Lcy01g001340 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g001340
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Dynein beta chain, ciliary protein
Location	Chr01: 1571069 .. 1574138 (-)
RNA-Seq Expression	Lcy01g001340
Synteny	Lcy01g001340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAGAATAATCAGATCGGCCACGTTCTCTTCAAAGCGGCTCGAGTTTCGTACTCAGTAAAACCGAGTCGCGACTCACCGATTCGTCATTTCTTCTCCATTTTCCCCTGAAAATTTGTCGTAAAACCCTCCCACTCGTAGGGTTCTTGATTCTTCGCGCTCGTTCTGTGACGAATTTCGTATGAATCTGAATCTCCGATTCCAGTTCGTTTCGTGAGATCGTTGTTCGTTTAGGAAGAAGGATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAGCCGGCTTCGAGCATCGATTCCACTGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAAGCCTCCGCTGCGTGTGGTCGAGAAGGCTCGGGAGAGCGGCGCTCTTGATTCTGGTAATTGTAATTTGTTAATCGTTTGCGGTGTTTCTTTGATTTCTCTGATTTATTATCGAGTCCTCTTTTTGGCACTTTGAGAATCGAGGCTGAAGGTTCTCGAAGAAGGATTATGTTTCTCTGTTGAATTAAATGCAGTTTCGTAGAATTCCTATGAGTTGTAAATCATCGGAATCTCTCAATCGTTTTGGTTGTTTTTCATTTCATGCTGTTATTGATTGTCTTCGTCAAATAATGTAGCGGCATTTCTCCACTAGGATTTGGATTTAAGCTCATTTACTACTCACTGATCTGATCTTCACTGAAGAACTGTTCTCGTTATTGTTTATCGGCTTCTTTTCTCTGTTTTTCCTCTTTCGTTTTTGTTTGTTGGCTTCTGTCTCTCTGAACAGAAATATCTTCTCCTTACTGTTCATTATTGTCTCTCTTTCCTCGGTGTTTGATTTTGTAGGACTATGGACGAGGTTACAGTTTAATGTGAACATTGCTTCTAATTTTACAGTTTTATGTGATTTTTTTGGTCCTGAACTTTGAGTTCACTTGCTTCTGAGATTTCGACTTTCTTTCTCTTATTATACTATTCCGCTTGGTTGTATTTATTGAGACAAAAGTTGAGAAGTTCTTTGTTGTCTGCTTCTATTGCGTACTTTTTCATTAGCTTCCGTTGATTTAGGCTTCCAATGTCTAAGCATGTAAAGAAAGCATAGAGGCCAAGGAAAATGTTCTAGATGCTGGGGATTGATGGATGATTTTCATTTTTTTTGCTCTGAAGCATAATAGCATTCCAGGTGGAGTTTCTCTTTGTTTGATTCTCTTTCTCCGTTGGACCAAATGCAGTTCCATAGAATCCCTATTATATATAATCAGATTTTGATGACGAGCTTTATTTTTTTGGGGGCGGTTGATCTGGAAGGACAATAAACATCGAATCACTGCAGAAACTGCCTATAAAATTAGAAACTGAACTATATCGATAGTGCATGTAAACAGTAAAGCATTGTCCAACAATCACATGGAAACTTATAGTCACTCCAAAGTCTGATGGTTTTTTTACTGACGGGAATTGATTCATCGGATGTTATATAATTTTTTTTTTAATTGAAACAAATCGGATGTTATATAATTGAATGCTAACAATTTCCAATTGTTTCTTCCGGTGGTGTCTCAGGAAGTAATTCGGGAAATGTGCTTGAAGAACGAGATACGCAGTTCGATGCCATGCTTAGCCAAATGGTGGGTCGAATTAAATCAAAGCCAGGAGGAAAACTTGAGATGGGGGAGGTAAGTTTCCTAAGAAGAAACCAAATTACTCTTAGAATACAGAGACATTGCATATAATTTTGGACTTCTTCAAACTGTAGAGCATGATCCGACGCTCTTCCTTTATTAATTTTTCCATTAATAATCCTTGATGTCTGACCAATCCTACGAGTCAACTGGTGTGGTCCTACTGAAAAATTCATATGTAAATTGTAAGTAAATTTGTCCAAATTGTTCAATCATTTGATAACTAGTCAATCTTTGACAAATGAGCAGACACTAATTTAAATTCGTGATTTTGAAAGCATATAAGCTAAAAGCCTGTCTCTTTAATTGTTAGAAGAAAAAGAAATCCAAGCTGCACTAAAATGAAAAAGAAATTAAATAAATAAATTTGCCTCTCAGAAAGGAAGTATGTTTTTTGTTTGTTTGTTTTGTCTTGTTGGTCCTTTCTTCTTATTAGTGAGAAGGCAAGTCTGGTTCTTTTATTTGGAAGAGATTTTTGCAATCCTCCTTGGTCAAAGCAATTTAGGCAAATGGATCATTTTTCTTTTGGCTTTCTGACTGTTTTTCCTTTTCTTTAATGGAAAGTCTGTCCCCTATATCTGTGTGTACATATATATTTATATATAATTCCTGTTCATTTGGTCATTTGTCATTTGCGAAGATAAGAGTAATATGATTATGATTGTGCTTGGTGAATGTACTCTGTTTGAATTATCAGTTTGTTCATTGGAGGTGGCCATCATAGATTGAATCCATTACTTCTAAGTCCTTTATTTTTTCCATGACCCTTATTGACCCCTAGACCAATCCATGATGGTTATAATAGTTTTCATCTTTGCTAAGGATACATTTGAATTCTTAGTCAAATTCCAAAAACAAAAACTAGTTTTTGAAAACTATTTTTTTTTAGTTTTCAAAACTTGACTTGGTTTTTTGAAACATGAGAAGAAGGTAGATAACACACCAAAGAAATAAACTTAAATTTCAAATAAAAAAAAAACTATACACAACAAACCGAATGATTATTAGAGGGGCTTTAATAAATTACAATATTTTTTAGTCTAATTTTCGTGATACTGATAATGTTACAGGCCTCTGTGGTGGAGAGGTATGACAGACCAATGCCAAAGCTACGAAATACAGATGTAAAATCCAGTAAATACGAGGATCGGCCAGCTCCACCAGGCACTTTAAACGTAGCACAGATGCGCCATGTAATTCTACTGCATGAAGGAAAGGCTGATGATCATGATGGGCCAATGGGCGTTCACCAAATTGCTGAAAGGTATAATGTCAGTGTTGCTCAAATACAGACGATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGAGAAAAAGAAGGATCCTTAATAACAGGTTATTATTATTATTATTATTATTA

mRNA sequence

GGAGAATAATCAGATCGGCCACGTTCTCTTCAAAGCGGCTCGAGTTTCGTACTCAGTAAAACCGAGTCGCGACTCACCGATTCGTCATTTCTTCTCCATTTTCCCCTGAAAATTTGTCGTAAAACCCTCCCACTCGTAGGGTTCTTGATTCTTCGCGCTCGTTCTGTGACGAATTTCGTATGAATCTGAATCTCCGATTCCAGTTCGTTTCGTGAGATCGTTGTTCGTTTAGGAAGAAGGATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAGCCGGCTTCGAGCATCGATTCCACTGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAAGCCTCCGCTGCGTGTGGTCGAGAAGGCTCGGGAGAGCGGCGCTCTTGATTCTGGAAGTAATTCGGGAAATGTGCTTGAAGAACGAGATACGCAGTTCGATGCCATGCTTAGCCAAATGGTGGGTCGAATTAAATCAAAGCCAGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGGTATGACAGACCAATGCCAAAGCTACGAAATACAGATGTAAAATCCAGTAAATACGAGGATCGGCCAGCTCCACCAGGCACTTTAAACGTAGCACAGATGCGCCATGTAATTCTACTGCATGAAGGAAAGGCTGATGATCATGATGGGCCAATGGGCGTTCACCAAATTGCTGAAAGGTATAATGTCAGTGTTGCTCAAATACAGACGATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGAGAAAAAGAAGGATCCTTAATAACAGGTTATTATTATTATTATTATTATTA

Coding sequence (CDS)

ATGGGACAGGCATTTCGTCGAGCGGCTGGAAGAATCAAGCCGGCTTCGAGCATCGATTCCACTGCCTCTTCGTTGAAAATGGAGAGCGTCGTCGATCGGAAGCCTCCGCTGCGTGTGGTCGAGAAGGCTCGGGAGAGCGGCGCTCTTGATTCTGGAAGTAATTCGGGAAATGTGCTTGAAGAACGAGATACGCAGTTCGATGCCATGCTTAGCCAAATGGTGGGTCGAATTAAATCAAAGCCAGGAGGAAAACTTGAGATGGGGGAGGCCTCTGTGGTGGAGAGGTATGACAGACCAATGCCAAAGCTACGAAATACAGATGTAAAATCCAGTAAATACGAGGATCGGCCAGCTCCACCAGGCACTTTAAACGTAGCACAGATGCGCCATGTAATTCTACTGCATGAAGGAAAGGCTGATGATCATGATGGGCCAATGGGCGTTCACCAAATTGCTGAAAGGTATAATGTCAGTGTTGCTCAAATACAGACGATTTTGCAGTTTCTGTCTCTGCCTCCAGAGGACAGTCTTAGAGAGAAAAAGAAGGATCCTTAA

Protein sequence

MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSGSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDSLREKKKDP

Homology

[Close]

BLAST of Lcy01g001340 vs. ExPASy TrEMBL
Match: A0A6J1L288 (uncharacterized protein LOC111499180 OS=Cucurbita maxima OX=3661 GN=LOC111499180 PE=4 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 3.2e-85
Identity = 166/186 (89.25%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSG 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESG+LDS    GSNSG
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGSLDSGDVLGSNSG 60

Query: 61  NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYEDR 120
           NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY+RPMPKLRNTD+KSSKYEDR
Sbjct: 61  NVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYNRPMPKLRNTDLKSSKYEDR 120

Query: 121 PAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDS 180
           PAPPGTLNVAQMRH+ILLHEGKADDHDGPMGV+QIAERYNV V+QI+TILQFLSLPPEDS
Sbjct: 121 PAPPGTLNVAQMRHIILLHEGKADDHDGPMGVNQIAERYNVGVSQIRTILQFLSLPPEDS 180

Query: 181 LREKKK 183
           LR+KKK
Sbjct: 181 LRDKKK 186

[Close]

BLAST of Lcy01g001340 vs. ExPASy TrEMBL
Match: A0A6J1H4J6 (uncharacterized protein LOC111459975 OS=Cucurbita moschata OX=3662 GN=LOC111459975 PE=4 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 2.1e-84
Identity = 165/186 (88.71%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSG 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESGALDS    GSNS 
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSE 60

Query: 61  NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYEDR 120
           NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERYDRPMP+LRNTD+KSSKYEDR
Sbjct: 61  NVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSSKYEDR 120

Query: 121 PAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDS 180
           PAPPGTLNVAQMRH++LLHEGKA+DHDGPMGV+QIAERYNV VAQI+TILQFLSLPPEDS
Sbjct: 121 PAPPGTLNVAQMRHIMLLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDS 180

Query: 181 LREKKK 183
           LR+KKK
Sbjct: 181 LRDKKK 186

[Close]

BLAST of Lcy01g001340 vs. ExPASy TrEMBL
Match: A0A0A0KCC5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G196710 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.4e-83
Identity = 167/188 (88.83%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNS 60
           MGQAFRRAAGRIKPASSIDS TASSLKMES+VDRKPP RV EKARESGALDSG    S+S
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60

Query: 61  GNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYED 120
           GN+LEERD QFDAMLSQMVGRIKSKPGGKLEMGEASVVERY RPMPKLR+T++ SSKYED
Sbjct: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120

Query: 121 RPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMR +ILLHEGKADDHDGPMG+HQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLREKKKD 184
           SLR+K KD
Sbjct: 181 SLRDKIKD 188

[Close]

BLAST of Lcy01g001340 vs. ExPASy TrEMBL
Match: A0A1S3C957 (uncharacterized protein LOC103497865 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497865 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.4e-82
Identity = 165/188 (87.77%), Postives = 174/188 (92.55%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNS 60
           MGQAFRRAAGRIKPASS+DS TASSLKMES+VDRKPP RV EKARESG+LDSG    S+S
Sbjct: 1   MGQAFRRAAGRIKPASSVDSTTASSLKMESIVDRKPPPRVAEKARESGSLDSGDVTASDS 60

Query: 61  GNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYED 120
           GN LEERD QFDAMLSQMVGRIKSKPGGKLEMGEASVVERY RPMPKLR+T++KSSKYED
Sbjct: 61  GNRLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNIKSSKYED 120

Query: 121 RPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMR +ILLHEGKADDHDGPMG HQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGPHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLREKKKD 184
           SLR+K  D
Sbjct: 181 SLRDKITD 188

[Close]

BLAST of Lcy01g001340 vs. ExPASy TrEMBL
Match: A0A6J1C9H1 (uncharacterized protein LOC111009550 OS=Momordica charantia OX=3673 GN=LOC111009550 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 7.7e-79
Identity = 160/193 (82.90%), Postives = 170/193 (88.08%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKA-----RESGALDS---- 60
           MGQAFRRAAGRIKPASSIDSTASSLKMESVVDR+PP R ++KA     RESGALDS    
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRRPPPRAIQKAEVPQPRESGALDSGGIL 60

Query: 61  GSNSGNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSS 120
           GSNS NV EERD QFDAML QMVGRIKSKPGGKLEMGEA+VVERY+RPMPKLRNTDVKSS
Sbjct: 61  GSNSENVPEERDPQFDAMLGQMVGRIKSKPGGKLEMGEAAVVERYERPMPKLRNTDVKSS 120

Query: 121 KYEDRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSL 180
           +YEDRPAPPGTLNVAQMRHVI LHEGKA+DH+G M V QIA+RYNVSV QI TILQFLSL
Sbjct: 121 RYEDRPAPPGTLNVAQMRHVIQLHEGKAEDHNGTMAVQQIAQRYNVSVTQIHTILQFLSL 180

Query: 181 PPEDSLREKKKDP 185
           PPED+LR K KDP
Sbjct: 181 PPEDTLRAKNKDP 193

[Close]

BLAST of Lcy01g001340 vs. NCBI nr
Match: XP_023006464.1 (uncharacterized protein LOC111499180 [Cucurbita maxima])

HSP 1 Score: 324.3 bits (830), Expect = 6.7e-85
Identity = 166/186 (89.25%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSG 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESG+LDS    GSNSG
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGSLDSGDVLGSNSG 60

Query: 61  NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYEDR 120
           NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERY+RPMPKLRNTD+KSSKYEDR
Sbjct: 61  NVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYNRPMPKLRNTDLKSSKYEDR 120

Query: 121 PAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDS 180
           PAPPGTLNVAQMRH+ILLHEGKADDHDGPMGV+QIAERYNV V+QI+TILQFLSLPPEDS
Sbjct: 121 PAPPGTLNVAQMRHIILLHEGKADDHDGPMGVNQIAERYNVGVSQIRTILQFLSLPPEDS 180

Query: 181 LREKKK 183
           LR+KKK
Sbjct: 181 LRDKKK 186

[Close]

BLAST of Lcy01g001340 vs. NCBI nr
Match: XP_023547640.1 (uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 324.3 bits (830), Expect = 6.7e-85
Identity = 167/186 (89.78%), Postives = 176/186 (94.62%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSG 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R VEKARESGALDS    GSNS 
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAVEKARESGALDSGDDLGSNSE 60

Query: 61  NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYEDR 120
           NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERYDRPMP+LRNTD+KSSKYEDR
Sbjct: 61  NVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSSKYEDR 120

Query: 121 PAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDS 180
           PAPPGTLNVAQMRH+ILLHEGKA+DHDGPMGV+QIAERYNV VAQI+TILQFLSLPPEDS
Sbjct: 121 PAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDS 180

Query: 181 LREKKK 183
           LR+KKK
Sbjct: 181 LRDKKK 186

[Close]

BLAST of Lcy01g001340 vs. NCBI nr
Match: XP_022958820.1 (uncharacterized protein LOC111459975 [Cucurbita moschata])

HSP 1 Score: 321.6 bits (823), Expect = 4.3e-84
Identity = 165/186 (88.71%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSG 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESGALDS    GSNS 
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSE 60

Query: 61  NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYEDR 120
           NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERYDRPMP+LRNTD+KSSKYEDR
Sbjct: 61  NVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSSKYEDR 120

Query: 121 PAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDS 180
           PAPPGTLNVAQMRH++LLHEGKA+DHDGPMGV+QIAERYNV VAQI+TILQFLSLPPEDS
Sbjct: 121 PAPPGTLNVAQMRHIMLLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDS 180

Query: 181 LREKKK 183
           LR+KKK
Sbjct: 181 LRDKKK 186

[Close]

BLAST of Lcy01g001340 vs. NCBI nr
Match: KAG7013632.1 (hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 321.2 bits (822), Expect = 5.7e-84
Identity = 165/186 (88.71%), Postives = 175/186 (94.09%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDS----GSNSG 60
           MGQAFRRAAGRIKPASSIDS+ASSLKMESVVDRKPP R  EKARESGALDS    GSNS 
Sbjct: 1   MGQAFRRAAGRIKPASSIDSSASSLKMESVVDRKPPPRAAEKARESGALDSGDVLGSNSE 60

Query: 61  NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYEDR 120
           NVLEERD QFDAMLSQM GRI+SKPGGKLEMGEASVVERYDRPMP+LRNTD+KSSKYEDR
Sbjct: 61  NVLEERDPQFDAMLSQMAGRIRSKPGGKLEMGEASVVERYDRPMPRLRNTDLKSSKYEDR 120

Query: 121 PAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPEDS 180
           PAPPGTLNVAQMRH+ILLHEGKA+DHDGPMGV+QIAERYNV VAQI+TILQFLSLPPEDS
Sbjct: 121 PAPPGTLNVAQMRHIILLHEGKAEDHDGPMGVNQIAERYNVGVAQIRTILQFLSLPPEDS 180

Query: 181 LREKKK 183
           L++KKK
Sbjct: 181 LQDKKK 186

[Close]

BLAST of Lcy01g001340 vs. NCBI nr
Match: XP_011657169.1 (uncharacterized protein LOC101223121 [Cucumis sativus] >XP_031743505.1 uncharacterized protein LOC101223121 [Cucumis sativus] >KGN47188.1 hypothetical protein Csa_020957 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 2.8e-83
Identity = 167/188 (88.83%), Postives = 176/188 (93.62%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDS-TASSLKMESVVDRKPPLRVVEKARESGALDSG----SNS 60
           MGQAFRRAAGRIKPASSIDS TASSLKMES+VDRKPP RV EKARESGALDSG    S+S
Sbjct: 1   MGQAFRRAAGRIKPASSIDSTTASSLKMESIVDRKPPPRVAEKARESGALDSGDVPASDS 60

Query: 61  GNVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYED 120
           GN+LEERD QFDAMLSQMVGRIKSKPGGKLEMGEASVVERY RPMPKLR+T++ SSKYED
Sbjct: 61  GNMLEERDPQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYGRPMPKLRDTNISSSKYED 120

Query: 121 RPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPED 180
           RPAPPGTLNVAQMR +ILLHEGKADDHDGPMG+HQIAERYNVSVAQIQTILQFLSLPPED
Sbjct: 121 RPAPPGTLNVAQMRQIILLHEGKADDHDGPMGLHQIAERYNVSVAQIQTILQFLSLPPED 180

Query: 181 SLREKKKD 184
           SLR+K KD
Sbjct: 181 SLRDKIKD 188

[Close]

BLAST of Lcy01g001340 vs. TAIR 10
Match: AT3G21400.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-47
Identity = 98/188 (52.13%), Postives = 132/188 (70.21%), Query Frame = 0


Query: 1   MGQAFRRAAGRIKPASSIDSTASSLKMESVVDRKPPLRVVEKARESGALDSGSNSG---- 60
           MGQ  RRA G+IK       +  S+   S+   +  L  V+ +  + A+D  S+ G    
Sbjct: 1   MGQQLRRAVGKIKEVERSSPSRVSIDRRSLPTEE--LSAVKSSPSTAAVDGVSDKGRRTS 60

Query: 61  --NVLEERDTQFDAMLSQMVGRIKSKPGGKLEMGEASVVERYDRPMPKLRNTDVKSSKYE 120
             NVLEERD ++D ML+QMVGRIK+KPGGK EMGEASVVE   RP+PKLRNT  +S++YE
Sbjct: 61  EDNVLEERDPKYDTMLNQMVGRIKAKPGGKAEMGEASVVETSKRPLPKLRNTTPESTRYE 120

Query: 121 DRPAPPGTLNVAQMRHVILLHEGKADDHDGPMGVHQIAERYNVSVAQIQTILQFLSLPPE 180
           + P P GTLNVAQ+RH++LL +GK+ DH GPMGV++IAE+Y + V+Q+Q I QFLSLP E
Sbjct: 121 ENPVPQGTLNVAQVRHIMLLFQGKSQDHHGPMGVNEIAEKYRIDVSQVQKITQFLSLPQE 180

Query: 181 DSLREKKK 183
            + ++KK+
Sbjct: 181 ITDKQKKQ 186

The following BLAST results are available for this feature:

BLAST of Lcy01g001340 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g001340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L288	3.2e-85	89.25	uncharacterized protein LOC111499180 OS=Cucurbita maxima OX=3661 GN=LOC111499180...	[more]
A0A6J1H4J6	2.1e-84	88.71	uncharacterized protein LOC111459975 OS=Cucurbita moschata OX=3662 GN=LOC1114599...	[more]
A0A0A0KCC5	1.4e-83	88.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G196710 PE=4 SV=1	[more]
A0A1S3C957	3.4e-82	87.77	uncharacterized protein LOC103497865 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1C9H1	7.7e-79	82.90	uncharacterized protein LOC111009550 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]

BLAST of Lcy01g001340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023006464.1	6.7e-85	89.25	uncharacterized protein LOC111499180 [Cucurbita maxima]	[more]
XP_023547640.1	6.7e-85	89.78	uncharacterized protein LOC111806523 [Cucurbita pepo subsp. pepo]	[more]
XP_022958820.1	4.3e-84	88.71	uncharacterized protein LOC111459975 [Cucurbita moschata]	[more]
KAG7013632.1	5.7e-84	88.71	hypothetical protein SDJN02_23799 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_011657169.1	2.8e-83	88.83	uncharacterized protein LOC101223121 [Cucumis sativus] >XP_031743505.1 uncharact...	[more]

BLAST of Lcy01g001340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21400.1	1.6e-47	52.13	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..121
None	No IPR available	PANTHER	PTHR36759	DYNEIN BETA CHAIN, CILIARY PROTEIN	coord: 1..182
None	No IPR available	PANTHER	PTHR36759:SF1	DYNEIN BETA CHAIN, CILIARY PROTEIN	coord: 1..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g001340.1	Lcy01g001340.1	mRNA