Lag0041733 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0041733
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotrans_gag domain-containing protein
Locationchr13: 25664600 .. 25667053 (-)
RNA-Seq ExpressionLag0041733
SyntenyLag0041733
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTCAATATGATTTTGCAGGACTTCACCGAAGCATGGAGCAAATGACCATGCAATTTGAGAAATTGGTTGCAAGGATCAAATCCATGGAGAAACAACCAACCTATCTTATCCAAAAGGAGAGATCTAATCCATTGCACCACAAGGAGTATTGGGAGGTAAAAGGAAAAGAATATGGTGGAAGATTCAAAGCTGTCCAACGGAGAAATTCAAGAGATATTCATAAAGTTGATCCCAACTTGAGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCGAAGGAGCACATTGAATGGGAAAGGCAAGTTGATCATTTTTTTGTTTGTTGCACTTTATGTGAGGAGAAAAAGGTAAAACTTATTGTTTCTCATCTTAGAGATTATGCGATTACTTGGTGGGATAAATTGTTTTTGAGTTCGAGGGACCTTGAACATCCAATAAATTCATGGAGTGATTTGAAGAAATTAGTGCGGGAACACTTTATTCCGGAGCTTTTCAATAACTTGCGGACTTTGAGACAAAAGAGCAAAAGTGTGGAGGCTTTCTACATGGAGATGCAAACATTGCTTGAGGAACTTGATCTTTACGAGGATTAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAAGAAGGAGATTGCCGCCCTACTTGATCTTCAACTTTATGGGGATTTAGACAAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTCTACAAGGTACACTAAACCTAAACCAATTTCCAATATTCATTCATCTTTGGAAAAGGTTAGTTTACCTATTAAAATACAACCTAATATTGAGGTAGAAAGTGGTGAAATTAAAATTTAAATGCAACCAACACATGTTAATGATTTCTTGTCTAGTAGGCAATTAGATTGCAAAGACTTGTTTGATTGTAACCCTTCTACTATTGCTATACCTACTCATGATGAAGTACATGTTGATGTGTGTGAGATAGGAAAAAAGTTCACAAAAGGCCAAGACAAAAGTATGTGAATTGATTGAAAAAGAATCTTGTGAGAAAATGAGTGAAAGAGAAAAGCATGAGATTAGTTTATGGCCTAAAGAGAAAAATTAGAGAAAAGCCAAGAATATGAGTTTTTGTGAAACAGTTTGTGAGGTTAAATCTATTTTGTTTCCAAAACAAAATATTTTTGATCTTTTATACAAAGGAACTTGTTTTCTCATTGGTGAGCTCAAACCATGGTTTTCTAGTGTTTCTCTTGAGTTCTTACAGGAAACTAAAATAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAGCACATGGACATCAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAAGTTGCTTCTAAGTTCATCCATGGCAGCACACATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAATACTATTGGAATGATCCTTGTTCTTTTCATAAGAAACCCAAGTGGAGATCCAAAGGTGGTTTACCAATCACATCCCACGACTACAAGATTGCTCTACAATGTCGTTGATTTTCGTCCATTTGATGTAGGAGACCCTTTTAATTTGAGGACAAATCCTCTTGAAGAAGGGGAGAATGATATGAATTCTACCAATAAAGAATTCAAATAGAGTCAAAGGTGTTGATTTCAGTTACTTTATGTGTAGAAGAGATTCAAGATGGAACACATTGAATGCACTTCGGGTTCATGAAAGCTGCATTTAATGCAAATTAAGCATCAATTAATGGAACTATACTTTAAGCTACTTCAAAGGTAAGCTTACTTAATTCATGGAATGTTACACAGAAAATGAAGGTTGACCAAGACTTCAATTCTCGGATTTATGGAGTCCATTATGTAATTTTTCAGTTTTTTGAGTCTTTTCAATTTTACTTAGGTTACTTTTGTTAGTTTCTCTTTAATACATTAAAGTTAGGAAGGTTACACATTTTAAGGTGACCTAGTGGTTGAATTTAGGTTATATTTTGGAGGCTATAAAAAGCCATCTTTGATAACCAAAAGTGGATTTATTAAGGCCTCGTTTGATAACCATTTGTTTTTTGGTTTTTGGTTTTTGAAAATTAAGCTTAAAAATACATGTTCCTACAAGTTTCTTTGTTTTGTTATTGATAACTGCCCAAAAGGTCTATCTAGGCCTCATTTATATAAGGATTTGTGTGTCTTTTATGCTTAGTAGGGTTGGTTTTAGAGAGATATTACATGATTTAACCCATTTGGAAGAATGGAAGCTTTGGAAATCACTATTTGCAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTATGCTGCAGCAAAACTGGGAACAGAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTTGTGATAAAGGATCAAGGAGAGCCTTACACGTGTCCTAG

mRNA sequence

ATGTCTCAATATGATTTTGCAGGACTTCACCGAAGCATGGAGCAAATGACCATGCAATTTGAGAAATTGGTTGCAAGGATCAAATCCATGGAGAAACAACCAACCTATCTTATCCAAAAGGAGAGATCTAATCCATTGCACCACAAGGAGTATTGGGAGGTAAAAGGAAAAGAATATGGTGGAAGATTCAAAGCTGTCCAACGGAGAAATTCAAGAGATATTCATAAAGTTGATCCCAACTTGAGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCGAAGGAGCACATTGAATGGGAAAGGCAAGTTGATCATTTTTTTGTTTGTTGCACTTTATGTGAGGAGAAAAAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAAGAAGGAGATTGCCGCCCTACTTGATCTTCAACTTTATGGGGATTTAGACAAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTCTACAAGGTACACTAAACCTAAACCAATTTCCAATATTCATTCATCTTTGGAAAAGGAAACTAAAATAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAGCACATGGACATCAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAAGTTGCTTCTAAGTTCATCCATGGCAGCACACATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAATACTATTGGAATGATCCTTGTTCTTTTCATAAGAAACCCAAGTGGAGATCCAAAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTATGCTGCAGCAAAACTGGGAACAGAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTTGTGATAAAGGATCAAGGAGAGCCTTACACGTGTCCTAG

Coding sequence (CDS)

ATGTCTCAATATGATTTTGCAGGACTTCACCGAAGCATGGAGCAAATGACCATGCAATTTGAGAAATTGGTTGCAAGGATCAAATCCATGGAGAAACAACCAACCTATCTTATCCAAAAGGAGAGATCTAATCCATTGCACCACAAGGAGTATTGGGAGGTAAAAGGAAAAGAATATGGTGGAAGATTCAAAGCTGTCCAACGGAGAAATTCAAGAGATATTCATAAAGTTGATCCCAACTTGAGCATGAAGCCTAAACTTCCTAAATTCTATGGAAGTACAAACTCGAAGGAGCACATTGAATGGGAAAGGCAAGTTGATCATTTTTTTGTTTGTTGCACTTTATGTGAGGAGAAAAAGATGACTACCATGGCTCGTTTCTTTAGAGGACTTAAGAAGGAGATTGCCGCCCTACTTGATCTTCAACTTTATGGGGATTTAGACAAGATGGTGAACTTAGCCATAAAGATTGAAAAACATCTCCAAAGGAAGTCTACAAGGTACACTAAACCTAAACCAATTTCCAATATTCATTCATCTTTGGAAAAGGAAACTAAAATAATCATTGAGAAGCTTGATTCAAAGTTCCCTTCTAAAGTCAACAATGGCAACCAGCACATGGACATCAATGCCAATGCATTTCTTGAGAGGCAAAACTCCAAAGTTGCTTCTAAGTTCATCCATGGCAGCACACATAAGGTGTTCAAACCGGGTGATTGGGTTTGGAAATACTATTGGAATGATCCTTGTTCTTTTCATAAGAAACCCAAGTGGAGATCCAAAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTATGCTGCAGCAAAACTGGGAACAGAAACTGCCACATCACAGCTCGTTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTTGTGATAAAGGATCAAGGAGAGCCTTACACGTGTCCTAG

Protein sequence

MSQYDFAGLHRSMEQMTMQFEKLVARIKSMEKQPTYLIQKERSNPLHHKEYWEVKGKEYGGRFKAVQRRNSRDIHKVDPNLSMKPKLPKFYGSTNSKEHIEWERQVDHFFVCCTLCEEKKMTTMARFFRGLKKEIAALLDLQLYGDLDKMVNLAIKIEKHLQRKSTRYTKPKPISNIHSSLEKETKIIIEKLDSKFPSKVNNGNQHMDINANAFLERQNSKVASKFIHGSTHKVFKPGDWVWKYYWNDPCSFHKKPKWRSKDYAAERLEGANSMLQQNWEQKLPHHSSLANFMNRLLLSYFCDKGSRRALHVS
Homology
BLAST of Lag0041733 vs. NCBI nr
Match: XP_022159097.1 (uncharacterized protein LOC111025539 [Momordica charantia])

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-12
Identity = 71/254 (27.95%), Postives = 118/254 (46.46%), Query Frame = 0

Query: 10  HRSMEQMTMQFEKLVARIK-------SMEKQPTYLIQKERSNPLHHKE---------YWE 69
           +R +E M  Q E+L+AR+        +  +QP  ++++E       ++           E
Sbjct: 10  NRDVEGMEPQ-EQLLARVMQNVETMINERRQPEEVLEEEEDLGQEDEDEEPEVAVPRRGE 69

Query: 70  VKGKEYGGRFKAVQRRNSRDIHKVDPNL-SMKPKLPKFYGSTNSKEHIEWERQVDHFFVC 129
            +G    G F+  +++  R+ + VD    ++K K PKF+G++NS++++EWE++ +H F  
Sbjct: 70  RRGVRGRGGFQNRRQQGRREDNHVDRGFGNIKVKFPKFHGTSNSEDYLEWEQKAEHIFYG 129

Query: 130 CTLCEEKK--------------------------------------------------MT 189
             L EEKK                                                    
Sbjct: 130 NNLTEEKKELMRRRFIPPHFLRDCAQKLQALRQGNKSVEEYYKKMETLMERVDIDENEEN 189

Query: 190 TMARFFRGLKKEIAALLDLQLYGDLDKMVNLAIKIEKHLQRKSTRYTKPKPISNIHSSLE 197
           TMARF  GL  E+A  +DLQ+Y D++++V+ ++KIEK +QR+ +RY   KP SN  SS +
Sbjct: 190 TMARFINGLNIEVAYRVDLQMYEDMEELVHFSVKIEKQIQRRKSRYATKKPFSNSTSSWK 249

BLAST of Lag0041733 vs. NCBI nr
Match: KAA0038045.1 (uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa] >TYK20558.1 uncharacterized protein E5676_scaffold237G001470 [Cucumis melo var. makuwa])

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-12
Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 0

Query: 54  VKGKEYGGRFKAVQRRNSRDIHKVDPNL-SMKPKLPKFYGSTNSKEHIEWERQVDHFFVC 113
           V+ K  G  ++ +QRR  ++  + + N+ ++K K+ KF+G T+ +E+I+WE++V++ F C
Sbjct: 45  VRRKGRGRAYQNIQRRAQQEAPQFERNIEAIKFKISKFFGKTDPEEYIQWEKEVENVFAC 104

Query: 114 CTLCEEKKM--------------------------------------------------- 173
                E+K+                                                   
Sbjct: 105 HNFTNEQKVRFCVFKFKDYAQTRDMTQKFQALRQGNKSVEDYYNEMDTLIDRLDLDEEME 164

Query: 174 TTMARFFRGLKKEIAALLDLQLYGDLDKMVNLAIKIEKHLQRKSTRYTKPKPISNIHSSL 187
           T MA+F  GL KEI   +DLQ Y D+++M++LAIK+EK    + TRY   KP S+ +SS 
Sbjct: 165 TIMAQFLNGLNKEIVDKVDLQPYSDIEEMLHLAIKVEKQFSTRITRYNSYKPSSSFNSSW 224

BLAST of Lag0041733 vs. NCBI nr
Match: RVW44855.1 (hypothetical protein CK203_087056 [Vitis vinifera])

HSP 1 Score: 77.0 bits (188), Expect = 3.2e-10
Identity = 48/162 (29.63%), Postives = 88/162 (54.32%), Query Frame = 0

Query: 46  LHHKEYWEVKGKEYGGRFKAVQRRNSRDIHKVDPNL-SMKPKLPKFYGSTNSKEHIEWER 105
           L+H+  + ++G+  G  F+   R       + D NL ++K K+P F G  + + ++EWE+
Sbjct: 73  LNHENRFVLRGERCGRGFRIAPRWQD----ETDRNLGNIKMKIPSFQGKNDPEVYLEWEK 132

Query: 106 QVDHFFVCCTLCEEKK---------------MTTMARFFRGLKKEIAALLDLQLYGDLDK 165
            V+  F C    EEKK                 TM RF  GL ++IA +++LQ Y +L+ 
Sbjct: 133 NVEFIFECHNYSEEKKEMKIAMIRANVEEDREATMTRFPNGLNRDIANVVELQHYVELED 192

Query: 166 MVNLAIKIEKHLQRKSTR-YTKPKPISNIHSSLEKETKIIIE 191
           MV++AIK+E+ L++K TR +  P   ++   ++ K+ +++ +
Sbjct: 193 MVHMAIKVERRLKKKGTRSFQNPDSSASWKPNVRKDEEVVFK 230

BLAST of Lag0041733 vs. NCBI nr
Match: XP_038887118.1 (uncharacterized protein K02A2.6-like [Benincasa hispida])

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-08
Identity = 43/102 (42.16%), Postives = 61/102 (59.80%), Query Frame = 0

Query: 117 EEKKMTTMARFFRGLKKEIAALLDLQLYGDLDKMVNLAIKIEKHLQRKSTRYTKPKPISN 176
           +E   T MARF  GL KEIA  +DLQ Y D+++M++LAIK+EKHL  K  RYT  KP S+
Sbjct: 126 DEDMETLMARFLNGLNKEIADKVDLQPYFDIEEMLHLAIKVEKHLSTKRARYTSSKPSSS 185

Query: 177 IHSSLEKETKIIIEKLDSKFPSKVNNGNQHMDINANAFLERQ 219
           ++SS + E +       S F S+     ++     NAF+ R+
Sbjct: 186 LNSSWKNENR-------SDFRSRDKFVKENSKEKGNAFVTRR 220

BLAST of Lag0041733 vs. NCBI nr
Match: KAG2411297.1 (hypothetical protein I3760_Q013700, partial [Carya illinoinensis])

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-08
Identity = 52/170 (30.59%), Postives = 78/170 (45.88%), Query Frame = 0

Query: 56  GKEYGGRFKAVQRRNSRDIHKVDPNL-SMKPKLPKFYGSTNSKEHIEWERQVDHFFVCCT 115
           G+  G R +   RRN R    VD +L S+K K+P F G T+ + ++EWE++++  F C  
Sbjct: 52  GRHRGVRRERGFRRNPRGRDGVDRDLESIKMKIPSFQGRTDPEAYLEWEKKIELIFECHN 111

Query: 116 LCEEKKM----------------------------------------------------- 170
             EEKKM                                                     
Sbjct: 112 YSEEKKMKLAVIEFTDYAIIWWDQLVTNRRRNYERGSRSVEDYHKEMEVAMIRANVEEDR 171

BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A6J1DYV9 (uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025539 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 5.6e-13
Identity = 71/254 (27.95%), Postives = 118/254 (46.46%), Query Frame = 0

Query: 10  HRSMEQMTMQFEKLVARIK-------SMEKQPTYLIQKERSNPLHHKE---------YWE 69
           +R +E M  Q E+L+AR+        +  +QP  ++++E       ++           E
Sbjct: 10  NRDVEGMEPQ-EQLLARVMQNVETMINERRQPEEVLEEEEDLGQEDEDEEPEVAVPRRGE 69

Query: 70  VKGKEYGGRFKAVQRRNSRDIHKVDPNL-SMKPKLPKFYGSTNSKEHIEWERQVDHFFVC 129
            +G    G F+  +++  R+ + VD    ++K K PKF+G++NS++++EWE++ +H F  
Sbjct: 70  RRGVRGRGGFQNRRQQGRREDNHVDRGFGNIKVKFPKFHGTSNSEDYLEWEQKAEHIFYG 129

Query: 130 CTLCEEKK--------------------------------------------------MT 189
             L EEKK                                                    
Sbjct: 130 NNLTEEKKELMRRRFIPPHFLRDCAQKLQALRQGNKSVEEYYKKMETLMERVDIDENEEN 189

Query: 190 TMARFFRGLKKEIAALLDLQLYGDLDKMVNLAIKIEKHLQRKSTRYTKPKPISNIHSSLE 197
           TMARF  GL  E+A  +DLQ+Y D++++V+ ++KIEK +QR+ +RY   KP SN  SS +
Sbjct: 190 TMARFINGLNIEVAYRVDLQMYEDMEELVHFSVKIEKQIQRRKSRYATKKPFSNSTSSWK 249

BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A5A7T993 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001470 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 7.3e-13
Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 0

Query: 54  VKGKEYGGRFKAVQRRNSRDIHKVDPNL-SMKPKLPKFYGSTNSKEHIEWERQVDHFFVC 113
           V+ K  G  ++ +QRR  ++  + + N+ ++K K+ KF+G T+ +E+I+WE++V++ F C
Sbjct: 45  VRRKGRGRAYQNIQRRAQQEAPQFERNIEAIKFKISKFFGKTDPEEYIQWEKEVENVFAC 104

Query: 114 CTLCEEKKM--------------------------------------------------- 173
                E+K+                                                   
Sbjct: 105 HNFTNEQKVRFCVFKFKDYAQTRDMTQKFQALRQGNKSVEDYYNEMDTLIDRLDLDEEME 164

Query: 174 TTMARFFRGLKKEIAALLDLQLYGDLDKMVNLAIKIEKHLQRKSTRYTKPKPISNIHSSL 187
           T MA+F  GL KEI   +DLQ Y D+++M++LAIK+EK    + TRY   KP S+ +SS 
Sbjct: 165 TIMAQFLNGLNKEIVDKVDLQPYSDIEEMLHLAIKVEKQFSTRITRYNSYKPSSSFNSSW 224

BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A438EAM1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_087056 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10
Identity = 48/162 (29.63%), Postives = 88/162 (54.32%), Query Frame = 0

Query: 46  LHHKEYWEVKGKEYGGRFKAVQRRNSRDIHKVDPNL-SMKPKLPKFYGSTNSKEHIEWER 105
           L+H+  + ++G+  G  F+   R       + D NL ++K K+P F G  + + ++EWE+
Sbjct: 73  LNHENRFVLRGERCGRGFRIAPRWQD----ETDRNLGNIKMKIPSFQGKNDPEVYLEWEK 132

Query: 106 QVDHFFVCCTLCEEKK---------------MTTMARFFRGLKKEIAALLDLQLYGDLDK 165
            V+  F C    EEKK                 TM RF  GL ++IA +++LQ Y +L+ 
Sbjct: 133 NVEFIFECHNYSEEKKEMKIAMIRANVEEDREATMTRFPNGLNRDIANVVELQHYVELED 192

Query: 166 MVNLAIKIEKHLQRKSTR-YTKPKPISNIHSSLEKETKIIIE 191
           MV++AIK+E+ L++K TR +  P   ++   ++ K+ +++ +
Sbjct: 193 MVHMAIKVERRLKKKGTRSFQNPDSSASWKPNVRKDEEVVFK 230

BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A2N9EHJ5 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2070 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.4e-10
Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 0

Query: 67  QRRNSRDIHKVDPNL-SMKPKLPKFYGSTNSKEHIEWERQVDHFFVCCTLCEEKKM---- 126
           + R  RD   +D NL S+K K+P F G TN + ++EWE+++D  F C    EEKK+    
Sbjct: 492 ENRGGRD--GLDQNLGSIKMKIPSFQGRTNPEVYLEWEKKIDLVFDCHNYSEEKKVKLAG 551

Query: 127 -------------------------TTMARFFRGLKKEIAALLDLQLYGDLDKMVNLAIK 170
                                     TMARF  GL ++IA +++LQ Y +++ MV++A+K
Sbjct: 552 SRSVEDYHKEMEVAMIRANVEEDREATMARFLSGLNRDIANVIELQHYVEIEDMVHMAMK 611

BLAST of Lag0041733 vs. ExPASy TrEMBL
Match: A0A2N9ERD4 (Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5274 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.9e-10
Identity = 50/168 (29.76%), Postives = 86/168 (51.19%), Query Frame = 0

Query: 38  IQKERSNPLHHKEYWEVKGKEYGGRFKAVQRRNSRDIHK-----VDPNL-SMKPKLPKFY 97
           ++ E  N    ++  ++  +   GR +  +R    + ++     +D NL S+K K+P F 
Sbjct: 64  VENEYENEGDGEDEEDLASEVGSGRHRRFRRERGHEGNRGGRDGLDRNLGSIKMKIPSFQ 123

Query: 98  GSTNSKEHIEWERQVDHFFVCCTLCEEKKM-----------------------------T 157
           G TN + ++EWE+++D  F C    EEKK+                              
Sbjct: 124 GRTNPEVYLEWEKKIDLVFDCHNYSEEKKVKLAGSRSVEDYHKEMEVAMIRANVEEDREA 183

Query: 158 TMARFFRGLKKEIAALLDLQLYGDLDKMVNLAIKIEKHLQRKST-RYT 170
           TMARF  GL ++IA +++LQ Y +++ MV++A+K+E+ L+RK T RYT
Sbjct: 184 TMARFLSGLNRDIANVIELQHYVEIEDMVHMAMKVERQLKRKGTARYT 231

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022159097.11.2e-1227.95uncharacterized protein LOC111025539 [Momordica charantia][more]
KAA0038045.11.5e-1229.19uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa] >TYK2... [more]
RVW44855.13.2e-1029.63hypothetical protein CK203_087056 [Vitis vinifera][more]
XP_038887118.11.0e-0842.16uncharacterized protein K02A2.6-like [Benincasa hispida][more]
KAG2411297.12.3e-0830.59hypothetical protein I3760_Q013700, partial [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DYV95.6e-1327.95uncharacterized protein LOC111025539 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A5A7T9937.3e-1329.19Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A438EAM11.5e-1029.63Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_087056 PE=4 SV=1[more]
A0A2N9EHJ53.4e-1035.82Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9ERD49.9e-1029.76Ribonuclease H OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5274 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 13..33
NoneNo IPR availablePANTHERPTHR35046ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 116..207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0041733.1Lag0041733.1mRNA