Lag0041343 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041343
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr13: 16079965 .. 16084051 (-)
RNA-Seq Expression	Lag0041343
Synteny	Lag0041343

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTGTGATCTTTCTTGTAGTTGGGCTCGATCCTACGTGTTTCCTCAGGTAGATACTATGATGGTTCTATCTATTCCTCAATGATGGTCCAAAATCACCTATAACAATTATTATTATATATTTCCGACAAAAAGAGACTTAACTTTTAGATTAGAAAAAAAAGGATAATTATATACTAATTTTCATTGAATTAATTATTTTTCTTCTCATAAAAAATAAGGTAAAGGAGGGCAATTATTTATTAACCCTTTTCAAATCACATGATTTGCATATATGACTGTAATTATACGAAAGCGATAGTCTAAAAGGTCATCATTTATAGTTCAAAGTTTGATGAAGGACGTGCCTTTGTTGTGGGAAAGTTGTACATTTATCATTTCAATGACCCATGAAGCATGTGTCAAACAAAAATGATTATTTAGTTTTTTTTTTTTTTGAAATAACAAAAATGATTAAAAACTTTAGCAAATGATTAAGATTCATGAGATCAAGATTGAATCATATTACCAACTTTTTAAGAGGATAGAGTTGTTTTGTAAAACAATAAAAAGAAAAAAGGAAAAAAAAATGTTGTTTGGTAACTATTTAGAAAAATAGGTCTACATTTGTAGAAAGCATTTTGATTGTCTAGGACAGGTTAAATAACTATTTAGATTTTGGTCTTTTATTTTTTAAAATTAAGCTTACAAACACTATTTCTACAAGTTTTTTTTTTCTACTTTCTTCCTTTTTTTTTTTTTTAAAAAAAAAAAACAAGTCAAGTTTTGAAAACTATTGTAAAAAAATTGGGAGAAAAACGAGTATAATTTTCAAAAACCAAATGGTTATCGAATGGGGCCTTATAGGTAGGAGTTTTCTCTTTTGTAAAGATTTTTTTTTCTCTCCATGTGTCATTGTGTATATTATTGTGTTTGGTTGCAAGCATATTTTTGTGGGAATATTTCTTTTATTCTTATTTATTCTAATTAAAATTGGAGTTGAATAAGTTCCCTTTCTTAAAATTTACTCTTGTTATAGGTAATTTTGGACCACACAGACGCACAAGGAGCTGACGAGGACAATCGGGCAGAGGTAGGACCAAAAGAACGACCCAGAGGAAGATCGGACCAAAGGGTCGGGCCAACACAACCCGACCCATATGGACGACCTCGGCCTTTTGCCGAGGCCGAGCATATGGTCGGCCTTGGGAAAAGGCCGAGGCTAAGTCCGGTGACCTCCTTCCGGTCCCTGACGCCCCGGATCGCCCCGGTTCTGCCTGGTTCGTTTCGAAACACCTCCGAATTCCTAAAAACCCTAGGAGGACAAACAGGTATAAAAACTCCTTTTCATCACGGAAGAAGGGTTCCGAAAACTCTACTCCTGACTCTCCCCTTACTATCTATAGCTTCTCCTTGGTTTTCTGACTTAGGCATCGGAGGCAGTATGGCCTACACCACACCGGTGTGCAGCGGTTTTTCCTGGTTTTGCAGGTCACGTCTTCCCCAATTTCTACAAATTCACTGTTGGTGTCACGTGAAGGTCACGTGAGTCTTCTGTCCAGATTTTGACATCAACAGTTGGCGTCGTCTGTGGGGAAGAGTGCTTGCCAGTTTAAATCGCGCATCGGTGGTGATCTGCAGAATGGATCGAGTTCAGAAACCAGAGGGAAGCCTCGGATATGAGCAGAAAGCATCGAGTCAGACTGGGGCCGGTCTCGGTAGGGAAAAGGCCGACCCTAACTTCGAAGACTGTGGTAAGGTTCCAGGTGTTAATGATGCTGCTGGACCCGACCCGAGAGGACATCCGGCGGAAGAACTGGAATCTGTGCCACTAACATCCGAAGAAATTTCCTTCGTGACAATCTCTATTCCCAAGGATTTATTTTTGGTAATTTTGTTTAAATTTTCAATCAATGTTCTCAATTGACCATTTTTCTTCTTGGGAAATTTCCTTCATTTTTCCTAATTAAACATCAAGGTTCTTTTAATCTTTACCCAAAAAAACATCACTTTTGTATTCTCATTAATATTAAAGTGTTTTTCTTTTTAGCCTTTTAACCAATCATGAATTTTTATTATTAGACTCAATCTACCAAATGGCCTCTAATCTTTTTAGTAATTCTAAGTTTGGTCTATGCTTAGCGGTAATTGGCTTGTACTCTCTATCAAGAGGTATCAAGAGGTTAGAGGTTAGAATACAAAATTAATTTCTTTCAAGTAGGAGATGTGCATATCAAATATGTTAATAAAATAATAATTCAACATGTAAAATTTTTATTAATAGACTATAATTGGTTTTTAACACTCTGTTTGAGAACCATTTGGTTAAATTATGCTTGTTTTTATTAATACCATATTAAGGATGCAGGGAGTAAATAAAACTTGCTTGAGATCTTTCATTAATAATGCAAGCCATATAAATACGCACCAAGAATACAGCTTATCAGTTAGTTTGAATAACAAACATGGGAAACTAATATAACTAACTGACTTTAACCAAAAACTAATTACAAGTTTCTATTTATCATAATAGTTTTCTCCTAAATTCTCTACCATGGTTTTCATCCTAGTTAAAGTTCCATTTGAATTCCTAGCTAAATTTTAAAAACAAAAACGAGTTTTTGAAAACTACTTTTTGTTGTTTCCAAAATTGGACTTAGTTTTTGAAAACAAGGCAGACGATTGATACTAAAACTCATGGACCAAAGTATAACCTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTTTAATTTACAAACATTTTGAATATGTCAAAAACCTATTGGATATTAATTGAAACTTATATCAATATTATAAAATTTTTTTAAAAAAAAATCCAAGGACCTATTAGATTTTTTTTAGTTCAAAGACTATATAGATCCATATCTAAAATTTCACGGACTAAACTTATAATTTCATCTAGTATGAACTTGTGCCCCCTACCATCAAGTTCTGGATCTGCCACTAGTTGCCACTGCTATCTTCAAAACCGACCACACACCCACTCCCTTCTTCTTCTACTCCTCCCCTTCTAATTATTCTTTTTCAAAACCCAAACTCATCCTCACCCATTCTTCTTTTTCTTCAAAACCCAAACCCAAAATCTTGAATCTTAAAAATCATACAAAAACAAGGGAAATTCTACTGTATGGCTAAATTAAAATAATCGTTTTGAAATTTGACTAAACCGCAAAGGTTTTTAAAGAATGCATTTTTTAAACATTTTGTATAAAAATTGTTTAGAATTTAAACATTCATATGTTTAGTTACAATTCTCATGTTTTTATACAAGTTATGATATACTTAAAGCTCTTTTGTAATCAAAACAATACCAAAAACCAGCACCAACACAGTAGTAATCAGACCAACTCAGGCAACAACAAACTCAATAACCCAGCAGACCACAATCGAAGCAATAATCATAAACCAAATAACAGAGAGATAGGGAAGAGAGATAACCAACACAGAGAATTACAGTGGTTAATTCTCTCGAGAGCCCACTCAATAACGAATTTTGTTGGTTAATTATACCCTGTGCACAAATCCCAGCTGAGGTATCTTCTTTGAAAACTCATACCTGGAAAAAAGAAAAAATAAAAAAAGAAAGAAGAAAAAAAAGAGAAGAGAGAGATGAGGGAGAGGGAGAGGGAGAGGGAGAGGAAGAAGAAAAAGAAGAAGTGGCGGTGTCCGCACCGGTACTAGGTCAAAGAGGTTGGAGAGGAGAAGGAAGAGGGGAGAGACTTTCTTAAAAAAAATATTATTATTTATTTTTAAATTAAATTAAATATTATTATTTTGGGAAACCCAGTTTGCCGCCGACTGTCGAATGAAACCCACTCTTCCTCTCGATAAACCCACGACTGTCGAACGAAACCCTCGCCTGAAACGAAGGGGTCCCCTTCCCACGAACTCAGCAAGCAACGTCGTCCACGGGATAAAACCCACGAGTAGCGGCATCGTGGGTTTGAGCAGCATGGGTTTGAAATCGAACCTCGAGCGACGGACCAACATCTCCACGACGAATGAACCTGCAGCTTCAACGGAACGGGCGATGGATTCGAAGGGGGAAACCCCTTCGTTTTTTTTAACTTTGCAATAG

mRNA sequence

ATGTCGTGTGATCTTTCTTGTAGTTGGGCTCGATCCTACGTGTTTCCTCAGGTAATTTTGGACCACACAGACGCACAAGGAGCTGACGAGGACAATCGGGCAGAGGTAGGACCAAAAGAACGACCCAGAGGAAGATCGGACCAAAGGGTCGGGCCAACACAACCCGACCCATATGGACGACCTCGGCCTTTTGCCGAGGCCGAGCATATGGTCGGCCTTGGGAAAAGGCCGAGGCTAAGTCCGGTGACCTCCTTCCGGTCCCTGACGCCCCGGATCGCCCCGGTTCTGCCTGGTTCGTTTCGAAACACCTCCGAATTCCTAAAAACCCTAGGAGGACAAACAGGCATCGGAGGCAGTATGGCCTACACCACACCGGTGTGCAGCGGTTTTTCCTGGTTTTGCAGTTGGCGTCGTCTGTGGGGAAGAGTGCTTGCCAGTTTAAATCGCGCATCGGTGGTGATCTGCAGAATGGATCGAGTTCAGAAACCAGAGGGAAGCCTCGGATATGAGCAGAAAGCATCGAGTCAGACTGGGGCCGGTCTCGGTAGGGAAAAGGCCGACCCTAACTTCGAAGACTGTGGTAAGGTTCCAGGTGTTAATGATGCTGCTGGACCCGACCCGAGAGGACATCCGGCGGAAGAACTGGAATCTGTGCCACTAACATCCGAAGAAATTTCCTTCGTGACAATCTCTATTCCCAAGGATTTATTTTTGTTTGCCGCCGACTGTCGAATGAAACCCACTCTTCCTCTCGATAAACCCACGACTGTCGAACGAAACCCTCGCCTGAAACGAAGGGGTCCCCTTCCCACGAACTCAGCAAGCAACGTCGTCCACGGGATAAAACCCACGAGTAGCGGCATCGTGGGTTTGAGCAGCATGGGTTTGAAATCGAACCTCGAGCGACGGACCAACATCTCCACGACGAATGAACCTGCAGCTTCAACGGAACGGGCGATGGATTCGAAGGGGGAAACCCCTTCGTTTTTTTTAACTTTGCAATAG

Coding sequence (CDS)

ATGTCGTGTGATCTTTCTTGTAGTTGGGCTCGATCCTACGTGTTTCCTCAGGTAATTTTGGACCACACAGACGCACAAGGAGCTGACGAGGACAATCGGGCAGAGGTAGGACCAAAAGAACGACCCAGAGGAAGATCGGACCAAAGGGTCGGGCCAACACAACCCGACCCATATGGACGACCTCGGCCTTTTGCCGAGGCCGAGCATATGGTCGGCCTTGGGAAAAGGCCGAGGCTAAGTCCGGTGACCTCCTTCCGGTCCCTGACGCCCCGGATCGCCCCGGTTCTGCCTGGTTCGTTTCGAAACACCTCCGAATTCCTAAAAACCCTAGGAGGACAAACAGGCATCGGAGGCAGTATGGCCTACACCACACCGGTGTGCAGCGGTTTTTCCTGGTTTTGCAGTTGGCGTCGTCTGTGGGGAAGAGTGCTTGCCAGTTTAAATCGCGCATCGGTGGTGATCTGCAGAATGGATCGAGTTCAGAAACCAGAGGGAAGCCTCGGATATGAGCAGAAAGCATCGAGTCAGACTGGGGCCGGTCTCGGTAGGGAAAAGGCCGACCCTAACTTCGAAGACTGTGGTAAGGTTCCAGGTGTTAATGATGCTGCTGGACCCGACCCGAGAGGACATCCGGCGGAAGAACTGGAATCTGTGCCACTAACATCCGAAGAAATTTCCTTCGTGACAATCTCTATTCCCAAGGATTTATTTTTGTTTGCCGCCGACTGTCGAATGAAACCCACTCTTCCTCTCGATAAACCCACGACTGTCGAACGAAACCCTCGCCTGAAACGAAGGGGTCCCCTTCCCACGAACTCAGCAAGCAACGTCGTCCACGGGATAAAACCCACGAGTAGCGGCATCGTGGGTTTGAGCAGCATGGGTTTGAAATCGAACCTCGAGCGACGGACCAACATCTCCACGACGAATGAACCTGCAGCTTCAACGGAACGGGCGATGGATTCGAAGGGGGAAACCCCTTCGTTTTTTTTAACTTTGCAATAG

Protein sequence

MSCDLSCSWARSYVFPQVILDHTDAQGADEDNRAEVGPKERPRGRSDQRVGPTQPDPYGRPRPFAEAEHMVGLGKRPRLSPVTSFRSLTPRIAPVLPGSFRNTSEFLKTLGGQTGIGGSMAYTTPVCSGFSWFCSWRRLWGRVLASLNRASVVICRMDRVQKPEGSLGYEQKASSQTGAGLGREKADPNFEDCGKVPGVNDAAGPDPRGHPAEELESVPLTSEEISFVTISIPKDLFLFAADCRMKPTLPLDKPTTVERNPRLKRRGPLPTNSASNVVHGIKPTSSGIVGLSSMGLKSNLERRTNISTTNEPAASTERAMDSKGETPSFFLTLQ

Homology

The following BLAST results are available for this feature:

BLAST of Lag0041343 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0041343 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0041343 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0041343 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..47
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..316

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0041343.1	Lag0041343.1	mRNA