Lcy01g000340 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g000340
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	40S ribosomal protein SA
Location	Chr01: 442114 .. 444683 (+)
RNA-Seq Expression	Lcy01g000340
Synteny	Lcy01g000340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAACCCTAGTCCCTTCTCATCTCAACCTCTCAGCCGTTCTGTTTACAGACCCCCACCCCTCCCTGCCTCTTTGTTGGCTTAAAGTCTTCTGCTAACCCTAGCGCAGCTCTCCATTCACTAAGATCCGGCCATGGCGACTGCAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAGAACTGTGACTTCCAAATGGAGCGTTACGTTTTCAAGCGCCGGAACGATGGTAATGTCTTCAATATACTTTACTTTCAGATCTTCGCATTTGAGGGCTTACTAGATGCTCATTACTTCGATTCCTTTTTCATTCTGTTCTCTTTGTTTTCAATATTGGCGGTGATTTCTTCTGGACTGAAACTCTGAGTGCTAATGTGCGCGCGTTGTTATTCTCTAATTGTCTTTACCTGATGGCCTTAATTTTTTTATGTGAATTTCTCGGGATTAGAGCGATCATAACTTCACCAATGCGTATATTTATCCATGTTTTTTTTTTTATTAAATTTGTAATTTTTGACAGTATTTACACTTTGGAGACGCGAGGCTTCGGCTTCTGGCTGTTTTTTTTAGTTTATCTTTTTAGTTTCTTCTGTATTTGCCAAGGACAATGGGTTCTACATGTTTGGGGTGATGGTACTTCTAATTTGATTCCAAAATGTTGGTTCATACGTTAAAGATTTGAAGCACTTAAACCGGTCTCTATTGTTTGAAGAATCAATTTCATTTTCCAATCTGTGATTTCAAGGAATGTTGAGTTATTGGAGGCTCCATGAGAATTGATATCTACATTTTGAATATGGATGAATTTTTTTTTTCTAACTTTCTTTCTTTAGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTGATTGTGGGTATTGAGAACCCACAAGACATCATTGTTCAGTCTGCGAGGCCTTATGGTCAGAGGGCCGTACTGAAGTTCGCTCAACACACTGGTGCACATGCAATAGCCGGGAGGCACACCCCTGGAACTTTCACCAACCAGCTTCAGACCTCATTCAATGAACCACGTCTTCTGATACTTACAGATCCTAGAACTGATCATCAGGTGATTAAGCCTTTCTAAGGACCCATAATCGTTTTTAGTTATTTTTTAAAGTTGAGAAGATGGTCTTCTCTTATAAATTTCAGGTTCACTCTTGTTTTTTTCCCGTATACCTGACTTATTGATGCAATTTGTGTCGCTTGGTTGGTTACTTGTTTGCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGTGACACTGACTCTCCAATGCGGTATGTTGATATTGGTATTCCAGCAAATAACAAGGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCAAGGATGGTTCTACAGATGCGTGGAACAATTCGTGCTGGGCATAAATGGGACGTGATGGTAAGTTCAGAATTTTGTATTCTATCTTTACTTTAGAAGCCACATTCTGACATGAAGTATGAAATCAAGACTTGATTGTTGGAACTTGAATTAAAGGTTTGGATTGAATCATGTGTGTGTTTCTTGTGCAGGTGGATTTGTTTTTCTACCGGGAGCCCGAGGAGGCTAAGGAGCAAGAAGAGGAAGAGGCTGTTGCACCACCAGATTACGGCATTGCTGATTATGGTGCTGCTCCGCTTGTTGCCTCGGATCAATGGGCTGGACAAATTTCTGATGCTCAGTGGGGTGCCTCTGATGTGGTTCCACCACCAGTAGCAGCAGCTGCTGCAGTTGCTCCACCTGTTTCAAATGTCGAGTGGGCCCCTGAGCCAGGTTGAACCCGATTTTCCTTATATGATTTATTTGAATGTTTGTGCCTATTATTAATGTGTTTAGCCTAGACAAATCACGTTGGTTTATGTTTATAACCGTTAGCACCTATCATATCCAGTTACCTTTTAGTTTGTCATTCCGTATCTTTTTTGATCTTGGACATCATTGACCAGGAGTTGTAAGCTAAGGTGCAATGCAACTAATAGTTAAGTTAGTCTGTTTAAGGTGAACAGAAAAAGGACGTTGTCTTTTATTAAGATTATTTTTTGATGCTTTCTTCTGTGTGTTTTGCTTTTTGCAGTTGCTGTAGCAGATGGAGACGAATGGGATGCTGCAGTACCACCACCAGCACCTTCAGTTGAAGGTGGTGCGCCTCCGGCTGCTAGTTGGTTCTAAGGGATGGTTCCAAATGAGAATTGATTTAATCGTTATATGAGTTTGCTTGTTTATGTAGGGGTACCACCTTTTTTGGTTGCAAAATTGACTTGTCTTTTTTTTCCCCCCCCTCATAGTCCAGTTTTAGATTTTGAGATTGAAATTTTGACTTCAATTTTGGTATCTTGATACAATTTTTTCTTTTGGGATAAATGAGAAATTACTTGCCTAAAGGATGTGAGACATCCATATAAATGACATTAAACCATGGATGGTAGATCTTCGGCCAATCAAGGATAAATTAACCTTAAATTATAACGATTGAAT

mRNA sequence

GAAAAACCCTAGTCCCTTCTCATCTCAACCTCTCAGCCGTTCTGTTTACAGACCCCCACCCCTCCCTGCCTCTTTGTTGGCTTAAAGTCTTCTGCTAACCCTAGCGCAGCTCTCCATTCACTAAGATCCGGCCATGGCGACTGCAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAGAACTGTGACTTCCAAATGGAGCGTTACGTTTTCAAGCGCCGGAACGATGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTGATTGTGGGTATTGAGAACCCACAAGACATCATTGTTCAGTCTGCGAGGCCTTATGGTCAGAGGGCCGTACTGAAGTTCGCTCAACACACTGGTGCACATGCAATAGCCGGGAGGCACACCCCTGGAACTTTCACCAACCAGCTTCAGACCTCATTCAATGAACCACGTCTTCTGATACTTACAGATCCTAGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGTGACACTGACTCTCCAATGCGGTATGTTGATATTGGTATTCCAGCAAATAACAAGGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCAAGGATGGTTCTACAGATGCGTGGAACAATTCGTGCTGGGCATAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCCGAGGAGGCTAAGGAGCAAGAAGAGGAAGAGGCTGTTGCACCACCAGATTACGGCATTGCTGATTATGGTGCTGCTCCGCTTGTTGCCTCGGATCAATGGGCTGGACAAATTTCTGATGCTCAGTGGGGTGCCTCTGATGTGGTTCCACCACCAGTAGCAGCAGCTGCTGCAGTTGCTCCACCTGTTTCAAATGTCGAGTGGGCCCCTGAGCCAGTTGCTGTAGCAGATGGAGACGAATGGGATGCTGCAGTACCACCACCAGCACCTTCAGTTGAAGGTGGTGCGCCTCCGGCTGCTAGTTGGTTCTAAGGGATGGTTCCAAATGAGAATTGATTTAATCGTTATATGAGTTTGCTTGTTTATGTAGGGGTACCACCTTTTTTGGTTGCAAAATTGACTTGTCTTTTTTTTCCCCCCCCTCATAGTCCAGTTTTAGATTTTGAGATTGAAATTTTGACTTCAATTTTGGTATCTTGATACAATTTTTTCTTTTGGGATAAATGAGAAATTACTTGCCTAAAGGATGTGAGACATCCATATAAATGACATTAAACCATGGATGGTAGATCTTCGGCCAATCAAGGATAAATTAACCTTAAATTATAACGATTGAAT

Coding sequence (CDS)

ATGGCGACTGCAACAGCACCGCGTCAGCTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCCGCCGAGGTTCATCTAGGCACTAAGAACTGTGACTTCCAAATGGAGCGTTACGTTTTCAAGCGCCGGAACGATGGAATCTACATTATTAACCTTGGTAAGACATGGGAGAAACTTCAGCTGGCTGCCAGAGTGATTGTGGGTATTGAGAACCCACAAGACATCATTGTTCAGTCTGCGAGGCCTTATGGTCAGAGGGCCGTACTGAAGTTCGCTCAACACACTGGTGCACATGCAATAGCCGGGAGGCACACCCCTGGAACTTTCACCAACCAGCTTCAGACCTCATTCAATGAACCACGTCTTCTGATACTTACAGATCCTAGAACTGATCATCAGCCCATCAAGGAAGCTGCCCTTGGAAACATTCCCACAATTGCCTTTTGTGACACTGACTCTCCAATGCGGTATGTTGATATTGGTATTCCAGCAAATAACAAGGGGAAACATAGCATAGGATGTCTATTCTGGCTTTTGGCAAGGATGGTTCTACAGATGCGTGGAACAATTCGTGCTGGGCATAAATGGGACGTGATGGTGGATTTGTTTTTCTACCGGGAGCCCGAGGAGGCTAAGGAGCAAGAAGAGGAAGAGGCTGTTGCACCACCAGATTACGGCATTGCTGATTATGGTGCTGCTCCGCTTGTTGCCTCGGATCAATGGGCTGGACAAATTTCTGATGCTCAGTGGGGTGCCTCTGATGTGGTTCCACCACCAGTAGCAGCAGCTGCTGCAGTTGCTCCACCTGTTTCAAATGTCGAGTGGGCCCCTGAGCCAGTTGCTGTAGCAGATGGAGACGAATGGGATGCTGCAGTACCACCACCAGCACCTTCAGTTGAAGGTGGTGCGCCTCCGGCTGCTAGTTGGTTCTAA

Protein sequence

MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASDQWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSVEGGAPPAASWF

Homology

[Close]

BLAST of Lcy01g000340 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 3.2e-130
Identity = 240/296 (81.08%), Postives = 249/296 (84.12%), Query Frame = 0


Query: 2   ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQ 61
           A A  PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  LAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           LAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASDQ 241
           RMVLQMRGTIR G KWDVMVDLFFYREPEEAK+QEEEEA A  DY I D+ A  + A  Q
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPA-VDYAITDFNAGAIAADGQ 246

Query: 242 WAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEW-APEPVAVADGDEWDAAVPPP 297
           W G I D  W  SD VP P+       P V  V W AP     A G +W  AVPPP
Sbjct: 247 WPGTI-DQSW--SDAVPQPI-------PAVPGVNWGAPAEAPAAAGGDWGEAVPPP 291

[Close]

BLAST of Lcy01g000340 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 1.1e-127
Identity = 246/317 (77.60%), Postives = 253/317 (79.81%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           AT  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLA
Sbjct: 2   ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLA 61

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 184 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPL--VASDQ 243
           VLQMR TI  GHKWDVMVDLFFYREPEE KEQE +E VA PDYGI DY A  L  +    
Sbjct: 182 VLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGD 241

Query: 244 WAGQISDA-QWGASDVVPPPVAAAAAVAPPVSNVEW---APEPVAVADG-DEWDAAVPPP 303
           W   I+DA QWGA   VP     A A  P V    W   AP P AV    D WDAA  PP
Sbjct: 242 WGAPITDAPQWGAD--VP-----AVAPIPAVPGSNWGDAAPMPSAVPIATDGWDAAAAPP 301

Query: 304 A---PSVEGGAPPAASW 311
               P V  G PP A W
Sbjct: 302 VAVPPPVVEGVPPPAGW 311

[Close]

BLAST of Lcy01g000340 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 447.2 bits (1149), Expect = 1.5e-124
Identity = 237/314 (75.48%), Postives = 256/314 (81.53%), Query Frame = 0


Query: 1   MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT TAP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAAR+IV IEN QDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVAS 240
           LARMVLQMRGTIR G KWDVMVDLFFYREPEEAK+ EE+E VA PDY IAD+  + + + 
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 241 DQWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEW-APEPVAVADGDEWDAAVPPP-- 300
            QW   I D  W  +D VP P+       P V  V W APE VA     +W  AVPPP  
Sbjct: 241 GQWPAAI-DQPW--NDAVPQPI-------PAVPAVNWAAPEAVA----GDWGEAVPPPQQ 299

Query: 301 APSVEGGAPPAASW 311
            P+    + PA  W
Sbjct: 301 IPTAGIESVPATGW 299

[Close]

BLAST of Lcy01g000340 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.3e-123
Identity = 236/305 (77.38%), Postives = 249/305 (81.64%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           A+  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LA
Sbjct: 2   ASGARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLA 61

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 184 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASDQWA 243
           VLQMRG I  GHKW+VMVDLFFYREPEE K+QEEE+ +   DY +ADY AAP+  +DQW 
Sbjct: 182 VLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGADQW- 241

Query: 244 GQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPE-PVAVADGDEWDAAVPPPAPSVEG 303
             I DAQWG  DVV P  +A  A         W    P+A   GD WDAA  PP P   G
Sbjct: 242 NAIPDAQWG-GDVVQPANSAVPAGT-------WTDAGPIA---GDGWDAAAAPPVPGAVG 292

Query: 304 GAPPA 308
              PA
Sbjct: 302 LDVPA 292

[Close]

BLAST of Lcy01g000340 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 424.9 bits (1091), Expect = 8.1e-118
Identity = 223/313 (71.25%), Postives = 242/313 (77.32%), Query Frame = 0


Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPA 300
            DQW   QI DA W      P   A AAA         W+    A ADG  W+AA PP  
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAAA--------SWSDSAAAPADGG-WEAAAPP-- 297

Query: 301 PSVEGGAPPAASW 311
                   PAA W
Sbjct: 301 -----SGAPAAGW 297

[Close]

BLAST of Lcy01g000340 vs. ExPASy TrEMBL
Match: A0A0A0L946 (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 4.7e-161
Identity = 288/311 (92.60%), Postives = 292/311 (93.89%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWGA D++P P  AA  V PPVSNVEW  EPV     D WDAA PPPAPS 
Sbjct: 241 QWAGQISDAQWGAPDLIPAP-DAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSA 300

Query: 301 EGGAPPAASWF 312
           EGGA PAASWF
Sbjct: 301 EGGA-PAASWF 309

[Close]

BLAST of Lcy01g000340 vs. ExPASy TrEMBL
Match: A0A1S3CDH5 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 8.0e-161
Identity = 289/311 (92.93%), Postives = 295/311 (94.86%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWGA D++P P   AA V PPVSNVEW  EPVA+A  D WDAAVPPPAP+ 
Sbjct: 241 QWAGQISDAQWGAPDLIPAP--DAAVVVPPVSNVEWTQEPVALA-SDGWDAAVPPPAPAA 300

Query: 301 EGGAPPAASWF 312
           EGGA PAASWF
Sbjct: 301 EGGA-PAASWF 307

[Close]

BLAST of Lcy01g000340 vs. ExPASy TrEMBL
Match: A0A6J1DEM6 (40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111020345 PE=3 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 1.4e-160
Identity = 288/311 (92.60%), Postives = 293/311 (94.21%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVA PDYGIAD+GAAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVA-PDYGIADFGAAPLVASD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWGA DVVP      AA APPVSNVEW+ EPVA    D WDAAVPPPAP+V
Sbjct: 241 QWAGQISDAQWGAPDVVP------AAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAV 300

Query: 301 EGGAPPAASWF 312
           EGGAPPA+ WF
Sbjct: 301 EGGAPPASGWF 304

[Close]

BLAST of Lcy01g000340 vs. ExPASy TrEMBL
Match: A0A6J1GCP6 (40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111452769 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 3.0e-160
Identity = 289/310 (93.23%), Postives = 294/310 (94.84%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE +EEEAVAPPDYGIADYGAAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-KEEEAVAPPDYGIADYGAAPLVASD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWG  DVVPPPV  AAAV PPV +VEWA EPVA+A  D WD AVPPPAPS 
Sbjct: 241 QWAGQISDAQWGDPDVVPPPV--AAAVVPPVPSVEWAQEPVALA-SDGWDVAVPPPAPSA 300

Query: 301 EGGAPPAASW 311
           EG APPAASW
Sbjct: 301 EGAAPPAASW 306

[Close]

BLAST of Lcy01g000340 vs. ExPASy TrEMBL
Match: A0A6J1K9M4 (40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111492923 PE=3 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.2e-159
Identity = 288/310 (92.90%), Postives = 294/310 (94.84%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATGTAPRQLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           Q+AARVIVGIENPQ+IIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QMAARVIVGIENPQNIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE +EEEAVAPPDYGIADYGAAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKE-KEEEAVAPPDYGIADYGAAPLVASD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWG  DVVPPPV  AAAV PPVS+VEWA EPVA+A  D WD AVPPPAP  
Sbjct: 241 QWAGQISDAQWGDPDVVPPPV--AAAVVPPVSSVEWAQEPVALA-SDGWDVAVPPPAPPT 300

Query: 301 EGGAPPAASW 311
           EG APPAASW
Sbjct: 301 EGAAPPAASW 306

[Close]

BLAST of Lcy01g000340 vs. NCBI nr
Match: XP_038903491.1 (40S ribosomal protein SA-like [Benincasa hispida])

HSP 1 Score: 579.3 bits (1492), Expect = 1.9e-161
Identity = 289/311 (92.93%), Postives = 294/311 (94.53%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIADYG A LV+SD
Sbjct: 181 ARMVLQMRGTIRAGHEWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGASLVSSD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWGA DVVP P      +APPV NVEW  EPVA+A  D WDAAVPPPAPS 
Sbjct: 241 QWAGQISDAQWGAPDVVPAP---DGVIAPPVPNVEWTQEPVALA-SDGWDAAVPPPAPSA 300

Query: 301 EGGAPPAASWF 312
           EGGAPPAASWF
Sbjct: 301 EGGAPPAASWF 307

[Close]

BLAST of Lcy01g000340 vs. NCBI nr
Match: XP_031738662.1 (40S ribosomal protein SA isoform X2 [Cucumis sativus])

HSP 1 Score: 578.2 bits (1489), Expect = 4.3e-161
Identity = 290/311 (93.25%), Postives = 295/311 (94.86%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWGA D++P P  AA  V PPVSNVEW  EPVA+A  D WDAA PPPAPS 
Sbjct: 241 QWAGQISDAQWGAPDLIPAP-DAAPVVVPPVSNVEWTQEPVAIA-SDGWDAAAPPPAPSA 300

Query: 301 EGGAPPAASWF 312
           EGGA PAASWF
Sbjct: 301 EGGA-PAASWF 308

[Close]

BLAST of Lcy01g000340 vs. NCBI nr
Match: XP_004144441.1 (40S ribosomal protein SA isoform X1 [Cucumis sativus] >KGN58465.1 hypothetical protein Csa_002182 [Cucumis sativus])

HSP 1 Score: 577.0 bits (1486), Expect = 9.7e-161
Identity = 288/311 (92.60%), Postives = 292/311 (93.89%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWGA D++P P  AA  V PPVSNVEW  EPV     D WDAA PPPAPS 
Sbjct: 241 QWAGQISDAQWGAPDLIPAP-DAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSA 300

Query: 301 EGGAPPAASWF 312
           EGGA PAASWF
Sbjct: 301 EGGA-PAASWF 309

[Close]

BLAST of Lcy01g000340 vs. NCBI nr
Match: XP_008460336.2 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo])

HSP 1 Score: 576.2 bits (1484), Expect = 1.7e-160
Identity = 289/311 (92.93%), Postives = 295/311 (94.86%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIADYG APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWGA D++P P   AA V PPVSNVEW  EPVA+A  D WDAAVPPPAP+ 
Sbjct: 241 QWAGQISDAQWGAPDLIPAP--DAAVVVPPVSNVEWTQEPVALA-SDGWDAAVPPPAPAA 300

Query: 301 EGGAPPAASWF 312
           EGGA PAASWF
Sbjct: 301 EGGA-PAASWF 307

[Close]

BLAST of Lcy01g000340 vs. NCBI nr
Match: XP_022152685.1 (40S ribosomal protein SA-like [Momordica charantia])

HSP 1 Score: 575.5 bits (1482), Expect = 2.8e-160
Identity = 288/311 (92.60%), Postives = 293/311 (94.21%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASD 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVA PDYGIAD+GAAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVA-PDYGIADFGAAPLVASD 240

Query: 241 QWAGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPAPSV 300
           QWAGQISDAQWGA DVVP      AA APPVSNVEW+ EPVA    D WDAAVPPPAP+V
Sbjct: 241 QWAGQISDAQWGAPDVVP------AAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAV 300

Query: 301 EGGAPPAASWF 312
           EGGAPPA+ WF
Sbjct: 301 EGGAPPASGWF 304

[Close]

BLAST of Lcy01g000340 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 424.9 bits (1091), Expect = 5.7e-119
Identity = 223/313 (71.25%), Postives = 242/313 (77.32%), Query Frame = 0


Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPA 300
            DQW   QI DA W      P   A AAA         W+    A ADG  W+AA PP  
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAAA--------SWSDSAAAPADGG-WEAAAPP-- 297

Query: 301 PSVEGGAPPAASW 311
                   PAA W
Sbjct: 301 -----SGAPAAGW 297

[Close]

BLAST of Lcy01g000340 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 419.9 bits (1078), Expect = 1.8e-117
Identity = 222/313 (70.93%), Postives = 241/313 (77.00%), Query Frame = 0


Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPA 300
            DQW   QI DA W      P   A AAA         W+      ADG  W+AA PP  
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAAA--------SWSDS----ADGG-WEAAAPP-- 293

Query: 301 PSVEGGAPPAASW 311
                   PAA W
Sbjct: 301 -----SGAPAAGW 293

[Close]

BLAST of Lcy01g000340 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 417.9 bits (1073), Expect = 7.0e-117
Identity = 219/295 (74.24%), Postives = 241/295 (81.69%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 184 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADYGAAPLVASDQW- 243
           VLQMRGTI A  KWDVMVDLFFYREPEEAK++ +EEA    DYG        +V  DQW 
Sbjct: 187 VLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYG--------MVGGDQWT 246

Query: 244 AGQISDAQWGASDVVPPPVAAAAAVAPPVSNVEWAPEPVAVADGDEWDAAVPPPA 298
             QISDA W  S  V  P++AA AV             V VA G  W+AA  P A
Sbjct: 247 TAQISDAAW--SGEVEQPISAAPAVG------------VTVAAG--WEAASVPAA 277

[Close]

BLAST of Lcy01g000340 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 368.6 bits (945), Expect = 4.9e-102
Identity = 175/199 (87.94%), Postives = 191/199 (95.98%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 64  ARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 124 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 184 VLQMRGTIRAGHKWDVMVD 203
           VLQMRGTI A  KWDVMV+
Sbjct: 187 VLQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:

BLAST of Lcy01g000340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22518	3.2e-130	81.08	40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1	[more]
A5BUU4	1.1e-127	77.60	40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV...	[more]
O65751	1.5e-124	75.48	40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1	[more]
O80377	1.3e-123	77.38	40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1	[more]
Q08682	8.1e-118	71.25	40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3	[more]

BLAST of Lcy01g000340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L946	4.7e-161	92.60	40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1	[more]
A0A1S3CDH5	8.0e-161	92.93	40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1	[more]
A0A6J1DEM6	1.4e-160	92.60	40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111020345 PE=3 SV=...	[more]
A0A6J1GCP6	3.0e-160	93.23	40S ribosomal protein SA OS=Cucurbita moschata OX=3662 GN=LOC111452769 PE=3 SV=1	[more]
A0A6J1K9M4	1.2e-159	92.90	40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111492923 PE=3 SV=1	[more]

BLAST of Lcy01g000340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903491.1	1.9e-161	92.93	40S ribosomal protein SA-like [Benincasa hispida]	[more]
XP_031738662.1	4.3e-161	93.25	40S ribosomal protein SA isoform X2 [Cucumis sativus]	[more]
XP_004144441.1	9.7e-161	92.60	40S ribosomal protein SA isoform X1 [Cucumis sativus] >KGN58465.1 hypothetical p...	[more]
XP_008460336.2	1.7e-160	92.93	PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]	[more]
XP_022152685.1	2.8e-160	92.60	40S ribosomal protein SA-like [Momordica charantia]	[more]

BLAST of Lcy01g000340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72370.1	5.7e-119	71.25	40s ribosomal protein SA	[more]
AT1G72370.2	1.8e-117	70.93	40s ribosomal protein SA	[more]
AT3G04770.2	7.0e-117	74.24	40s ribosomal protein SA B	[more]
AT3G04770.1	4.9e-102	87.94	40s ribosomal protein SA B	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 121..138 score: 44.62 coord: 47..56 score: 64.92 coord: 17..35 score: 36.11 coord: 138..149 score: 51.15 coord: 159..173 score: 53.64 coord: 96..113 score: 47.01
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 20..113 e-value: 3.2E-13 score: 49.4 coord: 119..184 e-value: 5.1E-12 score: 45.5
IPR001865	Ribosomal protein S2	CDD	cd01425	RPS2	coord: 20..186 e-value: 1.98536E-73 score: 222.457
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	TIGRFAM	TIGR01012	TIGR01012	coord: 12..208 e-value: 4.6E-96 score: 317.9
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	PANTHER	PTHR11489	40S RIBOSOMAL PROTEIN SA	coord: 9..310
None	No IPR available	GENE3D	3.40.50.10490		coord: 16..222 e-value: 1.0E-104 score: 350.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..311
None	No IPR available	PANTHER	PTHR11489:SF25	40S RIBOSOMAL PROTEIN SA	coord: 9..310
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00962	RIBOSOMAL_S2_1	coord: 17..28
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00963	RIBOSOMAL_S2_2	coord: 121..145
IPR027498	Ribosomal protein S2, eukaryotic	HAMAP	MF_03015	Ribosomal_S2_euk	coord: 4..292 score: 50.737915
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 12..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g000340.1	Lcy01g000340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome