sbjct: 1 MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSKIESSPCPLQNLSTFLNGRPSSSSLDC 60
Query: 61 ELSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFD 120
ELS+VSALK CAS+SAI GQQIHAIV K GF+SNTFILNSLINMY KCG L+ ARLLFD
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 121 SCSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEV 180
SCS LDSVSCNIM+SGY+KLRQLENARQLF KMP+RGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYIKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCV 240
FKDMRSAGVAPNEVTMASVMSACSHIGGIWNC MLHALVIKL+F GLVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCCMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGY 300
SSLKDA+RLF+EMPVRNTVSWNVMLKG+VKSGLVD+ARELFERIPERDV SWATMIDG+
Sbjct: 241 FSSLKDAKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWATMIDGF 300
Query: 301 VQVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYD 360
VQ+KRL EALL+YSAMRKS PNEV+IVDLLSACGQSVSIDEGRQFHS+IVK GF C+D
Sbjct: 301 VQMKRLREALLLYSAMRKSDFHPNEVLIVDLLSACGQSVSIDEGRQFHSLIVKNGFVCFD 360
Query: 361 FIQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEK 420
FIQ+TI+SFYAACGRIDLA LQYQMSDK+H+TSSN +IVGFTK MI+QARQIFD+MP K
Sbjct: 361 FIQSTIVSFYAACGRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPVK 420
Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAH 480
DVFSWSTMISGYAQNELPDMALELFH M+VS +EPNEITMVSVFS+IAALGKL EGR H
Sbjct: 421 DVFSWSTMISGYAQNELPDMALELFHAMIVSKIEPNEITMVSVFSAIAALGKLPEGRWTH 480
Query: 481 EYVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGH 540
EYV NKAIPLNDNLSAA+IDMYAKCGSI TALDVF+QI+DK STVSPWNAIICGLAMHG
Sbjct: 481 EYVSNKAIPLNDNLSAAIIDMYAKCGSIDTALDVFHQIKDKTSTVSPWNAIICGLAMHGD 540
Query: 541 ANLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYG 600
ANLSLEIFS+LQ+RNIKLNSITFLGVLGACCHAGLVE+GERYFWSMK+ +G+EPNIKHYG
Sbjct: 541 ANLSLEIFSNLQKRNIKLNSITFLGVLGACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600
Query: 601 CLVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
CLVDLLGR GRL+EAEEI+RTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPS 660
Query: 661 HGAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
HG GRVLLSNLYADAGLWEDA+LVRRAM+S+RMIRSPG SGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAMRSRRMIRSPGYSGVV 703
BLAST of Lcy01g001910 vs. ExPASy TrEMBL
Match:
A0A0A0KC16 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239150 PE=4 SV=1)
HSP 1 Score: 1203.3 bits (3112), Expect = 0.0e+00
Identity = 602/703 (85.63%), Postives = 649/703 (92.32%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSF-TPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDY 60
M+VSSI K FPR I IPLSF PL+LKWVSTFSTIES+ R LQ+L SF NGRPS S LD
Sbjct: 1 MVVSSIPKFFPRPIAIPLSFPPPLYLKWVSTFSTIESSPRPLQNLSSFLNGRPSSSSLDC 60
Query: 61 ELSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFD 120
ELS+VSALK CAS+SAI GQQIHAIV K GF+SNTFILNSLINMY KCG L+ ARLLFD
Sbjct: 61 ELSVVSALKYCASSSAISSGQQIHAIVLKYGFNSNTFILNSLINMYVKCGLLSSARLLFD 120
Query: 121 SCSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEV 180
SCS LDSVSCNIM+SGYVKLRQLENARQLF KMP+RGCVSYTTMILGLAQNDCW EAIEV
Sbjct: 121 SCSVLDSVSCNIMMSGYVKLRQLENARQLFAKMPERGCVSYTTMILGLAQNDCWGEAIEV 180
Query: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCV 240
FKDMRSAGVAPNEVTMASVMSACSHIGGIWNC MLHALVIKL+F GLVLISTNLLHMYCV
Sbjct: 181 FKDMRSAGVAPNEVTMASVMSACSHIGGIWNCRMLHALVIKLHFFGLVLISTNLLHMYCV 240
Query: 241 CSSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGY 300
SSLKD +RLF+EMPVRNTVSWNVMLKG+VKSGLVD+ARELFERIPERDV SWA MIDG+
Sbjct: 241 FSSLKDTKRLFNEMPVRNTVSWNVMLKGYVKSGLVDQARELFERIPERDVFSWAIMIDGF 300
Query: 301 VQVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYD 360
VQ+KRL +ALL+YSAMRKS L PNEV+IVDLLSACGQSVSI+EGRQFHS+IVK GF C+D
Sbjct: 301 VQMKRLRKALLLYSAMRKSDLHPNEVLIVDLLSACGQSVSIEEGRQFHSLIVKNGFVCFD 360
Query: 361 FIQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEK 420
FIQATIISFYAAC RIDLA LQYQMSDK+H+TSSN +IVGFTK MI+QARQIFD+MPEK
Sbjct: 361 FIQATIISFYAACRRIDLAYLQYQMSDKSHLTSSNVMIVGFTKNGMIDQARQIFDMMPEK 420
Query: 421 DVFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAH 480
DVFSWSTMISGYAQNELPD+AL+LFHGM+ S VEPNEITMVSVFS+IAALGKL EGR AH
Sbjct: 421 DVFSWSTMISGYAQNELPDVALDLFHGMIDSKVEPNEITMVSVFSAIAALGKLPEGRWAH 480
Query: 481 EYVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGH 540
EYVCNK IPLNDNLSAA+IDMYAKCGSI TALDVF QI+DK STVSPWNAIICGLAMHGH
Sbjct: 481 EYVCNKVIPLNDNLSAAIIDMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGH 540
Query: 541 ANLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYG 600
ANLSLEIFS+LQRR+IKLNSITFLGVL ACCHAGLVE+GERYFWSMK+ +G+EPNIKHYG
Sbjct: 541 ANLSLEIFSNLQRRSIKLNSITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYG 600
Query: 601 CLVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPS 660
CLVDLLGR GRL+EAEEI+RTMPMKADVVIWGTLLA+ RTHGEVEIGERAAE+LARL+PS
Sbjct: 601 CLVDLLGRVGRLREAEEIVRTMPMKADVVIWGTLLASSRTHGEVEIGERAAENLARLQPS 660
Query: 661 HGAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
HG GRVLLSNLYADAGLWEDA+LVRRA+QSQRMIRSPG SGVV
Sbjct: 661 HGPGRVLLSNLYADAGLWEDAALVRRAIQSQRMIRSPGYSGVV 703
BLAST of Lcy01g001910 vs. NCBI nr
Match:
XP_023548174.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1279.6 bits (3310), Expect = 0.0e+00
Identity = 634/702 (90.31%), Postives = 672/702 (95.73%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSFTPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDYE 60
MLV +I KLFPRRITIPLSFTPL+ KWVSTFS I +SR L +L SFFNGRPSG CLDYE
Sbjct: 1 MLVFAIPKLFPRRITIPLSFTPLYPKWVSTFSPIGPSSRPLHNLTSFFNGRPSGKCLDYE 60
Query: 61 LSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDS 120
LSLVSALKSCAS+SAIFQGQQIHA V KSGFDSNTFILNSLINMYAKCG +ADARLLFDS
Sbjct: 61 LSLVSALKSCASSSAIFQGQQIHAAVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVF 180
CS LDSVSCNIMLSGYVKLRQLENARQLFDKMP+RGCVSYTTMILGLAQNDCW EAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIGGIWNCLMLHALVIKL+F+GLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYV 300
SSLKDARRLF+EMPVRNTVSWNVMLKG+VKS LVD+A ELF+RIPERDVISWATMIDG+V
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSDLVDKAIELFDRIPERDVISWATMIDGFV 300
Query: 301 QVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDF 360
+VK+L EALLM+SAMRKS L PNEVMIVDLLSACGQS+SIDEGRQ HS+IVKTGFDCYDF
Sbjct: 301 RVKQLREALLMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKD 420
+QAT+ISFY+ACGRI+LA LQYQ+SDK+H+ +SNALIVGF K RMI+QARQIFDVMPEKD
Sbjct: 361 MQATLISFYSACGRIELAYLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHE 480
VFSWSTMISGYAQNELPDMALELFHGMVVSG+EPNEITMVSVFS+IAA GKLAEGR AHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAAVIDMYAKCGSI TA+DVFYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSIRTAMDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
Query: 541 NLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGC 600
NLSLEIFSDLQRR+IKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG+EPNIKHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RL+EAEE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
GAGRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
BLAST of Lcy01g001910 vs. NCBI nr
Match:
KAG6575019.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1270.8 bits (3287), Expect = 0.0e+00
Identity = 629/702 (89.60%), Postives = 670/702 (95.44%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSFTPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDYE 60
MLV +I KLFPRRITIPLSFT L+ KWVSTFSTI +SR L +L SFFNGRPSG+CLDYE
Sbjct: 1 MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
Query: 61 LSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDS 120
LSLVSALKSCAS+SAIFQGQQIHA V KSGFDSNT+ILNSLINMYAKCG +ADARLLFDS
Sbjct: 61 LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTYILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVF 180
CS LDSVSCNIMLSGYVKLRQLENAR LFDKMP+RGCVSYTTMILGLAQNDCW EAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIGGIWNCLMLHALVIKL+F+GLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYV 300
SS KDARRLF+EMPVRNTVSWNVMLKG+VKSGLVD+A ELF+RIPE+DVISWATMIDG+V
Sbjct: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
Query: 301 QVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDF 360
QVK+L EALLM+SAMRK L PNEVMIVDLLSACGQS+SIDEGRQ HS+IVKTGFDCYDF
Sbjct: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKD 420
+QAT+ISFY+ACGRI+LA LQYQ+SDK+H+ +SNALIVGF K RMI+QARQIFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHE 480
VFSWSTMISGYAQNELPDMALELFHGMVVSG+EPNEITMVSVFS+IAA GKLAEGR AHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAAVIDMYAKCGSISTA+D+FYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
Query: 541 NLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGC 600
NLSLEIFSDLQ R+IKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG+EPNIKHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RL+EAEE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
GAGRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
BLAST of Lcy01g001910 vs. NCBI nr
Match:
KAG7013592.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1269.6 bits (3284), Expect = 0.0e+00
Identity = 629/702 (89.60%), Postives = 669/702 (95.30%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSFTPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDYE 60
MLV +I KLFPRRITIPLSFT L+ KWVSTFSTI +SR L +L SFFNGRPSG+CLDYE
Sbjct: 1 MLVFAIPKLFPRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
Query: 61 LSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDS 120
LSLVSALK CAS+SAIFQGQQIHA V KSGFDSNTFILNSLINMYAKCG +ADARLLFDS
Sbjct: 61 LSLVSALKYCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVF 180
CS LDSVSCNIMLSGYVKLRQLENAR LFDKMP+RGCVSYTTMILGLAQNDCW EAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIGGIWNCLMLHALVIKL+F+GLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYV 300
SS KDARRLF+EMPVRNTVSWNVMLKG+VKSGLVD+A ELF+RIPE+DVISWATMIDG+V
Sbjct: 241 SSSKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
Query: 301 QVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDF 360
QVK+L EALLM+SAMRK L PNEVMIVDLLSACGQS+SIDEGRQ HS+IVKTGFDCYDF
Sbjct: 301 QVKQLREALLMFSAMRKGDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKD 420
+QAT+ISFY+ACGRI+LA LQYQ+SDK+H+ +SNALIVGF K RMI+QARQIFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHE 480
VFSWSTMISGYAQNELPDMALELFHGMVVSG+EPNEITMVSVFS+IAA GKLAEGR AHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAAVIDMYAKCGSISTA+D+FYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
Query: 541 NLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGC 600
NLSLEIFSDLQ R+IKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG+EPNIKHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RL+EAEE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
GAGRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
BLAST of Lcy01g001910 vs. NCBI nr
Match:
XP_023006214.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita maxima])
HSP 1 Score: 1268.8 bits (3282), Expect = 0.0e+00
Identity = 629/702 (89.60%), Postives = 670/702 (95.44%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSFTPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDYE 60
MLV +I KLF RRITIPLSFTPL+ KWVS+FSTI +SR L +L SFFNGRPSG+CLDYE
Sbjct: 1 MLVFAIPKLFSRRITIPLSFTPLYPKWVSSFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
Query: 61 LSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDS 120
LSLVSALKSCAS+SAIFQGQQIHA V KSGFDSNTFILNSLINMYAKCG +ADARLLFDS
Sbjct: 61 LSLVSALKSCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVF 180
CS LDSVSCNIMLSGYVKLRQLENAR LFDKMP+RGCVSYTTMILGLAQNDCW EAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARHLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIGGIWNCLMLHALVIKL+F+GLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYV 300
SSLKDARRLF+EMPVRNTVSWNVMLKG+VKSGLVD+A ELF+RIPE+DVISWATMIDG+V
Sbjct: 241 SSLKDARRLFNEMPVRNTVSWNVMLKGYVKSGLVDKAIELFDRIPEKDVISWATMIDGFV 300
Query: 301 QVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDF 360
QVK+L EAL M+SAMRKS L PNEVMIVDLLSACGQS+SIDEGRQ HS+IVKTGFDCYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKD 420
+QAT+ISFY+ACGRI+LA LQYQ+SDK+H+ +SNALIVGF K RMI+QARQIFDVMPEKD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPEKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHE 480
VFSWSTMISGYAQNELPD+ALELFHGMVV GV NEITMVSVFS+IAA GKLAEGR AHE
Sbjct: 421 VFSWSTMISGYAQNELPDVALELFHGMVVRGVVANEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAAVIDMYAKCGSISTA++VFYQIRDKASTVSPWNA+ICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMNVFYQIRDKASTVSPWNAVICGLAMHGHA 540
Query: 541 NLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGC 600
NLSLEIFSDLQRR+IKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG+EPNIKHYGC
Sbjct: 541 NLSLEIFSDLQRRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RL+EAEE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 702
BLAST of Lcy01g001910 vs. NCBI nr
Match:
XP_022959003.1 (pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita moschata])
HSP 1 Score: 1267.3 bits (3278), Expect = 0.0e+00
Identity = 629/702 (89.60%), Postives = 669/702 (95.30%), Query Frame = 0
Query: 1 MLVSSITKLFPRRITIPLSFTPLHLKWVSTFSTIESTSRSLQDLPSFFNGRPSGSCLDYE 60
M V +I KLF RRITIPLSFT L+ KWVSTFSTI +SR L +L SFFNGRPSG+CLDYE
Sbjct: 1 MPVFAIPKLFSRRITIPLSFTSLYPKWVSTFSTIGPSSRPLHNLTSFFNGRPSGNCLDYE 60
Query: 61 LSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDS 120
LSLVSALK CAS+SAIFQGQQIHA V KSGFDSNTFILNSLINMYAKCG +ADARLLFDS
Sbjct: 61 LSLVSALKYCASSSAIFQGQQIHATVLKSGFDSNTFILNSLINMYAKCGHIADARLLFDS 120
Query: 121 CSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVF 180
CS LDSVSCNIMLSGYVKLRQLENARQLFDKMP+RGCVSYTTMILGLAQNDCW EAIE+F
Sbjct: 121 CSGLDSVSCNIMLSGYVKLRQLENARQLFDKMPERGCVSYTTMILGLAQNDCWREAIEIF 180
Query: 181 KDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVC 240
KDMRSAGVAPNEVT+ASVMSACSHIGGIWNCLMLHALVIKL+F+GLVLISTNLLHMYCVC
Sbjct: 181 KDMRSAGVAPNEVTIASVMSACSHIGGIWNCLMLHALVIKLHFIGLVLISTNLLHMYCVC 240
Query: 241 SSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYV 300
SSLKDARRLF+EMP+RNTVSWNVMLKG+VKSGLVD+A ELF+RIPERDVISWATMIDG+V
Sbjct: 241 SSLKDARRLFNEMPMRNTVSWNVMLKGYVKSGLVDKAIELFDRIPERDVISWATMIDGFV 300
Query: 301 QVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDF 360
QVK+L EAL M+SAMRKS L PNEVMIVDLLSACGQS+SIDEGRQ HS+IVKTGFDCYDF
Sbjct: 301 QVKQLREALSMFSAMRKSDLHPNEVMIVDLLSACGQSISIDEGRQLHSIIVKTGFDCYDF 360
Query: 361 IQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKD 420
+QAT+ISFY+ACGRI+LA LQYQ+SDK+H+ +SNALIVGF K RMI+QARQIFDVMP KD
Sbjct: 361 MQATLISFYSACGRIELANLQYQVSDKSHLATSNALIVGFMKNRMIDQARQIFDVMPAKD 420
Query: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHE 480
VFSWSTMISGYAQNELPDMALELFHGMVVSG+EPNEITMVSVFS+IAA GKLAEGR AHE
Sbjct: 421 VFSWSTMISGYAQNELPDMALELFHGMVVSGLEPNEITMVSVFSAIAASGKLAEGRWAHE 480
Query: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHA 540
YVCNKAIPLNDNLSAAVIDMYAKCGSISTA+D+FYQIRDKASTVSPWNAIICGLAMHGHA
Sbjct: 481 YVCNKAIPLNDNLSAAVIDMYAKCGSISTAMDMFYQIRDKASTVSPWNAIICGLAMHGHA 540
Query: 541 NLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGC 600
NLSLEIFSDLQ R+IKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG+EPNIKHYGC
Sbjct: 541 NLSLEIFSDLQGRSIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGVEPNIKHYGC 600
Query: 601 LVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSH 660
LVDLLGRA RL+EAEE IRTMPMKADVVIWGTLLAACRTHGEVEIGERAAE+LARLEPSH
Sbjct: 601 LVDLLGRAARLREAEETIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAENLARLEPSH 660
Query: 661 GAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
GAGRVLLSNLYADAGLWEDASLVR+AMQSQRMIRSPGCSGVV
Sbjct: 661 GAGRVLLSNLYADAGLWEDASLVRKAMQSQRMIRSPGCSGVV 702
BLAST of Lcy01g001910 vs. TAIR 10
Match:
AT5G19020.1 (mitochondrial editing factor 18 )
HSP 1 Score: 794.7 bits (2051), Expect = 6.2e-230
Identity = 391/652 (59.97%), Postives = 505/652 (77.45%), Query Frame = 0
Query: 53 SGSCLDYELSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLA 112
SG D E +LVSAL SCAS++ + G+QIH V KSG DSN +I NS++NMYAKC LA
Sbjct: 34 SGESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLA 93
Query: 113 DARLLFDSCSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDC 172
DA +F +KLDS S NIM+ GYV+ R+L +A +LFD MP+R CVSYTT+I G AQN+
Sbjct: 94 DAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQ 153
Query: 173 WSEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTN 232
WSEA+E+F++MR+ G+ NEVT+A+V+SACSH+GGIW+C ML +L IKL G V +STN
Sbjct: 154 WSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTN 213
Query: 233 LLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISW 292
LLHMYC+C LKDAR+LF EMP RN V+WNVML G+ K+GL+++A ELF++I E+D++SW
Sbjct: 214 LLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSW 273
Query: 293 ATMIDGYVQVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVK 352
TMIDG ++ +L EAL+ Y+ M + ++P+EVM+VDLLSA +SV +G Q H IVK
Sbjct: 274 GTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVK 333
Query: 353 TGFDCYDFIQATIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQI 412
GFDCYDF+QATII FYA I LA Q++ S K+H+ S NALI GF K M+EQAR++
Sbjct: 334 RGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREV 393
Query: 413 FDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSG-VEPNEITMVSVFSSIAALGK 472
FD +KD+FSW+ MISGYAQ+ P +AL LF M+ S V+P+ ITMVSVFS+I++LG
Sbjct: 394 FDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGS 453
Query: 473 LAEGRLAHEYVCNKAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRD-KASTVSPWNAI 532
L EG+ AH+Y+ IP NDNL+AA+IDMYAKCGSI TAL++F+Q ++ +ST+SPWNAI
Sbjct: 454 LEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAI 513
Query: 533 ICGLAMHGHANLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYG 592
ICG A HGHA L+L+++SDLQ IK NSITF+GVL ACCHAGLVELG+ YF SMKS +G
Sbjct: 514 ICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHG 573
Query: 593 IEPNIKHYGCLVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAA 652
IEP+IKHYGC+VDLLG+AGRL+EA+E+I+ MP+KADV+IWG LL+A RTHG VEI E AA
Sbjct: 574 IEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAA 633
Query: 653 ESLARLEPSHGAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGVV 703
LA ++PSHG +V+LSN+YADAG WED +LVR M+++ + S SGVV
Sbjct: 634 TELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGVV 685
BLAST of Lcy01g001910 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 424.9 bits (1091), Expect = 1.3e-118
Identity = 232/637 (36.42%), Postives = 363/637 (56.99%), Query Frame = 0
Query: 68 KSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDSCSKLDSV 127
KS ++ F Q +H V KSG + +++N+L+N+Y+K G AR LFD +
Sbjct: 22 KSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAF 81
Query: 128 SCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEVFKDMRSAG 187
S N +LS Y K +++ + FD++P R VS+TTMI+G + +AI V DM G
Sbjct: 82 SWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEG 141
Query: 188 VAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVCSSLKDAR 247
+ P + T+ +V+++ + + +H+ ++KL G V +S +LL+MY C A+
Sbjct: 142 IEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201
Query: 248 RLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYVQVKRLSE 307
+F M VR+ SWN M+ ++ G +D A FE++ ERD+++W +MI G+ Q
Sbjct: 202 FVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLR 261
Query: 308 ALLMYSAM-RKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDFIQATII 367
AL ++S M R S L P+ + +LSAC + G+Q HS IV TGFD + +I
Sbjct: 262 ALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALI 321
Query: 368 SFYAACGRIDLA--CLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKDVFSW 427
S Y+ CG ++ A ++ + + + AL+ G+ K + QA+ IF + ++DV +W
Sbjct: 322 SMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAW 381
Query: 428 STMISGYAQNELPDMALELFHGMVVSGVEPNEITMVSVFSSIAALGKLAEGRLAHEYVCN 487
+ MI GY Q+ A+ LF MV G PN T+ ++ S ++L L+ G+ H
Sbjct: 382 TAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVK 441
Query: 488 KAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHANLSL 547
+ ++S A+I MYAK G+I++A F IR + TVS W ++I LA HGHA +L
Sbjct: 442 SGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS-WTSMIIALAQHGHAEEAL 501
Query: 548 EIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGCLVDL 607
E+F + ++ + IT++GV AC HAGLV G +YF MK V I P + HY C+VDL
Sbjct: 502 ELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDL 561
Query: 608 LGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGAGR 667
GRAG L+EA+E I MP++ DVV WG+LL+ACR H +++G+ AAE L LEP +
Sbjct: 562 FGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 621
Query: 668 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGV 702
L+NLY+ G WE+A+ +R++M+ R+ + G S +
Sbjct: 622 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
BLAST of Lcy01g001910 vs. TAIR 10
Match:
AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 398.3 bits (1022), Expect = 1.3e-110
Identity = 235/666 (35.29%), Postives = 354/666 (53.15%), Query Frame = 0
Query: 43 DLPSFFNGRPSGSCLDYELSLVSALKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLI 102
DL SF + P LD S +KS SAI+ + +HA V KSGF + FI N LI
Sbjct: 12 DLSSFTDSSPFAKLLD------SCIKS--KLSAIYV-RYVHASVIKSGFSNEIFIQNRLI 71
Query: 103 NMYAKCGRLADARLLFDSCSKLDSVSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTT 162
+ Y+KCG L D R +FD + + + N +++G KL L+ A LF MP+R ++ +
Sbjct: 72 DAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNS 131
Query: 163 MILGLAQNDCWSEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLN 222
M+ G AQ+D EA+ F M G NE + ASV+SACS + + + +H+L+ K
Sbjct: 132 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 191
Query: 223 FVGLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFE 282
F+ V I + L+ MY C ++ DA+R+F EM RN VSWN ++ F ++G EA ++F+
Sbjct: 192 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 251
Query: 283 RIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDE 342
M +S ++P+EV + ++SAC +I
Sbjct: 252 -------------------------------MMLESRVEPDEVTLASVISACASLSAIKV 311
Query: 343 GRQFHSMIVKTGFDCYDFIQA-TIISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFT 402
G++ H +VK D I + + YA C RI A + +V + ++I G+
Sbjct: 312 GQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYA 371
Query: 403 KKRMIEQARQIFDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSGVEPNEITMVS 462
+ AR +F M E++V SW+ +I+GY QN + AL LF + V P + +
Sbjct: 372 MAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFAN 431
Query: 463 VFSSIAALGKLAEGRLAHEYVCNKAIPLNDN------LSAAVIDMYAKCGSISTALDVFY 522
+ + A L +L G AH +V + ++IDMY KCG + VF
Sbjct: 432 ILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFR 491
Query: 523 QIRDKASTVSPWNAIICGLAMHGHANLSLEIFSDLQRRNIKLNSITFLGVLGACCHAGLV 582
++ ++ WNA+I G A +G+ N +LE+F ++ K + IT +GVL AC HAG V
Sbjct: 492 KMMERDCV--SWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFV 551
Query: 583 ELGERYFWSMKSVYGIEPNIKHYGCLVDLLGRAGRLKEAEEIIRTMPMKADVVIWGTLLA 642
E G YF SM +G+ P HY C+VDLLGRAG L+EA+ +I MPM+ D VIWG+LLA
Sbjct: 552 EEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 611
Query: 643 ACRTHGEVEIGERAAESLARLEPSHGAGRVLLSNLYADAGLWEDASLVRRAMQSQRMIRS 702
AC+ H + +G+ AE L +EPS+ VLLSN+YA+ G WED VR++M+ + + +
Sbjct: 612 ACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ 635
BLAST of Lcy01g001910 vs. TAIR 10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 384.4 bits (986), Expect = 1.9e-106
Identity = 213/609 (34.98%), Postives = 330/609 (54.19%), Query Frame = 0
Query: 102 INMYAKCGRLADARLLFDSCSKLDSVSCNIMLSGYVK-------LRQLENARQLFDKMPD 161
+++ C L R++ K+ + N LS ++ L A +F + +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 162 RGCVSYTTMILGLAQNDCWSEAIEVFKDMRSAGVAPNEVTMASVMSACSHIGGIWNCLML 221
+ + TM G A + A++++ M S G+ PN T V+ +C+ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 222 HALVIKLNFVGLVLISTNLLHMYCVCSSLKDARRLFSEMPVRNTVSWNVMLKGFVKSGLV 281
H V+KL + + T+L+ MY L+DA ++F + P R+ VS+ ++KG+ G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 282 DEARELFERIPERDVISWATMIDGYVQVKRLSEALLMYSAMRKSALQPNEVMIVDLLSAC 341
+ A++LF+ IP +DV+SW MI GY + EAL ++ M K+ ++P+E +V ++SAC
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 342 GQSVSIDEGRQFHSMIVKTGFDCYDFIQATIISFYAACGRIDLACLQYQMSDKNHVTSSN 401
QS SI+ GRQ H I GF I +I Y+ CG ++ AC
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETAC--------------- 336
Query: 402 ALIVGFTKKRMIEQARQIFDVMPEKDVFSWSTMISGYAQNELPDMALELFHGMVVSGVEP 461
+F+ +P KDV SW+T+I GY L AL LF M+ SG P
Sbjct: 337 ----------------GLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP 396
Query: 462 NEITMVSVFSSIAALGKLAEGRLAHEYVCN--KAIPLNDNLSAAVIDMYAKCGSISTALD 521
N++TM+S+ + A LG + GR H Y+ K + +L ++IDMYAKCG I A
Sbjct: 397 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 456
Query: 522 VFYQIRDKASTVSPWNAIICGLAMHGHANLSLEIFSDLQRRNIKLNSITFLGVLGACCHA 581
VF I K ++S WNA+I G AMHG A+ S ++FS +++ I+ + ITF+G+L AC H+
Sbjct: 457 VFNSILHK--SLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 516
Query: 582 GLVELGERYFWSMKSVYGIEPNIKHYGCLVDLLGRAGRLKEAEEIIRTMPMKADVVIWGT 641
G+++LG F +M Y + P ++HYGC++DLLG +G KEAEE+I M M+ D VIW +
Sbjct: 517 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCS 576
Query: 642 LLAACRTHGEVEIGERAAESLARLEPSHGAGRVLLSNLYADAGLWEDASLVRRAMQSQRM 701
LL AC+ HG VE+GE AE+L ++EP + VLLSN+YA AG W + + R + + M
Sbjct: 577 LLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGM 612
BLAST of Lcy01g001910 vs. TAIR 10
Match:
AT3G22690.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G29760.1); Has 49784 Blast hits to 14716 proteins in 280 species: Archae - 2; Bacteria - 10; Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0; Other Eukaryotes - 904 (source: NCBI BLink). )
HSP 1 Score: 368.6 bits (945), Expect = 1.1e-101
Identity = 206/637 (32.34%), Postives = 339/637 (53.22%), Query Frame = 0
Query: 67 LKSCASNSAIFQGQQIHAIVFKSGFDSNTFILNSLINMYAKCGRLADARLLFDSCSKLDS 126
L +CA + A G QIH ++ K G+ + F+ NSL++ YA+CG
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECG----------------- 200
Query: 127 VSCNIMLSGYVKLRQLENARQLFDKMPDRGCVSYTTMILGLAQNDCWSEAIEV-FKDMRS 186
+L++AR++FD+M +R VS+T+MI G A+ D +A+++ F+ +R
Sbjct: 201 --------------ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRD 260
Query: 187 AGVAPNEVTMASVMSACSHIGGIWNCLMLHALVIKLNFVGLVLISTNLLHMYCVCSSLKD 246
V PN VTM V+SAC+ + + ++A + L+ + L+ MY C+++
Sbjct: 261 EEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV 320
Query: 247 ARRLFSEMPVRNTVSWNVMLKGFVKSGLVDEARELFERIPERDVISWATMIDGYVQVKRL 306
A+RLF E N N M +V+ GL
Sbjct: 321 AKRLFDEYGASNLDLCNAMASNYVRQGLT------------------------------- 380
Query: 307 SEALLMYSAMRKSALQPNEVMIVDLLSACGQSVSIDEGRQFHSMIVKTGFDCYDFIQATI 366
EAL +++ M S ++P+ + ++ +S+C Q +I G+ H +++ GF+ +D I +
Sbjct: 381 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 440
Query: 367 ISFYAACGRIDLACLQYQMSDKNHVTSSNALIVGFTKKRMIEQARQIFDVMPEKDVFSWS 426
I Y C R D A + V + N+++ G+ + ++ A + F+ MPEK++ SW+
Sbjct: 441 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 500
Query: 427 TMISGYAQNELPDMALELFHGM-VVSGVEPNEITMVSVFSSIAALGKLAEGRLAHEYVCN 486
T+ISG Q L + A+E+F M GV + +TM+S+ S+ LG L + + Y+
Sbjct: 501 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 560
Query: 487 KAIPLNDNLSAAVIDMYAKCGSISTALDVFYQIRDKASTVSPWNAIICGLAMHGHANLSL 546
I L+ L ++DM+++CG +A+ +F + ++ VS W A I +AM G+A ++
Sbjct: 561 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--DVSAWTAAIGAMAMAGNAERAI 620
Query: 547 EIFSDLQRRNIKLNSITFLGVLGACCHAGLVELGERYFWSMKSVYGIEPNIKHYGCLVDL 606
E+F D+ + +K + + F+G L AC H GLV+ G+ F+SM ++G+ P HYGC+VDL
Sbjct: 621 ELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDL 680
Query: 607 LGRAGRLKEAEEIIRTMPMKADVVIWGTLLAACRTHGEVEIGERAAESLARLEPSHGAGR 666
LGRAG L+EA ++I MPM+ + VIW +LLAACR G VE+ AAE + L P
Sbjct: 681 LGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 713
Query: 667 VLLSNLYADAGLWEDASLVRRAMQSQRMIRSPGCSGV 702
VLLSN+YA AG W D + VR +M+ + + + PG S +
Sbjct: 741 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSI 713
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| P0C8Q8 | 8.7e-229 | 59.97 | Pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Arabidop... | [more] |
| Q9SHZ8 | 1.8e-117 | 36.42 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
| Q9SIT7 | 1.8e-109 | 35.29 | Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX... | [more] |
| Q9LN01 | 2.7e-105 | 34.98 | Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... | [more] |
| Q9LUJ2 | 1.5e-100 | 32.34 | Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1L1I9 | 0.0e+00 | 89.60 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit... | [more] |
| A0A6J1H4P4 | 0.0e+00 | 89.60 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Cucurbit... | [more] |
| A0A6J1C9E1 | 0.0e+00 | 87.30 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial OS=Momordic... | [more] |
| A0A1S4E227 | 0.0e+00 | 85.49 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial isoform X1 ... | [more] |
| A0A0A0KC16 | 0.0e+00 | 85.63 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G239150 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| XP_023548174.1 | 0.0e+00 | 90.31 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ... | [more] |
| KAG6575019.1 | 0.0e+00 | 89.60 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
| KAG7013592.1 | 0.0e+00 | 89.60 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
| XP_023006214.1 | 0.0e+00 | 89.60 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ... | [more] |
| XP_022959003.1 | 0.0e+00 | 89.60 | pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Cucurbita ... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G19020.1 | 6.2e-230 | 59.97 | mitochondrial editing factor 18 | [more] |
| AT2G22070.1 | 1.3e-118 | 36.42 | pentatricopeptide (PPR) repeat-containing protein | [more] |
| AT2G13600.1 | 1.3e-110 | 35.29 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G08070.1 | 1.9e-106 | 34.98 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT3G22690.1 | 1.1e-101 | 32.34 | CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1685 (InterPro:IPR012... | [more] |
