Lag0041486 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0041486
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Locationchr13: 18787185 .. 18790161 (+)
RNA-Seq ExpressionLag0041486
SyntenyLag0041486
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGATTTGGGTACTTTGCGATATTTTCTTGGCCTTGAAATCTCTCATACTTCTAATGGTTTTTTGGTACATCAAACTAATTATACCAGGGATGTTCTCAAACGTTTTGGTATGCTTAATGAAAAATCTTGTGGTACTTCTTTGGCTTTACAGTCTCCTACTGATGCTGGAAATGTTTGCTCTCCTGATGATAGTCGTAATTACAGGGCTCTTATTGGTGCTCTTCATTACTGGAATTTTAGTCTACGAGATATCTCGTTTGTTGTTAGCAAGCTTTCTCAATTTCTGCATTCTCCTCATGATTCTCATCTTGTGGCTGCTAAAAGAGTGTTGCGTTATCTAGCTGGTTCTATTGGCTTCAGCATTATGTTTCGAAAAGGATCTTCTTCTTTTGCTCGGTTGCATGCTTATTCTTATTCAGATTGGGCTGGTGACCCTCTTTATCGTTGTTCCACGTCTGGCTTTGTAATTTTCCTTGGTTCTAATCTTATTTCATGGAGATCTAAGAAACAATCTACCGTTTCTCGTAGCTCTCTACAGAGGCTGAATAACGAGCATTAGCTTCCACTACAGCTAAAGTTTGTTGGATTCATCAGGTGTGTCAAGATCTTCATGTCTATAGTTATGAACCTCCTATTTTATTATGTGACAATATCTCTGCTATTCAATTGGCTCGTGATCCTGCTTTTCATGGTCGTACTAAGCATGTGGAGATTGATTTCCACTTTGTTCGTGAACAAGTTGTTCGAAAAAGATTTCGAGCTTCGGTATGTTTCTTCTGCCCAGCAACTTGCTGATCTTTTCACCAAGGCTCACACTAGCTTATGACTTGCTACTCTTTGTTCCAAACTCATGTCCTCTTCAGTGGCATTCATTTGAGGAGGGATGATAACTGATTATTGTTGATTATTGTTATTTTGTTGTATATTTACACAATTAGTTATTCATTTGTTATCTTTAGTATTTTTAGGTTTACTCCGTTTCTATAATCTGTACTCTTCAGCATTTAAAAGGCTTGTATTATGTTTTTTGAGATATTAAAAGATATTCTCTCAAAGTTTGAAAGATTATTTACAACCCGTACACTTGCGGTAAGTAATTTTTGCAGCATAATTCCATCGTAAATTGGGATTTGAATTTTGTTTTTGTAATGAATGGTGTCGTTAATGAGACATAGGACATATTAGGAATTTCCTATATAGTTAAAAGATAATAATTTGATTAAAGACAGTTACAAATTTAGTCAATTTTAGGTCAAAGCGAGCCTAGTTCAGCGGTAATTGGCATGTACCCTCAACCATGAGGTCAGAGGTTCGAATCCCCCACCCTCAAATGTTGATGTACTAAAAAAAAAAGAAAAAAAATTAGTCCATTTTAGTATGTGCCTCTTTAGTTTCTAAAGTACATGAAAAAAAAAAATCTTTATCTTTATCTTTACTACTTAAAAAATGGCTAACTTGGAGAATCATTTTTGGACTATTTTGTCCAAATACAAATTCTTTTATTCCATATGTGTCCTTTAATTAATTATTATTTCTATTTTTAAAATGGTTTTAAATTGATAAATAATGTGTTAATAGGAATTTGAATTTTTTTTTTTTTTTTTTTAATGTTTCAAATTTTTTTTATACTCTTCAATATGTTAACGTTAATTAATTTAGTAAAACTGTTGGTTTTTGTTGTGCCAGCAGAATTTAGACTTTTCTTTTATCTTTTATTTATTTTTCTAATTCATTTATACCTACTTTCTTTTATACTTTTTTAATATGTTAATGTTAATTAATTAAGTAAAACTTTTGGTTTTTTTTACCGGCAAAATTTAGATTTTTCTTCTCTTTCTCTCTCTCTCTTTTTTTTCTAATTCATTTACACCTTCTTTAATATATGTTAATTATTAATTAATTTAATATGTTATTTATTAAGGGATTAATTTGGTACACTCATTTGGTTCCTTTATTTTTTTTTTAAACGGTAGACTTAATTTTTTTTCTAATTTATTTATACTTGTTGAAGGAGAAATTTCGGCCAATCACAAATTGCCACGTCATTAATATAAATTAATGATAAAATAAATTTGGGACCAATTACACAATTACACGTGTGCCTAAATTAAATTAATAGACATTAAAATTCGGTAAATCAAAGAATGCCACTTGTCTATTAGTGATCGATCGGATGACATAAGCCAAGTCCAATCAAATTATGCCATGTGGCAATTGGACCCAAGCCCAAACCCATATGGGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATTTGAGAGGGGATTCAGCCAGAGGGAGAGAACTCAGAGTCCAGAGCATTCTACCAGAGTCCAGAGTCGGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCTGATCCAACAGATCATCAAGCTAACAGGCCGATCCAAGAGATCAACAGGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGATCAAGAGGATCAATAAGTCAGCAGACCGATCATCCAAAAGGATCAAAAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTTAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAAATCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCACCAGGTTGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAATATCAACAAGCCAACAAGCTGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAACCAACAAGCTGA

mRNA sequence

ATGACTGATTTGGGTACTTTGCGATATTTTCTTGGCCTTGAAATCTCTCATACTTCTAATGGTTTTTTGGTACATCAAACTAATTATACCAGGGATGTTCTCAAACGTTTTGGTATGCTTAATGAAAAATCTTGTGGTACTTCTTTGGCTTTACAGTCTCCTACTGATGCTGGAAATGTTTGCTCTCCTGATGATAGTCGTAATTACAGGGCTCTTATTGGTGCTCTTCATTACTGGAATTTTAGTCTACGAGATATCTCGTTTGTTGTTAGCAAGCTTTCTCAATTTCTGCATTCTCCTCATGATTCTCATCTTGTGGCTGCTAAAAGAGTGTTGCGTTATCTAGCTGGTTCTATTGGCTTCAGCATTATGTTTCGAAAAGGATCTTCTTCTTTTGCTCGGTTGCATGCTTATTCTTATTCAGATTGGGCTGGTGACCCTCTTTATCGTTGTTCCACGTCTGGCTTTGTAATTTTCCTTGGTTCTAATCTTATTTCATGGAGATCTAAGAAACAATCTACCGTGTGTCAAGATCTTCATGTCTATAGTTATGAACCTCCTATTTTATTATGTGACAATATCTCTGCTATTCAATTGGCTCGTGATCCTGCTTTTCATGGTCGTACTAAGCATGTGGAGATTGATTTCCACTTTGTTCGTGAACAAGTTGTTCGAAAAAGATTTCGAGCTTCGGTCAAAGCGAGCCTAGTTCAGCGGCCGATCCAAGAGATCAACAGGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGATCAAGAGGATCAATAAGTCAGCAGACCGATCATCCAAAAGGATCAAAAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTTAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAAATCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCACCAGGTTGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAATATCAACAAGCCAACAAGCTGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAACCAACAAGCTGA

Coding sequence (CDS)

ATGACTGATTTGGGTACTTTGCGATATTTTCTTGGCCTTGAAATCTCTCATACTTCTAATGGTTTTTTGGTACATCAAACTAATTATACCAGGGATGTTCTCAAACGTTTTGGTATGCTTAATGAAAAATCTTGTGGTACTTCTTTGGCTTTACAGTCTCCTACTGATGCTGGAAATGTTTGCTCTCCTGATGATAGTCGTAATTACAGGGCTCTTATTGGTGCTCTTCATTACTGGAATTTTAGTCTACGAGATATCTCGTTTGTTGTTAGCAAGCTTTCTCAATTTCTGCATTCTCCTCATGATTCTCATCTTGTGGCTGCTAAAAGAGTGTTGCGTTATCTAGCTGGTTCTATTGGCTTCAGCATTATGTTTCGAAAAGGATCTTCTTCTTTTGCTCGGTTGCATGCTTATTCTTATTCAGATTGGGCTGGTGACCCTCTTTATCGTTGTTCCACGTCTGGCTTTGTAATTTTCCTTGGTTCTAATCTTATTTCATGGAGATCTAAGAAACAATCTACCGTGTGTCAAGATCTTCATGTCTATAGTTATGAACCTCCTATTTTATTATGTGACAATATCTCTGCTATTCAATTGGCTCGTGATCCTGCTTTTCATGGTCGTACTAAGCATGTGGAGATTGATTTCCACTTTGTTCGTGAACAAGTTGTTCGAAAAAGATTTCGAGCTTCGGTCAAAGCGAGCCTAGTTCAGCGGCCGATCCAAGAGATCAACAGGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGACCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAAGATCAACAAGCCAACCGATCGATCAAGAGGATCAATAAGTCAGCAGACCGATCATCCAAAAGGATCAAAAAGCTAACAAGTCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAAGTTAACAGGCCGATCATCCAAGAAGATCAACAAGCCAACAAATCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATTCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCACCAGGTTGATCATCCAAGAAGATCAACAAGCCAACAAGCCGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAATATCAACAAGCCAACAAGCTGATCCAAGAGATCATCAAGCCAACAGGCCGATCATCCAAGAAGATTAACAAACCAACAAGCTGA

Protein sequence

MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVREQVVRKRFRASVKASLVQRPIQEINRPTDRSRRSTSQQADHPRRSTSQPTDQEDQQVSRPIIQEDQQANRSIKRINKSADRSSKRIKKLTSRSNRSSSQQADPRDHQVNRPIIQEDQQANKSIQEIIKPTGRSFKKINKPTSRSKRSSSHQVDHPRRSTSQQADPRDHQANRPIIQEYQQANKLIQEIIKPTGRSSKKINKPTS
Homology
BLAST of Lag0041486 vs. NCBI nr
Match: XP_022143489.1 (uncharacterized protein LOC111013365 [Momordica charantia])

HSP 1 Score: 292.0 bits (746), Expect = 8.5e-75
Identity = 152/251 (60.56%), Postives = 183/251 (72.91%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           MTDL  L+YFLGLEIS+T+NG  + Q  YTRDVL+RFG+L+ K C T ++L S TD G  
Sbjct: 129 MTDLEDLKYFLGLEISYTNNGLSISQAKYTRDVLQRFGILSAKPCTTPMSLSSTTDIGAP 188

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
           CS +D RNYR+LIG+LHY  F+  DI+F V KLSQF+H+P +SHLVAAKR+LRYL+GS+ 
Sbjct: 189 CSIEDIRNYRSLIGSLHYLTFTRPDIAFAVGKLSQFMHAPCESHLVAAKRILRYLSGSLQ 248

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV----- 180
           FSIMF++ SS+  RLHA+S SDWAGD   R STSGFVIFLGSN IS  SKKQSTV     
Sbjct: 249 FSIMFQRSSSNL-RLHAFSDSDWAGDSHDRRSTSGFVIFLGSNPISCGSKKQSTVSRSST 308

Query: 181 --------------------CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEID 227
                                +DLHV+S + P+L CDN SAIQLA++P FHGRTKHVEID
Sbjct: 309 EAEYRCLASTAAELFWVRQLLKDLHVFSTQSPVLWCDNASAIQLAKNPVFHGRTKHVEID 368

BLAST of Lag0041486 vs. NCBI nr
Match: XP_022152156.1 (uncharacterized protein LOC111019945 [Momordica charantia])

HSP 1 Score: 278.9 bits (712), Expect = 7.4e-71
Identity = 141/251 (56.18%), Postives = 176/251 (70.12%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           MTDLG L YFLGLEI++TS G LV+Q  YTRD+LKRFGML+ K C T LAL + +D G  
Sbjct: 121 MTDLGNLHYFLGLEITYTSGGILVNQAKYTRDILKRFGMLSAKPCSTPLALVNSSDLGEP 180

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
           CS +D+RNYR+LIGA +Y  FS  DI+F VSKLSQ +H P   HL AAKR+LRYL G++ 
Sbjct: 181 CSTEDARNYRSLIGAPNYLTFSRPDIAFSVSKLSQHMHKPFVYHLTAAKRILRYLNGTVD 240

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV----- 180
             ++FR+  ++  +LHA+S SDWAGD + R ST+G VIFLGSN ISW +KKQ+TV     
Sbjct: 241 LGLVFRRHPTASLQLHAFSDSDWAGDTIDRRSTTGLVIFLGSNPISWGAKKQTTVSRSST 300

Query: 181 --------------------CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEID 227
                                +DL V+S++ PIL CDNIS IQLA +P FHG+TKHVEID
Sbjct: 301 EAEYRALASTTAELSWLRQILKDLGVFSFQQPILWCDNISXIQLAHNPVFHGQTKHVEID 360

BLAST of Lag0041486 vs. NCBI nr
Match: XP_022143496.1 (uncharacterized protein LOC111013373 [Momordica charantia])

HSP 1 Score: 227.6 bits (579), Expect = 2.0e-55
Identity = 125/251 (49.80%), Postives = 151/251 (60.16%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           MTDLG L+YFLGLEIS +S G LVHQT YTRD+L+RFGML  KSC T LAL +    G  
Sbjct: 118 MTDLGALKYFLGLEISCSSQGILVHQTKYTRDILQRFGMLGAKSCATPLALVTAATTGPS 177

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
           CS +D++NYRALIGAL+Y  FS  DISF +SKLSQF+H P D HL  AKR          
Sbjct: 178 CSINDAKNYRALIGALNYLTFSRPDISFXISKLSQFMHHPFDXHLTVAKRT--------- 237

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST------ 180
                R G                 DP  R STS FV+FLG N I W +KKQ+T      
Sbjct: 238 -----RLGIPQIV----------VRDPTDRRSTSSFVMFLGHNPIYWGAKKQTTLSXSST 297

Query: 181 -------------------VCQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEID 227
                              + +DL+++S +PPIL CD++SAIQLAR+P FH +TKHV ID
Sbjct: 298 EAEYRALASIAAELSWIRQLLKDLYIFSDKPPILWCDDVSAIQLARNPVFHAQTKHVAID 344

BLAST of Lag0041486 vs. NCBI nr
Match: TQD72972.1 (hypothetical protein C1H46_041487 [Malus baccata])

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-51
Identity = 116/247 (46.96%), Postives = 149/247 (60.32%), Query Frame = 0

Query: 3   DLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCS 62
           DLG L YFLGLE+  +S+G  +HQT Y  D+L+R  M   K C T L  Q    +G++ S
Sbjct: 323 DLGPLHYFLGLEVQRSSHGIFLHQTKYLLDLLQRTNMEGAKPCCTPLGSQKLDHSGSLLS 382

Query: 63  PDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFS 122
             +S  YR+L+G L Y  ++  DI+F V++L QF+H+P D H  AAKRVLR+L GS    
Sbjct: 383 --NSTEYRSLVGGLQYLTWTRPDIAFAVNQLCQFMHAPRDQHFQAAKRVLRFLKGSFSQG 442

Query: 123 IMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVC------ 182
           + F KGS     L AYS +DWAG P  R ST+G+ +FLGSNLISW +KKQSTV       
Sbjct: 443 LWFTKGS---VDLSAYSDADWAGCPFDRRSTTGYCVFLGSNLISWSAKKQSTVARSSTEA 502

Query: 183 -------------------QDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFH 225
                              +DLH    + P L CDNISAI LA +P FH RTKHVEID+H
Sbjct: 503 EYRSLAHTAAELTWVCKILRDLHCSIPKLPTLWCDNISAISLASNPVFHARTKHVEIDYH 562

BLAST of Lag0041486 vs. NCBI nr
Match: XP_022154318.1 (uncharacterized protein LOC111021613 [Momordica charantia])

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-51
Identity = 107/193 (55.44%), Postives = 135/193 (69.95%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           MTDLG LRYFLGLE+SH+S G  V+Q  Y RDVL RFGML  K C T++AL +P+D G+ 
Sbjct: 1   MTDLGVLRYFLGLEVSHSSIGIYVNQAKYARDVLIRFGMLASKPCHTTIALTAPSDVGSP 60

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
           C+ +D+ NY A++GAL Y  FS  DI+F V KLSQ +H+P  SHL+ AKRVLRY+ GS+ 
Sbjct: 61  CTVEDAHNYGAMVGALQYLTFSRPDIAFSVRKLSQHMHAPFSSHLITAKRVLRYINGSLH 120

Query: 121 FSIMFRKGSS--SFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQD 180
            S++F+KG S     RL A+S SDWAGDP YR ST+GFV+FL SN ISW  KKQ+TV + 
Sbjct: 121 VSLLFKKGGSVDEALRLRAFSDSDWAGDPSYRRSTTGFVVFLDSNPISWAVKKQTTVSRS 180

Query: 181 LHVYSYEPPILLC 192
                Y    + C
Sbjct: 181 STEAEYRALAINC 193

BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 7.5e-42
Identity = 96/269 (35.69%), Postives = 136/269 (50.56%), Query Frame = 0

Query: 7    LRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDS 66
            L YFLG+E      G  + Q  YT D+L R  ML  K   T +A        +     D 
Sbjct: 1166 LHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDP 1225

Query: 67   RNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFR 126
              YR ++G+L Y  F+  D+S+ V++LSQ++H P D H  A KRVLRYLAG+    I  +
Sbjct: 1226 TEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLK 1285

Query: 127  KGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQ--------- 186
            KG++    LHAYS +DWAGD     ST+G++++LG + ISW SKKQ  V +         
Sbjct: 1286 KGNT--LSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRS 1345

Query: 187  ----------------DLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVRE 246
                            +L +    PP++ CDN+ A  L  +P FH R KH+ +D+HF+R 
Sbjct: 1346 VANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIRN 1405

Query: 247  QVVRKRFRASVKASLVQRPIQEINRPTDR 251
            QV     R  V  S   +    + +P  R
Sbjct: 1406 QVQSGALRV-VHVSTHDQLADTLTKPLSR 1431

BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-41
Identity = 96/270 (35.56%), Postives = 137/270 (50.74%), Query Frame = 0

Query: 7    LRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNVCSPDDS 66
            L YFLG+E      G  + Q  Y  D+L R  M+  K   T +A        +     D 
Sbjct: 1183 LHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDP 1242

Query: 67   RNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFR 126
              YR ++G+L Y  F+  DIS+ V++LSQF+H P + HL A KR+LRYLAG+    I  +
Sbjct: 1243 TEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLK 1302

Query: 127  KGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQ--------- 186
            KG++    LHAYS +DWAGD     ST+G++++LG + ISW SKKQ  V +         
Sbjct: 1303 KGNT--LSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRS 1362

Query: 187  ----------------DLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEIDFHFVRE 246
                            +L +    PP++ CDN+ A  L  +P FH R KH+ ID+HF+R 
Sbjct: 1363 VANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRN 1422

Query: 247  QVVRKRFRASVKASLVQRPIQEINRPTDRS 252
            QV     R  V  S   +    + +P  R+
Sbjct: 1423 QVQSGALRV-VHVSTHDQLADTLTKPLSRT 1449

BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.2e-28
Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           M DLG + YFLG++I    +G  + QT Y   +L   GML+ K   T L L+  +     
Sbjct: 33  MKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA 92

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
             PD S ++R+++GAL Y   +  DIS+ V+ + Q +H P  +     KRVLRY+ G+I 
Sbjct: 93  KYPDPS-DFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIF 152

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLH 180
             +   K S     + A+  SDWAG    R ST+GF  FLG N+ISW +K+Q TV +   
Sbjct: 153 HGLYIHKNSK--LNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSST 212

Query: 181 VYSYEPPILLCDNI--SAIQLARDPA 205
              Y    L    +  S+   +RDP+
Sbjct: 213 ETEYRALALTAAELTWSSASRSRDPS 235

BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 113.6 bits (283), Expect = 5.4e-24
Identity = 78/257 (30.35%), Postives = 119/257 (46.30%), Query Frame = 0

Query: 1    MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSL-------ALQS 60
            MTDL  +++F+G+ I    +   + Q+ Y + +L +F M N  +  T L        L S
Sbjct: 1114 MTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS 1173

Query: 61   PTDAGNVCSPDDSRNYRALIGALHYWNFSLR-DISFVVSKLSQFLHSPHDSHLVAAKRVL 120
              D    C        R+LIG L Y     R D++  V+ LS++    +       KRVL
Sbjct: 1174 DEDCNTPC--------RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVL 1233

Query: 121  RYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVI-FLGSNLISWRSKK 180
            RYL G+I   ++F+K  +   ++  Y  SDWAG  + R ST+G++      NLI W +K+
Sbjct: 1234 RYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKR 1293

Query: 181  QSTVCQDLHVYSY------------------------EPPILLC-DNISAIQLARDPAFH 224
            Q++V        Y                        E PI +  DN   I +A +P+ H
Sbjct: 1294 QNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCH 1353

BLAST of Lag0041486 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.7e-22
Identity = 86/290 (29.66%), Postives = 134/290 (46.21%), Query Frame = 0

Query: 1    MTDLGTLRYFLGLEI--SHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLA-------L 60
            M DLG  +  LG++I    TS    + Q  Y   VL+RF M N K   T LA        
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094

Query: 61   QSPT---DAGNVCSPDDSRNYRALIGALHYWNFSLR-DISFVVSKLSQFLHSPHDSHLVA 120
              PT   + GN+        Y + +G+L Y     R DI+  V  +S+FL +P   H  A
Sbjct: 1095 MCPTTVEEKGNMAKVP----YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEA 1154

Query: 121  AKRVLRYLAGSIGFSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISW 180
             K +LRYL G+ G  + F     S   L  Y+ +D AGD   R S++G++       ISW
Sbjct: 1155 VKWILRYLRGTTGDCLCF---GGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISW 1214

Query: 181  RSKKQSTVC-------------------------QDLHVYSYEPPILLCDNISAIQLARD 240
            +SK Q  V                          Q+L ++  E  ++ CD+ SAI L+++
Sbjct: 1215 QSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKE-YVVYCDSQSAIDLSKN 1274

Query: 241  PAFHGRTKHVEIDFHFVREQVVRKRFRASVKASLVQRPIQEINRPTDRSR 253
              +H RTKH+++ +H++RE V  +  +  +K S  + P   + +   R++
Sbjct: 1275 SMYHARTKHIDVRYHWIREMVDDESLKV-LKISTNENPADMLTKVVPRNK 1315

BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A6J1CPG5 (uncharacterized protein LOC111013365 OS=Momordica charantia OX=3673 GN=LOC111013365 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.1e-75
Identity = 152/251 (60.56%), Postives = 183/251 (72.91%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           MTDL  L+YFLGLEIS+T+NG  + Q  YTRDVL+RFG+L+ K C T ++L S TD G  
Sbjct: 129 MTDLEDLKYFLGLEISYTNNGLSISQAKYTRDVLQRFGILSAKPCTTPMSLSSTTDIGAP 188

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
           CS +D RNYR+LIG+LHY  F+  DI+F V KLSQF+H+P +SHLVAAKR+LRYL+GS+ 
Sbjct: 189 CSIEDIRNYRSLIGSLHYLTFTRPDIAFAVGKLSQFMHAPCESHLVAAKRILRYLSGSLQ 248

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV----- 180
           FSIMF++ SS+  RLHA+S SDWAGD   R STSGFVIFLGSN IS  SKKQSTV     
Sbjct: 249 FSIMFQRSSSNL-RLHAFSDSDWAGDSHDRRSTSGFVIFLGSNPISCGSKKQSTVSRSST 308

Query: 181 --------------------CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEID 227
                                +DLHV+S + P+L CDN SAIQLA++P FHGRTKHVEID
Sbjct: 309 EAEYRCLASTAAELFWVRQLLKDLHVFSTQSPVLWCDNASAIQLAKNPVFHGRTKHVEID 368

BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A6J1DGS4 (uncharacterized protein LOC111019945 OS=Momordica charantia OX=3673 GN=LOC111019945 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 3.6e-71
Identity = 141/251 (56.18%), Postives = 176/251 (70.12%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           MTDLG L YFLGLEI++TS G LV+Q  YTRD+LKRFGML+ K C T LAL + +D G  
Sbjct: 121 MTDLGNLHYFLGLEITYTSGGILVNQAKYTRDILKRFGMLSAKPCSTPLALVNSSDLGEP 180

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
           CS +D+RNYR+LIGA +Y  FS  DI+F VSKLSQ +H P   HL AAKR+LRYL G++ 
Sbjct: 181 CSTEDARNYRSLIGAPNYLTFSRPDIAFSVSKLSQHMHKPFVYHLTAAKRILRYLNGTVD 240

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTV----- 180
             ++FR+  ++  +LHA+S SDWAGD + R ST+G VIFLGSN ISW +KKQ+TV     
Sbjct: 241 LGLVFRRHPTASLQLHAFSDSDWAGDTIDRRSTTGLVIFLGSNPISWGAKKQTTVSRSST 300

Query: 181 --------------------CQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEID 227
                                +DL V+S++ PIL CDNIS IQLA +P FHG+TKHVEID
Sbjct: 301 EAEYRALASTTAELSWLRQILKDLGVFSFQQPILWCDNISXIQLAHNPVFHGQTKHVEID 360

BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A6J1CQE8 (uncharacterized protein LOC111013373 OS=Momordica charantia OX=3673 GN=LOC111013373 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 9.5e-56
Identity = 125/251 (49.80%), Postives = 151/251 (60.16%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           MTDLG L+YFLGLEIS +S G LVHQT YTRD+L+RFGML  KSC T LAL +    G  
Sbjct: 118 MTDLGALKYFLGLEISCSSQGILVHQTKYTRDILQRFGMLGAKSCATPLALVTAATTGPS 177

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
           CS +D++NYRALIGAL+Y  FS  DISF +SKLSQF+H P D HL  AKR          
Sbjct: 178 CSINDAKNYRALIGALNYLTFSRPDISFXISKLSQFMHHPFDXHLTVAKRT--------- 237

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST------ 180
                R G                 DP  R STS FV+FLG N I W +KKQ+T      
Sbjct: 238 -----RLGIPQIV----------VRDPTDRRSTSSFVMFLGHNPIYWGAKKQTTLSXSST 297

Query: 181 -------------------VCQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEID 227
                              + +DL+++S +PPIL CD++SAIQLAR+P FH +TKHV ID
Sbjct: 298 EAEYRALASIAAELSWIRQLLKDLYIFSDKPPILWCDDVSAIQLARNPVFHAQTKHVAID 344

BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A2N9F8I7 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11071 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.8e-55
Identity = 114/251 (45.42%), Postives = 157/251 (62.55%), Query Frame = 0

Query: 1    MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
            + DLG L YFLGL++ + S GF VHQT Y  D+L+RF M N K   T  +  S       
Sbjct: 971  LKDLGPLHYFLGLQLHYHSTGFSVHQTKYASDLLQRFAMTNCKPSSTPYSSTSRLTKDQG 1030

Query: 61   CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
                D  ++R+L+GAL Y  F+  D+SF V+++ QF+HSP D+HL+AAKR+LRY+ GS+ 
Sbjct: 1031 TPLVDPTSFRSLVGALQYLTFTRPDLSFAVNQVCQFMHSPTDTHLIAAKRILRYVKGSLS 1090

Query: 121  FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST------ 180
              ++F+ GS     L AY+ +DWAGDP+ R STSG+V+FLGS  I+W SKKQ T      
Sbjct: 1091 SGLLFQPGS---LNLQAYADADWAGDPIDRRSTSGYVVFLGSTPITWVSKKQCTVSRSST 1150

Query: 181  -------------------VCQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEID 227
                               V +DL ++   PPIL CDN+SA+ LA +P FH RTKH+E+D
Sbjct: 1151 EAEYRSLASATAEVFWIRMVLKDLGIFLPNPPILWCDNLSALALASNPVFHARTKHIEVD 1210

BLAST of Lag0041486 vs. ExPASy TrEMBL
Match: A0A2N9HLR0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40770 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 2.8e-55
Identity = 114/251 (45.42%), Postives = 157/251 (62.55%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           + DLG L YFLGL++ + S GF VHQT Y  D+L+RF M N K   T  +  S       
Sbjct: 655 LKDLGPLHYFLGLQLHYHSTGFSVHQTKYASDLLQRFAMTNCKPSSTPYSSTSRLTKDQG 714

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
               D  ++R+L+GAL Y  F+  D+SF V+++ QF+HSP D+HL+AAKR+LRY+ GS+ 
Sbjct: 715 TPLVDPTSFRSLVGALQYLTFTRPDLSFAVNQVCQFMHSPTDTHLIAAKRILRYVKGSLS 774

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQST------ 180
             ++F+ GS     L AY+ +DWAGDP+ R STSG+V+FLGS  I+W SKKQ T      
Sbjct: 775 SGLLFQPGS---LNLQAYADADWAGDPIDRRSTSGYVVFLGSTPITWVSKKQCTVSRSST 834

Query: 181 -------------------VCQDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEID 227
                              V +DL ++   PPIL CDN+SA+ LA +P FH RTKH+E+D
Sbjct: 835 EAEYRSLASATAEVFWIRMVLKDLGIFLPNPPILWCDNLSALALASNPVFHARTKHIEVD 894

BLAST of Lag0041486 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 144.8 bits (364), Expect = 1.6e-34
Identity = 86/249 (34.54%), Postives = 130/249 (52.21%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           + DLG L+YFLGLEI+ ++ G  + Q  Y  D+L   G+L  K     +       A + 
Sbjct: 310 LRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
               D++ YR LIG L Y   +  DISF V+KLSQF  +P  +H  A  ++L Y+ G++G
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVG 429

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVC---- 180
             + +   S +  +L  +S + +      R ST+G+ +FLG++LISW+SKKQ  V     
Sbjct: 430 QGLFY--SSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 489

Query: 181 ---------------------QDLHVYSYEPPILLCDNISAIQLARDPAFHGRTKHVEID 225
                                ++L +   +P +L CDN +AI +A +  FH RTKH+E D
Sbjct: 490 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 549

BLAST of Lag0041486 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 4.4e-29
Identity = 74/206 (35.92%), Postives = 108/206 (52.43%), Query Frame = 0

Query: 1   MTDLGTLRYFLGLEISHTSNGFLVHQTNYTRDVLKRFGMLNEKSCGTSLALQSPTDAGNV 60
           M DLG + YFLG++I    +G  + QT Y   +L   GML+ K   T L L+  +     
Sbjct: 33  MKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTA 92

Query: 61  CSPDDSRNYRALIGALHYWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIG 120
             PD S ++R+++GAL Y   +  DIS+ V+ + Q +H P  +     KRVLRY+ G+I 
Sbjct: 93  KYPDPS-DFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIF 152

Query: 121 FSIMFRKGSSSFARLHAYSYSDWAGDPLYRCSTSGFVIFLGSNLISWRSKKQSTVCQDLH 180
             +   K S     + A+  SDWAG    R ST+GF  FLG N+ISW +K+Q TV +   
Sbjct: 153 HGLYIHKNSK--LNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSST 212

Query: 181 VYSYEPPILLCDNI--SAIQLARDPA 205
              Y    L    +  S+   +RDP+
Sbjct: 213 ETEYRALALTAAELTWSSASRSRDPS 235

BLAST of Lag0041486 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 49.3 bits (116), Expect = 8.9e-06
Identity = 26/79 (32.91%), Postives = 46/79 (58.23%), Query Frame = 0

Query: 78  YWNFSLRDISFVVSKLSQFLHSPHDSHLVAAKRVLRYLAGSIGFSIMFRKGSSSFARLHA 137
           Y   +  D++F V++LSQF  +   + + A  +VL Y+ G++G  + +   ++S  +L A
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFY--SATSDLQLKA 61

Query: 138 YSYSDWAGDPLYRCSTSGF 157
           ++ SDWA  P  R S +GF
Sbjct: 62  FADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022143489.18.5e-7560.56uncharacterized protein LOC111013365 [Momordica charantia][more]
XP_022152156.17.4e-7156.18uncharacterized protein LOC111019945 [Momordica charantia][more]
XP_022143496.12.0e-5549.80uncharacterized protein LOC111013373 [Momordica charantia][more]
TQD72972.11.0e-5146.96hypothetical protein C1H46_041487 [Malus baccata][more]
XP_022154318.11.0e-5155.44uncharacterized protein LOC111021613 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q9ZT947.5e-4235.69Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Q94HW21.7e-4135.56Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
P925196.2e-2835.92Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
P041465.4e-2430.35Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109781.7e-2229.66Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Match NameE-valueIdentityDescription
A0A6J1CPG54.1e-7560.56uncharacterized protein LOC111013365 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A6J1DGS43.6e-7156.18uncharacterized protein LOC111019945 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A6J1CQE89.5e-5649.80uncharacterized protein LOC111013373 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
A0A2N9F8I72.8e-5545.42Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
A0A2N9HLR02.8e-5545.42Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40770 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G23160.11.6e-3434.54cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.14.4e-2935.92DNA/RNA polymerases superfamily protein [more]
ATMG00240.18.9e-0632.91Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 292..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..393
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 245..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 366..383
NoneNo IPR availablePANTHERPTHR11439:SF335SUBFAMILY NOT NAMEDcoord: 2..179
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..179
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 136..226
e-value: 1.47035E-38
score: 134.133
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..218

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0041486.1Lag0041486.1mRNA