Lag0041733 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTCAATATGATTTTGCAGGACTTCACCGAAGCATGGAGCAAATGACCATGCAATTTGAGAAATTGGTTGCAAGGATCAAATCCATGGAGAAACAACCAACCTATCTTATCCAAAAGGAGAGATCTAATCCATTGCACCACAAGGAGTATTGGGAGGTAAAAGGAAAAGAATATGGTGGAAGATTCAAAGCTGTCCAACGGAGAAATTCAAGAGATATTCATAAAGTTGATCCCAACTTGAGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCGAAGGAGCACATTGAATGGGAAAGGCAAGTTGATCATTTTTTTGTTTGTTGCACTTTATGTGAGGAGAAAAAGGTAAAACTTATTGTTTCTCATCTTAGAGATTATGCGATTACTTGGTGGGATAAATTGTTTTTGAGTTCGAGGGACCTTGAACATCCAATAAATTCATGGAGTGATTTGAAGAAATTAGTGCGGGAACACTTTATTCCGGAGCTTTTCAATAACTTGCGGACTTTGAGACAAAAGAGCAAAAGTGTGGAGGCTTTCTACATGGAGATGCAAACATTGCTTGAGGAACTTGATCTTTACGAGGATTAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAAGAAGGAGATTGCCGCCCTACTTGATCTTCAACTTTATGGGGATTTAGACAAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTCTACAAGGTACACTAAACCTAAACCAATTTCCAATATTCATTCATCTTTGGAAAAGGTTAGTTTACCTATTAAAATACAACCTAATATTGAGGTAGAAAGTGGTGAAATTAAAATTTAAATGCAACCAACACATGTTAATGATTTCTTGTCTAGTAGGCAATTAGATTGCAAAGACTTGTTTGATTGTAACCCTTCTACTATTGCTATACCTACTCATGATGAAGTACATGTTGATGTGTGTGAGATAGGAAAAAAGTTCACAAAAGGCCAAGACAAAAGTATGTGAATTGATTGAAAAAGAATCTTGTGAGAAAATGAGTGAAAGAGAAAAGCATGAGATTAGTTTATGGCCTAAAGAGAAAAATTAGAGAAAAGCCAAGAATATGAGTTTTTGTGAAACAGTTTGTGAGGTTAAATCTATTTTGTTTCCAAAACAAAATATTTTTGATCTTTTATACAAAGGAACTTGTTTTCTCATTGGTGAGCTCAAACCATGGTTTTCTAGTGTTTCTCTTGAGTTCTTACAGGAAACTAAAATAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAGCACATGGACATCAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAAGTTGCTTCTAAGTTCATCCATGGCAGCACACATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAATACTATTGGAATGATCCTTGTTCTTTTCATAAGAAACCCAAGTGGAGATCCAAAGGTGGTTTACCAATCACATCCCACGACTACAAGATTGCTCTACAATGTCGTTGATTTTCGTCCATTTGATGTAGGAGACCCTTTTAATTTGAGGACAAATCCTCTTGAAGAAGGGGAGAATGATATGAATTCTACCAATAAAGAATTCAAATAGAGTCAAAGGTGTTGATTTCAGTTACTTTATGTGTAGAAGAGATTCAAGATGGAACACATTGAATGCACTTCGGGTTCATGAAAGCTGCATTTAATGCAAATTAAGCATCAATTAATGGAACTATACTTTAAGCTACTTCAAAGGTAAGCTTACTTAATTCATGGAATGTTACACAGAAAATGAAGGTTGACCAAGACTTCAATTCTCGGATTTATGGAGTCCATTATGTAATTTTTCAGTTTTTTGAGTCTTTTCAATTTTACTTAGGTTACTTTTGTTAGTTTCTCTTTAATACATTAAAGTTAGGAAGGTTACACATTTTAAGGTGACCTAGTGGTTGAATTTAGGTTATATTTTGGAGGCTATAAAAAGCCATCTTTGATAACCAAAAGTGGATTTATTAAGGCCTCGTTTGATAACCATTTGTTTTTTGGTTTTTGGTTTTTGAAAATTAAGCTTAAAAATACATGTTCCTACAAGTTTCTTTGTTTTGTTATTGATAACTGCCCAAAAGGTCTATCTAGGCCTCATTTATATAAGGATTTGTGTGTCTTTTATGCTTAGTAGGGTTGGTTTTAGAGAGATATTACATGATTTAACCCATTTGGAAGAATGGAAGCTTTGGAAATCACTATTTGCAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTATGCTGCAGCAAAACTGGGAACAGAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTTGTGATAAAGGATCAAGGAGAGCCTTACACGTGTCCTAG ATGTCTCAATATGATTTTGCAGGACTTCACCGAAGCATGGAGCAAATGACCATGCAATTTGAGAAATTGGTTGCAAGGATCAAATCCATGGAGAAACAACCAACCTATCTTATCCAAAAGGAGAGATCTAATCCATTGCACCACAAGGAGTATTGGGAGGTAAAAGGAAAAGAATATGGTGGAAGATTCAAAGCTGTCCAACGGAGAAATTCAAGAGATATTCATAAAGTTGATCCCAACTTGAGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCGAAGGAGCACATTGAATGGGAAAGGCAAGTTGATCATTTTTTTGTTTGTTGCACTTTATGTGAGGAGAAAAAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAAGAAGGAGATTGCCGCCCTACTTGATCTTCAACTTTATGGGGATTTAGACAAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTCTACAAGGTACACTAAACCTAAACCAATTTCCAATATTCATTCATCTTTGGAAAAGGAAACTAAAATAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAGCACATGGACATCAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAAGTTGCTTCTAAGTTCATCCATGGCAGCACACATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAATACTATTGGAATGATCCTTGTTCTTTTCATAAGAAACCCAAGTGGAGATCCAAAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTATGCTGCAGCAAAACTGGGAACAGAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTTGTGATAAAGGATCAAGGAGAGCCTTACACGTGTCCTAG ATGTCTCAATATGATTTTGCAGGACTTCACCGAAGCATGGAGCAAATGACCATGCAATTTGAGAAATTGGTTGCAAGGATCAAATCCATGGAGAAACAACCAACCTATCTTATCCAAAAGGAGAGATCTAATCCATTGCACCACAAGGAGTATTGGGAGGTAAAAGGAAAAGAATATGGTGGAAGATTCAAAGCTGTCCAACGGAGAAATTCAAGAGATATTCATAAAGTTGATCCCAACTTGAGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCGAAGGAGCACATTGAATGGGAAAGGCAAGTTGATCATTTTTTTGTTTGTTGCACTTTATGTGAGGAGAAAAAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAAGAAGGAGATTGCCGCCCTACTTGATCTTCAACTTTATGGGGATTTAGACAAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTCTACAAGGTACACTAAACCTAAACCAATTTCCAATATTCATTCATCTTTGGAAAAGGAAACTAAAATAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAGCACATGGACATCAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAAGTTGCTTCTAAGTTCATCCATGGCAGCACACATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAATACTATTGGAATGATCCTTGTTCTTTTCATAAGAAACCCAAGTGGAGATCCAAAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTATGCTGCAGCAAAACTGGGAACAGAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTTGTGATAAAGGATCAAGGAGAGCCTTACACGTGTCCTAG MSQYDFAGLHRSMEQMTMQFEKLVARIKSMEKQPTYLIQKERSNPLHHKEYWEVKGKEYGGRFKAVQRRNSRDIHKVDPNLSMKPKLPKFYGSTNSKEHIEWERQVDHFFVCCTLCEEKKMTTMARFFRGLKKEIAALLDLQLYGDLDKMVNLAIKIEKHLQRKSTRYTKPKPISNIHSSLEKETKIIIEKLDSKFPSKVNNGNQHMDINANAFLERQNSKVASKFIHGSTHKVFKPGDWVWKYYWNDPCSFHKKPKWRSKDYAAERLEGANSMLQQNWEQKLPHHSSLANFMNRLLLSYFCDKGSRRALHVS Homology
BLAST of Lag0041733 vs. NCBI nr
Match: XP_022159097.1 (uncharacterized protein LOC111025539 [Momordica charantia]) HSP 1 Score: 85.1 bits (209), Expect = 1.2e-12 Identity = 71/254 (27.95%), Postives = 118/254 (46.46%), Query Frame = 0
BLAST of Lag0041733 vs. NCBI nr
Match: KAA0038045.1 (uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa] >TYK20558.1 uncharacterized protein E5676_scaffold237G001470 [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-12 Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 0
BLAST of Lag0041733 vs. NCBI nr
Match: RVW44855.1 (hypothetical protein CK203_087056 [Vitis vinifera]) HSP 1 Score: 77.0 bits (188), Expect = 3.2e-10 Identity = 48/162 (29.63%), Postives = 88/162 (54.32%), Query Frame = 0
BLAST of Lag0041733 vs. NCBI nr
Match: XP_038887118.1 (uncharacterized protein K02A2.6-like [Benincasa hispida]) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-08 Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0
BLAST of Lag0041733 vs. NCBI nr
Match: KAG2411297.1 (hypothetical protein I3760_Q013700, partial [Carya illinoinensis]) HSP 1 Score: 70.9 bits (172), Expect = 2.3e-08 Identity = 52/170 (30.59%), Postives = 78/170 (45.88%), Query Frame = 0
BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A6J1DYV9 (uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025539 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 5.6e-13 Identity = 71/254 (27.95%), Postives = 118/254 (46.46%), Query Frame = 0
BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A5A7T993 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001470 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 7.3e-13 Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 0
BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A438EAM1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_087056 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10 Identity = 48/162 (29.63%), Postives = 88/162 (54.32%), Query Frame = 0
BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A2N9EHJ5 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2070 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.4e-10 Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 0
BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A2N9ERD4 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5274 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 9.9e-10 Identity = 50/168 (29.76%), Postives = 86/168 (51.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|