Lag0041649 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0041649
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr13: 23021302 .. 23022003 (-)
RNA-Seq ExpressionLag0041649
SyntenyLag0041649
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGCCAAGAGATTTAGGAGATCAACAGCTTCTTCATCCTCTGCTCCCTTTGATAGGCGTAGATTTATTAGTAAGGATGCTGAAGATGTATATAACTATTACGTCGTATGTAAGGGGTAGTTCCTGAAACAGGGTTAGTTCCAAGTGCCCAAAACCAACCTAAGCTAACCCATAGTATAGCTGAGAGAGGCTGGGGCACGTTCACTAGGCACCCTCAGGCCGTTGTACTCCATATCGTTAGAGAATTTTACGCTAACATGACGGAATGATCCACTACTTTCTTTGTTGGGGTAAAATGATCCCTTTCGACTCGGCCTCGATTAACCAATTCTATGGCCTTCCCAATATTGATAGGGATGGGTACAATGATTACACAAGTAATCACTTTAATGCCTATCAAATTATAGAGCATCTGTGTAGGCCAGGGGCAACTTGGTTAATAAGAAGGGGGAAGCAATAAACTTTAAATCCTCTGATCTGACAGTGGATAATAGAGCATGGCATAGTTTTATGTGTGCCAAACTCTTACTTGTGATGCATTTGAGTGATGTAACAAAGGAAAGAGCAGCTCTGTTATTTTCTTTAGCGGTCGACCACAATGTAGACGTACGAAAAGTTATATATTCTTCCATGCGTCGGATTCGCAGTGGAACGACCACAGTAGGTCTAGGGCACCCTTCCCTCATCATAGCAATCTGA

mRNA sequence

ATGACTGCCAAGAGATTTAGGAGATCAACAGCTTCTTCATCCTCTGCTCCCTTTGATAGGCGTAGATTTATTAGTAAGGATGCTGAAGATGTATATAACTATTACGTCGCCAGGGGCAACTTGGTTAATAAGAAGGGGGAAGCAATAAACTTTAAATCCTCTGATCTGACAGTGGATAATAGAGCATGGCATAGTTTTATGTGTGCCAAACTCTTACTTGTGATGCATTTGAGTGATGTAACAAAGGAAAGAGCAGCTCTGTTATTTTCTTTAGCGGTCGACCACAATGTAGACGTACGAAAAGTTATATATTCTTCCATGCGTCGGATTCGCAGTGGAACGACCACAGTAGGTCTAGGGCACCCTTCCCTCATCATAGCAATCTGA

Coding sequence (CDS)

ATGACTGCCAAGAGATTTAGGAGATCAACAGCTTCTTCATCCTCTGCTCCCTTTGATAGGCGTAGATTTATTAGTAAGGATGCTGAAGATGTATATAACTATTACGTCGCCAGGGGCAACTTGGTTAATAAGAAGGGGGAAGCAATAAACTTTAAATCCTCTGATCTGACAGTGGATAATAGAGCATGGCATAGTTTTATGTGTGCCAAACTCTTACTTGTGATGCATTTGAGTGATGTAACAAAGGAAAGAGCAGCTCTGTTATTTTCTTTAGCGGTCGACCACAATGTAGACGTACGAAAAGTTATATATTCTTCCATGCGTCGGATTCGCAGTGGAACGACCACAGTAGGTCTAGGGCACCCTTCCCTCATCATAGCAATCTGA

Protein sequence

MTAKRFRRSTASSSSAPFDRRRFISKDAEDVYNYYVARGNLVNKKGEAINFKSSDLTVDNRAWHSFMCAKLLLVMHLSDVTKERAALLFSLAVDHNVDVRKVIYSSMRRIRSGTTTVGLGHPSLIIAI
Homology
[Close]
BLAST of Lag0041649 vs. NCBI nr
Match: KAA0033353.1 (putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa] >TYJ96637.1 putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa])

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-16
Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 46  GEAINFKSSDLTVDNRAWHSFMCAKLLLVMHLSDVTKERAALLFSLAVDHNVDVRKVIYS 105
           GE I FKSS+LTV N+ WH F+CAKLL V H S VTKERA LL+++A   +VDV KVI+ 
Sbjct: 153 GEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIHK 212

Query: 106 SMRRIRSGTTTVGLGHPSLIIAI 129
           S+  IR    T GLGH SLI A+
Sbjct: 213 SLCNIRKSGMTGGLGHSSLITAL 235

[Close]
BLAST of Lag0041649 vs. NCBI nr
Match: XP_008458668.1 (PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 1.6e-16
Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 0 

Query: 46  GEAINFKSSDLTVDNRAWHSFMCAKLLLVMHLSDVTKERAALLFSLAVDHNVDVRKVIYS 105
           GE I FKSS+LTV N+ WH F+CAKLL V H S VTKERA LL+++A   +VDV KVI+ 
Sbjct: 91  GEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIHK 150

Query: 106 SMRRIRSGTTTVGLGHPSLIIAI 129
           S+  IR    T GLGH SLI A+
Sbjct: 151 SLCNIRKSGMTGGLGHSSLITAL 173

[Close]
BLAST of Lag0041649 vs. NCBI nr
Match: KGN46897.1 (hypothetical protein Csa_020731 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 3.5e-16
Identity = 49/83 (59.04%), Postives = 58/83 (69.88%), Query Frame = 0 

Query: 46  GEAINFKSSDLTVDNRAWHSFMCAKLLLVMHLSDVTKERAALLFSLAVDHNVDVRKVIYS 105
           GE I FKSS+LTV N+ WH F+CAKLL V H S VTKERA LL+++A   +VDV KVI  
Sbjct: 153 GEPIRFKSSNLTVSNQVWHKFICAKLLPVAHTSSVTKERAILLYAIATKRSVDVGKVIQK 212

Query: 106 SMRRIRSGTTTVGLGHPSLIIAI 129
           S+  IR    T GLGH SLI A+
Sbjct: 213 SLCNIRKSGMTGGLGHSSLITAL 235

[Close]
BLAST of Lag0041649 vs. NCBI nr
Match: PIN05057.1 (hypothetical protein CDL12_22406 [Handroanthus impetiginosus])

HSP 1 Score: 74.7 bits (182), Expect = 6.4e-10
Identity = 52/162 (32.10%), Postives = 78/162 (48.15%), Query Frame = 0 

Query: 2   TAKRFRRSTASSSSAPFDRRRFISKDAEDVYN---------------------------- 61
           T+KR R++  +SSS  FDRR+FIS++ ED YN                            
Sbjct: 6   TSKR-RQTNIASSSQDFDRRQFISQEVEDYYNGRLADKAAIRERGIQGVDEIAKILREFY 65

Query: 62  ---------YYVARGNLVNKKGEAINFKSSDLTVDNRAWHSFMCAKLLLVMHLSDVTKER 121
                    +YV     +++  + I+F  + LTV    W  F+  +LL   H SD+TKER
Sbjct: 66  ANLKFTDQRHYVVLVRTLSRLNKPIHFFHTKLTVAADHWLRFISTRLLPTTHTSDITKER 125

Query: 122 AALLFSLAVDHNVDVRKVIYSSMRRIRSGTTTVGLGHPSLII 127
           A ++F++  D   D+ + ++ S+     G  TVGL HPSLII
Sbjct: 126 AVMIFAILTDVPFDIGRFLHRSIWNSAMGGLTVGLYHPSLII 166

[Close]
BLAST of Lag0041649 vs. NCBI nr
Match: PKU67230.1 (hypothetical protein MA16_Dca018724 [Dendrobium catenatum])

HSP 1 Score: 68.9 bits (167), Expect = 3.5e-08
Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = 0 

Query: 44  KKGEAINFKSSDLTVDNRAWHSFMCAKLLLVMHLSDVTKERAALLFSLAVDHNVDVRKVI 103
           +K + I F +S LT  ++ WH F+   LL      +VTKE+A L +++ V + +DV K I
Sbjct: 74  RKDKIIKFPTSYLTQLSKVWHYFISTHLLPSKKKGEVTKEQAMLNYAIQVGYTIDVEKHI 133

Query: 104 YSSMRRIRSGTTTVGLGHPSLIIAI 129
           Y S+  I  G T+VGLGHPSLI A+
Sbjct: 134 YYSLNYIIRGITSVGLGHPSLIHAL 158

The following BLAST results are available for this feature:
BLAST of Lag0041649 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0033353.11.6e-1659.04putative S-locus lectin protein kinase family protein [Cucumis melo var. makuwa]... [more]
XP_008458668.11.6e-1659.04PREDICTED: uncharacterized protein LOC103497996 [Cucumis melo][more]
KGN46897.13.5e-1659.04hypothetical protein Csa_020731 [Cucumis sativus][more]
PIN05057.16.4e-1032.10hypothetical protein CDL12_22406 [Handroanthus impetiginosus][more]
PKU67230.13.5e-0843.53hypothetical protein MA16_Dca018724 [Dendrobium catenatum][more]
BLAST of Lag0041649 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0041649.1Lag0041649.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006561 proline biosynthetic process
cellular_component GO:0005829 cytosol
molecular_function GO:0004349 glutamate 5-kinase activity