Lag0041362 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041362
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	MLP-like protein 328
Location	chr13: 16572491 .. 16573046 (+)
RNA-Seq Expression	Lag0041362
Synteny	Lag0041362

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCTTTGTGGAAAGTTTGTGAGTGAATCAGAAATAAATGCAGCTGCACACAAACTTTACAAAATCTTCAAACATACATGTTTCGATGTTCCAAATATTTGTCCAAACATAGTCCAAAAAGTTGAAATTCATGAAGGGAACTGGGATAGCCATGACAACGGCTCCATCAAGATCTGGTATTACAATATCGGTACGTATAAAATAATCATAACTATGATCACTTGTTTTATGATCCTCTTCTAAATAATTATGATATATCTTTTTGTGTTATTGTATGATTTGTTAAGAGGGTAAGTTTGAAGTTTTTAAAGAACGAGTGGAATTCGATGACGAAAAGCTGGTGATATTCTTGACTGGACTGGAAGGAGATGTGTTCAAGCATTACAAAACCTACAACTTGACATTTCAAGCTATTCCAAAGGGACCTAAGCATTGCTTGGCAGTTTTGACAGTGGACTTTGAGAAACTTCATGATGACTGTCCTCATCCTCACAAGTACCTCGATCTCCTAACTAACTTCATCAAGGGCTTTGAATCTCATCTTAAAGAATAA

mRNA sequence

ATGTCTCTTTGTGGAAAGTTTGTGAGTGAATCAGAAATAAATGCAGCTGCACACAAACTTTACAAAATCTTCAAACATACATGTTTCGATGTTCCAAATATTTGTCCAAACATAGTCCAAAAAGTTGAAATTCATGAAGGGAACTGGGATAGCCATGACAACGGCTCCATCAAGATCTGGTATTACAATATCGAGGGTAAGTTTGAAGTTTTTAAAGAACGAGTGGAATTCGATGACGAAAAGCTGGTGATATTCTTGACTGGACTGGAAGGAGATGTGTTCAAGCATTACAAAACCTACAACTTGACATTTCAAGCTATTCCAAAGGGACCTAAGCATTGCTTGGCAGTTTTGACAGTGGACTTTGAGAAACTTCATGATGACTGTCCTCATCCTCACAAGTACCTCGATCTCCTAACTAACTTCATCAAGGGCTTTGAATCTCATCTTAAAGAATAA

Coding sequence (CDS)

ATGTCTCTTTGTGGAAAGTTTGTGAGTGAATCAGAAATAAATGCAGCTGCACACAAACTTTACAAAATCTTCAAACATACATGTTTCGATGTTCCAAATATTTGTCCAAACATAGTCCAAAAAGTTGAAATTCATGAAGGGAACTGGGATAGCCATGACAACGGCTCCATCAAGATCTGGTATTACAATATCGAGGGTAAGTTTGAAGTTTTTAAAGAACGAGTGGAATTCGATGACGAAAAGCTGGTGATATTCTTGACTGGACTGGAAGGAGATGTGTTCAAGCATTACAAAACCTACAACTTGACATTTCAAGCTATTCCAAAGGGACCTAAGCATTGCTTGGCAGTTTTGACAGTGGACTTTGAGAAACTTCATGATGACTGTCCTCATCCTCACAAGTACCTCGATCTCCTAACTAACTTCATCAAGGGCTTTGAATCTCATCTTAAAGAATAA

Protein sequence

MSLCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIWYYNIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPKGPKHCLAVLTVDFEKLHDDCPHPHKYLDLLTNFIKGFESHLKE

Homology

[Close]

BLAST of Lag0041362 vs. NCBI nr
Match: XP_022155165.1 (MLP-like protein 328 [Momordica charantia])

HSP 1 Score: 225.3 bits (573), Expect = 3.5e-55
Identity = 101/151 (66.89%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 1   MSLCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIW 60
           MSLCGKFVSE EINA A K YKIFK   F VPNI PNI+Q+VE+HEG+WD+H +GSIKIW
Sbjct: 1   MSLCGKFVSELEINAPAEKYYKIFKDQAFHVPNISPNIIQQVEVHEGDWDNHGHGSIKIW 60

Query: 61  YYNIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPKGPKHCLAVLTV 120
            Y I+GK EVFKERVEFDD+K  + L GLEGDVF HYK++  T+Q +PKGP+H LAVLT+
Sbjct: 61  NYTIDGKTEVFKERVEFDDDKYAVTLIGLEGDVFNHYKSFKGTYQVVPKGPEHSLAVLTL 120

Query: 121 DFEKLHDDCPHPHKYLDLLTNFIKGFESHLK 152
           +FEK+ D  P+P+KYLDL+ N  K  ESHLK
Sbjct: 121 EFEKIDDGSPYPYKYLDLMNNITKDIESHLK 151

[Close]

BLAST of Lag0041362 vs. NCBI nr
Match: KAG6600805.1 (MLP-like protein 328, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 224.2 bits (570), Expect = 7.8e-55
Identity = 98/151 (64.90%), Postives = 117/151 (77.48%), Query Frame = 0


Query: 1   MSLCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIW 60
           MSL GK VSE EINAAA K YK+FK  CF VPNI P  +Q VEIHEG+WDSHD+GSIK W
Sbjct: 1   MSLVGKLVSELEINAAAEKYYKVFKDQCFHVPNITPKFIQHVEIHEGDWDSHDHGSIKTW 60

Query: 61  YYNIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPKGPKHCLAVLTV 120
           +Y ++GK EVFKERVEF DEK  + L GLEGDVF HYKT+   +Q +PKGP HCLAVLT+
Sbjct: 61  HYTVDGKSEVFKERVEFHDEKFTVVLVGLEGDVFNHYKTFKPVYQVVPKGPSHCLAVLTI 120

Query: 121 DFEKLHDDCPHPHKYLDLLTNFIKGFESHLK 152
           ++EKL D  P+P++Y+DL+ N  K  ESHLK
Sbjct: 121 EYEKLDDGSPYPYQYIDLMNNITKDIESHLK 151

[Close]

BLAST of Lag0041362 vs. NCBI nr
Match: XP_022942348.1 (MLP-like protein 328 [Cucurbita moschata] >KAG6600803.1 MLP-like protein 328, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 223.8 bits (569), Expect = 1.0e-54
Identity = 99/151 (65.56%), Postives = 122/151 (80.79%), Query Frame = 0


Query: 1   MSLCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIW 60
           MSL GKFVSE E+NAAAHK YK+FKH    +PNI P I + VE+HEG+WD+H +GSIKIW
Sbjct: 1   MSLRGKFVSELELNAAAHKYYKVFKHQVSHIPNISPGIFKNVEVHEGDWDTHGHGSIKIW 60

Query: 61  YYNIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPKGPKHCLAVLTV 120
            YNI+GK EVFKE+VEFDDEKL + L GLEGDVF+HYKT+   +Q +PKGP+HCLAVLT+
Sbjct: 61  NYNIDGKDEVFKEQVEFDDEKLAVTLIGLEGDVFEHYKTFKGIYQVVPKGPEHCLAVLTL 120

Query: 121 DFEKLHDDCPHPHKYLDLLTNFIKGFESHLK 152
           ++EKL D  P+P+KYLDL+ N  +  ESHLK
Sbjct: 121 EYEKLDDGSPYPYKYLDLMNNLTRDIESHLK 151

[Close]

BLAST of Lag0041362 vs. NCBI nr
Match: XP_022150052.1 (MLP-like protein 328 [Momordica charantia])

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-54
Identity = 100/151 (66.23%), Postives = 119/151 (78.81%), Query Frame = 0


Query: 1   MSLCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIW 60
           MSLCGKFVSE EINA A K YKIFK   F VPNI PNI+Q++++HEG+WDSH +GSIKIW
Sbjct: 1   MSLCGKFVSELEINAPAEKYYKIFKDQAFHVPNISPNIIQQIQVHEGDWDSHGHGSIKIW 60

Query: 61  YYNIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPKGPKHCLAVLTV 120
            Y I+GK EVFKERVEFDDEK  + L GLEGDVF HYKT+   +Q +PK P+H LAVLT+
Sbjct: 61  NYTIDGKTEVFKERVEFDDEKFAVTLVGLEGDVFNHYKTFKGIYQVVPKDPEHSLAVLTL 120

Query: 121 DFEKLHDDCPHPHKYLDLLTNFIKGFESHLK 152
           ++EKL D  P+P+KYLDL+ N  K  ESHLK
Sbjct: 121 EYEKLDDGSPYPYKYLDLMNNITKDIESHLK 151

[Close]

BLAST of Lag0041362 vs. NCBI nr
Match: XP_023553763.1 (MLP-like protein 328 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 2.3e-54
Identity = 99/151 (65.56%), Postives = 122/151 (80.79%), Query Frame = 0


Query: 1   MSLCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIW 60
           MSL GKFVSE E+NAAAHK YK+FKH    +PNI P I + VE+HEG+WD+H +GSIKIW
Sbjct: 1   MSLRGKFVSELELNAAAHKYYKLFKHQVSHIPNISPGIFKNVEVHEGDWDTHGHGSIKIW 60

Query: 61  YYNIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPKGPKHCLAVLTV 120
            YNI+GK EVFKE+VEFDDEKL + L GLEGDVF+HYKT+   +Q +PKGP+HCLAVLT+
Sbjct: 61  NYNIDGKDEVFKEQVEFDDEKLSVTLIGLEGDVFEHYKTFKGIYQVVPKGPEHCLAVLTL 120

Query: 121 DFEKLHDDCPHPHKYLDLLTNFIKGFESHLK 152
           ++EKL D  P+P+KYLDL+ N  +  ESHLK
Sbjct: 121 EYEKLDDGSPYPYKYLDLMNNLTRDIESHLK 151

[Close]

BLAST of Lag0041362 vs. ExPASy Swiss-Prot
Match: Q9ZVF3 (MLP-like protein 328 OS=Arabidopsis thaliana OX=3702 GN=MLP328 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.0e-26
Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 1   MSLCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIW 60
           M+  G +V+E  +  +A K YK ++      P+   + +Q V IH+G WDSH  G+IKIW
Sbjct: 1   MATSGTYVTEVPLKGSAEKHYKRWRSENHLFPDAIGHHIQGVTIHDGEWDSH--GAIKIW 60

Query: 61  YYNIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPKGPKHCLAVLTV 120
            Y  +GK EVFKER E DDE + +   GLEG V +  K Y++ FQ I K P   +  +T+
Sbjct: 61  NYTCDGKPEVFKERREIDDENMAVTFRGLEGHVMEQLKVYDVIFQFIQKSPDDIICKITM 120

Query: 121 DFEKLHDDCPHPHKYLDLLTNFIKGFESHL 151
            +EK +DD P P  Y+  + +     + H+
Sbjct: 121 IWEKQNDDMPEPSNYMKFVKSLAADMDDHV 148

[Close]

BLAST of Lag0041362 vs. ExPASy Swiss-Prot
Match: Q9ZVF2 (MLP-like protein 329 OS=Arabidopsis thaliana OX=3702 GN=MLP329 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.3e-25
Identity = 57/150 (38.00%), Postives = 85/150 (56.67%), Query Frame = 0


Query: 1   MSLCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIW 60
           M+  G +V+E  +  +A K YK ++      P+   + +Q V +H+G WDSH+  +IKIW
Sbjct: 1   MATSGTYVTEVPLKGSADKHYKRWRDENHLFPDAIGHHIQGVTVHDGEWDSHE--AIKIW 60

Query: 61  YYNIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPKGPKHCLAVLTV 120
            Y  +GK EVFKER E DDE +VI   GLEG V +  K Y+L +Q   K P   +  +T+
Sbjct: 61  NYTCDGKPEVFKERKEIDDENMVITFRGLEGHVMEQLKVYDLIYQFSQKSPDDIVCKITM 120

Query: 121 DFEKLHDDCPHPHKYLDLLTNFIKGFESHL 151
            +EK  DD P P  Y+  L + +   + H+
Sbjct: 121 IWEKRTDDSPEPSNYMKFLKSVVADMDEHV 148

[Close]

BLAST of Lag0041362 vs. ExPASy Swiss-Prot
Match: Q06394 (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.8e-20
Identity = 54/149 (36.24%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 3   LCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIWYY 62
           L GK V ESE+N  A K YK++KH   D+P++ P+I   V+  EG+  +  +G +K W Y
Sbjct: 10  LVGKLVMESEVNCNADKYYKLYKHH-EDLPSVIPHIYTSVKAVEGHGTT--SGCVKEWGY 69

Query: 63  NIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPKGPKH-CLAVLTVD 122
            +EGK    KE+  ++DE   I    + GD+   YK ++ T    PK   H C+   T+D
Sbjct: 70  ILEGKPLSCKEKTTYNDETRTIHHMVVAGDLMNDYKKFDATLVVNPKSNGHGCIVKWTID 129

Query: 123 FEKLHDDCPHPHKYLDLLTNFIKGFESHL 151
           +EK+++D P P  YL       +   SHL
Sbjct: 130 YEKMNEDSPVPFGYLACYQQITEDLSSHL 155

[Close]

BLAST of Lag0041362 vs. ExPASy Swiss-Prot
Match: Q941R6 (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2)

HSP 1 Score: 98.6 bits (244), Expect = 6.5e-20
Identity = 55/151 (36.42%), Postives = 80/151 (52.98%), Query Frame = 0


Query: 2   SLCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIWY 61
           SLCGK  ++ EI A+A K + +F      V    P  +Q  E+HEG+W     GSI  W 
Sbjct: 19  SLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGK--VGSIVFWN 78

Query: 62  YNIEGKFEVFKERVE-FDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPK-GPKHCLAVLT 121
           Y  +G+ +V KER+E  + EK +I    +EGD+ K YK++ +T Q  PK G    +    
Sbjct: 79  YVHDGEAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWH 138

Query: 122 VDFEKLHDDCPHPHKYLDLLTNFIKGFESHL 151
           V++EK+ D   HP  +LD      K  + HL
Sbjct: 139 VEYEKIDDKVAHPETFLDFCVEVSKEIDEHL 167

[Close]

BLAST of Lag0041362 vs. ExPASy Swiss-Prot
Match: P19825 (Major latex protein 15 OS=Papaver somniferum OX=3469 GN=MLP15 PE=2 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 4.2e-19
Identity = 54/149 (36.24%), Postives = 80/149 (53.69%), Query Frame = 0


Query: 3   LCGKFVSESEINAAAHKLYKIFKHTCFDVPNICPNIVQKVEIHEGNWDSHDNGSIKIWYY 62
           L GK ++ESE+N  A K Y+IFKH   D+P+  P+I   V+  EG+  +  +G +K W Y
Sbjct: 10  LVGKLITESEVNCNADKYYQIFKHH-EDLPSAIPHIYTSVKAVEGHGTT--SGCVKEWCY 69

Query: 63  NIEGKFEVFKERVEFDDEKLVIFLTGLEGDVFKHYKTYNLTFQAIPK-GPKHCLAVLTVD 122
            +EGK    KE+  ++DE   I   G+EG +   YK +  T    PK   +  +    VD
Sbjct: 70  ILEGKPLTVKEKTTYNDETRTINHNGIEGGMMNDYKKFVATLVVKPKANGQGSIVTWIVD 129

Query: 123 FEKLHDDCPHPHKYLDLLTNFIKGFESHL 151
           +EK+++D P P  YL      I+   SHL
Sbjct: 130 YEKINEDSPVPFDYLAFFQQNIEDLNSHL 155

The following BLAST results are available for this feature:

BLAST of Lag0041362 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155165.1	3.5e-55	66.89	MLP-like protein 328 [Momordica charantia]	[more]
KAG6600805.1	7.8e-55	64.90	MLP-like protein 328, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022942348.1	1.0e-54	65.56	MLP-like protein 328 [Cucurbita moschata] >KAG6600803.1 MLP-like protein 328, pa...	[more]
XP_022150052.1	1.7e-54	66.23	MLP-like protein 328 [Momordica charantia]	[more]
XP_023553763.1	2.3e-54	65.56	MLP-like protein 328 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0041362 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVF3	6.0e-26	38.00	MLP-like protein 328 OS=Arabidopsis thaliana OX=3702 GN=MLP328 PE=2 SV=1	[more]
Q9ZVF2	2.3e-25	38.00	MLP-like protein 329 OS=Arabidopsis thaliana OX=3702 GN=MLP329 PE=2 SV=1	[more]
Q06394	3.8e-20	36.24	Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1	[more]
Q941R6	6.5e-20	36.42	MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2	[more]
P19825	4.2e-19	36.24	Major latex protein 15 OS=Papaver somniferum OX=3469 GN=MLP15 PE=2 SV=2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 2..152 e-value: 4.2E-42 score: 155.9
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 3..150 e-value: 1.3E-43 score: 148.5
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 1..151 e-value: 8.9E-42 score: 144.6
None	No IPR available	PANTHER	PTHR31338:SF20	BNAA01G13350D PROTEIN	coord: 1..151
None	No IPR available	PANTHER	PTHR31338	POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN	coord: 1..151
None	No IPR available	CDD	cd07816	Bet_v1-like	coord: 5..152 e-value: 1.31372E-31 score: 108.431
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 6..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0041362.1	Lag0041362.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response