Lag0041661 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0041661
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr13: 23500300 .. 23501441 (+)
RNA-Seq ExpressionLag0041661
SyntenyLag0041661
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGGAACAAACGGAGACGGAGGAGATTATAAAGCACCTGAGGGCGCTAAAGGTAACTGAGGAGGAAAAAACAAGTGTATTCCATTTGAAGGAAGATGAGGTTGACTTATCTCAGAGGAAATTGGAAAACGCCCTTTTGTGCAAAATTCTCACAAACAAAAAAATCAATCCTGAGGTGTTCCAAAGAATGATGCCGAAAATATGGAGCCAAGAGCATACTGTGATAAAAGTGTGGGATTCAATGTGTTTCTATGCAAATTCAGGAATTCTCGTATTAAAGGTTGGATCAAGGAGGCGGGGCCATGGTTCTATGATAAAGCAATGTTGTTGATGGAGAAACCAAGAGGAGATAGTTGTGGAGATGACTTGGATTTCAGGTATGTATCCTTCTGGGTTCATTTCCATAAACTGCCTTTAGCTTGTTTTTCTAGGAACTCGGCAATGGAAATTGGGAGTCTACTTGGCAAGGTCGAACAACTAGATCTAGATGAAGAGCTGGAACAGTATGGAGATTGCTCATTGCGGGTAAAAGTGCAGATTGATGTTACATCTCCCCTCAAGTGAGGAATCTATCTTAAGTCGAAAACAAAGAAACCAGACAAGTGGATTAAGGGGTCGTATGAAAAGTTGCCGGACTTTTGTTATGGCTGCGGATTGTTAGGACATACGATTAAGGAGTGCGACCAAGCTAAAGATGCAACTGAAGAAACTCTCCCTTATGGCTCGTGGTTAAGAGAGCCAACAAGGCTCAAAGTTCAGGAGCCTAGCTATTGGTTTTTTAATGGGGGTCGTGGAAGAATTGGGGAGAGAGGTAGAGGTAGTTGGAGGCAACTGAATATCGAGGAGGATAGCTACACATCAAGTGAAAGTAATCTGGTGTTGCCATCGGAAAAGACAATTGACGGCGGAAAAGAAAATTCCAGTCCTCCGGCGAATCAAGAGAAACGTGATCCTCCTCCTCCGGGCGGTGGCCCAACGGTAACTTTGATGAATATGGAAGAAGCGGAAATTGCGGGGAAAATTGACGATCTGAGCGGCAAAATAAATGATGAAACGGATAGGAAAAAGTCAAGCGGTAGTATAAGTGACAAAGATTCATCCGGTGCGGAAATCAAGGAAGTATCTGTTGGATCGATATGA

mRNA sequence

ATGACGGAACAAACGGAGACGGAGGAGATTATAAAGCACCTGAGGGCGCTAAAGGTAACTGAGGAGGAAAAAACAAGTGTATTCCATTTGAAGGAAGATGAGGTTGACTTATCTCAGAGGAAATTGGAAAACGCCCTTTTGTGCAAAATTCTCACAAACAAAAAAATCAATCCTGAGGTGAATTCTCGTATTAAAGGTTGGATCAAGGAGGCGGGGCCATGGTTCTATGATAAAGCAATGTTGTTGATGGAGAAACCAAGAGGAGATAGTTGTGGAGATGACTTGGATTTCAGGTATGTATCCTTCTGGGTTCATTTCCATAAACTGCCTTTAGCTTGTTTTTCTAGGAACTCGGCAATGGAAATTGGGAGTCTACTTGGCAAGGTCGAACAACTAGATCTAGATGAAGAGCTGGAACAGTATGGAGATTGCTCATTGCGGTCGAAAACAAAGAAACCAGACAAGTGGATTAAGGGGTCGTATGAAAAGTTGCCGGACTTTTGTTATGGCTGCGGATTGTTAGGACATACGATTAAGGAGTGCGACCAAGCTAAAGATGCAACTGAAGAAACTCTCCCTTATGGCTCGTGGTTAAGAGAGCCAACAAGGCTCAAAGTTCAGGAGCCTAGCTATTGGTTTTTTAATGGGGGTCGTGGAAGAATTGGGGAGAGAGGTAGAGGTAGTTGGAGGCAACTGAATATCGAGGAGGATAGCTACACATCAAGTGAAAGTAATCTGGTGTTGCCATCGGAAAAGACAATTGACGGCGGAAAAGAAAATTCCAGTCCTCCGGCGAATCAAGAGAAACGTGATCCTCCTCCTCCGGGCGGTGGCCCAACGGTAACTTTGATGAATATGGAAGAAGCGGAAATTGCGGGGAAAATTGACGATCTGAGCGGCAAAATAAATGATGAAACGGATAGGAAAAAGTCAAGCGGTAGTATAAGTGACAAAGATTCATCCGGTGCGGAAATCAAGGAAGTATCTGTTGGATCGATATGA

Coding sequence (CDS)

ATGACGGAACAAACGGAGACGGAGGAGATTATAAAGCACCTGAGGGCGCTAAAGGTAACTGAGGAGGAAAAAACAAGTGTATTCCATTTGAAGGAAGATGAGGTTGACTTATCTCAGAGGAAATTGGAAAACGCCCTTTTGTGCAAAATTCTCACAAACAAAAAAATCAATCCTGAGGTGAATTCTCGTATTAAAGGTTGGATCAAGGAGGCGGGGCCATGGTTCTATGATAAAGCAATGTTGTTGATGGAGAAACCAAGAGGAGATAGTTGTGGAGATGACTTGGATTTCAGGTATGTATCCTTCTGGGTTCATTTCCATAAACTGCCTTTAGCTTGTTTTTCTAGGAACTCGGCAATGGAAATTGGGAGTCTACTTGGCAAGGTCGAACAACTAGATCTAGATGAAGAGCTGGAACAGTATGGAGATTGCTCATTGCGGTCGAAAACAAAGAAACCAGACAAGTGGATTAAGGGGTCGTATGAAAAGTTGCCGGACTTTTGTTATGGCTGCGGATTGTTAGGACATACGATTAAGGAGTGCGACCAAGCTAAAGATGCAACTGAAGAAACTCTCCCTTATGGCTCGTGGTTAAGAGAGCCAACAAGGCTCAAAGTTCAGGAGCCTAGCTATTGGTTTTTTAATGGGGGTCGTGGAAGAATTGGGGAGAGAGGTAGAGGTAGTTGGAGGCAACTGAATATCGAGGAGGATAGCTACACATCAAGTGAAAGTAATCTGGTGTTGCCATCGGAAAAGACAATTGACGGCGGAAAAGAAAATTCCAGTCCTCCGGCGAATCAAGAGAAACGTGATCCTCCTCCTCCGGGCGGTGGCCCAACGGTAACTTTGATGAATATGGAAGAAGCGGAAATTGCGGGGAAAATTGACGATCTGAGCGGCAAAATAAATGATGAAACGGATAGGAAAAAGTCAAGCGGTAGTATAAGTGACAAAGATTCATCCGGTGCGGAAATCAAGGAAGTATCTGTTGGATCGATATGA

Protein sequence

MTEQTETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPEVNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSKTKKPDKWIKGSYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLREPTRLKVQEPSYWFFNGGRGRIGERGRGSWRQLNIEEDSYTSSESNLVLPSEKTIDGGKENSSPPANQEKRDPPPPGGGPTVTLMNMEEAEIAGKIDDLSGKINDETDRKKSSGSISDKDSSGAEIKEVSVGSI
Homology
BLAST of Lag0041661 vs. NCBI nr
Match: XP_024042073.1 (uncharacterized protein LOC112099188 [Citrus clementina])

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-21
Identity = 65/240 (27.08%), Postives = 115/240 (47.92%), Query Frame = 0

Query: 6   ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------ 65
           +TEE+I+  +A+ + EE+K S   L  +  D  ++ L   L+ KI+ ++ +N E      
Sbjct: 2   DTEELIRKCKAITIREEDK-SKLSLVVNMKDQREQVLAGCLMGKIILSRGVNREGLKIAL 61

Query: 66  ------------------------VNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDL 125
                                        K  +   GPW +D+A++++ KP+G       
Sbjct: 62  QQVWQTFKEVKIESLGNNIFMFKFAEEADKRRVLSGGPWHFDRALIVLTKPKGIGEVSKQ 121

Query: 126 DFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCS---LRSKTKK 185
           DF ++ FWV  H +P+AC  R+   E+G ++ KVE+++ DE  + +G+ +   +     +
Sbjct: 122 DFTHIPFWVQIHNIPIACMERDFLQELGGIIRKVEEVETDENGDCFGEFARLRISINITQ 181

Query: 186 PDKWI-----KGS--------YEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR 200
           P K I     +G         YE+LPDFC+ CG++ H  KEC Q +   +E   +G W++
Sbjct: 182 PLKEILFLKQEGETDIPMPVVYERLPDFCFSCGIISHQFKECAQYQGQPKEEFSFGMWMK 240

BLAST of Lag0041661 vs. NCBI nr
Match: XP_024045326.1 (uncharacterized protein LOC112100347 [Citrus clementina])

HSP 1 Score: 112.1 bits (279), Expect = 9.4e-21
Identity = 72/240 (30.00%), Postives = 118/240 (49.17%), Query Frame = 0

Query: 6   ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE-VNSRI 65
           ETEE+I+   A+ + EEE+  V      +    ++     L+ KIL+ + I+ E V + +
Sbjct: 2   ETEELIRKCSAITLEEEEEDKVIFGGSMKAK-GEKIAAGCLVGKILSTRGISYEGVKAAL 61

Query: 66  K------GWIK-----------------------EAGPWFYDKAMLLMEKPRGDSCGDDL 125
           +      G IK                         GPW +D+A++++E+P+G     D 
Sbjct: 62  QQAWRPVGMIKVESLRHKIFMFKFYSEEDKRRVLMGGPWHFDRALIVLEEPKGIGNVADQ 121

Query: 126 DFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDC----------- 185
            F +VSFWV  H +PL C   N+  E+GS +G+VE +  DE  + +G+            
Sbjct: 122 PFSHVSFWVQLHNVPLMCMQINTIREMGSKIGRVEDVATDETGDCFGEYILVRISIDITK 181

Query: 186 ----SLRSKTKKPDKWIKG-SYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR 200
                LR + +  ++ + G  YEKLPD+C+ C  +GH  +EC Q K   +E+L YG+WL+
Sbjct: 182 RLKKVLRIQQENGEEIVVGVVYEKLPDYCFCCSHIGHQFRECAQYKGQPKESLAYGAWLK 240

BLAST of Lag0041661 vs. NCBI nr
Match: XP_024036938.1 (uncharacterized protein LOC112096937 [Citrus clementina])

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-20
Identity = 82/296 (27.70%), Postives = 130/296 (43.92%), Query Frame = 0

Query: 6   ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRK---LENALLCKILTNKKINPE--- 65
           +TEE+I+  +A+ + EE+K  +      EV+L ++K   +   L+ K+L  K +N E   
Sbjct: 2   DTEELIRKCQAITIREEDKAKI----TLEVNLEKKKEQMMAGCLVGKVLLTKGVNKEGLK 61

Query: 66  ---------------------------VNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCG 125
                                           K  + + GPW +D+A+ ++ +PRG    
Sbjct: 62  AALQQVWRTFKEVKIESMGNNIFMFKFAEEADKKRMLKGGPWHFDRALTVLAEPRGIGEV 121

Query: 126 DDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCSLRSKTKK 185
               F + SFWV    + LAC  ++   ++G  +G VE     E LE+        +T  
Sbjct: 122 AKQSFTHTSFWVQIRNVSLACMDKDFLRDLGGKIGSVE-----EPLEKILFLKQEGETDI 181

Query: 186 PDKWIKGSYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLREPT----RLKVQE 245
           P   I   YE LPDFCY CG++GH  KEC + +D   E LPYGSW++  T      + Q 
Sbjct: 182 P---IPVVYEHLPDFCYCCGIIGHQYKECGKYQDHPREDLPYGSWMKAITVGGFTKRNQN 241

Query: 246 PSYWFFNGGRGRIGERGRGSWRQLNIEEDSYTSSE---SNLVLPSEKTIDGGKENS 262
              W  N G G+  E+   S      ++          +N  +PSEK +    E++
Sbjct: 242 KERW--NYGAGKSDEKSASSGNHSFPQQQGQNQENPIGANGSIPSEKEMGQTMEHA 283

BLAST of Lag0041661 vs. NCBI nr
Match: XP_024033132.1 (uncharacterized protein LOC112095437 [Citrus clementina])

HSP 1 Score: 110.5 bits (275), Expect = 2.7e-20
Identity = 65/240 (27.08%), Postives = 111/240 (46.25%), Query Frame = 0

Query: 6   ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------ 65
           ETEE+I+  +A+ + E E+   F       +   + +   L+ KIL  + +N E      
Sbjct: 2   ETEELIRKCQAITL-EGEEADKFIFAGQMKEKGSKAVAGCLVGKILLARGVNREGLKTAL 61

Query: 66  ------------------------VNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDL 125
                                   ++   K  +   GPW +D+A++++++P+G       
Sbjct: 62  DQAWRTVHDFKVESLGSNIFVFKFLSEADKKRVFNGGPWHFDRALMVLQEPKGIGSIKKQ 121

Query: 126 DFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGD-------CSLRS 185
            F +VSFW+  H +PL C   +   E+GS +GKVE + +D + E +G+        ++  
Sbjct: 122 SFSHVSFWIRIHNVPLMCMDTSIIRELGSRVGKVEDIGMDAQGECFGEFVRIQVSVNITK 181

Query: 186 KTKK---------PDKWIKGSYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR 200
             KK          D  +   YE+LPDFC+ CG +GH  +EC + K   +E LP+G WL+
Sbjct: 182 PLKKLIVLKQEDDEDIPLPVVYERLPDFCFCCGCIGHQFRECMEYKGQQKENLPFGPWLK 240

BLAST of Lag0041661 vs. NCBI nr
Match: XP_006484927.1 (uncharacterized protein LOC102626623 [Citrus sinensis])

HSP 1 Score: 110.5 bits (275), Expect = 2.7e-20
Identity = 69/251 (27.49%), Postives = 118/251 (47.01%), Query Frame = 0

Query: 6   ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------ 65
           +TEE+I+  + + + +EE  +V  +   + D  +R   + L+ KIL N+ +N E      
Sbjct: 2   DTEELIRRCKTITLKDEEDDAVMFIGGMKND-GERVAAHCLVGKILLNRDVNKEGLRYAM 61

Query: 66  ------------------------VNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDL 125
                                      + K  +   GPW +DKA++++ +P G       
Sbjct: 62  QLAWKTTKEIKVESLGDNIFVFKFATEQDKKRVLTEGPWHFDKALIVLVEPVGMGSIKRQ 121

Query: 126 DFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGDCS---LRSKTKK 185
            F + SFWV  H +P+ C  + +  ++G  +G+VE+++ DEE E  G  +   +     K
Sbjct: 122 PFTHTSFWVQIHGMPIKCMVKGTIEKLGEKIGQVEEVETDEEGECIGPFARVRISVDITK 181

Query: 186 PDKWI-----KG--------SYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSWLR 211
           P K I     +G         Y++LPDFC+ CGL+GH  +EC Q K   +E L YG W++
Sbjct: 182 PLKRILILKQEGEEDIVMLIKYDRLPDFCFCCGLIGHQFRECIQYKGQPKEKLIYGGWMK 241

BLAST of Lag0041661 vs. ExPASy TrEMBL
Match: A0A1S8AC25 (CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-20
Identity = 69/245 (28.16%), Postives = 116/245 (47.35%), Query Frame = 0

Query: 6   ETEEIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPE------ 65
           + EE+IK  RA+++++EE   V      +++  ++ L   L+ K+L  ++++ E      
Sbjct: 2   DPEELIKRCRAIRLSDEEGGRVSFKNRMKIN-GEKILAGCLVGKVLHTREVSIEGLKMAM 61

Query: 66  -----------------------VNSRI-KGWIKEAGPWFYDKAMLLMEKPRGDSCGDDL 125
                                    S + K  I   GPW +D+A++ + +P G       
Sbjct: 62  QRVWRTSREVKIEKLGENVFMFKFGSEVDKRSIMVGGPWHFDRALIGLTEPTGIGDIKKQ 121

Query: 126 DFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGKVEQLDLDEELEQYGD---CSLRSKTKK 185
           DF +VSFWV  H +P+ C S++ A E+G ++GKVE+++ D   E +G      +     K
Sbjct: 122 DFSHVSFWVQIHDVPIMCMSKDMAAELGKVIGKVEEVETDAAGECFGQFLRLRISVDITK 181

Query: 186 PDKWI---------------KGSYEKLPDFCYGCGLLGHTIKECDQAKDATEETLPYGSW 203
           P K I               +  YE+LPDFC+ CG +GH  +EC   K  +++ L YG W
Sbjct: 182 PLKKIIELEQEEEDADDIPMRVMYERLPDFCFCCGRIGHQYRECFYYKSQSKDELAYGPW 241

BLAST of Lag0041661 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.7e-20
Identity = 61/194 (31.44%), Postives = 93/194 (47.94%), Query Frame = 0

Query: 65  KGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGS 124
           K  +  +GPW ++K++L++  P   +   D++F + +FW+  H +P  C S   A  +G+
Sbjct: 88  KSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGA 147

Query: 125 LLGKVEQLDLDEELEQYGDCSLRSKTK----KP-------------DKWIKGSYEKLPDF 184
            LG VE+++ D   + +    +R + K    KP             D W    YEKLPDF
Sbjct: 148 KLGDVEEIEGD-GADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKDIWCPLRYEKLPDF 207

Query: 185 CYGCGLLGHTIKECDQAKDATEETLP--YGSWLREPTRLK----VQEPSYW----FFNGG 232
           CY CG +GH+ +EC+Q         P  YG WLR     K     +E  +W    F  G 
Sbjct: 208 CYECGKIGHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGH 267

BLAST of Lag0041661 vs. ExPASy TrEMBL
Match: A0A5C7HVU6 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_012287 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-20
Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 0

Query: 60  VNSRIKGWIKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSA 119
           VNS  K  +   GPW ++ +++ +E+PRG     +L+F  VSFWV  H LPL C ++ + 
Sbjct: 22  VNSEDKRRVLSGGPWCFNDSIIALEEPRGMGKFQELEFCRVSFWVQLHNLPLLCMNQEAG 81

Query: 120 MEIGSLLGKVEQLD-------LDEELEQYGDCSLRSKTKKPDK-WIKGS---------YE 179
           + +G +LG+VE++D       LD+ L    +  +    K+  K  ++GS         YE
Sbjct: 82  LVLGRMLGRVEEIDLGYSRDCLDKFLRIRMNIDISQPLKRALKVGVEGSEEMATIVVRYE 141

Query: 180 KLPDFCYGCGLLGHTIKECDQAKDATEETLP--YGSWLREPTRLKVQEPSYWFFNGGRGR 239
            LP+ C+ CG+LGH ++EC   + + EE  P  YG+W+R  T +  +EP      G R R
Sbjct: 142 HLPELCFHCGILGHPLRECPLRRPSEEEGRPLKYGAWIRAGTVIG-EEP-----RGKRPR 201

Query: 240 IGERGRGSWRQLNIEEDSYTSS-ESNLVLPSEKTID 256
                  S  + N+ E   TS  +   VLP    ++
Sbjct: 202 GDGDHHSSGSKQNVSELKTTSRWKPKNVLPPPPVVE 231

BLAST of Lag0041661 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.1e-20
Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = 0

Query: 68  IKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLG 127
           I E GPW +DK +L++ +  G     DL FRYV FW+  H LPLAC +R   + +G L+G
Sbjct: 93  ILEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWIQLHNLPLACLNREIGLHLGGLVG 152

Query: 128 KVEQLDLDEELEQYGD-------CSLRSKTKKPDKWIKGS----------YEKLPDFCYG 187
           +V+++D  E  E  G          + +  K+  +   G           YE+LP+FCY 
Sbjct: 153 QVKEIDAGESGECVGQFIRIRVLIDVMNPLKRGLRVALGDDEKVNEVMICYERLPNFCYY 212

Query: 188 CGLLGHTIKECD-QAKDAT-EETLPYGSWLREPTRLK 206
           CG +GH +++C    K+ T   +  +G W+R  +R +
Sbjct: 213 CGKIGHLVRDCPLNTKEITSSSSFKFGPWMRAVSRTR 249

BLAST of Lag0041661 vs. ExPASy TrEMBL
Match: A0A5C7IJL6 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_004250 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 5.1e-20
Identity = 69/231 (29.87%), Postives = 110/231 (47.62%), Query Frame = 0

Query: 9   EIIKHLRALKVTEEEKTSVFHLKEDEVDLSQRKLENALLCKILTNKKINPEVNSRIKGWI 68
           EI K    L + +E+   +    ED   +    + + L+ K+L+ K++N E         
Sbjct: 47  EIAKLCENLSIKDED-GEIHMASEDVGRIGTEDVNHCLVGKVLSGKRVNREAFK------ 106

Query: 69  KEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLGK 128
              GPW +DK +L++EKP G      L F    FWV  H +P+ C +R  A  +   +G+
Sbjct: 107 ---GPWHFDKCLLVLEKPEGAGEISKLKFNKAEFWVQIHDIPIMCMNRRMAKWLAEQIGE 166

Query: 129 VEQLDLDEELEQYGDCSLRSK-----TKKPDKWIKGS-------------YEKLPDFCYG 188
           V  +++  E  +     LR K     T+   +W++ S             YE+LP+FCY 
Sbjct: 167 V--IEIPTESRECWGKFLRVKVQIDITRPLKRWLRLSLDNSGNIVVVGLKYERLPEFCYA 226

Query: 189 CGLLGHTIKEC---DQAKDATEETLP-YGSWLREPTRLKVQEPSYWFFNGG 218
           CG LGH + EC   +  K+A E + P +GSW+R  +  K +E S    +GG
Sbjct: 227 CGRLGHGVNECSDLEAKKEAMEGSTPRFGSWMRALSSEKSKEKSSSQVSGG 265

BLAST of Lag0041661 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 56.6 bits (135), Expect = 4.4e-08
Identity = 29/114 (25.44%), Postives = 48/114 (42.11%), Query Frame = 0

Query: 68  IKEAGPWFYDKAMLLMEKPRGDSCGDDLDFRYVSFWVHFHKLPLACFSRNSAMEIGSLLG 127
           I   GPW ++  M +++  R      D +F+ + FW+    +PL   +      IG  +G
Sbjct: 75  ILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARIITSIGERMG 134

Query: 128 KVEQLDLDEELEQYGDCSLRSKTKKPDKWIKGSYEKLPDFCYGCGLLGHTIKEC 182
              + +L  ++                  +K  YEKL +FC  CG+L H   EC
Sbjct: 135 LFLETNLGRDVSV----------------LKFQYEKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_024042073.11.5e-2127.08uncharacterized protein LOC112099188 [Citrus clementina][more]
XP_024045326.19.4e-2130.00uncharacterized protein LOC112100347 [Citrus clementina][more]
XP_024036938.11.6e-2027.70uncharacterized protein LOC112096937 [Citrus clementina][more]
XP_024033132.12.7e-2027.08uncharacterized protein LOC112095437 [Citrus clementina][more]
XP_006484927.12.7e-2027.49uncharacterized protein LOC102626623 [Citrus sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S8AC251.7e-2028.16CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1[more]
A0A6J1D7651.7e-2031.44uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A5C7HVU62.3e-2031.94CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01228... [more]
A0A5C7H9Y25.1e-2033.12CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... [more]
A0A5C7IJL65.1e-2029.87CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00425... [more]
Match NameE-valueIdentityDescription
AT3G42140.14.4e-0825.44zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 69..140
e-value: 1.1E-9
score: 37.9
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 154..182
e-value: 2.0E-8
score: 33.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..263
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..324
NoneNo IPR availablePANTHERPTHR31286:SF62SUBFAMILY NOT NAMEDcoord: 67..230
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 67..230
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 168..183
score: 8.910993

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0041661.1Lag0041661.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding