Lcy01g000050 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy01g000050
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Mitochondrial transcription termination factor family protein
Location	Chr01: 84193 .. 85793 (+)
RNA-Seq Expression	Lcy01g000050
Synteny	Lcy01g000050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGTGTATCATTTTGTATGCAGTGCGTGTAAATGTGGCAGCGAGGAAGTTTGTTCGGTGGCAGTCATCGTGTCGCCTGAACATGACCGCAGTTGGGAAGAAAAGAAAATTTGCCAACCTAAAAAATGAATCCACTGCAGCTCTGCAAGCACAAGGCGACTCCATGGACCGAATTCCAAATAAAGCAGAGATGGGAGAGGGCCAAGAATCCAAGACGAAAGCCCAAGCTGGAGTTGAAATCCAGGTCTGTATTATAACTTTATAGTAATGTAATCTAAAATAATTAACTAATGCGGAAACAGGGTACGCCTTTTAATTATGGCATTCAGGAGAGAGGGGAAATATTCTTCTTCTACAGGCCTAAAGTTGAAAAGCAAGAGGCGCATAGCCACGATGACGTGCAACGCTTGTACATTATCTTGCGTCCAGAGTCAGGTGAGAAGGCGGTGGAGGAGAAACAAAACCCAAATTCAGGTAAGGAAGGGGGCCTTAAGAAACCATTACATTCTATTTCTGGCCAAGGCCAATCCAGCTCTGGAACTGGAACCAAAGGTGGACATGGCACTCACACCCAGGTTAATTAATTAAACCAAACCTACAGTCCTTTTGATGATTTTAGCGTATTATTTTCAATCGAACTTTACTTCGATGGGCCGGGATATCAGCATATATTAGTCTTCTTGTTTACATCTTTTAACATAGGAAGTGGACATTGAAAAGCAACCCCTGTTGCGGTTCATCATTATGGGTCGAAAAAGCCTTCCACACCCAGCCCAGAAGAGTCGTCCTTACTGGGGATTTGTAGATATGGTGACAACCGATGTGCAAGATGTCAAGACTGCTCTTCAAGGAGGTACGTACCTCGTAAGTACATAATTAATAGTGTGTATGGGATAGCTTTTGAAAAAATAAAATAAAATAAAATCACTTTCGATGGCATACAGAGGAATACGATACTTCGACGAGAGGACATCGCCGTATTTCTGCTGCAAGAGCTCTGGGCGAAGGCATTTACCGTATTCTGAGGCATAATCCACATCCTCAGAAGTTCCAGAGTAACTACCACACTCATTTGATCTACAAGCTAGAGTTTCCCTCGGCAGATGAGAAAAATGAGCCTCAACAGTCATTTAACATCGAAAGAGAAGGCTCGTTTCTGATACAAATAAAGAACCCAGATCAAGAGGGAGCTGGTTCTCACTACAAGCGCAGGGCTCAATTTCCAGCGCATTTGCAAGGTCAAATTGGGAATAAAAGATATCACCCAGCTGACCCACCCGACTACTTGAATTTTGAAGGGTGTGAGTTCTTGCTGATATCGGCTTCAGATGATATAGAAGAGGAATTGGGGTTGGAACTGAAATGTGACACTGAAGAATGTGATTTGGTGAAGACGTTTGGAGAGACTGCTTCCACGCAGCCTCTTCTCAAAGGCACTTGGGTCTAGTGTGGTCTAGAGATATGATATGAATAGGCTTCTTCTAGTTCTACTTAATTAATTAGCAGTTTTGGTTCAACTAGTAAATTTTAAATGGATATATGTATGGCTACTAGTAAAATGAAAAATGTTGTTATGACTTGGATTTATGGAGGGGTTTGTGC

mRNA sequence

GGGTGTATCATTTTGTATGCAGTGCGTGTAAATGTGGCAGCGAGGAAGTTTGTTCGGTGGCAGTCATCGTGTCGCCTGAACATGACCGCAGTTGGGAAGAAAAGAAAATTTGCCAACCTAAAAAATGAATCCACTGCAGCTCTGCAAGCACAAGGCGACTCCATGGACCGAATTCCAAATAAAGCAGAGATGGGAGAGGGCCAAGAATCCAAGACGAAAGCCCAAGCTGGAGTTGAAATCCAGGAGAGAGGGGAAATATTCTTCTTCTACAGGCCTAAAGTTGAAAAGCAAGAGGCGCATAGCCACGATGACGTGCAACGCTTGTACATTATCTTGCGTCCAGAGTCAGGTGAGAAGGCGGTGGAGGAGAAACAAAACCCAAATTCAGGTAAGGAAGGGGGCCTTAAGAAACCATTACATTCTATTTCTGGCCAAGGCCAATCCAGCTCTGGAACTGGAACCAAAGGTGGACATGGCACTCACACCCAGGAAGTGGACATTGAAAAGCAACCCCTGTTGCGGTTCATCATTATGGGTCGAAAAAGCCTTCCACACCCAGCCCAGAAGAGTCGTCCTTACTGGGGATTTGTAGATATGGTGACAACCGATGTGCAAGATGTCAAGACTGCTCTTCAAGGAGAGGAATACGATACTTCGACGAGAGGACATCGCCGTATTTCTGCTGCAAGAGCTCTGGGCGAAGGCATTTACCGTATTCTGAGGCATAATCCACATCCTCAGAAGTTCCAGAGTAACTACCACACTCATTTGATCTACAAGCTAGAGTTTCCCTCGGCAGATGAGAAAAATGAGCCTCAACAGTCATTTAACATCGAAAGAGAAGGCTCGTTTCTGATACAAATAAAGAACCCAGATCAAGAGGGAGCTGGTTCTCACTACAAGCGCAGGGCTCAATTTCCAGCGCATTTGCAAGGTCAAATTGGGAATAAAAGATATCACCCAGCTGACCCACCCGACTACTTGAATTTTGAAGGGTGTGAGTTCTTGCTGATATCGGCTTCAGATGATATAGAAGAGGAATTGGGGTTGGAACTGAAATGTGACACTGAAGAATGTGATTTGGTGAAGACGTTTGGAGAGACTGCTTCCACGCAGCCTCTTCTCAAAGGCACTTGGGTCTAGTGTGGTCTAGAGATATGATATGAATAGGCTTCTTCTAGTTCTACTTAATTAATTAGCAGTTTTGGTTCAACTAGTAAATTTTAAATGGATATATGTATGGCTACTAGTAAAATGAAAAATGTTGTTATGACTTGGATTTATGGAGGGGTTTGTGC

Coding sequence (CDS)

ATGACCGCAGTTGGGAAGAAAAGAAAATTTGCCAACCTAAAAAATGAATCCACTGCAGCTCTGCAAGCACAAGGCGACTCCATGGACCGAATTCCAAATAAAGCAGAGATGGGAGAGGGCCAAGAATCCAAGACGAAAGCCCAAGCTGGAGTTGAAATCCAGGAGAGAGGGGAAATATTCTTCTTCTACAGGCCTAAAGTTGAAAAGCAAGAGGCGCATAGCCACGATGACGTGCAACGCTTGTACATTATCTTGCGTCCAGAGTCAGGTGAGAAGGCGGTGGAGGAGAAACAAAACCCAAATTCAGGTAAGGAAGGGGGCCTTAAGAAACCATTACATTCTATTTCTGGCCAAGGCCAATCCAGCTCTGGAACTGGAACCAAAGGTGGACATGGCACTCACACCCAGGAAGTGGACATTGAAAAGCAACCCCTGTTGCGGTTCATCATTATGGGTCGAAAAAGCCTTCCACACCCAGCCCAGAAGAGTCGTCCTTACTGGGGATTTGTAGATATGGTGACAACCGATGTGCAAGATGTCAAGACTGCTCTTCAAGGAGAGGAATACGATACTTCGACGAGAGGACATCGCCGTATTTCTGCTGCAAGAGCTCTGGGCGAAGGCATTTACCGTATTCTGAGGCATAATCCACATCCTCAGAAGTTCCAGAGTAACTACCACACTCATTTGATCTACAAGCTAGAGTTTCCCTCGGCAGATGAGAAAAATGAGCCTCAACAGTCATTTAACATCGAAAGAGAAGGCTCGTTTCTGATACAAATAAAGAACCCAGATCAAGAGGGAGCTGGTTCTCACTACAAGCGCAGGGCTCAATTTCCAGCGCATTTGCAAGGTCAAATTGGGAATAAAAGATATCACCCAGCTGACCCACCCGACTACTTGAATTTTGAAGGGTGTGAGTTCTTGCTGATATCGGCTTCAGATGATATAGAAGAGGAATTGGGGTTGGAACTGAAATGTGACACTGAAGAATGTGATTTGGTGAAGACGTTTGGAGAGACTGCTTCCACGCAGCCTCTTCTCAAAGGCACTTGGGTCTAG

Protein sequence

MTAVGKKRKFANLKNESTAALQAQGDSMDRIPNKAEMGEGQESKTKAQAGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAVEEKQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRKSLPHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILRHNPHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGAGSHYKRRAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCDTEECDLVKTFGETASTQPLLKGTWV

Homology

[Close]

BLAST of Lcy01g000050 vs. ExPASy TrEMBL
Match: A0A6J1GXU8 (uncharacterized protein LOC111457833 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457833 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 3.0e-124
Identity = 232/318 (72.96%), Postives = 253/318 (79.56%), Query Frame = 0


Query: 37  MGEGQESKTKAQAGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAVEE 96
           MGEG+ESKT+A+AGVEIQERGEIFFFYRPKV KQ+ H  DDVQRLYIILRPESGE+AVEE
Sbjct: 1   MGEGEESKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60

Query: 97  KQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRKSL 156
           KQ PN+                                TQEV+IEKQPLLRF+IMGRKSL
Sbjct: 61  KQLPNASSR----------------------------RTQEVNIEKQPLLRFMIMGRKSL 120

Query: 157 PHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILRH- 216
           P+PAQK RPYWGFVDMVTT+VQDVK ALQ  EYD+STRGHR ISAARA+GEGIYR++RH 
Sbjct: 121 PNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHK 180

Query: 217 NPHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGAGSHYKR 276
            P  QK + +YHTHLIYKLEFPS DE+NEPQ SFNI REGSFLI IKNPD EG GS  KR
Sbjct: 181 QPDTQKSKKSYHTHLIYKLEFPSEDEENEPQNSFNIGREGSFLIMIKNPDVEGDGSRNKR 240

Query: 277 RAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCDTEECDLV 336
           RAQFPAHLQG+ G+ R+HPADPPDYLNFEGCEFLLISASDDIE+ELGLEL     ECDLV
Sbjct: 241 RAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTTAPHECDLV 290

Query: 337 KTFGETASTQPLLKGTWV 354
           K FGET STQPLLKGTWV
Sbjct: 301 KMFGETTSTQPLLKGTWV 290

[Close]

BLAST of Lcy01g000050 vs. ExPASy TrEMBL
Match: A0A5D3BUL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00100 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.9e-122
Identity = 234/322 (72.67%), Postives = 260/322 (80.75%), Query Frame = 0


Query: 37  MGEGQES-KTKAQ-AGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAV 96
           MGEG+E  KTKA+   VEIQERGEIFF YRPKVEKQE HS D+VQRLYIILRP SGEK V
Sbjct: 1   MGEGEEELKTKAEDHEVEIQERGEIFFLYRPKVEKQEVHSPDEVQRLYIILRPLSGEKTV 60

Query: 97  EEKQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRK 156
           EEKQ  +                           GG  THTQEV+I+KQPLLRFIIMGRK
Sbjct: 61  EEKQCKD---------------------------GGQSTHTQEVNIKKQPLLRFIIMGRK 120

Query: 157 SLPHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILR 216
           SLPHP+ +SRPYWGFVDMVTT+VQ++K ALQGEEYDTSTRGHR ISAARALGEGIYRILR
Sbjct: 121 SLPHPSHRSRPYWGFVDMVTTNVQEIKIALQGEEYDTSTRGHRHISAARALGEGIYRILR 180

Query: 217 HNPHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGAG---S 276
           HNP   K ++N HTHLIYKLEFP+ADEKNEPQ+SFNIEREGSF+IQIKNP+Q GAG   S
Sbjct: 181 HNP---KNKNNNHTHLIYKLEFPAADEKNEPQKSFNIEREGSFVIQIKNPEQGGAGGSSS 240

Query: 277 HYKRRAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCDTEE 336
            +KRRAQFPAHLQGQ G+KRY PADPP++LNFEGCEFLLISASDDIE+ELGLEL  + EE
Sbjct: 241 QHKRRAQFPAHLQGQFGHKRYCPADPPEFLNFEGCEFLLISASDDIEQELGLELFTEGEE 292

Query: 337 CDLVKTFGETASTQPLLKGTWV 354
           CDLVKTFG+  ST+PL +GTWV
Sbjct: 301 CDLVKTFGDAVSTKPLFEGTWV 292

[Close]

BLAST of Lcy01g000050 vs. ExPASy TrEMBL
Match: A0A1S3B9M2 (uncharacterized protein LOC103487535 OS=Cucumis melo OX=3656 GN=LOC103487535 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 4.9e-122
Identity = 234/322 (72.67%), Postives = 260/322 (80.75%), Query Frame = 0


Query: 37  MGEGQES-KTKAQ-AGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAV 96
           MGEG+E  KTKA+   VEIQERGEIFF YRPKVEKQE HS D+VQRLYIILRP SGEK V
Sbjct: 1   MGEGEEELKTKAEDHEVEIQERGEIFFLYRPKVEKQEVHSPDEVQRLYIILRPLSGEKTV 60

Query: 97  EEKQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRK 156
           EEKQ  +                           GG  THTQEV+I+KQPLLRFIIMGRK
Sbjct: 61  EEKQCKD---------------------------GGQSTHTQEVNIKKQPLLRFIIMGRK 120

Query: 157 SLPHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILR 216
           SLPHP+ +SRPYWGFVDMVTT+VQ++K ALQGEEYDTSTRGHR ISAARALGEGIYRILR
Sbjct: 121 SLPHPSHRSRPYWGFVDMVTTNVQEIKIALQGEEYDTSTRGHRHISAARALGEGIYRILR 180

Query: 217 HNPHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGAG---S 276
           HNP   K ++N HTHLIYKLEFP+ADEKNEPQ+SFNIEREGSF+IQIKNP+Q GAG   S
Sbjct: 181 HNP---KNKNNNHTHLIYKLEFPAADEKNEPQKSFNIEREGSFVIQIKNPEQGGAGGSSS 240

Query: 277 HYKRRAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCDTEE 336
            +KRRAQFPAHLQGQ G+KRY PADPP++LNFEGCEFLLISASDDIE+ELGLEL  + EE
Sbjct: 241 QHKRRAQFPAHLQGQFGHKRYCPADPPEFLNFEGCEFLLISASDDIEQELGLELFTEGEE 292

Query: 337 CDLVKTFGETASTQPLLKGTWV 354
           CDLVKTFG+  ST+PL +GTWV
Sbjct: 301 CDLVKTFGDAVSTKPLFEGTWV 292

[Close]

BLAST of Lcy01g000050 vs. ExPASy TrEMBL
Match: A0A6J5UCV4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18607 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.9e-118
Identity = 229/328 (69.82%), Postives = 258/328 (78.66%), Query Frame = 0


Query: 37  MGEGQESKTKAQAGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAVEE 96
           MG+G E KT+A A VEIQERGEIFFFYRPKV K+EAHS DDVQRLYI+LRPESGE+ +EE
Sbjct: 1   MGQGDEVKTRADAQVEIQERGEIFFFYRPKVNKEEAHSPDDVQRLYIVLRPESGERPIEE 60

Query: 97  KQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRKSL 156
           KQ+P+SGKEG  KK     SG+  S  G  ++GGHG   QEV+IEKQPLLRFI+MGRKSL
Sbjct: 61  KQDPDSGKEGAKKK--RPNSGEKGSGGGQSSEGGHG--RQEVNIEKQPLLRFIVMGRKSL 120

Query: 157 PHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILRHN 216
           P P++K RPYWGFV+MVTT++ DVKTALQGEEYDT T GHR  SAARALGEGIYRI+RH 
Sbjct: 121 PDPSKKGRPYWGFVEMVTTNIDDVKTALQGEEYDTKTEGHRHTSAARALGEGIYRIVRHK 180

Query: 217 PHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGA------- 276
              +K     HTHLIYKLEFP  DE NEPQ+S NI+ EGSF IQIKNPDQ G+       
Sbjct: 181 EGKKK----PHTHLIYKLEFPPEDENNEPQESLNIKHEGSFHIQIKNPDQHGSSSTSQFR 240

Query: 277 GSHYKRRAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCD- 336
           G    RRA FPAHLQGQ GN RY PADPPD+LN+EGCEFLLISASDDIEEELGLEL+ + 
Sbjct: 241 GLQNNRRAMFPAHLQGQFGNLRYCPADPPDFLNYEGCEFLLISASDDIEEELGLELQTEG 300

Query: 337 --TEEC-DLVKTFGETASTQPLLKGTWV 354
              E C DL+KTFGETAST  LL+GTWV
Sbjct: 301 EAVESCSDLIKTFGETASTSSLLRGTWV 320

[Close]

BLAST of Lcy01g000050 vs. ExPASy TrEMBL
Match: A0A5E4GFE8 (PREDICTED: conserved OS=Prunus dulcis OX=3755 GN=ALMOND_2B029682 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 4.3e-118
Identity = 229/328 (69.82%), Postives = 258/328 (78.66%), Query Frame = 0


Query: 37  MGEGQESKTKAQAGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAVEE 96
           MG+G+E KT+A A VEIQERGEIFFFYRPKV K+EAHS DDVQRLYI+LRPESGE+ +EE
Sbjct: 1   MGQGEEVKTRADAQVEIQERGEIFFFYRPKVNKEEAHSPDDVQRLYIVLRPESGERPIEE 60

Query: 97  KQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRKSL 156
           KQ P+SGKEG  KK   S SG+  S     ++GGHG   QEV+IEKQPLLRFI+MGRKSL
Sbjct: 61  KQEPDSGKEGAKKK--GSNSGEKGSGRSQSSEGGHG--RQEVNIEKQPLLRFIVMGRKSL 120

Query: 157 PHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILRHN 216
           P P++K RPYWGFV+MVTT++ DVKTALQGEEYDT T GHR  SAARALGEGIYRI+RH 
Sbjct: 121 PDPSKKGRPYWGFVEMVTTNIDDVKTALQGEEYDTKTEGHRHTSAARALGEGIYRIVRHK 180

Query: 217 PHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGA------- 276
              +K     HTHLIYKLEFP  DE NEPQ+S NI+ EGSF IQIKNPDQ G+       
Sbjct: 181 EGKKK----PHTHLIYKLEFPPEDENNEPQESLNIKHEGSFHIQIKNPDQHGSSSTSRFR 240

Query: 277 GSHYKRRAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCD- 336
           G    RRA FPAHLQGQ GN RY PADPPD+LN+EGCEFLLISASDDIEEELGLEL+ + 
Sbjct: 241 GLQNNRRAMFPAHLQGQFGNLRYCPADPPDFLNYEGCEFLLISASDDIEEELGLELQTEG 300

Query: 337 --TEEC-DLVKTFGETASTQPLLKGTWV 354
              E C DL+KTFGETAST  LL+GTWV
Sbjct: 301 EAVESCSDLIKTFGETASTSSLLRGTWV 320

[Close]

BLAST of Lcy01g000050 vs. NCBI nr
Match: XP_038895444.1 (uncharacterized protein LOC120083676 [Benincasa hispida])

HSP 1 Score: 495.7 bits (1275), Expect = 3.2e-136
Identity = 253/318 (79.56%), Postives = 269/318 (84.59%), Query Frame = 0


Query: 37  MGEGQESKTKAQAGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAVEE 96
           MGEGQESKTKA+ GVEIQERGEI+FFYRPKVEKQE HS D+VQRLYIILRPESGEKAVEE
Sbjct: 1   MGEGQESKTKAEDGVEIQERGEIYFFYRPKVEKQEVHSPDEVQRLYIILRPESGEKAVEE 60

Query: 97  KQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRKSL 156
           KQ+                     SSS TGT+ G GTHTQEV+IEKQPLLRFIIMGRKSL
Sbjct: 61  KQS--------------------TSSSSTGTQRGQGTHTQEVNIEKQPLLRFIIMGRKSL 120

Query: 157 PHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILRHN 216
           PHPAQ++RPYWGFVDMVTTDVQD+K ALQG EYDTSTRGHR ISAARALGEGIYRILRHN
Sbjct: 121 PHPAQRARPYWGFVDMVTTDVQDIKNALQGGEYDTSTRGHRHISAARALGEGIYRILRHN 180

Query: 217 PHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGA-GSHYKR 276
           P     ++ YHTHLIYKLEFPS DEKNEPQ+ FNIEREGSF+IQIKNPDQ GA GSH KR
Sbjct: 181 P-----KNKYHTHLIYKLEFPSEDEKNEPQKWFNIEREGSFVIQIKNPDQGGAGGSHQKR 240

Query: 277 RAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCDTEECDLV 336
           RAQFPAHLQGQ G+K YHPADPPDYLNFEGCEFLLISASDDIEEELGLEL  + EECDLV
Sbjct: 241 RAQFPAHLQGQFGHKGYHPADPPDYLNFEGCEFLLISASDDIEEELGLELTTEGEECDLV 293

Query: 337 KTFGETASTQPLLKGTWV 354
           KTFGET  T+PL KGTWV
Sbjct: 301 KTFGETVPTEPLFKGTWV 293

[Close]

BLAST of Lcy01g000050 vs. NCBI nr
Match: KAG6581755.1 (hypothetical protein SDJN03_21757, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 456.1 bits (1172), Expect = 2.8e-124
Identity = 232/318 (72.96%), Postives = 254/318 (79.87%), Query Frame = 0


Query: 37  MGEGQESKTKAQAGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAVEE 96
           MGEG++SKT+A+AGVEIQERGEIFFFYRPKV KQ+ H  DDVQRLYIILRPESGE+AVEE
Sbjct: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60

Query: 97  KQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRKSL 156
           KQ PN+                                TQEV+IEKQPLLRF+IMGRKSL
Sbjct: 61  KQLPNASSR----------------------------RTQEVNIEKQPLLRFMIMGRKSL 120

Query: 157 PHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILRH- 216
           P+PAQK RPYWGFVDMVTT+VQDVK ALQ  EYD+STRGHR ISAARA+GEGIYR++RH 
Sbjct: 121 PNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHK 180

Query: 217 NPHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGAGSHYKR 276
            P  QK + +YHTHLIYKLEFPS DE+NEPQ SFNI REGSFLI IKNPD EG GS  KR
Sbjct: 181 QPDTQKSKKSYHTHLIYKLEFPSEDEENEPQNSFNIGREGSFLIMIKNPDVEGDGSRNKR 240

Query: 277 RAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCDTEECDLV 336
           RAQFPAHLQG+ G+ R+HPADPPDYLNFEGCEFLLISASDDIE+ELGLEL     ECDLV
Sbjct: 241 RAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTTAPHECDLV 290

Query: 337 KTFGETASTQPLLKGTWV 354
           KTFGET STQPLLKGTWV
Sbjct: 301 KTFGETTSTQPLLKGTWV 290

[Close]

BLAST of Lcy01g000050 vs. NCBI nr
Match: XP_022956009.1 (uncharacterized protein LOC111457833 isoform X1 [Cucurbita moschata])

HSP 1 Score: 454.9 bits (1169), Expect = 6.3e-124
Identity = 232/318 (72.96%), Postives = 253/318 (79.56%), Query Frame = 0


Query: 37  MGEGQESKTKAQAGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAVEE 96
           MGEG+ESKT+A+AGVEIQERGEIFFFYRPKV KQ+ H  DDVQRLYIILRPESGE+AVEE
Sbjct: 1   MGEGEESKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60

Query: 97  KQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRKSL 156
           KQ PN+                                TQEV+IEKQPLLRF+IMGRKSL
Sbjct: 61  KQLPNASSR----------------------------RTQEVNIEKQPLLRFMIMGRKSL 120

Query: 157 PHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILRH- 216
           P+PAQK RPYWGFVDMVTT+VQDVK ALQ  EYD+STRGHR ISAARA+GEGIYR++RH 
Sbjct: 121 PNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHK 180

Query: 217 NPHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGAGSHYKR 276
            P  QK + +YHTHLIYKLEFPS DE+NEPQ SFNI REGSFLI IKNPD EG GS  KR
Sbjct: 181 QPDTQKSKKSYHTHLIYKLEFPSEDEENEPQNSFNIGREGSFLIMIKNPDVEGDGSRNKR 240

Query: 277 RAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCDTEECDLV 336
           RAQFPAHLQG+ G+ R+HPADPPDYLNFEGCEFLLISASDDIE+ELGLEL     ECDLV
Sbjct: 241 RAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTTAPHECDLV 290

Query: 337 KTFGETASTQPLLKGTWV 354
           K FGET STQPLLKGTWV
Sbjct: 301 KMFGETTSTQPLLKGTWV 290

[Close]

BLAST of Lcy01g000050 vs. NCBI nr
Match: KAG7026195.1 (hypothetical protein SDJN02_12694, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 453.8 bits (1166), Expect = 1.4e-123
Identity = 231/318 (72.64%), Postives = 253/318 (79.56%), Query Frame = 0


Query: 37  MGEGQESKTKAQAGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAVEE 96
           MGEG++SKT+A+AGVEIQERGEIFFFYRPKV KQ+ H  DDVQRLYIILRPESGE+AVEE
Sbjct: 1   MGEGEDSKTRAEAGVEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGERAVEE 60

Query: 97  KQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRKSL 156
           KQ PN+                                TQEV+IEKQPLLRF+IMGRKSL
Sbjct: 61  KQLPNASSR----------------------------RTQEVNIEKQPLLRFMIMGRKSL 120

Query: 157 PHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILRH- 216
           P+PAQK RPYWGFVDMVTT+VQDVK ALQ  EYD+STRGHR ISAARA+GEGIYR++RH 
Sbjct: 121 PNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHRHISAARAVGEGIYRLVRHK 180

Query: 217 NPHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGAGSHYKR 276
            P  QK + +YHTHLIYKLEFPS DE+NEPQ SFNI REGSFLI IKNPD EG GS  KR
Sbjct: 181 QPDTQKSKKSYHTHLIYKLEFPSEDEENEPQNSFNIGREGSFLIMIKNPDVEGDGSRNKR 240

Query: 277 RAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCDTEECDLV 336
           RAQFPAHLQG+ G+ R+HPADPPDYLNFEGCEFLLISASDDIE+ELGLEL     ECDLV
Sbjct: 241 RAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLISASDDIEQELGLELTTAPHECDLV 290

Query: 337 KTFGETASTQPLLKGTWV 354
           K FGET STQPLLKGTWV
Sbjct: 301 KMFGETTSTQPLLKGTWV 290

[Close]

BLAST of Lcy01g000050 vs. NCBI nr
Match: XP_031740485.1 (uncharacterized protein LOC101213393 [Cucumis sativus] >KAE8649641.1 hypothetical protein Csa_012091 [Cucumis sativus])

HSP 1 Score: 449.1 bits (1154), Expect = 3.5e-122
Identity = 232/322 (72.05%), Postives = 261/322 (81.06%), Query Frame = 0


Query: 37  MGEGQES-KTKAQ-AGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAV 96
           MGEG+E  KTKA+   VEIQERGEIFF YRPKV KQE H  D+VQRLYIILRP+SGEK V
Sbjct: 1   MGEGEEELKTKAENHEVEIQERGEIFFLYRPKVGKQEVHGPDEVQRLYIILRPQSGEKTV 60

Query: 97  EEKQNPNSGKEGGLKKPLHSISGQGQSSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGRK 156
           EEKQ                            + GG  THTQEV+IE+QPLLRFIIMGRK
Sbjct: 61  EEKQ---------------------------CSYGGQSTHTQEVNIEEQPLLRFIIMGRK 120

Query: 157 SLPHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRILR 216
           SLPHP+ +SRPYWGFVDMVTT+VQD+KTALQGEEYDTSTRGHR ISAARALGEGIYRILR
Sbjct: 121 SLPHPSHRSRPYWGFVDMVTTNVQDIKTALQGEEYDTSTRGHRHISAARALGEGIYRILR 180

Query: 217 HNPHPQKFQSNYHTHLIYKLEFPSADEKNEPQQSFNIEREGSFLIQIKNPDQEGAG---S 276
           HNP  +   +N+HTHLIYKL+FP+ADEKNEPQ+SFNIEREGSF+IQIKNP+Q GAG   S
Sbjct: 181 HNPRNK--NNNHHTHLIYKLQFPAADEKNEPQKSFNIEREGSFVIQIKNPEQGGAGGSSS 240

Query: 277 HYKRRAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLELKCDTEE 336
            +KRRAQFPAHLQGQ G+KRY+PADPP++LNFEGCEFLLISASDDIE+ELGLEL  + EE
Sbjct: 241 QHKRRAQFPAHLQGQFGHKRYYPADPPEFLNFEGCEFLLISASDDIEQELGLELITEGEE 293

Query: 337 CDLVKTFGETASTQPLLKGTWV 354
           CDLVKTFG+  ST+PL +GTWV
Sbjct: 301 CDLVKTFGDAVSTKPLFEGTWV 293

[Close]

BLAST of Lcy01g000050 vs. TAIR 10
Match: AT1G16770.1 (unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 391.3 bits (1004), Expect = 8.0e-109
Identity = 206/331 (62.24%), Postives = 252/331 (76.13%), Query Frame = 0


Query: 37  MGEGQESKTKAQAGVEIQERGEIFFFYRPKVEKQEAHSHDDVQRLYIILRPESGEKAVEE 96
           MG+G+E KT+    VEIQERGEIFFFYRPKV K+EAHS DDVQRLYI++RPESGE   EE
Sbjct: 1   MGQGKEVKTRPDPQVEIQERGEIFFFYRPKVNKEEAHSVDDVQRLYIVMRPESGENPTEE 60

Query: 97  KQNPNSGKEGGLKKPLHSISGQGQ---SSSGTGTKGGHGTHTQEVDIEKQPLLRFIIMGR 156
           KQ+P SGKEG  K      SG G+   SSSG   +G  G   ++V+IEKQ LLRFI+MG+
Sbjct: 61  KQDPLSGKEGSDKD-----SGDGEASGSSSGAKNQGEGGHGVEKVNIEKQLLLRFIVMGK 120

Query: 157 KSLPHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISAARALGEGIYRIL 216
           KSLP P++KS+P+WGFV+MVTT+V+DVK AL+GEEY+T TRGHR    ARA+GEGIYRIL
Sbjct: 121 KSLPDPSKKSQPFWGFVEMVTTNVEDVKNALKGEEYETKTRGHRHKPPARAVGEGIYRIL 180

Query: 217 RHNPHPQKFQSNYHTHLIYKLEFPSADE--KNEPQQSFNIEREGSFLIQIKNPDQEGAGS 276
           RH P+P +    +HTHL+YKLEFPS  +  ++EPQ+S NIE EGSFLIQI+NP+Q G G 
Sbjct: 181 RHKPNPTR---KHHTHLVYKLEFPSVSQTREHEPQESLNIEPEGSFLIQIRNPEQGGGGR 240

Query: 277 ------HYKRRAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISASDDIEEELGLEL 336
                   KR+AQFP H+Q  +G+ R+ PADPPD+LN+EGCE LLISASDDIEEELG+EL
Sbjct: 241 SGFGGLQRKRKAQFPVHIQAHLGHTRFGPADPPDFLNYEGCELLLISASDDIEEELGMEL 300

Query: 337 --KCDTEE--CDLVKTFGETASTQPLLKGTW 353
             + D EE  CDL+KTFG+     PLL+GTW
Sbjct: 301 EPEGDGEESTCDLLKTFGDDVEATPLLRGTW 323

[Close]

BLAST of Lcy01g000050 vs. TAIR 10
Match: AT1G16770.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 103 Blast hits to 103 proteins in 50 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 65; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 320.1 bits (819), Expect = 2.3e-87
Identity = 170/283 (60.07%), Postives = 211/283 (74.56%), Query Frame = 0


Query: 85  LRPESGEKAVEEKQNPNSGKEGGLKKPLHSISGQGQ---SSSGTGTKGGHGTHTQEVDIE 144
           +RPESGE   EEKQ+P SGKEG  K      SG G+   SSSG   +G  G   ++V+IE
Sbjct: 1   MRPESGENPTEEKQDPLSGKEGSDKD-----SGDGEASGSSSGAKNQGEGGHGVEKVNIE 60

Query: 145 KQPLLRFIIMGRKSLPHPAQKSRPYWGFVDMVTTDVQDVKTALQGEEYDTSTRGHRRISA 204
           KQ LLRFI+MG+KSLP P++KS+P+WGFV+MVTT+V+DVK AL+GEEY+T TRGHR    
Sbjct: 61  KQLLLRFIVMGKKSLPDPSKKSQPFWGFVEMVTTNVEDVKNALKGEEYETKTRGHRHKPP 120

Query: 205 ARALGEGIYRILRHNPHPQKFQSNYHTHLIYKLEFPSADE--KNEPQQSFNIEREGSFLI 264
           ARA+GEGIYRILRH P+P +    +HTHL+YKLEFPS  +  ++EPQ+S NIE EGSFLI
Sbjct: 121 ARAVGEGIYRILRHKPNPTR---KHHTHLVYKLEFPSVSQTREHEPQESLNIEPEGSFLI 180

Query: 265 QIKNPDQEGAGS------HYKRRAQFPAHLQGQIGNKRYHPADPPDYLNFEGCEFLLISA 324
           QI+NP+Q G G         KR+AQFP H+Q  +G+ R+ PADPPD+LN+EGCE LLISA
Sbjct: 181 QIRNPEQGGGGRSGFGGLQRKRKAQFPVHIQAHLGHTRFGPADPPDFLNYEGCELLLISA 240

Query: 325 SDDIEEELGLEL--KCDTEE--CDLVKTFGETASTQPLLKGTW 353
           SDDIEEELG+EL  + D EE  CDL+KTFG+     PLL+GTW
Sbjct: 241 SDDIEEELGMELEPEGDGEESTCDLLKTFGDDVEATPLLRGTW 275

The following BLAST results are available for this feature:

BLAST of Lcy01g000050 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy01g000050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GXU8	3.0e-124	72.96	uncharacterized protein LOC111457833 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A5D3BUL8	4.9e-122	72.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B9M2	4.9e-122	72.67	uncharacterized protein LOC103487535 OS=Cucumis melo OX=3656 GN=LOC103487535 PE=...	[more]
A0A6J5UCV4	1.9e-118	69.82	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18607 PE=4 S...	[more]
A0A5E4GFE8	4.3e-118	69.82	PREDICTED: conserved OS=Prunus dulcis OX=3755 GN=ALMOND_2B029682 PE=4 SV=1	[more]

BLAST of Lcy01g000050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895444.1	3.2e-136	79.56	uncharacterized protein LOC120083676 [Benincasa hispida]	[more]
KAG6581755.1	2.8e-124	72.96	hypothetical protein SDJN03_21757, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022956009.1	6.3e-124	72.96	uncharacterized protein LOC111457833 isoform X1 [Cucurbita moschata]	[more]
KAG7026195.1	1.4e-123	72.64	hypothetical protein SDJN02_12694, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_031740485.1	3.5e-122	72.05	uncharacterized protein LOC101213393 [Cucumis sativus] >KAE8649641.1 hypothetica...	[more]

BLAST of Lcy01g000050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16770.1	8.0e-109	62.24	unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; B...	[more]
AT1G16770.2	2.3e-87	60.07	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..132
None	No IPR available	PANTHER	PTHR34776	F17F16.3 PROTEIN	coord: 37..352

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy01g000050.1	Lcy01g000050.1	mRNA