Lag0041682 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041682
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chr13: 23862724 .. 23873878 (+)
RNA-Seq Expression	Lag0041682
Synteny	Lag0041682

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGATTCAGTTAGTGGTGGTGATGCGCTTGGTTCGACACCCAATGAGGCACGAGAGATCAGTACAAACCTGACAGAAAACACTCAGTTCCATGCCACTTCCCATGATGAGCTAGAATGCCAAATTTCAAGCAGTAGCAGGTAGGTGCATTAAAAGAAAATCTCATCAAGGTCAGTGAGCTTGAACTTAATTCTTCCTGTTATTATGAGCCTAGTTCATGTAATATCTCATGCAAGTTAGGAGAGTTGGAGATTGAGAAAAATTCATATCATTCCATGCCTATTCTTTTTCTCCTAAGAATTATAATTCTAAAGGCATGATTTAGGCTTAGTAATTCAAATACCTGACCTCCTTGCTATTAGGCTCAGATGGTATTTAAATAATATGTTTGGAAAGGTTGAAGATTTCTTGATTAAAATTTCTTATGTTGTGCACCCTGTGTGCAAGATGAGCCTTTCTATGCAGGAATTGAAGAAGAAGAAAGATCCTCTTAGGATCAAAGAGGTGGACTTCGGTTGAAAGCACCGAATCCCGTCTAGCTGAGACGTTAAAATAAGCGCTTCTTGGGAGGCAACCCAAGCTTTTACAGTTTGTTGTAGATTTCATTTTAGTTTTTGCGTTGATCCTAATGCTCCCTTGAGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATAGTCTGATGTCAAAGATGGTGGGCGGTAGTCTGAGATCGTGGAGGTCATAATAAAAGGAAAAAAGGAAAGAAATAACACAAATAATAAAAAAATGAAAGAAAAAGAAATAACAAAAAAAAAACAAAAAAAAAACGGAAAGAGAACGAAATAACGAAAAAAGATTAAAAAAAATGACGAGGAAGTGGTTAAAAAAAATAGTGGAAGAGAAGAGATTGGTGTAGGAGTGGGAGGGAGAGATGGATACATGCATGAAAGATAGAGAAAAAAAAAACAGAAACAGAATTTGAGAAACAACATTTTGTAGTTTCTCAAATTTGGCCTCTTTTTTAGAAACGTTTCTAGAAATTTAGAAACAAGAAACAGGGATGAGTTATCAAACAAGTCTGTTTCTTAAAAAGGAGAAACGGGAACAAGAAAAAGAAAACGGGAACGTTATCAAACCAGCCCTTAGCTATTCATAATCAAAATATAATCATAAAATCGTATGCTAAATTCCATAAAAGAAATGGTAAAAAAATCAAGATAAAGGAGAAGGATAAATATTGTCGTGTCGATTTTCTATTCCCAGCTCAATCGCCACGATTTCAAGCTTGAAGATTCCCTTTTCTTAGCCTTCTAACTTTGCCTTCCAATTTGGTAAGAAAGTGTAAACTAGTAACTTTTCTTTTCAAAAGAATCTATCCATGGCGCAAAATAAACCCTACTTTATGTAGTAAAAAATAAATGCACGACATTGCTGAGACGCTACAAATAGCATCGAGAAGCTATCTCGACCTCGACACTTGATTTTCTTCTTTTTTTCCTCACACAATTTCTTCTATTTGTGTCCACTCTTATTCTCATTTTCTTGATAATTTCTTTAAATTTTTCGTTTTACTCCAAATGCTCGAATTCCACAAAATACACAAATACGTACATGAAAATAGTCATTTAATAATCAAGCCCGAGAAATAGCTAATTATGTACAGTATCATAAATCAAAAATATCAATGGCTTATCATGCTTATTATTAAACCGGGTTTATAAATATTCAATATTTAATAAGAGTTAAACTCTTTGTTCTTGAAAATGTTCAAAAGAGTTAAGTTACAAAGGTCTGATTTAATCAACTATTAATCTAATTTACTTTCGTTCATTTAAATTATGTTATTTAGTAGTAATCACTCTAAAAGAATGGTTTCTTTACCTTAGATGTTGTGTAAGGACCCGACTAAAAGGAAGTTAAAAACATGCTGAGGGTCGCTACTACAGGCATGAAAACGTAAAATTTTTGAAACTTTAAAACAGAAGTAACTATAAGTAAAAATCTTTTATATAATAAACTAGGCCCAAAAGCACAAGACATTTACATTAAACAATTAGTCAAAAATGATGATAGACAAATTTTATAAAATTGAACGTTTAGAACATCTGAAAATATGGAACTAGGAATCTCGATCCTGGACTTCTAGGGACATGATTTGCAGTTGCATCCCATAGCCTAGCCAAGTCACTGTCATCGCCACTCGTCTGATGTCATCAAGTACCACCTGAAAATGAAAGTTATGTAGCATGGGTGAGTATATAAGAATATACTCAACACTTAAGGACTGAAGCTGAAAGTATGAGATCCAATGTCATGAAGTCTAATAGCATGAAACTTGATTCTGGGTCTTAACATCATAGGGACCAAACTGGAATCATTCATTCGGGTTTCTAACCCTAGGACCATAACCGAGTACATGAGACATTCTGCCTAGGGTGTTTACCTATCCCCAACCTGTGCCAACTAGAGTGTTGTGTGGGTCGATCGGTTGAGGCAAGTAAACTAGAGGCTAACTGGCAACCTCTAGCAGAACTACACCTATCCCAACACAACACCCCTGAAATATGAAAACATGTCTGTGTTCCATCTAGCGCACGAATAACATGCCTGATCGTAAGCTCAACACCGTCCTGAAATGAGAGAGCGCAAGATAACGTGCTTGAAACTGTGCTCTAACAGTCAACTGATAGAACGCACGATACTGTGCTTGGCAACTGAGTTATACCAGTCCTGAGATGGGAAAGGGAAAGTCACTCTAGCTAACGTAAGACTTAAGGATTCTTTAAGTCTATCTGAGGTCCTAAAATATGATTAAGGTCCCTATTCTAAGTTTATTCTCAATCATACATGGTTCTCTAAAAGGTGTATTAAAACGTGCATGGAGAACCCATTGTAACGCTCGTATTTTAAGATAAAATTCAAATTTCCTAAGTTGGAATTAATTTTGAGTTAAGAGGGAATTTTGAAAATTTGAAAACTTGCTGAAATATTTAAATTTTGGGGTTGAGTGACATTTTAGTAATTTGTTGAAATTAGAGCCAAGCCTAAGCCCATTAGGTTTTAAGTAGCCAGCACGTAACCCTAGGGAGTCAAAAATCAGCCATCTTCTTCTCTTTCTCACAAGTTCAGTCGCCTAGGAGGTCTTCACCACGATTTGCAGCTGCCAGTCACGAGCTCCGATGTCACCTACGTACTCCAGCCAACAGCAAACCTCACGGCGGCGCGTTCTCTCCGGCGAGTCCTGACGGTGCAGCGACATCTGCAGACAGCGTGAGGGTGCGAGCTTAACTGCAGTTTCGGGCGTGGGTCTCCTTCTTCTCTAGTGCGCAGGCGCGACAGTAGCAGTTCTGGCGACTTCTCTCGGTTCCGTCGGCAGCAACAGTGTTCGACGACGTCTTCTTGCGACGGTGTTGTGATTTTCCAGCGACTGGGTTATGTAGGAGCGACCGTAAGCTTGCTCTTTGGGTGATTTTGGAGTGGTTAAGTGCTCTTGGGGTGAAGTTTGACTAATTTATTTTGTTGTGTTGAATGCCCATTGATTTGTGGCTTTGGTTATAGAATCTTAAGCGAGGTCAAGACGACTTTCAACAGAGTTCGTGTGGGTATATTCCTTTGGCGTTTTTGGCGAATTTAGCTTTGGGTAAGTGAGATTTAAGATTATTTGGACCAATTTCACTCACTAATCAAATACCCATTAATTTTAGTTTTCAAATTCAAGATACCCATTGCGTTTGGAGGTTTAATCGTCGAATTGGAGCAATTTTAGAACCCGACTAGCAGCGTTAGAAGTCGGTTTTGGGTAAGTTTCTTCTTGATTTAGCCTCCGTTAGAGTTTAATTTAGTTCCTAAAAATTACCAATTCCTTTTGGACTTGTTTCAGTGTTGCCCATCCAATTTCGAGTTCATAATTGTGGATTTTTCACTCAATTAAAGTTCTGTTCAGCAAGCGACATTCCGTTTTGTATGGTTAAGGACTTTGGAGTTAAAAGAATTAATCTAGTTTTGTTCAGAATATTTAAGCCAGGGTAAGTGAACTTACTATTGAACATTTTAATTAGGTGCGCGTGTTTGATTTATCTAAAATTCTCGTGCTTATGAGTTGTTCTTGAAATTTACTATTATTGTTTAAAAGCATGAGAATTATGAATGAAAAACTTATATGTTTCATTATGTATGAGTTTATGAAAATTATTGAAAGCATGAAATTTATTATCATCGCTTTTAATCGTGAGTATTAAAATAATTGAGTTAGTGGTCTCTTTAAAATCCATTAAAGGGATTGAGTTTAAATTATTTATGAGTTTAAATTCATTAAAGGAATGAGTTTAAATTAGTGTACATGAAATTGATGTACATTCGGAGATGCCTACACAGGGCTTAAGGACATGAAATTGATGTACCTAAGTCGAGGTTTGTGAAATTGACGACCTCGAGGTTTCTTGAAATTGACGGCCTCCGTAGGAGACATATGAAATTGATGTGTCTAGGATATGCATGAAATTGATGTATATCTTCCCTCCAATTAAAGTTTAAAATAAAGTTTAGAGCCACCAAAATTATATTTGTTGTTATTTTTTAAATGTTTTTAAAGCGTGACCCAACCTCAATAGTAGGGTCACTTACTGAGTATTTAAAATACTCATTCTTTTCAAACATATATTTTTTTTTCAGGCTAACGCAAGGGCAGATGTAGGGCGATTGATGAAAATCGTTAGGCAGCCATGAGAGGACTTGAGTTCATACTTTATTTTCTTCCGCGTTAAGAACCATGTTTTACTTTATTTGAATTGTAAATTTGTTTTAAGAAATTTCTAGAGGCCTTGTACATTCATGTTTTAGAAATTATTTAAGCTTATTTAAAACCGTTGAAATCAGGGATAACGAATATAAAGTTTTGCTTTAAAGTTTTTGTTTAAATTAGTGTTACTATTTCAAATTATTTTTATTTAAAAAGGCCTCCAATACATGCATTGTCGTAACGGTCCCTTTAAGGCTTATTAAGAAGTCGGGTCGTTACACCCATGGTCTATACTAATCAGCCAACCGGTTAAGCACTTCATATTCCAAGGGATATCTCGGAACTTAGTCCCTTTAGCAGCTTCAATGCTACCAAAATTTGGCAGCATAACGGCATACATATAAGCAAATCCCAAATTTCCTATCACCGGAGAGTAAGACAATACACTTCTATAACCAAAGAGAGTCAGAACACACATCCACAACTCAACCACAACTTCAACAAACATTCAACCCATCCTCCAAATCATAAACAACATCCAGAGAAACCATAACTTATCCAACCCAAACATGCTTTGAAGTGAACCAAAAGATGTTTTTCCAACTAAAGGCAATCTCAACAGACTACAATTAACCATAAAATCCTCATACAGACATCATGCCTCACAAAGAAACTCAACATGCTTATTTAAATTCAAAGGCAAAACTCAAGGCTTAAATTTGATTCATGCTAGCATGTTAAATTCTCAAAGAAAATTAGTCCAAAGCATAGGGCTTAGACCATTAACTACTTATCAATTCCAACAGTCACAAAATGAGTCTAAAGCACAGAAATTTGCATCCAAATGACTACTTACGTACAGGCTAACTCGACATGCTACAACTAACCATAACATTCTCATACTATTCTCATGCTTCAAAATGAATCAATCATGCTTATTGGAATCCAAGGGCAAAACTTAGATCTTAAATCCAACTCATGCTTGCACATCTAAATACTCAATTAAATGGTTCCAAGCATAGAACTTAATTCAATGGCTACTTACCTTAGTCAAATAAATAATGGACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCCTCAAAATTCGTTTAATTTCAAGATTTATGCAAGCTACACAAAAAGAGAAAAAACTTTCTTAAAAACCATAGTCTTCAAAACCAATTGAGTACTAAGAGCCAAATAATTTTGGGGATGAATTTATCACCCAAAACTAACCCAAACAGACCTTTAGGTTTGTTGTTCGAGATCTAATTTCGCTCCAAATCGAAGAATCAACCTCCAAATGTCATGGGTACCTTAAATCCAACAACAAAAATCAATGGGTAATTGAATAAGCATCAAAATCAACTTCATTCCTTTTTGTAAAACACTTACCCAATGCTAAAATCGCTGGGAATCAACGTAACTCAAAAACCCACTGCCTAAAACGTGCCAAAACTGCTGACAACCACCAAAATCTACTCTTGTCCATCGAAACTCGCGATCTATAGCCGCTGAAACACTGGAAAGAGGCCACCGCCGCTACTGCTTACACGAACGCACGTCGCCGGAGACAGATAGGGGAAGGGAAGAGAGAAATCGAGCGTGGGAGAGGAGGTTAGAGAGAGAAATCGACAGAAACGGAGAGACCTTACCAGAACAACCCAAATCGCTTGAACTCCCTGCCGTGAACCACGAAGACGAAGCCGCCGGACTGCTCTTAAACTGCTGCCACGACACCTCTGCACTCCGGAGAGACACCAACGATCCAAGCTTCGCCGGAGAGGAGACAACGGCGCCGGATAAATCCAAGAGGTGAAAAGAAGAAAATCTTGAAGAAGAAAAAGACCCCCTATTGGCTGGAAAAGGATGGCTTGGCTAAAAACCATATGAAATTAGGGCTGGCTGTCTTGGCTATTTGATAGGAAAATTACAAAATTGCCATTGACCCATAATTAACTATTTTTACTCCAATTAACACTATAATTGAGCCCCTAAATACAATTTAATTAGCCAAGCTTACTCAAATAAAATATAATTTGAGAAATTAACGCTTCCTTGAATTTAGAGATGTGTCGTCAGCCCATATAGAATAGTTGAAAATGTTCTTATTAAAGTAGGTAAATTTTTTCTCCCTATTGATTTCTTTATTATGGATATTAAGGAAAACCTTGCAATCTCAGTCATAGTAGGGAGACCTTTCCTTGCCACTGGGCGAGTCATTATTGACATAGAGCACAAGGAGCTGACTGTGAGAGTCTTACACGAGAAGGAAGTTTTCAAAGCATTCGTGAATCCTAAGGACGTTAAACAAGCGCTTTTGGGAGGCAACCCAAGTAAGTTTATTTTTGTTATGTTATTTTTATTTTATTGTTGTCTTTGTTTTGTAGGTCATTTGATCCTATAGTTTTTAGCTTGCAAGCAACAATGAGAAGGTTATCATCATTCCAGGCCAGTATTGTTCACCCCTTCCATTCCTTTATTGTTCTCATGCTTGATTATGCTTTACTTTTATATACATTGAGGACAATGCATGTTTTAAGTTTGGGGGTGGAATGCTTTGCTTCGTTGAGCCCTTGAGCAACTGAGTTCGAGTTATATTTTTTAGCATATTGTTGAATTTGGCATGTGGTTGTTTATGGATGTTATTTTTTTGCATGATTATGACTTCCTAGGATAGGCTCTTTTGTCAATTTTTAAGCTTTTGATGAGTTGTAAGCATGAGTGCCCAAACATGGAGACTTTTTAAAATTTTTCTAGGAGATGTCTTGCATTAGTAGAGTATTTTCCTTGGTTTAGAATTAGACTCGAATGCTTATGAGTGAATTATTAGGTTCATATGCTTGTTGTCACCTCGATAGGTGTAGGGAAGAACTAAAGAGTTAATTTTTGCAAATTAGCATGTTTAATCTTGCGTATGAGGAAAGAAAAGAATATATGCTTATCATGCTCATAAAGAAAAATTGTTCTTGTCTTTGCTTTTGAAAGAAAATTATGTCGGCTTGTGTACACAATATGCAATAATAATAATGTTTCAAACAAAAGAGCTACCCATGTTGTGAACAGTTAGGCCAACCAAGGGTTAAACTCGGGTCATGGGTCCCTACAATAGGTGTATGAAAGCTAGTGCCACTTTTAAATGTTTGATTCAAGTTTAATTTAAAGCACTTAGGTATGGATAAAAACAAACTAATTTGTTCCATTGACTCATTAGTAAATCCTAAGTGCCATATAGAAGGAAGATGAGTTGAGAGTTTAATAATATAATCCCGAGCTAGTAAAGTCTAATCTAATTAAGTTAGATCTTGCCTATGCAAGTTAATTTTGGAAAATTTTCGATTTGTCTCCTTCATTGGGCCTTATGTGCACGTCTTTTGATTGCTTGATTGCTGACTTCTGAGCCGTGAGGAATGAGTCATGTTTGTTGCATCTATTTTTTTTTATTGACCTATGCTTAATTCTTAGTTTGCTCGAGGATTAGCAAAATCTTAAGTTTGGGGGTGTTTGATAGCGAGGATAGCAAGTTATTTTTCCCTATCTATTTTAGTTAGTCTTTGAGAATAAATTGGCCAAAATTATGCATTTTAATGTTCTATTTGTAGGAATGAATTATTGGAGCTAAATCGTGAAAATGGAGTTGATCGGGTGTTCGGGACCGAAAAAAGGCCAAGGAATCGAAAAGAATCAAAATTGGAGGCTTACAAATGAGGCTAATCCGAGAGCTAGCGTTGAGACGCTACTTTCTGGGTGTCTCGATGCTAGCAATTTCCTTATCTGATTCAGGCGGCAAAAGTCACTCGACGCTCTAAGTTTTTCTTTAAACATAATGGGCGGCAATGGGACAGCGTCGCGACACTGTCGGCAGAATCTGTATAAATAGAAGCGATTTGCTACGCCCAAGGGGGACGTCCTTTGGGGACTTTTTAGCCCTAATTCCGATTAGAGACCTCTTGTGGAAGCTAGAGGAAGCTTAAAGAGCGGGATTGAAGACATTAGCTCGAGGAGATCGTCACAGGAACTGCAGCATCAACGAGACTAGAGTTTTTATCTTTCTTTTCTATTCTTTAGTTGTTGTTATGACTTTCATGGTATCTAGCTTATATTGTAATGCAAATTATGAGTAGCTAGGCCTTTAATCCTTAGGGATTGATGTAGCCTTTGGGCATTATGGATTAATGTTGGATGTATGCTTTGATTTCATTTATTCATAGTCTTTTCTTAATGCTTTCAATTTATAGGCCATGAATTGAATGATGTTTAGTCTAAATCTTGCTTGGGAGAGGTAGTTTGCTTAGATCTTGATATGCATAACTTGAATAGTCTTAAGATCGGGAGATTTAAGATAATCTTAGAAATCATTAAAAAGGATTATACTTAATACCTTCCATGTTCTCATTTTGGGATTTTGTTTGTGTTATTTGTTGATGATTATGTGGTTTGAGTTTGACTTGTTTTGCTGACTTGTGGATTCAATTTGTGTTGGAAATGGAATTCTTTATCATTCTTGATCGGAGCATATTGTGTAGTGATGTTATGAAGTTGTGAATGATTAAATGGCTTTTGTTTGCTTTGGGCTCATGATTTGAAGTGGATTTAAGGTATTATGGATATCAGGCCATTGGGCCATAAGAAGGAGGACACAAAGACTATGGGCCAACCCACAACTCAAACAGACAGATCAAATACGGTCCAGAAGGATCGAATAACAACCTGAAGCATCAAATAGAATTTGTTGATATTATTACTCAATGATTTTCTGCCATCTGTCTATTCTTCTGTATTTTTGTTATTCATTTATTCTTTATTATTTTGGCCCTTTTTGTGTATAAAATGTAATCCCTCCTGATTCTTTGAAATATAGAAACTGAGTATTATCTCGTCTGATTTCTCTCTTTTCCAGTAAATCGTAATCTGGTATCAGAGCTTGAGAATGACTAGCGTCAATTCAGCCGCTGCCACCAGAATGAATTTCAGCAGCCCACCGCTCAATCAACTATTAAATCAGTGACGACTATCAAACTAGACCGTGGAAATTTTCTTCTGTGGAAGAACCTTGCACTACCGATCCTTAGGAGCTATAGATTGGAGGGACATTTAACCGGTGAGAAACCATGCCTAGCAAAATTTCTTCAAGCTACTGGTGGAAGATCGAATCCTAGTTCTTCTCATGCTGGAGCAGGAGCATCGAGCTCAGAGGTCGCAATAAGTGAGGCGGCAGAATCCCTCCCTACCCAAGAGGTAAACCCGTTGTATGACTCTTGGATAGCGACAGACCAACTCCTACTTGGTTGGTTATATAATTCCATAACGGCAGAAGTTGCTACCCAAGTCATGGGATGTGAGAATGCTCAAGAGTTATGGTCAGTCATACAAGAACTGTTTGACGTTCAATCGAGGGCGGAAGAGGATTATCTCTGTCAAGTCTTCCAACAATCGAGAAAAGGTAATTTAAAAATGAATGATTATTTGTGTCCTATGAAGAATCATGCAGATAACCTTGGTTAAGCTGGGAGCCTTGTTAGTACTCGTACCCTAATTTTGCAAGTCCTTTTGGACTTGATGAGGAATTCAATCCGGTCGTAGCCATGATACAAGGGAGGTCAGACATAAGTTGGTCTGAAATACAAGCAGAATTGCTTGTGTTTGAGAAGCGGTTGGAGTTGCAGAACAATTTGAAGAGTTCTTTATCACTTGGCCAGGGAGCAGCAGTGAATATGGCCAATGTTAAAGATGCAGGACATCAGAAATCTTAGAACAACAACAACAACAGAACTAATAATTATAATATTTATGAAAACATATTGTGTGTGCCTAATATCGCTAAGAACCTTGTTAATGTCCCAAGTTGGCTAAGGACAATAATATTTATGTTGAGTTTCGTGATCGTTTTTGTATTGTAAAGGACAAGGCTACGAGCAAGGAGCTCTTGAGAGGGGTGCTCGTTGAAGGTTTATATCGATTTGATGGTGCCATTGCTGCTGCAGTTGATATTTCTAAGTCTGGAAACTACAGTAGAGGTCTATCTAGTATGAATAAGGGTGCATCATCTGCTTTTGTGTTGTCAAGTTCTGTTAATGTTGCGATTTCAAAAGTTATATGGCATAGGCGTCTTGGACATCCGTCTGAAAAAGTACTTGATTCAATTGTCAAACGATGTAATCTGTCTTATAAAGTTAATGAGAAGTTATTGTGCAATTTTTCGCAAGTGTACGGTTGCCCAAGTAATATTAAAACGAAAAGTATTTCGAGTATCGAATCCTCAGGGAATTTGAATTATATCCATTAA

mRNA sequence

ATGCTAGATTCAGTTAGTGGTGGTGATGCGCTTGGTTCGACACCCAATGAGGCACGAGAGATCAGTACAAACCTGACAGAAAACACTCAGTTCCATGCCACTTCCCATGATGAGCTAGAATGCCAAATTTCAAGCAGTAGCAGGCTCAGATGGTATTTAAATAATATGTTTGGAAAGGTTGAAGATTTCTTGATTAAAATTTCTTATGTTGTGCACCCTGTGTGCAAGATGAGCCTTTCTATGCAGGAATTGAAGAAGAAGAAAGATCCTCTTAGGATCAAAGAGTCGCCTAGGAGGTCTTCACCACGATTTGCAGCTGCCAGTCACGAGCTCCGATGTCACCTACGTACTCCAGCCAACAGCAAACCTCACGGCGGCGCGTTCTCTCCGGCGAGTCCTGACGTGCGCAGGCGCGACAGTAGCAGTTCTGGCGACTTCTCTCGGTTCCGTCGGCAGCAACAGTGTTCGACGACGTCTTCTTGCGACGGTGTTGTGATTTTCCAGCGACTGGGTTATGTAGGAGCGACCAATCTTAAGCGAGGTCAAGACGACTTTCAACAGAGTTCGTGTGGGTATATTCCTTTGGCGTTTTTGGCGAATTTAGCTTTGGCCGCTGAAACACTGGAAAGAGGCCACCGCCGCTACTGCTTACACGAACGCACGTCGCCGGAGACAGATAGGGGAAGGGAAGAGAGAAATCGAGCGTGGGAGAGGAGGTTAGAGAGAGAAATCGACAGAAACGGAGAGACCTTACCAGAACAACCCAAATCGCTTGAACTCCCTGCCGTGAACCACGAAGACGAAGCCGCCGGACTGCTCTTAAACTGCTGCCACGACACCTCTGCACTCCGGAGAGACACCAACGATCCAAGCTTCGCCGGAGAGGAGACAACGGCGCCGGATAAATCCAAGAGGTCATTTGATCCTATAGTTTTTAGCTTGCAAGCAACAATGAGAAGCCGCTGCCACCAGAATGAATTTCAGCAGCCCACCGCTCAATCAACTATTAAATCAGTGACGACTATCAAACTAGACCGTGGAAATTTTCTTCTGTGGAAGAACCTTGCACTACCGATCCTTAGGAGCTATAGATTGGAGGGACATTTAACCGGTGAGAAACCATGCCTAGCAAAATTTCTTCAAGCTACTGGTGGAAGATCGAATCCTAGTTCTTCTCATGCTGGAGCAGGAGCATCGAGCTCAGAGGTCGCAATAAGTGAGGCGGCAGAATCCCTCCCTACCCAAGAGAAGTTGCTACCCAAGTCATGGGATGTGAGAATGCTCAAGAGTTATGGTCAGTCATACAAGAACTGTTTGACGTTCAATCGAGGGCGGAAGAGGATTATCTCTGTCAAGTCTTCCAACAATCGAGAAAAGTACTCGTACCCTAATTTTGCAAGTCCTTTTGGACTTGATGAGGAATTCAATCCGGTCGTAGCCATGATACAAGGGAGGTCAGACATAAGTTGGTCTGAAATACAAGCAGAATTGCTTGTGTTTGAGAAGCGGTTGGAGTTGCAGAACAATTTGAAGAGTTCTTTATCACTTGGCCAGGGAGCAGCAGTGAATATGGCCAATGACAAGGCTACGAGCAAGGAGCTCTTGAGAGGGGTGCTCGTTGAAGGTTTATATCGATTTGATGGTGCCATTGCTGCTGCAGTTGATATTTCTAAGTCTGGAAACTACAGTAGAGGTCTATCTAGTATGAATAAGGGTGCATCATCTGCTTTTGTGTTGTCAAGTTCTGTTAATGTTGCGATTTCAAAAGTTATATGGCATAGGCGTCTTGGACATCCGTCTGAAAAAGTACTTGATTCAATTGTCAAACGATGTAATCTGTCTTATAAAGTTAATGAGAAGTTATTGTGCAATTTTTCGCAAGTGTACGGTTGCCCAAGTAATATTAAAACGAAAAGTATTTCGAGTATCGAATCCTCAGGGAATTTGAATTATATCCATTAA

Coding sequence (CDS)

ATGCTAGATTCAGTTAGTGGTGGTGATGCGCTTGGTTCGACACCCAATGAGGCACGAGAGATCAGTACAAACCTGACAGAAAACACTCAGTTCCATGCCACTTCCCATGATGAGCTAGAATGCCAAATTTCAAGCAGTAGCAGGCTCAGATGGTATTTAAATAATATGTTTGGAAAGGTTGAAGATTTCTTGATTAAAATTTCTTATGTTGTGCACCCTGTGTGCAAGATGAGCCTTTCTATGCAGGAATTGAAGAAGAAGAAAGATCCTCTTAGGATCAAAGAGTCGCCTAGGAGGTCTTCACCACGATTTGCAGCTGCCAGTCACGAGCTCCGATGTCACCTACGTACTCCAGCCAACAGCAAACCTCACGGCGGCGCGTTCTCTCCGGCGAGTCCTGACGTGCGCAGGCGCGACAGTAGCAGTTCTGGCGACTTCTCTCGGTTCCGTCGGCAGCAACAGTGTTCGACGACGTCTTCTTGCGACGGTGTTGTGATTTTCCAGCGACTGGGTTATGTAGGAGCGACCAATCTTAAGCGAGGTCAAGACGACTTTCAACAGAGTTCGTGTGGGTATATTCCTTTGGCGTTTTTGGCGAATTTAGCTTTGGCCGCTGAAACACTGGAAAGAGGCCACCGCCGCTACTGCTTACACGAACGCACGTCGCCGGAGACAGATAGGGGAAGGGAAGAGAGAAATCGAGCGTGGGAGAGGAGGTTAGAGAGAGAAATCGACAGAAACGGAGAGACCTTACCAGAACAACCCAAATCGCTTGAACTCCCTGCCGTGAACCACGAAGACGAAGCCGCCGGACTGCTCTTAAACTGCTGCCACGACACCTCTGCACTCCGGAGAGACACCAACGATCCAAGCTTCGCCGGAGAGGAGACAACGGCGCCGGATAAATCCAAGAGGTCATTTGATCCTATAGTTTTTAGCTTGCAAGCAACAATGAGAAGCCGCTGCCACCAGAATGAATTTCAGCAGCCCACCGCTCAATCAACTATTAAATCAGTGACGACTATCAAACTAGACCGTGGAAATTTTCTTCTGTGGAAGAACCTTGCACTACCGATCCTTAGGAGCTATAGATTGGAGGGACATTTAACCGGTGAGAAACCATGCCTAGCAAAATTTCTTCAAGCTACTGGTGGAAGATCGAATCCTAGTTCTTCTCATGCTGGAGCAGGAGCATCGAGCTCAGAGGTCGCAATAAGTGAGGCGGCAGAATCCCTCCCTACCCAAGAGAAGTTGCTACCCAAGTCATGGGATGTGAGAATGCTCAAGAGTTATGGTCAGTCATACAAGAACTGTTTGACGTTCAATCGAGGGCGGAAGAGGATTATCTCTGTCAAGTCTTCCAACAATCGAGAAAAGTACTCGTACCCTAATTTTGCAAGTCCTTTTGGACTTGATGAGGAATTCAATCCGGTCGTAGCCATGATACAAGGGAGGTCAGACATAAGTTGGTCTGAAATACAAGCAGAATTGCTTGTGTTTGAGAAGCGGTTGGAGTTGCAGAACAATTTGAAGAGTTCTTTATCACTTGGCCAGGGAGCAGCAGTGAATATGGCCAATGACAAGGCTACGAGCAAGGAGCTCTTGAGAGGGGTGCTCGTTGAAGGTTTATATCGATTTGATGGTGCCATTGCTGCTGCAGTTGATATTTCTAAGTCTGGAAACTACAGTAGAGGTCTATCTAGTATGAATAAGGGTGCATCATCTGCTTTTGTGTTGTCAAGTTCTGTTAATGTTGCGATTTCAAAAGTTATATGGCATAGGCGTCTTGGACATCCGTCTGAAAAAGTACTTGATTCAATTGTCAAACGATGTAATCTGTCTTATAAAGTTAATGAGAAGTTATTGTGCAATTTTTCGCAAGTGTACGGTTGCCCAAGTAATATTAAAACGAAAAGTATTTCGAGTATCGAATCCTCAGGGAATTTGAATTATATCCATTAA

Protein sequence

MLDSVSGGDALGSTPNEAREISTNLTENTQFHATSHDELECQISSSSRLRWYLNNMFGKVEDFLIKISYVVHPVCKMSLSMQELKKKKDPLRIKESPRRSSPRFAAASHELRCHLRTPANSKPHGGAFSPASPDVRRRDSSSSGDFSRFRRQQQCSTTSSCDGVVIFQRLGYVGATNLKRGQDDFQQSSCGYIPLAFLANLALAAETLERGHRRYCLHERTSPETDRGREERNRAWERRLEREIDRNGETLPEQPKSLELPAVNHEDEAAGLLLNCCHDTSALRRDTNDPSFAGEETTAPDKSKRSFDPIVFSLQATMRSRCHQNEFQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGRSNPSSSHAGAGASSSEVAISEAAESLPTQEKLLPKSWDVRMLKSYGQSYKNCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSDISWSEIQAELLVFEKRLELQNNLKSSLSLGQGAAVNMANDKATSKELLRGVLVEGLYRFDGAIAAAVDISKSGNYSRGLSSMNKGASSAFVLSSSVNVAISKVIWHRRLGHPSEKVLDSIVKRCNLSYKVNEKLLCNFSQVYGCPSNIKTKSISSIESSGNLNYIH

Homology

[Close]

BLAST of Lag0041682 vs. NCBI nr
Match: KAA0054901.1 (T3P18.3 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 7.0e-20
Identity = 105/350 (30.00%), Postives = 156/350 (44.57%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +    + KLDR N+LLWK +ALPIL++        GE         +T   
Sbjct: 16  FTTPPLNQLLNQFPSTKLDRTNYLLWKTIALPILKT-------VGE---------STETV 75

Query: 387 SNPSSSHAGAGASSSEVAISEAAESLPTQEK-----LLPKSWDVRML------------- 446
           S  +SS    G ++S     ++    P  EK     LL   W    +             
Sbjct: 76  SVKASSAVSEGTTASSSTSMDSKIVNPKYEKWVTSDLLLLGWIYNSMVSDMALQLMEFNT 135

Query: 447 -KSYGQSYKNCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSD 506
            K   ++ KN       +K+I  V SS    K S        GL + +NPV A+IQG+ D
Sbjct: 136 GKDLWEAIKNLFGIQSRQKKIFFVTSSKLLRKVS-------LGLYKVYNPVTAVIQGKPD 195

Query: 507 ISWSEIQAELLVFEKRLELQNNLKS----SLSLGQGAAV--------------------- 566
           I   ++Q+ELL+FEK LE QN+ ++    ++ +G G  +                     
Sbjct: 196 IFLLDMQSELLIFEKHLEHQNSQRNPGNENVVVGNGNKLQISCVGYASLADGKNCLRLDN 255

Query: 567 ---------NMANDKATSKELLRGVLVEGLYRFDG-AIAAAVDISKSGNYSRGLSSMNKG 621
                    NMA D  T   LL+G L +GLY  +G A+ +  ++  S +  +    +N  
Sbjct: 256 ILCVPEVKKNMAKD--TGGVLLKGTLSDGLYHLEGVAVKSVGELEHSDSSKKQFEHINN- 315

[Close]

BLAST of Lag0041682 vs. NCBI nr
Match: TYK22689.1 (T3P18.3 [Cucumis melo var. makuwa])

HSP 1 Score: 110.2 bits (274), Expect = 7.0e-20
Identity = 105/350 (30.00%), Postives = 156/350 (44.57%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +    + KLDR N+LLWK +ALPIL++        GE         +T   
Sbjct: 16  FTTPPLNQLLNQFPSTKLDRTNYLLWKTIALPILKT-------VGE---------STETV 75

Query: 387 SNPSSSHAGAGASSSEVAISEAAESLPTQEK-----LLPKSWDVRML------------- 446
           S  +SS    G ++S     ++    P  EK     LL   W    +             
Sbjct: 76  SVKASSAVSEGTTASSSTSMDSKIVNPKYEKWVTSDLLLLGWIYNSMVSDMALQLMEFNT 135

Query: 447 -KSYGQSYKNCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSD 506
            K   ++ KN       +K+I  V SS    K S        GL + +NPV A+IQG+ D
Sbjct: 136 GKDLWEAIKNLFGIQSRQKKIFFVTSSKLLRKVS-------LGLYKVYNPVTAVIQGKPD 195

Query: 507 ISWSEIQAELLVFEKRLELQNNLKS----SLSLGQGAAV--------------------- 566
           I   ++Q+ELL+FEK LE QN+ ++    ++ +G G  +                     
Sbjct: 196 IFLLDMQSELLIFEKHLEHQNSQRNPGNENVVVGNGNKLQISCVGYASLADGKNCLRLDN 255

Query: 567 ---------NMANDKATSKELLRGVLVEGLYRFDG-AIAAAVDISKSGNYSRGLSSMNKG 621
                    NMA D  T   LL+G L +GLY  +G A+ +  ++  S +  +    +N  
Sbjct: 256 ILCVPEVKKNMAKD--TGGVLLKGTLSDGLYHLEGVAVKSVGELEHSDSSKKQFEHINN- 315

[Close]

BLAST of Lag0041682 vs. NCBI nr
Match: XP_016902203.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo])

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-18
Identity = 76/210 (36.19%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +  +TT+KLDR N+LLWK LALPIL+ Y+LEGHLT E PC + F+  +   
Sbjct: 18  FSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFV-LSASS 77

Query: 387 SNPSSSHAGA----GASSSEV--AISEAAESLPTQEKLLPKSWDVRMLKS----YGQSYK 446
           SN + +  GA    GASSS     ++   E   T + LL   W    +          + 
Sbjct: 78  SNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLL-LGWLYNSMTPDVAIQLMGFT 137

Query: 447 NCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSDISWSEIQAE 506
           N        +    V+S    +        +  GLDE +N V+ +IQG+ DISW ++Q++
Sbjct: 138 NVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSK 197

Query: 507 LLVFEKRLELQNNLKSSL-SLGQGAAVNMA 526
           LL+FEKRL+ QN  K +  ++ Q  A+NMA
Sbjct: 198 LLIFEKRLKHQNTQKKNTGNITQSPALNMA 225

[Close]

BLAST of Lag0041682 vs. NCBI nr
Match: XP_016902205.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo])

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-18
Identity = 76/210 (36.19%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +  +TT+KLDR N+LLWK LALPIL+ Y+LEGHLT E PC + F+  +   
Sbjct: 18  FSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFV-LSASS 77

Query: 387 SNPSSSHAGA----GASSSEV--AISEAAESLPTQEKLLPKSWDVRMLKS----YGQSYK 446
           SN + +  GA    GASSS     ++   E   T + LL   W    +          + 
Sbjct: 78  SNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLL-LGWLYNSMTPDVAIQLMGFT 137

Query: 447 NCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSDISWSEIQAE 506
           N        +    V+S    +        +  GLDE +N V+ +IQG+ DISW ++Q++
Sbjct: 138 NVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSK 197

Query: 507 LLVFEKRLELQNNLKSSL-SLGQGAAVNMA 526
           LL+FEKRL+ QN  K +  ++ Q  A+NMA
Sbjct: 198 LLIFEKRLKHQNTQKKNTGNITQSPALNMA 225

[Close]

BLAST of Lag0041682 vs. NCBI nr
Match: XP_016902197.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo])

HSP 1 Score: 105.5 bits (262), Expect = 1.7e-18
Identity = 76/210 (36.19%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +  +TT+KLDR N+LLWK LALPIL+ Y+LEGHLT E PC + F+  +   
Sbjct: 18  FSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFV-LSASS 77

Query: 387 SNPSSSHAGA----GASSSEV--AISEAAESLPTQEKLLPKSWDVRMLKS----YGQSYK 446
           SN + +  GA    GASSS     ++   E   T + LL   W    +          + 
Sbjct: 78  SNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLL-LGWLYNSMTPDVAIQLMGFT 137

Query: 447 NCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSDISWSEIQAE 506
           N        +    V+S    +        +  GLDE +N V+ +IQG+ DISW ++Q++
Sbjct: 138 NVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSK 197

Query: 507 LLVFEKRLELQNNLKSSL-SLGQGAAVNMA 526
           LL+FEKRL+ QN  K +  ++ Q  A+NMA
Sbjct: 198 LLIFEKRLKHQNTQKKNTGNITQSPALNMA 225

[Close]

BLAST of Lag0041682 vs. ExPASy TrEMBL
Match: A0A5A7UMW2 (T3P18.3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G00280 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.4e-20
Identity = 105/350 (30.00%), Postives = 156/350 (44.57%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +    + KLDR N+LLWK +ALPIL++        GE         +T   
Sbjct: 16  FTTPPLNQLLNQFPSTKLDRTNYLLWKTIALPILKT-------VGE---------STETV 75

Query: 387 SNPSSSHAGAGASSSEVAISEAAESLPTQEK-----LLPKSWDVRML------------- 446
           S  +SS    G ++S     ++    P  EK     LL   W    +             
Sbjct: 76  SVKASSAVSEGTTASSSTSMDSKIVNPKYEKWVTSDLLLLGWIYNSMVSDMALQLMEFNT 135

Query: 447 -KSYGQSYKNCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSD 506
            K   ++ KN       +K+I  V SS    K S        GL + +NPV A+IQG+ D
Sbjct: 136 GKDLWEAIKNLFGIQSRQKKIFFVTSSKLLRKVS-------LGLYKVYNPVTAVIQGKPD 195

Query: 507 ISWSEIQAELLVFEKRLELQNNLKS----SLSLGQGAAV--------------------- 566
           I   ++Q+ELL+FEK LE QN+ ++    ++ +G G  +                     
Sbjct: 196 IFLLDMQSELLIFEKHLEHQNSQRNPGNENVVVGNGNKLQISCVGYASLADGKNCLRLDN 255

Query: 567 ---------NMANDKATSKELLRGVLVEGLYRFDG-AIAAAVDISKSGNYSRGLSSMNKG 621
                    NMA D  T   LL+G L +GLY  +G A+ +  ++  S +  +    +N  
Sbjct: 256 ILCVPEVKKNMAKD--TGGVLLKGTLSDGLYHLEGVAVKSVGELEHSDSSKKQFEHINN- 315

[Close]

BLAST of Lag0041682 vs. ExPASy TrEMBL
Match: A0A5D3DHC7 (T3P18.3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00040 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.4e-20
Identity = 105/350 (30.00%), Postives = 156/350 (44.57%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +    + KLDR N+LLWK +ALPIL++        GE         +T   
Sbjct: 16  FTTPPLNQLLNQFPSTKLDRTNYLLWKTIALPILKT-------VGE---------STETV 75

Query: 387 SNPSSSHAGAGASSSEVAISEAAESLPTQEK-----LLPKSWDVRML------------- 446
           S  +SS    G ++S     ++    P  EK     LL   W    +             
Sbjct: 76  SVKASSAVSEGTTASSSTSMDSKIVNPKYEKWVTSDLLLLGWIYNSMVSDMALQLMEFNT 135

Query: 447 -KSYGQSYKNCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSD 506
            K   ++ KN       +K+I  V SS    K S        GL + +NPV A+IQG+ D
Sbjct: 136 GKDLWEAIKNLFGIQSRQKKIFFVTSSKLLRKVS-------LGLYKVYNPVTAVIQGKPD 195

Query: 507 ISWSEIQAELLVFEKRLELQNNLKS----SLSLGQGAAV--------------------- 566
           I   ++Q+ELL+FEK LE QN+ ++    ++ +G G  +                     
Sbjct: 196 IFLLDMQSELLIFEKHLEHQNSQRNPGNENVVVGNGNKLQISCVGYASLADGKNCLRLDN 255

Query: 567 ---------NMANDKATSKELLRGVLVEGLYRFDG-AIAAAVDISKSGNYSRGLSSMNKG 621
                    NMA D  T   LL+G L +GLY  +G A+ +  ++  S +  +    +N  
Sbjct: 256 ILCVPEVKKNMAKD--TGGVLLKGTLSDGLYHLEGVAVKSVGELEHSDSSKKQFEHINN- 315

[Close]

BLAST of Lag0041682 vs. ExPASy TrEMBL
Match: A0A1S4E1U9 (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.4e-19
Identity = 76/210 (36.19%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +  +TT+KLDR N+LLWK LALPIL+ Y+LEGHLT E PC + F+  +   
Sbjct: 18  FSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFV-LSASS 77

Query: 387 SNPSSSHAGA----GASSSEV--AISEAAESLPTQEKLLPKSWDVRMLKS----YGQSYK 446
           SN + +  GA    GASSS     ++   E   T + LL   W    +          + 
Sbjct: 78  SNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLL-LGWLYNSMTPDVAIQLMGFT 137

Query: 447 NCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSDISWSEIQAE 506
           N        +    V+S    +        +  GLDE +N V+ +IQG+ DISW ++Q++
Sbjct: 138 NVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSK 197

Query: 507 LLVFEKRLELQNNLKSSL-SLGQGAAVNMA 526
           LL+FEKRL+ QN  K +  ++ Q  A+NMA
Sbjct: 198 LLIFEKRLKHQNTQKKNTGNITQSPALNMA 225

[Close]

BLAST of Lag0041682 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.4e-19
Identity = 76/210 (36.19%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +  +TT+KLDR N+LLWK LALPIL+ Y+LEGHLT E PC + F+  +   
Sbjct: 18  FSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFV-LSASS 77

Query: 387 SNPSSSHAGA----GASSSEV--AISEAAESLPTQEKLLPKSWDVRMLKS----YGQSYK 446
           SN + +  GA    GASSS     ++   E   T + LL   W    +          + 
Sbjct: 78  SNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLL-LGWLYNSMTPDVAIQLMGFT 137

Query: 447 NCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSDISWSEIQAE 506
           N        +    V+S    +        +  GLDE +N V+ +IQG+ DISW ++Q++
Sbjct: 138 NVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSK 197

Query: 507 LLVFEKRLELQNNLKSSL-SLGQGAAVNMA 526
           LL+FEKRL+ QN  K +  ++ Q  A+NMA
Sbjct: 198 LLIFEKRLKHQNTQKKNTGNITQSPALNMA 225

[Close]

BLAST of Lag0041682 vs. ExPASy TrEMBL
Match: A0A1S4E1V2 (uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.4e-19
Identity = 76/210 (36.19%), Postives = 110/210 (52.38%), Query Frame = 0


Query: 327 FQQPTAQSTIKSVTTIKLDRGNFLLWKNLALPILRSYRLEGHLTGEKPCLAKFLQATGGR 386
           F  P     +  +TT+KLDR N+LLWK LALPIL+ Y+LEGHLT E PC + F+  +   
Sbjct: 18  FSNPPLNQILNQLTTVKLDRKNYLLWKTLALPILKDYKLEGHLTAETPCPSHFV-LSASS 77

Query: 387 SNPSSSHAGA----GASSSEV--AISEAAESLPTQEKLLPKSWDVRMLKS----YGQSYK 446
           SN + +  GA    GASSS     ++   E   T + LL   W    +          + 
Sbjct: 78  SNTTVTEEGADATIGASSSITPRIVNPLFEQWVTTDLLL-LGWLYNSMTPDVAIQLMGFT 137

Query: 447 NCLTFNRGRKRIISVKSSNNREKYSYPNFASPFGLDEEFNPVVAMIQGRSDISWSEIQAE 506
           N        +    V+S    +        +  GLDE +N V+ +IQG+ DISW ++Q++
Sbjct: 138 NVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGLDEVYNLVIVVIQGKPDISWLDMQSK 197

Query: 507 LLVFEKRLELQNNLKSSL-SLGQGAAVNMA 526
           LL+FEKRL+ QN  K +  ++ Q  A+NMA
Sbjct: 198 LLIFEKRLKHQNTQKKNTGNITQSPALNMA 225

The following BLAST results are available for this feature:

BLAST of Lag0041682 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0054901.1	7.0e-20	30.00	T3P18.3 [Cucumis melo var. makuwa]	[more]
TYK22689.1	7.0e-20	30.00	T3P18.3 [Cucumis melo var. makuwa]	[more]
XP_016902203.1	1.7e-18	36.19	PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]	[more]
XP_016902205.1	1.7e-18	36.19	PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]	[more]
XP_016902197.1	1.7e-18	36.19	PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]	[more]

BLAST of Lag0041682 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0041682 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UMW2	3.4e-20	30.00	T3P18.3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G00280 PE=4...	[more]
A0A5D3DHC7	3.4e-20	30.00	T3P18.3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00040 PE=4 ...	[more]
A0A1S4E1U9	8.4e-19	36.19	uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E1U6	8.4e-19	36.19	uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E1V2	8.4e-19	36.19	uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lag0041682 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 585..623 e-value: 6.6E-7 score: 29.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 285..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0041682.1	Lag0041682.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process