Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCTGTTTGGGTATGTTTTGGTGGTGTGTGGAAGGAGAGTGAAAATGAGTATGATGGTGGAGAGGTTAGGGGCTTAGACGTGGATGCTGAAATTTCGTATAACAAGTTCTTAGGTCGGGTGTATGAATTAAGTAGTATAAATCCGAATGAGAACGACATTGTATTGAGGTGTCTACTTCAACTGAGGTGTGTCTGTCTTCTTCTGACTCTGATCGCTAACAGACTTGGTGGTACAGTTTATGGAGGCTATGTATTTCGAGTAAGCATAAGTTCTTTTTATGGCGAATTTTCCATGAGCATCTGCCCACGACGGTAGATCTCCTTAAAAAAGGTGTTGAGGTTTCTCCTTTGTGTGTGTTGTGTAGCTCTACTGTGGAGGACATCCTCCATCTTTTCTGGAAGTGCTCTGTGACTAGAGAAATGTGGCTCTATTCAAAATTTCTCATCTTTATTAGTCGCTATATCATTTGGATTTTGTTGATGTCATATGGGCATTGAAGGAGAAGTTTGGTCTATTAGACTATGAACTTGTGAAAGTATTCTGGTGGTCAGTTTCGAATTTGCGGAACAATATGTGCTGGAAGGGTGAATCTGATGGTCGGGATTTGTGGGCATGGTCTGAGGAGTATCTGAGGGCGTATCATGATGTTGTTAGCAGGTGTGAGTCTTGCTACAATTTGCAACCTCGCCCCATTCGGCCGATAGAGCAAGGTGCATGGACTCCCCCGGTGGTCGATGAGTTTAAACTCAACACCGATGCTTCTGTCAGGCCTGAAATGGGTGAAGCGGAGGGAGGTTGTATTCTTCGTGATGCATTTGGTGCAGTGTTTCTGGCGGCGTGCTTGGCCCTACCTAGGTGCTGGAGCGTGGATCTTACTGAAGGTTGGGCATTGGTGAAGGGCGTGGAGTTAGCGTTACAGATGAGTTTCTCAAATTTCTGTATTGAAATGGATTCATTGAGGCTGGTTCGAATTCTCCATGGGGAGTTGACTGATGCTTCAGAGGTCGGCCTGCTGATGGATGATGCCAGACGACTTCTCCATCCTTGTGTCAGTGACAAGGTTCTTTTTACACCACGACATGGGAACAAAGTGGCGCATGCTCTAGCTTGTTTGACCTTCTCTTATTCTGATCGTGTTTGGCTTGAAGAGTGA
mRNA sequence
ATGCCTCCTGTTTGGGTATGTTTTGGTGGTGTGTGGAAGGAGAGTGAAAATGAGTATGATGGTGGAGAGGTTAGGGGCTTAGACGTGGATGCTGAAATTTCGTATAACAAGTTCTTAGGTCGGGTGTATGAATTAAGTAGTATAAATCCGAATGAGAACGACATTGTATTGAGGTGTCTACTTCAACTGAGGTGTGTCTGTCTTCTTCTGACTCTGATCGCTAACAGACTTGGTGGTACAGTTTATGGAGGCTATGTATTTCGATCGCTATATCATTTGGATTTTGTTGATGTCATATGGGCATTGAAGGAGAAGTTTGGTCTATTAGACTATGAACTTGTGAAAGTATTCTGGTGGTCAGTTTCGAATTTGCGGAACAATATGTGCTGGAAGGGTGAATCTGATGGTCGGGATTTGTGGGCATGGTCTGAGGAGTATCTGAGGGCGTATCATGATGTTGTTAGCAGGTGTGAGTCTTGCTACAATTTGCAACCTCGCCCCATTCGGCCGATAGAGCAAGGTGCATGGACTCCCCCGGTGGTCGATGAGTTTAAACTCAACACCGATGCTTCTGTCAGGCCTGAAATGGGTGAAGCGGAGGGAGGTTGTATTCTTCGTGATGCATTTGGTGCAGTGTTTCTGGCGGCGTGCTTGGCCCTACCTAGGTGCTGGAGCGTGGATCTTACTGAAGGTTGGGCATTGGTGAAGGGCGTGGAGTTAGCGTTACAGATGAGTTTCTCAAATTTCTGTATTGAAATGGATTCATTGAGGCTGGTTCGAATTCTCCATGGGGAGTTGACTGATGCTTCAGAGGTCGGCCTGCTGATGGATGATGCCAGACGACTTCTCCATCCTTGTGTCAGTGACAAGGTTCTTTTTACACCACGACATGGGAACAAAGTGGCGCATGCTCTAGCTTGTTTGACCTTCTCTTATTCTGATCGTGTTTGGCTTGAAGAGTGA
Coding sequence (CDS)
ATGCCTCCTGTTTGGGTATGTTTTGGTGGTGTGTGGAAGGAGAGTGAAAATGAGTATGATGGTGGAGAGGTTAGGGGCTTAGACGTGGATGCTGAAATTTCGTATAACAAGTTCTTAGGTCGGGTGTATGAATTAAGTAGTATAAATCCGAATGAGAACGACATTGTATTGAGGTGTCTACTTCAACTGAGGTGTGTCTGTCTTCTTCTGACTCTGATCGCTAACAGACTTGGTGGTACAGTTTATGGAGGCTATGTATTTCGATCGCTATATCATTTGGATTTTGTTGATGTCATATGGGCATTGAAGGAGAAGTTTGGTCTATTAGACTATGAACTTGTGAAAGTATTCTGGTGGTCAGTTTCGAATTTGCGGAACAATATGTGCTGGAAGGGTGAATCTGATGGTCGGGATTTGTGGGCATGGTCTGAGGAGTATCTGAGGGCGTATCATGATGTTGTTAGCAGGTGTGAGTCTTGCTACAATTTGCAACCTCGCCCCATTCGGCCGATAGAGCAAGGTGCATGGACTCCCCCGGTGGTCGATGAGTTTAAACTCAACACCGATGCTTCTGTCAGGCCTGAAATGGGTGAAGCGGAGGGAGGTTGTATTCTTCGTGATGCATTTGGTGCAGTGTTTCTGGCGGCGTGCTTGGCCCTACCTAGGTGCTGGAGCGTGGATCTTACTGAAGGTTGGGCATTGGTGAAGGGCGTGGAGTTAGCGTTACAGATGAGTTTCTCAAATTTCTGTATTGAAATGGATTCATTGAGGCTGGTTCGAATTCTCCATGGGGAGTTGACTGATGCTTCAGAGGTCGGCCTGCTGATGGATGATGCCAGACGACTTCTCCATCCTTGTGTCAGTGACAAGGTTCTTTTTACACCACGACATGGGAACAAAGTGGCGCATGCTCTAGCTTGTTTGACCTTCTCTTATTCTGATCGTGTTTGGCTTGAAGAGTGA
Protein sequence
MPPVWVCFGGVWKESENEYDGGEVRGLDVDAEISYNKFLGRVYELSSINPNENDIVLRCLLQLRCVCLLLTLIANRLGGTVYGGYVFRSLYHLDFVDVIWALKEKFGLLDYELVKVFWWSVSNLRNNMCWKGESDGRDLWAWSEEYLRAYHDVVSRCESCYNLQPRPIRPIEQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVDLTEGWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPCVSDKVLFTPRHGNKVAHALACLTFSYSDRVWLEE
Homology
BLAST of Lag0041363 vs. NCBI nr
Match:
XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])
HSP 1 Score: 114.4 bits (285), Expect = 1.8e-21
Identity = 74/211 (35.07%), Postives = 101/211 (47.87%), Query Frame = 0
Query: 114 VKVFWWSVSNLRNNMCWKGESDG--RDLWAWSEEYLRAYHDVVSRCESCYNLQPRPIRPI 173
+ V W++ N RN G DL +WSE YL+ Y S + RP
Sbjct: 44 IVVLLWAIWNARNQTPQHFSLGGSLSDLVSWSENYLQVYQAAQRSSXSALVV----CRPP 103
Query: 174 EQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVDLTEG 233
W PP K+N DA+ R E A G I+RD+ G V+L A L R VD EG
Sbjct: 104 RVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEG 163
Query: 234 WALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPCVSD-K 293
+A+ +G+ LA++ F F IE DSLR+ +L + D SEVG+L + L
Sbjct: 164 FAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVIKLFLSSHAERVS 223
Query: 294 VLFTPRHGNKVAHALACLTFSYSD-RVWLEE 321
FT R+GN AH LA L + ++W+EE
Sbjct: 224 FSFTHRNGNAXAHLLAQLALTSPHLQIWVEE 250
BLAST of Lag0041363 vs. NCBI nr
Match:
XP_021716820.1 (uncharacterized protein LOC110684687 [Chenopodium quinoa])
HSP 1 Score: 106.3 bits (264), Expect = 5.0e-19
Identity = 65/211 (30.81%), Postives = 104/211 (49.29%), Query Frame = 0
Query: 118 WWSVSN-------LRNNMCWKGESDGRDLWAWSEEYLRAYHDVVSRCESCYNLQPRPIRP 177
WW++ LR N+ W E+ +DL ++ + D ++ + + R
Sbjct: 79 WWNILFAILWGIWLRRNV-WSYENRKKDLMDVIQKAVSVVGDYEQAQQALSSSEGR--HQ 138
Query: 178 IEQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVDLTE 237
+ + W PP K+N+DA++ GG ++RDA G V +A CL L + VD+ E
Sbjct: 139 LLESKWKPPTQGMIKINSDAAIFDNSAVGLGG-VMRDALGEVVVATCLCLRSKYEVDVAE 198
Query: 238 GWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPCVSDK 297
AL + +AL+ F C+E D +++ L A+ +G++++D +L C S
Sbjct: 199 ALALRHSLRIALESEFRKVCLETDCMKVFSHLTKGCAPATILGMVINDIMQLARGCQSCS 258
Query: 298 VLFTPRHGNKVAHALACLTFSYSD-RVWLEE 321
F R GN AHALA L+ SY D RVW+EE
Sbjct: 259 FSFVKRSGNGAAHALAKLSSSYGDLRVWMEE 285
BLAST of Lag0041363 vs. NCBI nr
Match:
XP_021729829.1 (uncharacterized protein LOC110696801 [Chenopodium quinoa])
HSP 1 Score: 102.8 bits (255), Expect = 5.5e-18
Identity = 65/210 (30.95%), Postives = 103/210 (49.05%), Query Frame = 0
Query: 116 VFW---WSVSNLRNNMCWKGESDGRDLWAWSEEYLRAYHDVVSRCESCYNL-QPRPIRPI 175
+FW W V N C++G+ W S E +R +V E+ + P P
Sbjct: 48 IFWSIAWGVWLKCNRWCFEGKR-----WK-SNEVIRRAVSMVGEFETVQEISNTNPSSPT 107
Query: 176 EQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVDLTEG 235
+W PP+ K+N+DA+V G GG ++RD+ G V + CL L R + VD+ E
Sbjct: 108 LDSSWKPPMEGVIKVNSDAAVFAPSGVGLGG-VMRDSVGDVVASTCLKLERKFEVDVVEA 167
Query: 236 WALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPCVSDKV 295
A+ + + + F N C+E D L+L L +T ++ G ++ D +L C
Sbjct: 168 LAMRHALNIVIDFRFRNVCLETDCLKLHNHLVKSITPSTAFGAIVKDFLQLSTVCHLVSF 227
Query: 296 LFTPRHGNKVAHALACLTFSYSD-RVWLEE 321
F R GN+VAH LA L S+++ RV++E+
Sbjct: 228 SFVRRSGNRVAHNLAKLCLSFNELRVFMED 250
BLAST of Lag0041363 vs. NCBI nr
Match:
CCA66036.1 (hypothetical protein [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 100.5 bits (249), Expect = 2.7e-17
Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 0
Query: 118 WWSVSNLRNNMCWKGESDGRDLWAWSEEYLRAYHDVVSRC--------ESCYNLQPRPIR 177
WW++ + +CW GR+ W + ++ L A+ +VV R E C + P
Sbjct: 1149 WWALFWM---ICWNIWL-GRNKWVFEKKKL-AFQEVVERAVRGVMEFEEECAHTSPVETL 1208
Query: 178 PIEQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVD-- 237
+ W+ P V KLN DA+V +G GG ++RDA G V LA C W+++
Sbjct: 1209 NTHENGWSVPPVGMVKLNVDAAVFKHVGIGMGG-VVRDAEGDVLLATCCG---GWAMEDP 1268
Query: 238 -LTEGWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPC 297
+ E +L G+++A + F N +EMD +L L G+ +D + G ++DD L C
Sbjct: 1269 AMAEACSLRYGLKVAYEAGFRNLVVEMDCKKLFLQLRGKASDVTPFGRVVDDILYLASKC 1328
Query: 298 VSDKVLFTPRHGNKVAHALACLTFSYSD-RVWLEE 321
+ RH NKVAH LA + + + RVWLEE
Sbjct: 1329 SNVVFEHVKRHCNKVAHLLAQMCKNAMEKRVWLEE 1354
BLAST of Lag0041363 vs. NCBI nr
Match:
XP_021750224.1 (uncharacterized protein LOC110715912 [Chenopodium quinoa])
HSP 1 Score: 97.1 bits (240), Expect = 3.0e-16
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 0
Query: 167 PIRPIEQ--GAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCW 226
P+ P + W P +KLNTDA+ + GG +LRDA G+V +A C L +
Sbjct: 16 PVVPSQNLGSVWKAPDAGAYKLNTDANFSVQQLLGVGG-VLRDADGSVLMAYCSTLRGSY 75
Query: 227 SVDLTEGWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLH 286
VDL E A+ + + +AL++ F NF +E D+++L + + ++ G ++ D RL+
Sbjct: 76 GVDLGEAIAMRQSLGIALEVGFRNFMLETDNIKLFHHMKKGIIIPNDFGNVIRDILRLVS 135
Query: 287 PCVSDKVLFTPRHGNKVAHALACLTFSYSD-RVWLEE 321
C S F R GN VAH LA L+ ++S+ R WLEE
Sbjct: 136 QCFSCSFSFVKRFGNGVAHGLANLSSNFSEYRAWLEE 171
BLAST of Lag0041363 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 59.3 bits (142), Expect = 9.1e-08
Identity = 45/150 (30.00%), Postives = 65/150 (43.33%), Query Frame = 0
Query: 164 QPRPIRPIEQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRC 223
QPR R I W P V K+NTD + R G A G +LRD GA L + RC
Sbjct: 443 QPRVERMI---GWVSPCVGWVKVNTDGASRGNPGLASAGGVLRDCTGAWCGGFSLNIGRC 502
Query: 224 WSVDLTEGWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLL 283
S E W + G+ A + +E+DS +V L ++D+ + L+ L
Sbjct: 503 -SAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGISDSHPLSFLVRLCHGFL 562
Query: 284 HPCVSDKVLFTPRHGNKVAHALACLTFSYS 314
+++ R N++A LA FS S
Sbjct: 563 QKDWLVRIVHVYREANRLADGLANYAFSLS 588
BLAST of Lag0041363 vs. ExPASy TrEMBL
Match:
A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)
HSP 1 Score: 114.4 bits (285), Expect = 8.8e-22
Identity = 74/211 (35.07%), Postives = 101/211 (47.87%), Query Frame = 0
Query: 114 VKVFWWSVSNLRNNMCWKGESDG--RDLWAWSEEYLRAYHDVVSRCESCYNLQPRPIRPI 173
+ V W++ N RN G DL +WSE YL+ Y S + RP
Sbjct: 44 IVVLLWAIWNARNQTPQHFSLGGSLSDLVSWSENYLQVYQAAQRSSXSALVV----CRPP 103
Query: 174 EQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVDLTEG 233
W PP K+N DA+ R E A G I+RD+ G V+L A L R VD EG
Sbjct: 104 RVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEG 163
Query: 234 WALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPCVSD-K 293
+A+ +G+ LA++ F F IE DSLR+ +L + D SEVG+L + L
Sbjct: 164 FAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTDCVDDSEVGVLCSVIKLFLSSHAERVS 223
Query: 294 VLFTPRHGNKVAHALACLTFSYSD-RVWLEE 321
FT R+GN AH LA L + ++W+EE
Sbjct: 224 FSFTHRNGNAXAHLLAQLALTSPHLQIWVEE 250
BLAST of Lag0041363 vs. ExPASy TrEMBL
Match:
F4NCI4 (Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1)
HSP 1 Score: 100.5 bits (249), Expect = 1.3e-17
Identity = 69/215 (32.09%), Postives = 106/215 (49.30%), Query Frame = 0
Query: 118 WWSVSNLRNNMCWKGESDGRDLWAWSEEYLRAYHDVVSRC--------ESCYNLQPRPIR 177
WW++ + +CW GR+ W + ++ L A+ +VV R E C + P
Sbjct: 1149 WWALFWM---ICWNIWL-GRNKWVFEKKKL-AFQEVVERAVRGVMEFEEECAHTSPVETL 1208
Query: 178 PIEQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVD-- 237
+ W+ P V KLN DA+V +G GG ++RDA G V LA C W+++
Sbjct: 1209 NTHENGWSVPPVGMVKLNVDAAVFKHVGIGMGG-VVRDAEGDVLLATCCG---GWAMEDP 1268
Query: 238 -LTEGWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPC 297
+ E +L G+++A + F N +EMD +L L G+ +D + G ++DD L C
Sbjct: 1269 AMAEACSLRYGLKVAYEAGFRNLVVEMDCKKLFLQLRGKASDVTPFGRVVDDILYLASKC 1328
Query: 298 VSDKVLFTPRHGNKVAHALACLTFSYSD-RVWLEE 321
+ RH NKVAH LA + + + RVWLEE
Sbjct: 1329 SNVVFEHVKRHCNKVAHLLAQMCKNAMEKRVWLEE 1354
BLAST of Lag0041363 vs. ExPASy TrEMBL
Match:
A0A5C7ITL2 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001058 PE=3 SV=1)
HSP 1 Score: 97.1 bits (240), Expect = 1.5e-16
Identity = 59/205 (28.78%), Postives = 95/205 (46.34%), Query Frame = 0
Query: 118 WWSVSNLRNNMCWKGE-SDGRDLWAWSEEYLRAYHDVVSRCESCYNLQPRPIRPIEQGAW 177
WW V + RN E D+W W+ ++ + V + E+ L P W
Sbjct: 2 WWRVWHRRNRFLHHKEVFPVSDIWDWANVFIDDFR-VANFVETKKQLVVSP-----PPKW 61
Query: 178 TPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVDLTEGWALVK 237
+PP V FK+N+DA+ R G + GC++RD+ G V + C C+ + E A++
Sbjct: 62 SPPHVGCFKINSDAATRDRDGRSGVGCVIRDSDGYVRASLCQGFDVCYPPQVAETLAILH 121
Query: 238 GVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPCVSDKVLFTPR 297
G LA ++ +E D+L +V + + SEVG+++ D + + F PR
Sbjct: 122 GCRLAAELGLLPTVLESDALSVVEAVRLKSMPLSEVGVVIQDILEIFTSFPVFSICFVPR 181
Query: 298 HGNKVAHALACLTFSYSDR-VWLEE 321
NKV H LA L + R VW+ +
Sbjct: 182 LANKVVHGLARLAVGHVGRFVWVND 200
BLAST of Lag0041363 vs. ExPASy TrEMBL
Match:
A0A2P6SAP1 (Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0328181 PE=4 SV=1)
HSP 1 Score: 95.5 bits (236), Expect = 4.3e-16
Identity = 65/211 (30.81%), Postives = 93/211 (44.08%), Query Frame = 0
Query: 116 VFWWSVSNLRNNMCWKGE-SDGRDLWAWSEEYLRAYHDVVSRCESCYNLQPRPIRPIEQG 175
V+ W + + RNN+ W G + + W+ ++L Y V P R + G
Sbjct: 1000 VYLWVIWSERNNLVWNGSVFNAYNAAQWASKFLGEYQQV------------HPTRQKKSG 1059
Query: 176 ----AWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVDLTE 235
W P K+N D S RPE G+ G ++RD G+ A P S E
Sbjct: 1060 RTRAKWENPPTGRLKINIDGSYRPESGDGGIGVVIRDDKGSCMAAMARYFPNVLSAFHME 1119
Query: 236 GWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPCVSDK 295
A G+ LA+ + F +E D +V L+ L D SEVG ++DD + L S K
Sbjct: 1120 AEACRAGLLLAIYQEWDEFILESDCSLMVAALNQNLEDRSEVGRIIDDCKSYLTSLHSIK 1179
Query: 296 VLFTPRHGNKVAHALACLTFS-YSDRVWLEE 321
+ R N VA+ LA L S + + VWLEE
Sbjct: 1180 ISHVFREANGVANRLAHLARSKFLNDVWLEE 1198
BLAST of Lag0041363 vs. ExPASy TrEMBL
Match:
A0A1S8ABJ9 (Ribonuclease H-like superfamily protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)
HSP 1 Score: 92.4 bits (228), Expect = 3.6e-15
Identity = 54/159 (33.96%), Postives = 85/159 (53.46%), Query Frame = 0
Query: 163 LQPRPIRPIEQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPR 222
+ P+P P + W PP +KLNTDA++ E G GCI+R+ GAV A P
Sbjct: 136 IAPQPAPP-QPAIWHPPDPPRYKLNTDAALDKEGGVTGLGCIIRNHQGAVMAAVTSKKPY 195
Query: 223 CWSVDLTEGWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRL 282
V++ E A+++G++LA +++ S IE DS +V + ++ EV ++ + R L
Sbjct: 196 FGDVEIAEALAILEGLKLAAEVALSPHLIESDSKNVVNFILKGISSRGEVDWILCEIRVL 255
Query: 283 LHPCVSDKVLFTPRHGNKVAHALACLTFSYS-DRVWLEE 321
+ + +TP N VAHALA + S S RVW++E
Sbjct: 256 MEQNNQYRKTYTPTSCNLVAHALAKMALSNSTPRVWIDE 293
BLAST of Lag0041363 vs. TAIR 10
Match:
AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 63.9 bits (154), Expect = 2.6e-10
Identity = 58/206 (28.16%), Postives = 89/206 (43.20%), Query Frame = 0
Query: 113 LVKVFWWSVSNLRNNMCWKGESDGRDLWAWSEEYLRAYHDVVSRCESCYNLQPRPIRP-I 172
LV W + RN + +KG+ + E LR + + L+ + P +
Sbjct: 76 LVPWLLWRLWKSRNELMFKGKEYD------APEVLRRAMEDFEEWSTRRELEGKASGPQV 135
Query: 173 EQG---AWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRCWSVDL 232
E+ W P K NTDA+ + E G ILR+ G V ALPR +V
Sbjct: 136 ERNLSVQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPRTKNVLE 195
Query: 233 TEGWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLLHPCVS 292
E AL V + ++ E D+ LV +L+ + + ++D ++LLH
Sbjct: 196 AELEALRWAVLTMSRFNYKRIIFESDAQALVNLLNSD-DFWPTLQPALEDIQQLLHHFEE 255
Query: 293 DKVLFTPRHGNKVAHALACLTFSYSD 315
K FTPR GNKVA +A + S+S+
Sbjct: 256 VKFEFTPRGGNKVADRIARESISFSN 274
BLAST of Lag0041363 vs. TAIR 10
Match:
AT5G42905.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 49.3 bits (116), Expect = 6.7e-06
Identity = 39/121 (32.23%), Postives = 54/121 (44.63%), Query Frame = 0
Query: 164 QPRPIRPIEQGAWTPPVVDEFKLNTDASVRPEMGEAEGGCILRDAFGAVFLAACLALPRC 223
QPR R I W P V K+NTD + R G A G +LRD GA L + RC
Sbjct: 131 QPRVERLI---GWVLPCVGWVKVNTDGASRGNPGLASAGGVLRDCEGAWCGGFSLNIGRC 190
Query: 224 WSVDLTEGWALVKGVELALQMSFSNFCIEMDSLRLVRILHGELTDASEVGLLMDDARRLL 283
S E W + G+ A + +E+DS +V L ++D+ + L+ RL
Sbjct: 191 -SAQHAELWGVYYGLYFAWEKKVPRVELEVDSEAIVGFLKTGISDSHPLSFLV----RLC 243
Query: 284 H 285
H
Sbjct: 251 H 243
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C2F6 | 9.1e-08 | 30.00 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DBJ7 | 8.8e-22 | 35.07 | uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
F4NCI4 | 1.3e-17 | 32.09 | Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris... | [more] |
A0A5C7ITL2 | 1.5e-16 | 28.78 | RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001058 ... | [more] |
A0A2P6SAP1 | 4.3e-16 | 30.81 | Putative RNA-directed DNA polymerase OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1... | [more] |
A0A1S8ABJ9 | 3.6e-15 | 33.96 | Ribonuclease H-like superfamily protein (Fragment) OS=Citrus limon OX=2708 PE=4 ... | [more] |
Match Name | E-value | Identity | Description | |
AT2G34320.1 | 2.6e-10 | 28.16 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
AT5G42905.1 | 6.7e-06 | 32.23 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |