Lag0041431 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041431
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Integrase catalytic domain-containing protein
Location	chr13: 17657929 .. 17660992 (+)
RNA-Seq Expression	Lag0041431
Synteny	Lag0041431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACTCTTCGCCGTATGGAGGCCATTTCAGCAGTTAGAGGACAGCTATGAGGATTTTGCATTGTGGATTTTTCTGGCCTACTTTATGGTCCATTGGTTCTACAAGCAATGTGATGCTTGCCAAAGGAGAGGAAACTTAGGGCCTAGAGATGAAATGCCTCTTACTTACATTTTGGAAGTTGAATTATTCGATGTTTGGGGTATTGACTTTATGGGGCCATTTCCTCCTTCTAATGGCAATATTTGTATCTTATTGGCAGTTGATTACGTGTCCAAGTGGGTTGAGGCCATCGCATGCCATCAGAATGATGCCAAGACAGTAGCAAGGTTTCTTCAATCACACATCTTTGTGCGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAGTTGATGATTGATAGAGCAAGATTTTTCGGGAGCATTTTACAGAGAAATATTTTGAGCTCTCAGCGTTTGTTTTTATTTTCTCGATGATTTGATTTAATTTGTTTTTTTTTTAGTTCGAGTGTTTAGATTTGGGTTGTTAAAATTCTGCATAATTTTGAGCAAGATTTTATTTTGTATATTTTCATTATTGGTAGTTTAGATTTTATCTATTCCGATTAGAGTTATTTTTTTAATTAATTGTGTTAAATTCTATTTTCGGTTTATTTATTTATTTGAATTATCCTTTAATTAATTTGATTAGTTTAAATCAGATTTTATTAGATTGAATTTTCAGTTAGTTTAAATCAGGTTTAGTAAAGATTTTTTTATGATTTATTAAGCTTTAAATAGAAAAGATAAGATTTGATTTGGTCGGTTAAATTTAAATTTAAATTCAATGATTTCCGTATTTTGTATCCAAGATTCTCCAGGTAACCTTTCCAGAAGATTGTTGCGGCAAAATTAAGGTTGAAGCAATTCTTTCGAATAAGAAGGATTTTATTGTAAATTGATTATTTTTACCATTTGATTTTGAATTTCTGTGGGCAGGTAAATTGCATTGATGCTGCCACGTGTCGCGCAAGGATAATCCAACGGTTTAGCCGTTGACAACACACAGTTATTTGCCATGGGCAATTGAAATTCAAGTTTTTACCGTTAGTGGATTTGATTCGCAAATTAAATGTGAACGGTAAATCCATTTAATACGAGGCAAAATCTTTCGGTTACGATTTGATTTGCTGCAGCTCTATTTATTCCTAAGCCTTCGGTAAGCTCTTCTCACTTCAATTTTGTTATTCATCCCTTGTCGTTTGCATTCTTCTTTCTTTCTCTGTGTACGATAGAAAATTCCTTTTGAGTTTTCAATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTACCTGTTACGCCCGAAGGTGAAAACAAAGAAAAAGAAGACGTCGGAGGAGAAAAAAGCTAAAAGAAGAAGAAGGCAACAACAGATTGAAGATCAATAAGTTGTGCAGAAGGTTGGGAAGATGTTTCTGCCACAGTGGTTGAAGAAGATCCGAAGGAACCAGAGGAACAAAATCCAGAGCAGACAGAGCCAAGAGTTGCGGATACAGAGGAAGTTCAAGAAGGGAATACCGAGGAAATTCAAGAAATACAGAATGAGGATGTGCGAGAGGAACAAGCAGAGGTTGCGCCTGAAAAAGGTAATGAGCCAGTGCAGGAGGCTCGAGTGGAGGTGATCATGCTGGAGGTACCCAAACGTCGCCGCATTAAGCGAAAAACGGGTCGCGTCAGGGTAGTCCGAACTGATACCCCCTCACCTCCAACTACTGATTCTGAAAGGCAAAATGCAGAGAAAGAAGAGCGTGAGAAGAAGGAGGCCGAGGAAAAATAAGAGAAGAAACAGAGAAAAAGGCTGAGGAAGAGCGGTTGCTCAAGCGAAGGGCAGAAAAGGGCAAAAGTGTTGCGGAAGCATCGGAAGAACCTAATGAGATGATGAGCCACAATTACTGTATGATCGTTTCGTCAACAATTCTGCCAGAGCAAAATATTCTAAGTTGCTGAAAAGAGACTTCCTGTTCGAGAGAGGATTTAGCGGTGATCTTCCGCATTTTTTGAGGATCGACATTACAGCCACGGTGGGAATTGTTTTATGCAAAGCCTAAGTCTGTAAACGCATAGGTGGTACGCGCATTTTATGCTAATATTGACAAAGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAAGTGGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCACGCAACGTATAATGAGATGGCTGTAGCGCCATCTAATGAGAAACTAAGTGATGTTGTGCGGGAGGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAGACAGAGAAAAGGACGTTTCAGTCAACTTATTTGAAGAGGGAAGCGAACACATGCATGGGATTTATCAGACAGAGGATGCTTCCAATGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTTTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGGAAGATTATTGTTAATGAGATTTCTGGTTGTTGGAAGAAGAAGGTGGGGAAGCTATTTTTTCCAAATACTATTACCATGCTTTGTAAGAGAGCAGGGGTTCTAGAGAATGAGGGAGATGTGATTTTGTTTGACAAGGGGATCATCATCACGTCTAACTTGGCACGACTTCAGCGTATGCAGGAGGTACGTCAGGGTGGACTTGTCTACGACATCAACACGATTTTAGAACAACTAACACTTTCGACCAGTAGGCAAGAGTTTTCCGAGAGGCAAGAGTTTGCCGAGAGGCAAGCTTTGACCTTCTGGAACTATGTTAAAAATTGTGATGTCAATCTGAAGAAGGCGCTACAAGAGAATTTTTCCAAACCGTATCCAGCCCTTCCAACATTCCCTGAAGACTTATTGAATCCCTGGGTTCTACCCCCACCAATTGAAAGAGGAGAAGGGGATGATGGAAATGAACAGGGCCAAGAGGACTGA

mRNA sequence

ATGTCACTCTTCGCCGTATGGAGGCCATTTCAGCAGTTAGAGGACAGCTATGAGGATTTTGCATTGTGGATTTTTCTGGCCTACTTTATGGTCCATTGGTTCTACAAGCAATGTGATGCTTGCCAAAGGAGAGGAAACTTAGGGCCTAGAGATGAAATGCCTCTTACTTACATTTTGGAAGTTGAATTATTCGATGTTTGGGGTATTGACTTTATGGGGCCATTTCCTCCTTCTAATGGCAATATTTGTATCTTATTGGCAGTTGATTACGTGTCCAAGTGGGTTGAGGCCATCGCATGCCATCAGAATGATGCCAAGACAGTAGCAAGTTATTTGCCATGGGCAATTGAAATTCAAGTTTTTACCAAAATTCCTTTTGAGTTTTCAATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTACCTGTTACGCCCGAAGAAGGTTGGGAAGATGTTTCTGCCACAGTGGTTGAAGAAGATCCGAAGGAACCAGAGGAACAAAATCCAGAGCAGACAGAGCCAAGAGTTGCGGATACAGAGGAAGTTCAAGAAGGGAATACCGAGGAAATTCAAGAAATACAGAATGAGGATGTGCGAGAGGAACAAGCAGAGGTTGCGCCTGAAAAAGGTAATGAGCCAGTGCAGGAGGCTCGAGTGGAGGTGATCATGCTGGAGGTACCCAAACGTCGCCGCATTAAGCGAAAAACGGGTCGCGTCAGGGTGGTACGCGCATTTTATGCTAATATTGACAAAGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAAGTGGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCACGCAACGTATAATGAGATGGCTGTAGCGCCATCTAATGAGAAACTAAGTGATGTTGTGCGGGAGGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAGACAGAGAAAAGGACGTTTCAGTCAACTTATTTGAAGAGGGAAGCGAACACATGCATGGGATTTATCAGACAGAGGATGCTTCCAATGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTTTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGGAAGATTATTGTTAATGAGATTTCTGGTTGTTGGAAGAAGAAGGTGGGGAAGCTATTTTTTCCAAATACTATTACCATGCTTTGTAAGAGAGCAGGGGTTCTAGAGAATGAGGGAGATGTGATTTTGTTTGACAAGGGGATCATCATCACGTCTAACTTGGCACGACTTCAGCGTATGCAGGAGGTACGTCAGGGTGGACTTGTCTACGACATCAACACGATTTTAGAACAACTAACACTTTCGACCAGTAGGCAAGAGTTTTCCGAGAGGCAAGAGTTTGCCGAGAGGCAAGCTTTGACCTTCTGGAACTATGTTAAAAATTGTGATGTCAATCTGAAGAAGGCGCTACAAGAGAATTTTTCCAAACCGTATCCAGCCCTTCCAACATTCCCTGAAGACTTATTGAATCCCTGGGTTCTACCCCCACCAATTGAAAGAGGAGAAGGGGATGATGGAAATGAACAGGGCCAAGAGGACTGA

Coding sequence (CDS)

ATGTCACTCTTCGCCGTATGGAGGCCATTTCAGCAGTTAGAGGACAGCTATGAGGATTTTGCATTGTGGATTTTTCTGGCCTACTTTATGGTCCATTGGTTCTACAAGCAATGTGATGCTTGCCAAAGGAGAGGAAACTTAGGGCCTAGAGATGAAATGCCTCTTACTTACATTTTGGAAGTTGAATTATTCGATGTTTGGGGTATTGACTTTATGGGGCCATTTCCTCCTTCTAATGGCAATATTTGTATCTTATTGGCAGTTGATTACGTGTCCAAGTGGGTTGAGGCCATCGCATGCCATCAGAATGATGCCAAGACAGTAGCAAGTTATTTGCCATGGGCAATTGAAATTCAAGTTTTTACCAAAATTCCTTTTGAGTTTTCAATGGCTAAAACGAGAGCAAGAAAAGAGAGAGATAATGAGGAAGAGGAGGTACCTGTTACGCCCGAAGAAGGTTGGGAAGATGTTTCTGCCACAGTGGTTGAAGAAGATCCGAAGGAACCAGAGGAACAAAATCCAGAGCAGACAGAGCCAAGAGTTGCGGATACAGAGGAAGTTCAAGAAGGGAATACCGAGGAAATTCAAGAAATACAGAATGAGGATGTGCGAGAGGAACAAGCAGAGGTTGCGCCTGAAAAAGGTAATGAGCCAGTGCAGGAGGCTCGAGTGGAGGTGATCATGCTGGAGGTACCCAAACGTCGCCGCATTAAGCGAAAAACGGGTCGCGTCAGGGTGGTACGCGCATTTTATGCTAATATTGACAAAGAAGATGGTTTCCAAGTGATTGTTCGAGGAGTCGAAGTGGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCACGCAACGTATAATGAGATGGCTGTAGCGCCATCTAATGAGAAACTAAGTGATGTTGTGCGGGAGGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAGACAGAGAAAAGGACGTTTCAGTCAACTTATTTGAAGAGGGAAGCGAACACATGCATGGGATTTATCAGACAGAGGATGCTTCCAATGACTCATGACTCGACGGTCTCGAGGGAACGGGTTCTTTTGGCTTTCGCGATTTTGCGGTCTCTCAGCATTGATGTAGGGAAGATTATTGTTAATGAGATTTCTGGTTGTTGGAAGAAGAAGGTGGGGAAGCTATTTTTTCCAAATACTATTACCATGCTTTGTAAGAGAGCAGGGGTTCTAGAGAATGAGGGAGATGTGATTTTGTTTGACAAGGGGATCATCATCACGTCTAACTTGGCACGACTTCAGCGTATGCAGGAGGTACGTCAGGGTGGACTTGTCTACGACATCAACACGATTTTAGAACAACTAACACTTTCGACCAGTAGGCAAGAGTTTTCCGAGAGGCAAGAGTTTGCCGAGAGGCAAGCTTTGACCTTCTGGAACTATGTTAAAAATTGTGATGTCAATCTGAAGAAGGCGCTACAAGAGAATTTTTCCAAACCGTATCCAGCCCTTCCAACATTCCCTGAAGACTTATTGAATCCCTGGGTTCTACCCCCACCAATTGAAAGAGGAGAAGGGGATGATGGAAATGAACAGGGCCAAGAGGACTGA

Protein sequence

MSLFAVWRPFQQLEDSYEDFALWIFLAYFMVHWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVWGIDFMGPFPPSNGNICILLAVDYVSKWVEAIACHQNDAKTVASYLPWAIEIQVFTKIPFEFSMAKTRARKERDNEEEEVPVTPEEGWEDVSATVVEEDPKEPEEQNPEQTEPRVADTEEVQEGNTEEIQEIQNEDVREEQAEVAPEKGNEPVQEARVEVIMLEVPKRRRIKRKTGRVRVVRAFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHATYNEMAVAPSNEKLSDVVREVGIEGARWQLSKTEKRTFQSTYLKREANTCMGFIRQRMLPMTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIITSNLARLQRMQEVRQGGLVYDINTILEQLTLSTSRQEFSERQEFAERQALTFWNYVKNCDVNLKKALQENFSKPYPALPTFPEDLLNPWVLPPPIERGEGDDGNEQGQED

Homology

[Close]

BLAST of Lag0041431 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 147.9 bits (372), Expect = 2.5e-31
Identity = 102/299 (34.11%), Postives = 147/299 (49.16%), Query Frame = 0


Query: 246 VVRAFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHATYNEMAVAPSNEKLSDV 305
           +VR FYAN+   +   + VRGV+V WS  AINA++ L + P   ++E     +  +L  V
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEPELITV 75

Query: 306 VREVGIEGARWQLSKTEKRTFQSTYLKREANTCMGFIRQRMLPMTHDSTVSRERVLLAFA 365
           +  V   GA W +S     T   + L   A     F++ R+LP TH   VS++R+LL  +
Sbjct: 76  LETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHS 135

Query: 366 ILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIIT 425
           +L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  L NE    L + G I  
Sbjct: 136 MLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEK--LHNTGEIDA 195

Query: 426 SNLARL---------QRMQEVRQGGLVYDINT--ILEQLTLSTSRQEFSERQEFAERQAL 485
             +AR+         Q+    R            +L+QL     R     +QE   +Q  
Sbjct: 196 IAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQR---LSQQEHTHKQQQ 255

Query: 486 TFWNYVKNCDVNLKKALQENFSKPYPALPTFPEDLLNPWVLPPPIERGEGDDGNEQGQE 534
            FW Y K  D  LKKALQ NF++P P  P FP+++L    L    E     DG+ +  E
Sbjct: 256 QFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQD--LDYEYEAESDKDGSNEAAE 306

[Close]

BLAST of Lag0041431 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 144.8 bits (364), Expect = 2.1e-30
Identity = 106/311 (34.08%), Postives = 150/311 (48.23%), Query Frame = 0


Query: 244 VRVVRAFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHATYNEMAVAPSNEKLS 303
           V +VR FYAN+   +   V VRGV+V WS  AINA++ L + P   ++E     + + L 
Sbjct: 84  VPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDLI 143

Query: 304 DVVREVGIEGARWQLSKTEKRTFQSTYLKREANTCMGFIRQRMLPMTHDSTVSRERVLLA 363
            V+  V   GA W +S     T   + L   A     F++ R+LP TH  TVS++R+LL 
Sbjct: 144 TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLL 203

Query: 364 FAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKG 423
            ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+  RA  L NE    L + G
Sbjct: 204 HSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEK--LHNTG 263

Query: 424 IIITSNLARL--------------QRMQEVRQGGLVYDINTILEQLTLSTSRQEFSERQ- 483
            I    +AR+               R           DI   L+ L    S+QE  +   
Sbjct: 264 EIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHM 323

Query: 484 ----EFAERQALTFWNYVKNCDVNLKKALQENFSKPYPALPTFPEDLLNPWVLPPPIERG 534
               +   +Q   FW Y K  D  LKKALQ NF++P P  P FP+++L    L    E  
Sbjct: 324 MSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQEILKD--LDYEYEAE 383

[Close]

BLAST of Lag0041431 vs. NCBI nr
Match: KAE8676815.1 (hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus])

HSP 1 Score: 132.9 bits (333), Expect = 8.3e-27
Identity = 142/572 (24.83%), Postives = 237/572 (41.43%), Query Frame = 0


Query: 43   RRGNLGPRDEMPLTYILEVELFDVWGIDFMGPFPPSNGNICILLAVDYVSKWVEAIACHQ 102
            + GN+  + EMPL  ILE+ELFDVWGIDFM PFP S G + ILLAVDYVSKWVEAIA   
Sbjct: 644  KTGNISRQHEMPLQNILEIELFDVWGIDFMRPFPSSEGKLYILLAVDYVSKWVEAIATSM 703

Query: 103  NDAKTV------------------------------------------ASYLPWAIEIQ- 162
            ND+KT+                                          A +LP  +E + 
Sbjct: 704  NDSKTILEKVVNPRRKDWSPKLDEALWAYKTTFKTPLGMSPFKIVYGKACHLPVELEHKA 763

Query: 163  --VFTKIPFEFSMAKTRARKERDNEEEEVPVTPEEGWEDVSATVVEEDPKEPEEQNPEQT 222
              V  ++ F+  +A+ + R    NE EE      E     +A + +E  K   + +  + 
Sbjct: 764  YWVIKRLNFDAQLAEEQ-RLLEFNEMEEFRAQAYE-----NARIYKEKTK---KWHDHKL 823

Query: 223  EPRVADTEEVQEGNTEEIQEIQN-----------------------EDVREEQAEVAPEK 282
             PR  +   V      +I+ I N                       + +R   AE  PE+
Sbjct: 824  MPRPFEVHYVYPHGAVDIKRIDNGTIFKVNGQRLKAYNRVPPPHNKDVLRLHDAEACPEE 883

Query: 283  GN----EPV--QEARVEVIMLEVPKRRRIKRKTGRVRVVRAFYANIDKEDGFQVIVRGV- 342
                   PV  + ++ +    E  K R    K  ++    +F    + + G    +  + 
Sbjct: 884  NQNSMPRPVTPEGSKFQKFENEEAKARFQNFKNRKLFFELSFIFTKETDGGLGPDIMDIV 943

Query: 343  -EVDWS-----PSAINALYNLQNFPHATYNEMAVAPSNEKLSDVVREVGIEGARWQLSKT 402
              + W      P ++N   ++ +  H  + + A    +    +++ ++  E   W   +T
Sbjct: 944  TPLKWKKFARHPGSVNTSLDVVD-RHVQFEDEA---DSHTYDEILEDLCFENIEWNGRQT 1003

Query: 403  EKRTFQSTYLKREANTCMGFIRQRMLPMTHDSTVSRERVLLAFAILRSLSIDVGKIIVNE 462
             + +     L+  A     F++ +++P +H++TVS  R+LL  +I+ S  IDVG+IIV +
Sbjct: 1004 SRYSVNRENLQLRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSIMVSHPIDVGRIIVQQ 1063

Query: 463  ISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIITSNLARLQRMQEVRQGG 522
            +  C  KK   L FPN IT LC++  V EN  D IL     I  + L  L  ++  +   
Sbjct: 1064 VHDCLSKKASALVFPNLITTLCRKKKVEENAFDEILPGLSSITRARLPLLLGIENPKYKD 1123

Query: 523  LVYD-------INTILEQLTLSTSRQEFSERQEFAERQALTFWNYVKNCDVNLKKALQEN 527
             +++        N     L L  +  +              F+ YVK+ D  ++   QE 
Sbjct: 1124 PIHEQSAGTTQSNAEARLLALEEAVIQTQTHLHALHGNIYNFFGYVKHRDAVVESMFQEI 1183

[Close]

BLAST of Lag0041431 vs. NCBI nr
Match: XP_042757945.1 (uncharacterized protein LOC111885853 [Lactuca sativa])

HSP 1 Score: 131.0 bits (328), Expect = 3.1e-26
Identity = 56/79 (70.89%), Postives = 68/79 (86.08%), Query Frame = 0


Query: 34   FYKQCDACQRRGNLGPRDEMPLTYILEVELFDVWGIDFMGPFPPSNGNICILLAVDYVSK 93
            F K+CD CQR GN+G R EMPL+ I+EVELFDVWGIDFMGPF PS+G + IL+AVDYVSK
Sbjct: 1426 FVKRCDRCQRTGNIGRRQEMPLSNIMEVELFDVWGIDFMGPFVPSDGKMYILVAVDYVSK 1485

Query: 94   WVEAIACHQNDAKTVASYL 113
            WVEA+AC +NDA+TV ++L
Sbjct: 1486 WVEAVACVRNDARTVINFL 1504

[Close]

BLAST of Lag0041431 vs. NCBI nr
Match: XP_023521407.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 130.6 bits (327), Expect = 4.1e-26
Identity = 57/79 (72.15%), Postives = 64/79 (81.01%), Query Frame = 0


Query: 34  FYKQCDACQRRGNLGPRDEMPLTYILEVELFDVWGIDFMGPFPPSNGNICILLAVDYVSK 93
           F K CD CQR GN+  ++E+PL  ILEVELFDVWGIDFMGPFPPS GN+ IL+AVDYVSK
Sbjct: 211 FCKGCDQCQRTGNISKKNELPLNSILEVELFDVWGIDFMGPFPPSYGNLYILVAVDYVSK 270

Query: 94  WVEAIACHQNDAKTVASYL 113
           WVEAIAC  ND KTV  +L
Sbjct: 271 WVEAIACPSNDGKTVLKFL 289

[Close]

BLAST of Lag0041431 vs. ExPASy Swiss-Prot
Match: P92516 (Uncharacterized mitochondrial protein AtMg00750 OS=Arabidopsis thaliana OX=3702 GN=AtMg00750 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 5.1e-11
Identity = 31/60 (51.67%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 32  HWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVWGIDFM-------GPFPPSNGNICI 85
           H F   CDACQR+GN   R+EMP  +ILEVE+FDVWGI FM        P  P+ G +C+
Sbjct: 50  HGFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFMKKTIFSWKPIHPNGGRLCL 109

[Close]

BLAST of Lag0041431 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-31
Identity = 102/299 (34.11%), Postives = 147/299 (49.16%), Query Frame = 0


Query: 246 VVRAFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHATYNEMAVAPSNEKLSDV 305
           +VR FYAN+   +   + VRGV+V WS  AINA++ L + P   ++E     +  +L  V
Sbjct: 16  LVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIENITEPELITV 75

Query: 306 VREVGIEGARWQLSKTEKRTFQSTYLKREANTCMGFIRQRMLPMTHDSTVSRERVLLAFA 365
           +  V   GA W +S     T   + L   A     F++ R+LP TH   VS++R+LL  +
Sbjct: 76  LETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHS 135

Query: 366 ILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIIT 425
           +L   SI+VG++I +EI  C  +K G LFFP+ IT LC+ A  L NE    L + G I  
Sbjct: 136 MLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEK--LHNTGEIDA 195

Query: 426 SNLARL---------QRMQEVRQGGLVYDINT--ILEQLTLSTSRQEFSERQEFAERQAL 485
             +AR+         Q+    R            +L+QL     R     +QE   +Q  
Sbjct: 196 IAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQR---LSQQEHTHKQQQ 255

Query: 486 TFWNYVKNCDVNLKKALQENFSKPYPALPTFPEDLLNPWVLPPPIERGEGDDGNEQGQE 534
            FW Y K  D  LKKALQ NF++P P  P FP+++L    L    E     DG+ +  E
Sbjct: 256 QFWAYSKERDTALKKALQNNFTRPIPTFPAFPQEILQD--LDYEYEAESDKDGSNEAAE 306

[Close]

BLAST of Lag0041431 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-30
Identity = 106/311 (34.08%), Postives = 150/311 (48.23%), Query Frame = 0


Query: 244 VRVVRAFYANIDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHATYNEMAVAPSNEKLS 303
           V +VR FYAN+   +   V VRGV+V WS  AINA++ L + P   ++E     + + L 
Sbjct: 84  VPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFGLGD-PVDEHSEFIQNITQQDLI 143

Query: 304 DVVREVGIEGARWQLSKTEKRTFQSTYLKREANTCMGFIRQRMLPMTHDSTVSRERVLLA 363
            V+  V   GA W +S     T   + L   A     F++ R+LP TH  TVS++R+LL 
Sbjct: 144 TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLL 203

Query: 364 FAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDVILFDKG 423
            ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC+  RA  L NE    L + G
Sbjct: 204 HSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITRLCRNARAPFLVNEEK--LHNTG 263

Query: 424 IIITSNLARL--------------QRMQEVRQGGLVYDINTILEQLTLSTSRQEFSERQ- 483
            I    +AR+               R           DI   L+ L    S+QE  +   
Sbjct: 264 EIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDILQQLKALEQRLSQQEVQQYHM 323

Query: 484 ----EFAERQALTFWNYVKNCDVNLKKALQENFSKPYPALPTFPEDLLNPWVLPPPIERG 534
               +   +Q   FW Y K  D  LKKALQ NF++P P  P FP+++L    L    E  
Sbjct: 324 MSLLQHTHKQQQQFWAYSKERDTALKKALQNNFTRPMPTFPAFPQEILKD--LDYEYEAE 383

[Close]

BLAST of Lag0041431 vs. ExPASy TrEMBL
Match: A0A6A2Y697 (Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111582pilonHSYRG01273 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.0e-27
Identity = 142/572 (24.83%), Postives = 237/572 (41.43%), Query Frame = 0


Query: 43   RRGNLGPRDEMPLTYILEVELFDVWGIDFMGPFPPSNGNICILLAVDYVSKWVEAIACHQ 102
            + GN+  + EMPL  ILE+ELFDVWGIDFM PFP S G + ILLAVDYVSKWVEAIA   
Sbjct: 644  KTGNISRQHEMPLQNILEIELFDVWGIDFMRPFPSSEGKLYILLAVDYVSKWVEAIATSM 703

Query: 103  NDAKTV------------------------------------------ASYLPWAIEIQ- 162
            ND+KT+                                          A +LP  +E + 
Sbjct: 704  NDSKTILEKVVNPRRKDWSPKLDEALWAYKTTFKTPLGMSPFKIVYGKACHLPVELEHKA 763

Query: 163  --VFTKIPFEFSMAKTRARKERDNEEEEVPVTPEEGWEDVSATVVEEDPKEPEEQNPEQT 222
              V  ++ F+  +A+ + R    NE EE      E     +A + +E  K   + +  + 
Sbjct: 764  YWVIKRLNFDAQLAEEQ-RLLEFNEMEEFRAQAYE-----NARIYKEKTK---KWHDHKL 823

Query: 223  EPRVADTEEVQEGNTEEIQEIQN-----------------------EDVREEQAEVAPEK 282
             PR  +   V      +I+ I N                       + +R   AE  PE+
Sbjct: 824  MPRPFEVHYVYPHGAVDIKRIDNGTIFKVNGQRLKAYNRVPPPHNKDVLRLHDAEACPEE 883

Query: 283  GN----EPV--QEARVEVIMLEVPKRRRIKRKTGRVRVVRAFYANIDKEDGFQVIVRGV- 342
                   PV  + ++ +    E  K R    K  ++    +F    + + G    +  + 
Sbjct: 884  NQNSMPRPVTPEGSKFQKFENEEAKARFQNFKNRKLFFELSFIFTKETDGGLGPDIMDIV 943

Query: 343  -EVDWS-----PSAINALYNLQNFPHATYNEMAVAPSNEKLSDVVREVGIEGARWQLSKT 402
              + W      P ++N   ++ +  H  + + A    +    +++ ++  E   W   +T
Sbjct: 944  TPLKWKKFARHPGSVNTSLDVVD-RHVQFEDEA---DSHTYDEILEDLCFENIEWNGRQT 1003

Query: 403  EKRTFQSTYLKREANTCMGFIRQRMLPMTHDSTVSRERVLLAFAILRSLSIDVGKIIVNE 462
             + +     L+  A     F++ +++P +H++TVS  R+LL  +I+ S  IDVG+IIV +
Sbjct: 1004 SRYSVNRENLQLRAKLWNHFLKHKLMPTSHNTTVSLSRLLLLHSIMVSHPIDVGRIIVQQ 1063

Query: 463  ISGCWKKKVGKLFFPNTITMLCKRAGVLENEGDVILFDKGIIITSNLARLQRMQEVRQGG 522
            +  C  KK   L FPN IT LC++  V EN  D IL     I  + L  L  ++  +   
Sbjct: 1064 VHDCLSKKASALVFPNLITTLCRKKKVEENAFDEILPGLSSITRARLPLLLGIENPKYKD 1123

Query: 523  LVYD-------INTILEQLTLSTSRQEFSERQEFAERQALTFWNYVKNCDVNLKKALQEN 527
             +++        N     L L  +  +              F+ YVK+ D  ++   QE 
Sbjct: 1124 PIHEQSAGTTQSNAEARLLALEEAVIQTQTHLHALHGNIYNFFGYVKHRDAVVESMFQEI 1183

[Close]

BLAST of Lag0041431 vs. ExPASy TrEMBL
Match: A0A6J1DZ22 (uncharacterized protein LOC111025586 OS=Momordica charantia OX=3673 GN=LOC111025586 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 7.6e-26
Identity = 54/77 (70.13%), Postives = 64/77 (83.12%), Query Frame = 0


Query: 36  KQCDACQRRGNLGPRDEMPLTYILEVELFDVWGIDFMGPFPPSNGNICILLAVDYVSKWV 95
           + C+ CQR GN+  R EMPLTYILE+  FDVWG+DF+GPFPPSNGN+ ILLAVDYVSKWV
Sbjct: 235 QHCNECQRVGNISKRSEMPLTYILELVFFDVWGMDFIGPFPPSNGNLFILLAVDYVSKWV 294

Query: 96  EAIACHQNDAKTVASYL 113
           EA+AC  +DAK VA +L
Sbjct: 295 EAVACTNSDAKVVAKFL 311

[Close]

BLAST of Lag0041431 vs. ExPASy TrEMBL
Match: A0A1U7XG07 (uncharacterized protein LOC104234082 OS=Nicotiana sylvestris OX=4096 GN=LOC104234082 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.9e-24
Identity = 56/81 (69.14%), Postives = 62/81 (76.54%), Query Frame = 0


Query: 32  HWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVWGIDFMGPFPPSNGNICILLAVDYV 91
           H F K+CD CQR G +  R EMPL  ILEVELFDVWGIDFMGPFPPS GN  ILLAVDYV
Sbjct: 313 HAFVKKCDQCQRTGTITRRHEMPLNNILEVELFDVWGIDFMGPFPPSRGNKYILLAVDYV 372

Query: 92  SKWVEAIACHQNDAKTVASYL 113
           SKW+E IA   NDA  VA+++
Sbjct: 373 SKWIETIALPTNDAMVVAAFV 393

[Close]

BLAST of Lag0041431 vs. TAIR 10
Match: ATMG00750.1 (GAG/POL/ENV polyprotein )

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-12
Identity = 31/60 (51.67%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 32  HWFYKQCDACQRRGNLGPRDEMPLTYILEVELFDVWGIDFM-------GPFPPSNGNICI 85
           H F   CDACQR+GN   R+EMP  +ILEVE+FDVWGI FM        P  P+ G +C+
Sbjct: 50  HGFVSSCDACQRKGNFTKRNEMPQHFILEVEVFDVWGIYFMKKTIFSWKPIHPNGGRLCL 109

The following BLAST results are available for this feature:

BLAST of Lag0041431 vs. NCBI nr


Match Name	E-value	Identity	Description
PON78020.1	2.5e-31	34.11	hypothetical protein PanWU01x14_023740 [Parasponia andersonii]	[more]
PON46472.1	2.1e-30	34.08	hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]	[more]
KAE8676815.1	8.3e-27	24.83	hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]	[more]
XP_042757945.1	3.1e-26	70.89	uncharacterized protein LOC111885853 [Lactuca sativa]	[more]
XP_023521407.1	4.1e-26	72.15	LOW QUALITY PROTEIN: uncharacterized protein LOC111785222 [Cucurbita pepo subsp....	[more]

BLAST of Lag0041431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92516	5.1e-11	51.67	Uncharacterized mitochondrial protein AtMg00750 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lag0041431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2P5DXM3	1.2e-31	34.11	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE...	[more]
A0A2P5BCG4	1.0e-30	34.08	Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1...	[more]
A0A6A2Y697	4.0e-27	24.83	Reverse transcriptase domain-containing protein OS=Hibiscus syriacus OX=106335 G...	[more]
A0A6J1DZ22	7.6e-26	70.13	uncharacterized protein LOC111025586 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A1U7XG07	1.9e-24	69.14	uncharacterized protein LOC104234082 OS=Nicotiana sylvestris OX=4096 GN=LOC10423...	[more]

BLAST of Lag0041431 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00750.1	3.6e-12	51.67	GAG/POL/ENV polyprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 181..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 514..534
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 24..112
None	No IPR available	PANTHER	PTHR24559:SF373	REVERSE TRANSCRIPTASE DOMAIN, RIBONUCLEASE H-LIKE DOMAIN PROTEIN-RELATED	coord: 24..112
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 60..128 e-value: 1.0E-11 score: 46.5
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 63..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0041431.1	Lag0041431.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding