Lcy01g001890 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g001890
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	mediator of RNA polymerase II transcription subunit 33A
Location	Chr01: 2232081 .. 2238099 (+)
RNA-Seq Expression	Lcy01g001890
Synteny	Lcy01g001890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATATCTGTTCAAAACAGTCTGTGGGACAGTGTTATAGAGCTCACCAAGGTTGCTCAACGGAAGGGAGCTGATCCTCTGCTCTGGGCTATTCAGTTGTCTTCAAATTTGAACTCGGCGGGAGTGGCTTTGCCTTCAGTTGAGCTTGCTAACGTGCTGGTTTCGCACATTTGTTGGGATAATAATGAGCCTGTTTCATGGAAGTTCCTTGAGAAGGCGTTGATGTTGAATATCGTACCCCCAATTCTTGTTCTTGCCTTGCTCACAACCAGGTTCGTTCTCGTTTGTTTTTCTCTCTACTGTTTTGTTCACGTGTTCGTGGAATTTTGATGTTTGAGTTTTGGAACTAGGTATTTTGACGGCAAAGTCGTGTTCTGTGGTTATTCGTTAGCGAGTTGGGTGTAAATCTTGATTGATATGATGAGTTTGGAGCTTGTTTTGATTGAATTTGTTGTAACTGTGAAGAAATTGTAGGGATTCTTCTTTTTCACGATGCTTGCCGCAGTATGGAGCTCGTGTTTTCATGATCCTCTGTGCGCAAGTGCTTGTTACTTATGGCCTGAATTGCGCTTATGTGATCCTGCGTATTGTTTTTACTTTTTTCAATTGAAATTCTGAAGTTATGAGCTGAACTGGAATTCACTGATCATGAATTTATTAGTTTTTGTTCGTACTTTACTAAGTGGTAGCAGTTAGGTTTTAGTGTTTAAACTCGACTATGCAATAGTATAGTACATTTGCGTTCAAGAATAGTCTTTGTTTGCTGATTTCTGCCAAGATTTGGATGAACTCTTGCCGGATGTCAGATCTGTTTGATGTATCTGATGCATTCTGCAGTTGAGTCGCAGTGTAGCTTTTTTTTTTGTTTTTTTTGTTTTTGTGTAAATGGTTCTTCGATTTGCCTGTTTAGCTGTAGAATTTGCTGATTGATTTGCAAGTCATTGTGAACATTGATTGCGAATTAGATCTGATCTGAATTTATCTTGTTTACCTTTCATTTGTTAATTTATAACCAATAAGAAACAGTGTTAATTGTTAATTGTTATTGCTTCTTCCTACAGGGTCATTTCAAGAAGACAATTCCAGCCTGTAGCATATAGACTCTATCTGGAACTCCTTCGAAGACATGCTTTTAAACTTAAATCTCATATCCATGGCCTCAAATACAAAGAGTGAGTTTTATGATTGAGAAGGATAATGAAGTTGAAGCCTGTGACTTCAGTTTTGCTGCTGTTTTTCTCTTTTATATTAATCAGGCACCTGATCTTTTTGTGAAACTGGGGACTGCCCCATTTTCCATGCCAAATCACGTTCAATCTCTGAACTTGATATTTTAAAGATACTTTAGGTTGTTAAGAGACATTTAAGAGGGTTTTTTTTTTTCTTTTTTTTTTTTATAATTTTTTTTAAAATTATTTATTTATTTATTTATTTATTTTTATTTTGAACAGTCTCAGACTCTCAACTAACAAACCTAGGGAGAGTTTTGCTTAATGGTTCCTCTCTTACAACTTTTTTTTTTCATTAAGGGACATAGAAATTGTGACGATGGTGTTTTACTACCTTTTCTGGATCTTGACAATCCTCTTGACCCTGACATGTTCTATTTTGTAATTCTTTTTTTTTTTCCTTTGGGAGCCATAATTCTACTTCATAGGACGAGGAAATGTTCAATTTCTTGTTTCTTTATGGATGTCATCATCCATCTTTCCATTTTTTGCCATAATGGAGCTCTATATCTTGTTAAGCATCCCGACCTCAACTTCACAAATGGTAGCAACAGCTCGTAGTTCTGTACTTCGCAGGACAGTAGCTGCTTAAAAATCAATTGCCATGTCCATGCAATCTTTTCCCCTATTAGTTGGCATGTGCATCTTAGAGAATATACGAAAGAAAAAAAAAGTTTCAAAATGCAAACATCATTATATGAGACGATTTTAGATATTCGGGTTTTCTTAAATTTAATCCCAAAGATTTCTTAGGATTCCTACCCAGGCCAATGGGTTTATATATATTGTTTAATACTTCCTATATTGTTGATACTTTATGATAAATATTGCAACATATCTTTATTCTATAATTTACTCTAGAAGATTAGTGAATCATAGAATTGAGTGTACAAACCAAGGATTACTGGAATAATATTTTCTTTGTTGATACCATAACTTCGGTTTTTGATTGTGCTTCTGCTTCTTCTGCTTGTTAGTGTCATGTATACATCTTTAATAATAATCTTGTCTCTCTTTTATACAGGGTCATGGCATCTGTTGATGCTGTTCTTCGTCTTTCTGAGACATTCAATTTGCCAGCAAATGATCCTGGGACCCTTGTGGTTGAGTTTATATTTTCAATTATCTGGCAGTTGCTCGAAGCAACACTTGTTGATGAAGGGTTACTGGAACTTATCGTGGAAGAGAAATCCAAATGGCCAACAAAACCTCAAGAAATGGAAATAGATGGTCACAATGGTTATGATGATAAATGGACTGAACAACGTGAGAGATTGCGGAATGTAAATGTTGAACTGGCAATTGAGATAATTGGGAAGTTTCTTCAAGATACGGTTACTTCAAGGATTCTTCGGTTGGCTTGCAGGAATATGTAAGGACACTTAAAACTCTAGTTTTTCTTTGTGAGATCGAAGTAGAACAATATGAATAAACTTAATGAGGAAAACTATTCAACGCAACTAAGCATTATTTTTCTATTTATATCATTAAACTTATATTTAGTCATAAACCACTTGTGGAAAATATCATAACCAAATAAATGGTTTGTGTATCTTTTCTATCATTGTTTTCTTCAACCTTCTTCTTACAAATTTCCAGGCCTTCACATTGGGCAGATCTCATTCAGCGACTCCAGTTGCTTGGAGAAAATTCTTCAGTATTAAGAAACTCAAAATCTCTGAACTCAGAGATTTTTCTGCAGTTCACTTCTGATACTTGGACAATCTTCTCTCAAGAATGCAAACAAAATTCACTGCAGAAATTCCATCCAATTAGGGCTTTCGGATCTCCAGCAGCTTCTGCTAGTTTGTGTCAAAGAACTCGGTATTCTGCACTTTGGCTTCCACTTGATCTAGTTCTAGAAGATGCAATGGATGGATATCAAGTAGAAGCGACAAGTGCTATTGAAAAAATAACCAGTACAATCAATTTTTATCCCTAGTTTTCTATAATTTCTACTCATATACATGAATCCTATCAGTTTGTACAAGAAAAGTATACATGAAAGTGAACTCATCTTTAACTTCTTGCAGGTTTGGTCAAAACCCTTAAGGCAATAAATGGAACCAGTTGGCATGATACCTTCTTGGATCTCTGGATAGCAGCTCTTCGTCTTGTTCAAAGGGTTAGAATTCTTTTGGCCTGAATACTGAATAGATTATTTAATGTATATTAAAATAAAAGAAGACTATTCTGATGAAAGGACATATCTATTTTTATCGTAGAACCACTCAATACTAACACCTATTTTATCTACAGTAGATCCCAAGCCCATTATGAAAATTTCAATCAGTATAATTGTCTGGTCTATTTGGTTTAACATTGTTGCCCATAAGTCTAACATGCAACTTAGATATTTAGTGATGATTGCCTTTTCGTCTAACAATGTTGCAGAATATATTCATTTATTGTTCTGTTTTGATGTTTATATTGGTTTACTTCATTAATAAGATTTAGGTAAAAGTGGTCTGATATTCTTATTTGCGAAATGTTGAAAAGGAAAGGGATCCCATTGAGGGGCCTGTGCCTCGCATAGATACTCGTCTATGCCTTCTATTGTGTATCACAGTCCTTGTGATTGCTGATCTGATTGAAGAGGAAGAAAGTACAACAGTTGATGAAACGGAGTATGGTGCCTCCAATCACTGGAAAGAAAAGAAGGCTCCTGGAAAGTGTCGCAATGAATTAATTTCTAGCCTACAGATATTGGGGGAATATCAGAGCTTGCTGACTCCTCCTCAGGGTGTTATCTCTGCATGCAATCAGGCGGCTGCCAAAGCAATGATGTTTGTATCTGGAATCAATGTTAGTAATGCATATTTTGAATGCATGAATATGAAAGACATGCCAATGAACTCTTGTAAGTATTATATCTTCTTTTTAAGCATCAACTATAATAATTATGAAATCCACTGGCATTGCAACTGTTTGTTATGAATAAATGTATACTTTCATATGATAAAATATTTTGGCTTGGAGAAGAAATATTAGTGGGTATATCAGATCATTATATTGAAAGAGTTTATGTTTGATATCCTAATATGACAGAATAAAAGTTTAATTGGTTTGAATGTCCGATTGTTAGTACACAAGAAAATTGCAGGGTAAGGGACTGGAAGGCAATATAAGCACACATGGCATTTATATTCTTCCGAGTGCATTGTTTAATTCTGATGTCCTAGAATGTTGTCGATCACCTTTTTTTTTTCTCCTAAGCATATTTTCTTATGTGAATTATTATTCAACTATAATTCATTGTCCTGGGTTTTTTTGGTTGATTTCTTGCCTTTATTTGTTGCTAGTCCCGTACATTATTAGATACTTTGATGCTTCTTTTTCCCAAGTAATATGTACTTTCTAGTTATATGAGTATTTAGTTCTTTAAAAGAGAAGCTAGCAGTCTGCGGCTGTTGACTACTCCCTAACAATTTTATTTTGTGCCCTTAGCAGCTGGAAACATGCGTCATTTGATTGTTGAGGCTTGTATTGCTAGAAATCTCCTGGATACATCTGCATATTTCTGGCGAGGCTATGTGAACGGATGCATTAACCAAATGCCTCAAAGTATACCACCTCAACCACCTGGTTGGTCAGCTTTCATGAAGGGGGCTCCACTTAATCATATAATGATAAATGCCTTAACTTCAACTCCTGCTTCAAGGTACACACACTTTAATGAAACTACTCTTGGCCCTTTTTGGCTTTTTCCTTTTCTGTTTGGAACATTGGAAGTCTGGAACTTCATGTCAAAAGACATGTAATGCTATCATGCATTTTATTCAATGCTTGTACTGGTTTCCTTGTTGTAAAGGAAGTCTCCACCAACATTAAATGATAATATAAATTACTAAAAGAATTTATATTGGGAAGATTACATATAGAGTAGTTCTACAATCTTTGTTAATTTCTGTTCAGGCTGGTTTTGAACATCCAGCAAATGGAATATTCCTACCTACTCCCCTTTGACCTATAGGTATATTCTTTTTAACTACTATTTATGGATCTTGATTTGCAAAAATCAGTGTGCTCAACCTTATTATACTAAAATTTAATTGGTTTGTTAAAAAAAAAAAAAAAAAAAGAAGAAAAAATGAAGAAAAACAAAAAGAAATCTCATCAAAGAACATGTTTAAATAAGATATCGCTTACTCAAACAACCAAAAGGATTACAAATGTGAAAAAAGAAAGAAACCTTCAACGGGCATGAATAGTAAAAAGAAAATAATTACAAATACTTTTTAATCATGCTCTACTTAGAAGGTTGTAAGGCAATAAAATCCTTCACCTCTAAAGTTGTTTCTAGTTGCATAGCTTAACTGGTTTAATCATTATAACACCCAAAAGGCTGAGGTGAGAATTCTCACCTCCACATATTATTGAACTTAAAAAGAAAAGGTTGTTCCTAGACTCTCCTTACAAAAGTCCATGGTTCCTTCCAATCCAAAGCACCCACACCATAGTATGATAGTATTAATTCTCAGTATTTCGATTTACCTGTCACTGAAGCCATGACCCAAACGTAGTAGGATTGAAGAATGTTGGACATAGGATTTTGCCAAGTAATCTTATGGAGAGAATGTGTCAAATATTGATTTGATCAAATATGGATGGCTTTCAGATTAGCTCTCTTGTTTACTTATGGCCTGTTCTTCAGTTGTTCCTTTTTTTTTTTCTTTTCCATGAAGCCAGGTATATCCGATGCTCTTTTTTTGTAAATTTACCAAAAGGTCTGAATTTTAAGCTCATGGGTTTGATGGAAGCTTAGCAGAACTGGAGAAAATATTTGA

mRNA sequence

ATGGCGATATCTGTTCAAAACAGTCTGTGGGACAGTGTTATAGAGCTCACCAAGGTTGCTCAACGGAAGGGAGCTGATCCTCTGCTCTGGGCTATTCAGTTGTCTTCAAATTTGAACTCGGCGGGAGTGGCTTTGCCTTCAGTTGAGCTTGCTAACGTGCTGGTTTCGCACATTTGTTGGGATAATAATGAGCCTGTTTCATGGAAGTTCCTTGAGAAGGCGTTGATGTTGAATATCGTACCCCCAATTCTTGTTCTTGCCTTGCTCACAACCAGGGTCATTTCAAGAAGACAATTCCAGCCTGTAGCATATAGACTCTATCTGGAACTCCTTCGAAGACATGCTTTTAAACTTAAATCTCATATCCATGGCCTCAAATACAAAGAGGTCATGGCATCTGTTGATGCTGTTCTTCGTCTTTCTGAGACATTCAATTTGCCAGCAAATGATCCTGGGACCCTTGTGGTTGAGTTTATATTTTCAATTATCTGGCAGTTGCTCGAAGCAACACTTGTTGATGAAGGGTTACTGGAACTTATCGTGGAAGAGAAATCCAAATGGCCAACAAAACCTCAAGAAATGGAAATAGATGGTCACAATGGTTATGATGATAAATGGACTGAACAACGTGAGAGATTGCGGAATGTAAATGTTGAACTGGCAATTGAGATAATTGGGAAGTTTCTTCAAGATACGGTTACTTCAAGGATTCTTCGGTTGGCTTGCAGGAATATGCCTTCACATTGGGCAGATCTCATTCAGCGACTCCAGTTGCTTGGAGAAAATTCTTCAGTATTAAGAAACTCAAAATCTCTGAACTCAGAGATTTTTCTGCAGTTCACTTCTGATACTTGGACAATCTTCTCTCAAGAATGCAAACAAAATTCACTGCAGAAATTCCATCCAATTAGGGCTTTCGGATCTCCAGCAGCTTCTGCTAGTTTGTGTCAAAGAACTCGGTATTCTGCACTTTGGCTTCCACTTGATCTAGTTCTAGAAGATGCAATGGATGGATATCAAGTAGAAGCGACAAGTGCTATTGAAAAAATAACCAGTTTGGTCAAAACCCTTAAGGCAATAAATGGAACCAGTTGGCATGATACCTTCTTGGATCTCTGGATAGCAGCTCTTCGTCTTGTTCAAAGGGAAAGGGATCCCATTGAGGGGCCTGTGCCTCGCATAGATACTCGTCTATGCCTTCTATTGTGTATCACAGTCCTTGTGATTGCTGATCTGATTGAAGAGGAAGAAAGTACAACAGTTGATGAAACGGAGTATGGTGCCTCCAATCACTGGAAAGAAAAGAAGGCTCCTGGAAAGTGTCGCAATGAATTAATTTCTAGCCTACAGATATTGGGGGAATATCAGAGCTTGCTGACTCCTCCTCAGGGTGTTATCTCTGCATGCAATCAGGCGGCTGCCAAAGCAATGATGTTTGTATCTGGAATCAATGTTAGTAATGCATATTTTGAATGCATGAATATGAAAGACATGCCAATGAACTCTTCAGCTGGAAACATGCGTCATTTGATTGTTGAGGCTTGTATTGCTAGAAATCTCCTGGATACATCTGCATATTTCTGGCGAGGCTATGTGAACGGATGCATTAACCAAATGCCTCAAAGTATACCACCTCAACCACCTGGTTGGTCAGCTTTCATGAAGGGGGCTCCACTTAATCATATAATGATAAATGCCTTAACTTCAACTCCTGCTTCAAGAACTGGAGAAAATATTTGA

Coding sequence (CDS)

ATGGCGATATCTGTTCAAAACAGTCTGTGGGACAGTGTTATAGAGCTCACCAAGGTTGCTCAACGGAAGGGAGCTGATCCTCTGCTCTGGGCTATTCAGTTGTCTTCAAATTTGAACTCGGCGGGAGTGGCTTTGCCTTCAGTTGAGCTTGCTAACGTGCTGGTTTCGCACATTTGTTGGGATAATAATGAGCCTGTTTCATGGAAGTTCCTTGAGAAGGCGTTGATGTTGAATATCGTACCCCCAATTCTTGTTCTTGCCTTGCTCACAACCAGGGTCATTTCAAGAAGACAATTCCAGCCTGTAGCATATAGACTCTATCTGGAACTCCTTCGAAGACATGCTTTTAAACTTAAATCTCATATCCATGGCCTCAAATACAAAGAGGTCATGGCATCTGTTGATGCTGTTCTTCGTCTTTCTGAGACATTCAATTTGCCAGCAAATGATCCTGGGACCCTTGTGGTTGAGTTTATATTTTCAATTATCTGGCAGTTGCTCGAAGCAACACTTGTTGATGAAGGGTTACTGGAACTTATCGTGGAAGAGAAATCCAAATGGCCAACAAAACCTCAAGAAATGGAAATAGATGGTCACAATGGTTATGATGATAAATGGACTGAACAACGTGAGAGATTGCGGAATGTAAATGTTGAACTGGCAATTGAGATAATTGGGAAGTTTCTTCAAGATACGGTTACTTCAAGGATTCTTCGGTTGGCTTGCAGGAATATGCCTTCACATTGGGCAGATCTCATTCAGCGACTCCAGTTGCTTGGAGAAAATTCTTCAGTATTAAGAAACTCAAAATCTCTGAACTCAGAGATTTTTCTGCAGTTCACTTCTGATACTTGGACAATCTTCTCTCAAGAATGCAAACAAAATTCACTGCAGAAATTCCATCCAATTAGGGCTTTCGGATCTCCAGCAGCTTCTGCTAGTTTGTGTCAAAGAACTCGGTATTCTGCACTTTGGCTTCCACTTGATCTAGTTCTAGAAGATGCAATGGATGGATATCAAGTAGAAGCGACAAGTGCTATTGAAAAAATAACCAGTTTGGTCAAAACCCTTAAGGCAATAAATGGAACCAGTTGGCATGATACCTTCTTGGATCTCTGGATAGCAGCTCTTCGTCTTGTTCAAAGGGAAAGGGATCCCATTGAGGGGCCTGTGCCTCGCATAGATACTCGTCTATGCCTTCTATTGTGTATCACAGTCCTTGTGATTGCTGATCTGATTGAAGAGGAAGAAAGTACAACAGTTGATGAAACGGAGTATGGTGCCTCCAATCACTGGAAAGAAAAGAAGGCTCCTGGAAAGTGTCGCAATGAATTAATTTCTAGCCTACAGATATTGGGGGAATATCAGAGCTTGCTGACTCCTCCTCAGGGTGTTATCTCTGCATGCAATCAGGCGGCTGCCAAAGCAATGATGTTTGTATCTGGAATCAATGTTAGTAATGCATATTTTGAATGCATGAATATGAAAGACATGCCAATGAACTCTTCAGCTGGAAACATGCGTCATTTGATTGTTGAGGCTTGTATTGCTAGAAATCTCCTGGATACATCTGCATATTTCTGGCGAGGCTATGTGAACGGATGCATTAACCAAATGCCTCAAAGTATACCACCTCAACCACCTGGTTGGTCAGCTTTCATGAAGGGGGCTCCACTTAATCATATAATGATAAATGCCTTAACTTCAACTCCTGCTTCAAGAACTGGAGAAAATATTTGA

Protein sequence

MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICWDNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKSHIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELIVEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRLACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKFHPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAINGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTTVDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFVSGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMPQSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGENI

Homology

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BLAST of Lcy01g001890 vs. ExPASy Swiss-Prot
Match: Q9LUG9 (Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana OX=3702 GN=MED33A PE=1 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 1.7e-174
Identity = 321/577 (55.63%), Postives = 412/577 (71.40%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           M +  + ++WD VIELTK+AQ    DP LWA QLSSNL    V LPS ELA V+VS+ICW
Sbjct: 1   MVVPGRRTVWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           DNN P+ WKFLE+A+ L +V P++VLALL  RV+  R  Q  AYR+YLELL+R+ F +K 
Sbjct: 61  DNNVPIVWKFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKD 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HI G  Y++VM SV  +LRLSE F+L  + PG L+VEF+F ++ QLL+A L DEGLLEL 
Sbjct: 121 HISGPHYQKVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELS 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
            +  S+W  K Q+MEID    Y++K T   E+L+++N  +AIE+I +FL++TV +R+L L
Sbjct: 181 QDSSSQWLVKSQDMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
              N  S W + +Q++QLLGENSS L++SK LNS   LQ  S+    +S + K  S +K 
Sbjct: 241 VSSNRASKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKS 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           + I  FGS ++ A LC     S+LWLPLDLV EDAMDGYQV  TSAIE IT L KTLK I
Sbjct: 301 NAIVDFGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NG++WHDTFL LWIAALRLVQRERDPIEGP+PR+DTRLC+ LCI  LV+A+LIEE +  +
Sbjct: 361 NGSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYES 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           V E                K R++L++SLQ+LG++  LL PP+ V+SA N+AA KA++F+
Sbjct: 421 VME----------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFL 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SG NV  + F+ +NMKDMP+N S GNMRHLIVEACIARN+LD SAY W GYVNG INQ+P
Sbjct: 481 SGGNVGKSCFDVINMKDMPVNCS-GNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QS+P + P WS+F+KGAPLN  M+N L S PAS   E
Sbjct: 541 QSLPNEVPCWSSFVKGAPLNAAMVNTLVSVPASSLAE 559

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BLAST of Lcy01g001890 vs. ExPASy Swiss-Prot
Match: F4IN69 (Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana OX=3702 GN=MED33B PE=1 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 1.4e-126
Identity = 272/591 (46.02%), Postives = 348/591 (58.88%), Query Frame = 0


Query: 6   QNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICWDNNEP 65
           Q SLW+SV  L + AQ K  DPL WA+QL   L SAG++LPS +LA  LV+HI W+N+ P
Sbjct: 7   QPSLWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSP 66

Query: 66  VSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKSHIHGL 125
           +SWK LEKA+ +NIVPP+LVLALL+ RVI  R+  P AYRLY+ELL+RHAF     I   
Sbjct: 67  LSWKLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAP 126

Query: 126 KYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELIVEEKS 185
            Y + M S+D +L LSETF +   +PG++++ F+FSI+W+LL+A+L +EGLLEL   ++S
Sbjct: 127 GYHKTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRS 186

Query: 186 KWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRLACRNM 245
           KWP+ P +M++DG      K  E  + L   N E+AIE+I +FLQ+ VTSRIL LA +NM
Sbjct: 187 KWPSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM 246

Query: 246 PSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKFHPIRA 305
                          E+ ++ R                               +FH I +
Sbjct: 247 ---------------ESKTIPRG------------------------------EFHAIVS 306

Query: 306 FGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAINGTSW 365
            GS  A       T  SALWLP+DL  ED MDG Q  A SA+E +T LVK L+A N TSW
Sbjct: 307 SGSKLA------LTSDSALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSW 366

Query: 366 HDTFLDLWIAALRLVQR-------------------ERDPIEGPVPRIDTRLCLLLCITV 425
           HD FL LW+AALRLVQR                   ERDPIEGPVPR DT LC+LL +T 
Sbjct: 367 HDAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTP 426

Query: 426 LVIADLIEEEESTTVDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVI 485
           L +A++IEEEES  +D+T    SN WKEKK  GKCR  LI+SLQ LG+Y+SLLTPP+ V 
Sbjct: 427 LAVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQ 486

Query: 486 SACNQAAAKAMMFVSGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAY 545
           S  NQAAAKA+MF+SGI  SN  +E  +M +    S++G         C  R  L T   
Sbjct: 487 SVANQAAAKAIMFISGITNSNGSYENTSMSE----SASG--------CCKVRFSLFTLKM 522

Query: 546 FWRGYVNGCINQMPQSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           F    V G       S       WS  MKG+PL   + N+L +TPAS   E
Sbjct: 547 F---VVMGVYLLCNISC------WSLVMKGSPLTPSLTNSLITTPASSLAE 522

[Close]

BLAST of Lcy01g001890 vs. ExPASy TrEMBL
Match: A0A6J1H3P1 (mediator of RNA polymerase II transcription subunit 33A isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460123 PE=4 SV=1)

HSP 1 Score: 1068.5 bits (2762), Expect = 9.5e-309
Identity = 532/577 (92.20%), Postives = 553/577 (95.84%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MA++V NS WD V ELTKVAQ+KG DPL WAIQLSSNLNS+GV LPSVELANVLVSHICW
Sbjct: 1   MAVAVHNSFWDRVTELTKVAQQKGVDPLHWAIQLSSNLNSSGVVLPSVELANVLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS
Sbjct: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGLKYKEVMASVDAVLRLSETFNLPA+DPGTLVVE+IFSI+W+LL+ATLVDEGLL+LI
Sbjct: 121 HIHGLKYKEVMASVDAVLRLSETFNLPADDPGTLVVEYIFSIVWKLLDATLVDEGLLDLI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           VEEKSKWPT+PQEME+DGHNGYDDKWTEQRERL+NVNVEL IEIIGKFLQD VTSRIL L
Sbjct: 181 VEEKSKWPTEPQEMELDGHNGYDDKWTEQRERLQNVNVELTIEIIGKFLQDAVTSRILHL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMPSHWADLIQRLQL+GENSSVLR SKS NSEIFLQF  DTWTIFSQE KQNS +KF
Sbjct: 241 ACRNMPSHWADLIQRLQLIGENSSVLRKSKSFNSEIFLQF--DTWTIFSQEFKQNSQKKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPA+SASLC RTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI
Sbjct: 301 HPIRAFGSPASSASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT
Sbjct: 361 NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           +DETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMF+
Sbjct: 421 IDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFI 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+VSNAYFEC+NMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP
Sbjct: 481 SGISVSNAYFECINMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQ PGWSAF+KGAPLNHIMI  LTSTPAS   E
Sbjct: 541 QSIPPQAPGWSAFVKGAPLNHIMIKVLTSTPASSLAE 575

[Close]

BLAST of Lcy01g001890 vs. ExPASy TrEMBL
Match: A0A6J1C952 (mediator of RNA polymerase II transcription subunit 33A OS=Momordica charantia OX=3673 GN=LOC111009534 PE=4 SV=1)

HSP 1 Score: 1064.3 bits (2751), Expect = 1.8e-307
Identity = 531/577 (92.03%), Postives = 552/577 (95.67%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MAISVQNSLWDSV E TKVAQ+KG DPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW
Sbjct: 1   MAISVQNSLWDSVTEQTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           ++NEPVSWKFLEKAL+LNIVPPILVLALLTTRVISRRQFQP AYRLYLEL+RRHAFKLK 
Sbjct: 61  EHNEPVSWKFLEKALVLNIVPPILVLALLTTRVISRRQFQPAAYRLYLELIRRHAFKLKC 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGLKYKEVMASVDAVLRLSE FNLPANDPGTLVVEFIFSI+W LL+ATLVDEGLLELI
Sbjct: 121 HIHGLKYKEVMASVDAVLRLSEIFNLPANDPGTLVVEFIFSIVWHLLDATLVDEGLLELI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQ+ VTSRIL L
Sbjct: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQEAVTSRILHL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMPSHWADLIQRLQLLGENSSVLRNSK+LNSEIFL FTSD   +FSQECKQNS QKF
Sbjct: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKTLNSEIFLHFTSDNCMVFSQECKQNSQQKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSL+KTLKAI
Sbjct: 301 HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLIKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIAALRLVQRERDPIEGPVP IDTRLCLLLCITVLVIADLIEEEESTT
Sbjct: 361 NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPGIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           VDETEYGASNHWKEKKAPG CRNELISSLQ+LGEYQSLLTPPQ VISACNQAAAKAMMFV
Sbjct: 421 VDETEYGASNHWKEKKAPGMCRNELISSLQMLGEYQSLLTPPQAVISACNQAAAKAMMFV 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+VS+AYFE +NMKDMP +S+AGNMRHLIVEACI+RNLLDTSAYFWRGYV+GCINQ+P
Sbjct: 481 SGISVSSAYFESINMKDMPASSTAGNMRHLIVEACISRNLLDTSAYFWRGYVSGCINQIP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQPPGWS FMKGAPLNH+MINALTSTPAS   E
Sbjct: 541 QSIPPQPPGWSTFMKGAPLNHLMINALTSTPASSLAE 577

[Close]

BLAST of Lcy01g001890 vs. ExPASy TrEMBL
Match: A0A5A7SQH3 (Mediator of RNA polymerase II transcription subunit 33A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00840 PE=4 SV=1)

HSP 1 Score: 1063.9 bits (2750), Expect = 2.4e-307
Identity = 532/577 (92.20%), Postives = 553/577 (95.84%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MA+SVQN+LWD V ELTKVAQ+KG DPLLWAIQLSSNLNSAGV LPSVELAN+LVSHICW
Sbjct: 1   MAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           +NNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS
Sbjct: 61  ENNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGLKYKEVMASVDAVL LSETFNLPANDPGTLVVEFIFSI+WQLL+ATL DEGLLELI
Sbjct: 121 HIHGLKYKEVMASVDAVLCLSETFNLPANDPGTLVVEFIFSIVWQLLDATLADEGLLELI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           +EEKSKWP KPQEME+DGHNGYDDKWTEQRERLRNVN+EL IEIIGKFL+D+VTSRIL+L
Sbjct: 181 MEEKSKWPAKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLEDSVTSRILQL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMPSHWADLIQRLQLLGENSSVLRNSKSL+SEIFLQFTSDTWTIFSQE KQNS QKF
Sbjct: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLDSEIFLQFTSDTWTIFSQEFKQNSQQKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPAASASLC RT YSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI
Sbjct: 301 HPIRAFGSPAASASLCHRTHYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIA+LRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEES T
Sbjct: 361 NGTSWHDTFLGLWIASLRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESAT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           +DETEY AS+HWKEKK PGKCRNELISSLQILGEYQSLLTPPQ VISACNQAAAKAMMFV
Sbjct: 421 IDETEYVASHHWKEKKTPGKCRNELISSLQILGEYQSLLTPPQDVISACNQAAAKAMMFV 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+V+NAYFEC+NMKDMPMNSS GNMRHLIVEACIARNLLDTSAYFWRGYVNGCI+QMP
Sbjct: 481 SGISVNNAYFECINMKDMPMNSS-GNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQ PGWSAFMKGA LNHIMIN LTSTPAS   E
Sbjct: 541 QSIPPQAPGWSAFMKGALLNHIMINVLTSTPASSLAE 576

[Close]

BLAST of Lcy01g001890 vs. ExPASy TrEMBL
Match: A0A1S3C9B9 (LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 33A-like OS=Cucumis melo OX=3656 GN=LOC103497918 PE=4 SV=1)

HSP 1 Score: 1063.9 bits (2750), Expect = 2.4e-307
Identity = 532/577 (92.20%), Postives = 553/577 (95.84%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MA+SVQN+LWD V ELTKVAQ+KG DPLLWAIQLSSNLNSAGV LPSVELAN+LVSHICW
Sbjct: 1   MAVSVQNNLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVVLPSVELANLLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           +NNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS
Sbjct: 61  ENNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGLKYKEVMASVDAVL LSETFNLPANDPGTLVVEFIFSI+WQLL+ATL DEGLLELI
Sbjct: 121 HIHGLKYKEVMASVDAVLCLSETFNLPANDPGTLVVEFIFSIVWQLLDATLADEGLLELI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           +EEKSKWP KPQEME+DGHNGYDDKWTEQRERLRNVN+EL IEIIGKFL+D+VTSRIL+L
Sbjct: 181 MEEKSKWPAKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLEDSVTSRILQL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMPSHWADLIQRLQLLGENSSVLRNSKSL+SEIFLQFTSDTWTIFSQE KQNS QKF
Sbjct: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLDSEIFLQFTSDTWTIFSQEFKQNSQQKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPAASASLC RT YSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI
Sbjct: 301 HPIRAFGSPAASASLCHRTHYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIA+LRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEES T
Sbjct: 361 NGTSWHDTFLGLWIASLRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESAT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           +DETEY AS+HWKEKK PGKCRNELISSLQILGEYQSLLTPPQ VISACNQAAAKAMMFV
Sbjct: 421 IDETEYVASHHWKEKKTPGKCRNELISSLQILGEYQSLLTPPQDVISACNQAAAKAMMFV 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+V+NAYFEC+NMKDMPMNSS GNMRHLIVEACIARNLLDTSAYFWRGYVNGCI+QMP
Sbjct: 481 SGISVNNAYFECINMKDMPMNSS-GNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQ PGWSAFMKGA LNHIMIN LTSTPAS   E
Sbjct: 541 QSIPPQAPGWSAFMKGALLNHIMINVLTSTPASSLAE 576

[Close]

BLAST of Lcy01g001890 vs. ExPASy TrEMBL
Match: A0A6J1KVA0 (mediator of RNA polymerase II transcription subunit 33A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499010 PE=4 SV=1)

HSP 1 Score: 1062.8 bits (2747), Expect = 5.2e-307
Identity = 531/577 (92.03%), Postives = 551/577 (95.49%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MA++V NS WD V ELTKVAQ+KG DPL WAIQLSSNLNS+GV LPSVELANVLVSHICW
Sbjct: 1   MAVAVHNSFWDRVTELTKVAQQKGVDPLHWAIQLSSNLNSSGVVLPSVELANVLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           DNNEPVSWKFLEKALMLNIVPPILVLALL TRVISRRQFQPVAYRLYLELLRRHAFKLKS
Sbjct: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLATRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGLKYKEVMASVDAVLRLSETFNLPA+DPGTLVVE+IFSI+W+LL+ATL DEGLL+LI
Sbjct: 121 HIHGLKYKEVMASVDAVLRLSETFNLPADDPGTLVVEYIFSIVWKLLDATLTDEGLLDLI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           VEEKSKWPT+PQEME+DGHNGYDDKWTEQRERL+NVNVEL IEIIGKFLQD VTSRIL L
Sbjct: 181 VEEKSKWPTEPQEMELDGHNGYDDKWTEQRERLQNVNVELTIEIIGKFLQDAVTSRILHL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMPSHWADLIQRLQLLGENSSVLR SKSLNSEIFLQF  DTWTIFSQE K+NS +KF
Sbjct: 241 ACRNMPSHWADLIQRLQLLGENSSVLRKSKSLNSEIFLQF--DTWTIFSQEFKKNSQKKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI
Sbjct: 301 HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT
Sbjct: 361 NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           +DETE GASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMF+
Sbjct: 421 IDETECGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFI 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+VSNAYFEC+NMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP
Sbjct: 481 SGISVSNAYFECINMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQ PGWSAF+KGAPLNHIMI  LTSTPAS   E
Sbjct: 541 QSIPPQAPGWSAFVKGAPLNHIMIKVLTSTPASSLTE 575

[Close]

BLAST of Lcy01g001890 vs. NCBI nr
Match: XP_038876266.1 (mediator of RNA polymerase II transcription subunit 33A-like isoform X1 [Benincasa hispida])

HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 543/577 (94.11%), Postives = 559/577 (96.88%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MA+SVQNSLWD V ELTKVAQ+KG DPLLWAIQLSSNLNSAGVALPSVELAN+LVSHICW
Sbjct: 1   MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           DNN+PVSWKFLEKALMLNIVPPILVLALLTT+VISRRQFQPVAYRLYLELLRRHAFKLKS
Sbjct: 61  DNNDPVSWKFLEKALMLNIVPPILVLALLTTKVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGL+YKEVM SVD+VLRLSETFNLPANDPGTLVVEFIFSI+WQLL+ATLVDEGLLELI
Sbjct: 121 HIHGLRYKEVMTSVDSVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           VEEKSKWPTKPQEME+DGHNGYDDKWTEQRERLRNVN+EL IEIIGKFLQDTVTSRIL L
Sbjct: 181 VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMP HWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIF QE KQNS QKF
Sbjct: 241 ACRNMPLHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFYQEFKQNSQQKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI
Sbjct: 301 HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT
Sbjct: 361 NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           +DETEY ASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQ +ISACNQAAAKAMMFV
Sbjct: 421 IDETEYVASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQDIISACNQAAAKAMMFV 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+VSNAYFEC+NMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCI+QMP
Sbjct: 481 SGISVSNAYFECINMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQ PGWSAFMKGAPLNHIMINALTSTPAS   E
Sbjct: 541 QSIPPQAPGWSAFMKGAPLNHIMINALTSTPASSLAE 577

[Close]

BLAST of Lcy01g001890 vs. NCBI nr
Match: XP_038876267.1 (mediator of RNA polymerase II transcription subunit 33A-like isoform X2 [Benincasa hispida])

HSP 1 Score: 1083.9 bits (2802), Expect = 0.0e+00
Identity = 542/577 (93.93%), Postives = 558/577 (96.71%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MA+SVQNSLWD V ELTKVAQ+KG DPLLWAIQLSSNLNSAGVALPSVELAN+LVSHICW
Sbjct: 1   MAVSVQNSLWDRVTELTKVAQQKGVDPLLWAIQLSSNLNSAGVALPSVELANLLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           DNN+PVSWKFLEKALMLNIVPPILVLALLTT+VISRRQFQPVAYRLYLELLRRHAFKLKS
Sbjct: 61  DNNDPVSWKFLEKALMLNIVPPILVLALLTTKVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGL+YKEVM SVD+VLRLSETFNLPANDPGTLVVEFIFSI+WQLL+ATLVDEGLLELI
Sbjct: 121 HIHGLRYKEVMTSVDSVLRLSETFNLPANDPGTLVVEFIFSIVWQLLDATLVDEGLLELI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           VEEKSKWPTKPQEME+DGHNGYDDKWTEQRERLRNVN+EL IEIIGKFLQDTVTSRIL L
Sbjct: 181 VEEKSKWPTKPQEMELDGHNGYDDKWTEQRERLRNVNIELTIEIIGKFLQDTVTSRILHL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMP HWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIF QE KQNS QKF
Sbjct: 241 ACRNMPLHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFYQEFKQNSQQKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI
Sbjct: 301 HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT
Sbjct: 361 NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           +DETEY ASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQ +ISACNQAAAKAMMFV
Sbjct: 421 IDETEYVASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQDIISACNQAAAKAMMFV 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+VSNAYFEC+NMKDMPMNSS GNMRHLIVEACIARNLLDTSAYFWRGYVNGCI+QMP
Sbjct: 481 SGISVSNAYFECINMKDMPMNSS-GNMRHLIVEACIARNLLDTSAYFWRGYVNGCISQMP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQ PGWSAFMKGAPLNHIMINALTSTPAS   E
Sbjct: 541 QSIPPQAPGWSAFMKGAPLNHIMINALTSTPASSLAE 576

[Close]

BLAST of Lcy01g001890 vs. NCBI nr
Match: XP_023548172.1 (mediator of RNA polymerase II transcription subunit 33A-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1071.6 bits (2770), Expect = 2.2e-309
Identity = 534/577 (92.55%), Postives = 554/577 (96.01%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MA++V NS WD V ELTKVAQ+KG DPL WAIQLSSNLNS+GV LPSVELANVLVSHICW
Sbjct: 1   MAVAVHNSFWDRVTELTKVAQQKGVDPLHWAIQLSSNLNSSGVVLPSVELANVLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS
Sbjct: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGLKYKE+MASVDAVLRLSETFNLPA+DPGTLVVE+IFSI+W+LL+ATLVDEGLL+LI
Sbjct: 121 HIHGLKYKEIMASVDAVLRLSETFNLPADDPGTLVVEYIFSIVWKLLDATLVDEGLLDLI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           VEEKSKWPT+PQEME+DGHNGYDDKWTEQRERL+NVNVEL IEIIGKFLQD VTSRIL L
Sbjct: 181 VEEKSKWPTEPQEMELDGHNGYDDKWTEQRERLQNVNVELTIEIIGKFLQDAVTSRILHL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMPSHWADLIQRLQLLGENSSVLR SKSLNSEIFLQF  DTWTIFSQE KQNS +KF
Sbjct: 241 ACRNMPSHWADLIQRLQLLGENSSVLRKSKSLNSEIFLQF--DTWTIFSQEFKQNSQKKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI
Sbjct: 301 HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT
Sbjct: 361 NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           +DETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMF+
Sbjct: 421 IDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFI 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+VSNAYFEC+NMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP
Sbjct: 481 SGISVSNAYFECINMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQ PGWSAF+KGAPLNHIMI  LTSTPAS   E
Sbjct: 541 QSIPPQAPGWSAFVKGAPLNHIMIKVLTSTPASSLAE 575

[Close]

BLAST of Lcy01g001890 vs. NCBI nr
Match: XP_022959001.1 (mediator of RNA polymerase II transcription subunit 33A isoform X1 [Cucurbita moschata])

HSP 1 Score: 1068.5 bits (2762), Expect = 2.0e-308
Identity = 532/577 (92.20%), Postives = 553/577 (95.84%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MA++V NS WD V ELTKVAQ+KG DPL WAIQLSSNLNS+GV LPSVELANVLVSHICW
Sbjct: 1   MAVAVHNSFWDRVTELTKVAQQKGVDPLHWAIQLSSNLNSSGVVLPSVELANVLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS
Sbjct: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGLKYKEVMASVDAVLRLSETFNLPA+DPGTLVVE+IFSI+W+LL+ATLVDEGLL+LI
Sbjct: 121 HIHGLKYKEVMASVDAVLRLSETFNLPADDPGTLVVEYIFSIVWKLLDATLVDEGLLDLI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           VEEKSKWPT+PQEME+DGHNGYDDKWTEQRERL+NVNVEL IEIIGKFLQD VTSRIL L
Sbjct: 181 VEEKSKWPTEPQEMELDGHNGYDDKWTEQRERLQNVNVELTIEIIGKFLQDAVTSRILHL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMPSHWADLIQRLQL+GENSSVLR SKS NSEIFLQF  DTWTIFSQE KQNS +KF
Sbjct: 241 ACRNMPSHWADLIQRLQLIGENSSVLRKSKSFNSEIFLQF--DTWTIFSQEFKQNSQKKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPA+SASLC RTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI
Sbjct: 301 HPIRAFGSPASSASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT
Sbjct: 361 NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           +DETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMF+
Sbjct: 421 IDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFI 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+VSNAYFEC+NMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP
Sbjct: 481 SGISVSNAYFECINMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQ PGWSAF+KGAPLNHIMI  LTSTPAS   E
Sbjct: 541 QSIPPQAPGWSAFVKGAPLNHIMIKVLTSTPASSLAE 575

[Close]

BLAST of Lcy01g001890 vs. NCBI nr
Match: XP_023548173.1 (mediator of RNA polymerase II transcription subunit 33A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1065.4 bits (2754), Expect = 1.7e-307
Identity = 533/577 (92.37%), Postives = 553/577 (95.84%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           MA++V NS WD V ELTKVAQ+KG DPL WAIQLSSNLNS+GV LPSVELANVLVSHICW
Sbjct: 1   MAVAVHNSFWDRVTELTKVAQQKGVDPLHWAIQLSSNLNSSGVVLPSVELANVLVSHICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS
Sbjct: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HIHGLKYKE+MASVDAVLRLSETFNLPA+DPGTLVVE+IFSI+W+LL+ATLVDEGLL+LI
Sbjct: 121 HIHGLKYKEIMASVDAVLRLSETFNLPADDPGTLVVEYIFSIVWKLLDATLVDEGLLDLI 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
           VEEKSKWPT+PQEME+DGHNGYDDKWTEQRERL+NVNVEL IEIIGKFLQD VTSRIL L
Sbjct: 181 VEEKSKWPTEPQEMELDGHNGYDDKWTEQRERLQNVNVELTIEIIGKFLQDAVTSRILHL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
           ACRNMPSHWADLIQRLQLLGENSSVLR SKSLNSEIFLQF  DTWTIFSQE KQNS +KF
Sbjct: 241 ACRNMPSHWADLIQRLQLLGENSSVLRKSKSLNSEIFLQF--DTWTIFSQEFKQNSQKKF 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           HPIRAFGSPAASASLC RTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI
Sbjct: 301 HPIRAFGSPAASASLCHRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NGTSWHDTFL LWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT
Sbjct: 361 NGTSWHDTFLGLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           +DETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMF+
Sbjct: 421 IDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFI 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SGI+VSNAYFEC+NMKDMPMNSS GNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP
Sbjct: 481 SGISVSNAYFECINMKDMPMNSS-GNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QSIPPQ PGWSAF+KGAPLNHIMI  LTSTPAS   E
Sbjct: 541 QSIPPQAPGWSAFVKGAPLNHIMIKVLTSTPASSLAE 574

[Close]

BLAST of Lcy01g001890 vs. TAIR 10
Match: AT3G23590.1 (REF4-related 1 )

HSP 1 Score: 614.0 bits (1582), Expect = 1.2e-175
Identity = 321/577 (55.63%), Postives = 412/577 (71.40%), Query Frame = 0


Query: 1   MAISVQNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICW 60
           M +  + ++WD VIELTK+AQ    DP LWA QLSSNL    V LPS ELA V+VS+ICW
Sbjct: 1   MVVPGRRTVWDCVIELTKMAQENCVDPRLWASQLSSNLKFFAVELPSTELAEVIVSYICW 60

Query: 61  DNNEPVSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKS 120
           DNN P+ WKFLE+A+ L +V P++VLALL  RV+  R  Q  AYR+YLELL+R+ F +K 
Sbjct: 61  DNNVPIVWKFLERAMALKLVSPLVVLALLADRVVPTRSTQQAAYRIYLELLKRNMFTIKD 120

Query: 121 HIHGLKYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELI 180
           HI G  Y++VM SV  +LRLSE F+L  + PG L+VEF+F ++ QLL+A L DEGLLEL 
Sbjct: 121 HISGPHYQKVMISVSNILRLSELFDLDTSKPGVLLVEFVFKMVSQLLDAALSDEGLLELS 180

Query: 181 VEEKSKWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRL 240
            +  S+W  K Q+MEID    Y++K T   E+L+++N  +AIE+I +FL++TV +R+L L
Sbjct: 181 QDSSSQWLVKSQDMEIDAPERYNEK-TGSLEKLQSLNTIMAIELIAEFLRNTVIARLLYL 240

Query: 241 ACRNMPSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKF 300
              N  S W + +Q++QLLGENSS L++SK LNS   LQ  S+    +S + K  S +K 
Sbjct: 241 VSSNRASKWHEFVQKVQLLGENSSALKHSKVLNSGDLLQLISNRRFGYSYDSKVTSARKS 300

Query: 301 HPIRAFGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAI 360
           + I  FGS ++ A LC     S+LWLPLDLV EDAMDGYQV  TSAIE IT L KTLK I
Sbjct: 301 NAIVDFGSLSSYAGLCHGASLSSLWLPLDLVFEDAMDGYQVNPTSAIEIITGLAKTLKEI 360

Query: 361 NGTSWHDTFLDLWIAALRLVQRERDPIEGPVPRIDTRLCLLLCITVLVIADLIEEEESTT 420
           NG++WHDTFL LWIAALRLVQRERDPIEGP+PR+DTRLC+ LCI  LV+A+LIEE +  +
Sbjct: 361 NGSTWHDTFLGLWIAALRLVQRERDPIEGPIPRLDTRLCMSLCIVPLVVANLIEEGKYES 420

Query: 421 VDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVISACNQAAAKAMMFV 480
           V E                K R++L++SLQ+LG++  LL PP+ V+SA N+AA KA++F+
Sbjct: 421 VME----------------KLRDDLVTSLQVLGDFPGLLAPPKCVVSAANKAATKAILFL 480

Query: 481 SGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAYFWRGYVNGCINQMP 540
           SG NV  + F+ +NMKDMP+N S GNMRHLIVEACIARN+LD SAY W GYVNG INQ+P
Sbjct: 481 SGGNVGKSCFDVINMKDMPVNCS-GNMRHLIVEACIARNILDMSAYSWPGYVNGRINQIP 540

Query: 541 QSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           QS+P + P WS+F+KGAPLN  M+N L S PAS   E
Sbjct: 541 QSLPNEVPCWSSFVKGAPLNAAMVNTLVSVPASSLAE 559

[Close]

BLAST of Lcy01g001890 vs. TAIR 10
Match: AT2G48110.1 (reduced epidermal fluorescence 4 )

HSP 1 Score: 454.9 bits (1169), Expect = 9.6e-128
Identity = 272/591 (46.02%), Postives = 348/591 (58.88%), Query Frame = 0


Query: 6   QNSLWDSVIELTKVAQRKGADPLLWAIQLSSNLNSAGVALPSVELANVLVSHICWDNNEP 65
           Q SLW+SV  L + AQ K  DPL WA+QL   L SAG++LPS +LA  LV+HI W+N+ P
Sbjct: 7   QPSLWESVTSLIRSAQEKNVDPLHWALQLRLTLASAGISLPSPDLAQFLVTHIFWENHSP 66

Query: 66  VSWKFLEKALMLNIVPPILVLALLTTRVISRRQFQPVAYRLYLELLRRHAFKLKSHIHGL 125
           +SWK LEKA+ +NIVPP+LVLALL+ RVI  R+  P AYRLY+ELL+RHAF     I   
Sbjct: 67  LSWKLLEKAISVNIVPPLLVLALLSPRVIPNRKLHPAAYRLYMELLKRHAFSFMPLIRAP 126

Query: 126 KYKEVMASVDAVLRLSETFNLPANDPGTLVVEFIFSIIWQLLEATLVDEGLLELIVEEKS 185
            Y + M S+D +L LSETF +   +PG++++ F+FSI+W+LL+A+L +EGLLEL   ++S
Sbjct: 127 GYHKTMNSIDDILHLSETFGVQDQEPGSILLAFVFSIVWELLDASLDEEGLLELTSNKRS 186

Query: 186 KWPTKPQEMEIDGHNGYDDKWTEQRERLRNVNVELAIEIIGKFLQDTVTSRILRLACRNM 245
           KWP+ P +M++DG      K  E  + L   N E+AIE+I +FLQ+ VTSRIL LA +NM
Sbjct: 187 KWPSSPHDMDLDGLEN-SVKRNENHDALEKANTEMAIELIQEFLQNKVTSRILHLASQNM 246

Query: 246 PSHWADLIQRLQLLGENSSVLRNSKSLNSEIFLQFTSDTWTIFSQECKQNSLQKFHPIRA 305
                          E+ ++ R                               +FH I +
Sbjct: 247 ---------------ESKTIPRG------------------------------EFHAIVS 306

Query: 306 FGSPAASASLCQRTRYSALWLPLDLVLEDAMDGYQVEATSAIEKITSLVKTLKAINGTSW 365
            GS  A       T  SALWLP+DL  ED MDG Q  A SA+E +T LVK L+A N TSW
Sbjct: 307 SGSKLA------LTSDSALWLPIDLFFEDIMDGTQAAAASAVENLTGLVKALQAANSTSW 366

Query: 366 HDTFLDLWIAALRLVQR-------------------ERDPIEGPVPRIDTRLCLLLCITV 425
           HD FL LW+AALRLVQR                   ERDPIEGPVPR DT LC+LL +T 
Sbjct: 367 HDAFLALWLAALRLVQRENLCLRYCFFMHMLEILSEERDPIEGPVPRTDTFLCVLLSVTP 426

Query: 426 LVIADLIEEEESTTVDETEYGASNHWKEKKAPGKCRNELISSLQILGEYQSLLTPPQGVI 485
           L +A++IEEEES  +D+T    SN WKEKK  GKCR  LI+SLQ LG+Y+SLLTPP+ V 
Sbjct: 427 LAVANIIEEEESQWIDQTSSSPSNQWKEKK--GKCRQGLINSLQQLGDYESLLTPPRSVQ 486

Query: 486 SACNQAAAKAMMFVSGINVSNAYFECMNMKDMPMNSSAGNMRHLIVEACIARNLLDTSAY 545
           S  NQAAAKA+MF+SGI  SN  +E  +M +    S++G         C  R  L T   
Sbjct: 487 SVANQAAAKAIMFISGITNSNGSYENTSMSE----SASG--------CCKVRFSLFTLKM 522

Query: 546 FWRGYVNGCINQMPQSIPPQPPGWSAFMKGAPLNHIMINALTSTPASRTGE 578
           F    V G       S       WS  MKG+PL   + N+L +TPAS   E
Sbjct: 547 F---VVMGVYLLCNISC------WSLVMKGSPLTPSLTNSLITTPASSLAE 522

The following BLAST results are available for this feature:

BLAST of Lcy01g001890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUG9	1.7e-174	55.63	Mediator of RNA polymerase II transcription subunit 33A OS=Arabidopsis thaliana ...	[more]
F4IN69	1.4e-126	46.02	Mediator of RNA polymerase II transcription subunit 33B OS=Arabidopsis thaliana ...	[more]

BLAST of Lcy01g001890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3P1	9.5e-309	92.20	mediator of RNA polymerase II transcription subunit 33A isoform X1 OS=Cucurbita ...	[more]
A0A6J1C952	1.8e-307	92.03	mediator of RNA polymerase II transcription subunit 33A OS=Momordica charantia O...	[more]
A0A5A7SQH3	2.4e-307	92.20	Mediator of RNA polymerase II transcription subunit 33A-like OS=Cucumis melo var...	[more]
A0A1S3C9B9	2.4e-307	92.20	LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 33A-lik...	[more]
A0A6J1KVA0	5.2e-307	92.03	mediator of RNA polymerase II transcription subunit 33A isoform X1 OS=Cucurbita ...	[more]

BLAST of Lcy01g001890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876266.1	0.0e+00	94.11	mediator of RNA polymerase II transcription subunit 33A-like isoform X1 [Beninca...	[more]
XP_038876267.1	0.0e+00	93.93	mediator of RNA polymerase II transcription subunit 33A-like isoform X2 [Beninca...	[more]
XP_023548172.1	2.2e-309	92.55	mediator of RNA polymerase II transcription subunit 33A-like isoform X1 [Cucurbi...	[more]
XP_022959001.1	2.0e-308	92.20	mediator of RNA polymerase II transcription subunit 33A isoform X1 [Cucurbita mo...	[more]
XP_023548173.1	1.7e-307	92.37	mediator of RNA polymerase II transcription subunit 33A-like isoform X2 [Cucurbi...	[more]

BLAST of Lcy01g001890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23590.1	1.2e-175	55.63	REF4-related 1	[more]
AT2G48110.1	9.6e-128	46.02	reduced epidermal fluorescence 4	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039638	Mediator of RNA polymerase II transcription subunit 33A/B	PANTHER	PTHR33739	OS07G0681500 PROTEIN	coord: 8..574
None	No IPR available	PANTHER	PTHR33739:SF5	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 33A	coord: 8..574

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g001890.1	Lcy01g001890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:2000762	regulation of phenylpropanoid metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016592	mediator complex