Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAGTGTCAAGAGGCCTCATTGTCAAATGTGGAAAAGGAGACTACTTGGTGGAATAGGGTGTGGAAGATGAGAGTGCCTAGCAAAGTGAAAATTTTCTTCTGGAAAACTGTTCACAACTCTATCCCAACTATGGTAAACCTACGGAATCATCATGTATCGGTTAACGGGAATTGCCCGGTTTGCCAGGAGGAGATGGAGACTTCAGACCATGCCCTCTTTCAGTGTACGAGGGCTCGTGAGGTATGGGACCTTCTTTATCCACCAATGATGAGGAATTTATGGGTTCATATGGATATTAAAGACTACTGGTTGAGTTTGGCTGACAATCCAATGGAGGTCTTAGAGCGTATTTGTGTGGGGACCTGGTCAATTTGGAACGACAGGAATAACTCGTTACATCAGTGTCAAATCCCTAATCCAAAGCTTAGATGTGAATGGATTAATGACTATCTGTCTGAGTTCTTGAAGGCCAACCCGAAAGGCGGTGCCTTTGTTCAAACGGAGAAAGATATTGTTAATCTCATTTCAGATGGTGAAGATATTATTATGCACACTGACGCATCTGTCATGGGTACGTAAAGAAAATTCGGTATTGGAATAGTTTTGCGTGATAAACAGGGGCATCTCAAGCTGGTGAGAAATCTATCTTCTCAGGCTGGTAACTCTTCGTTGGAAGCGGAAGCAATAGCGGTGCTTGAAGGGATGCGTCTGGCTAGATCTTTGAATGTGCAACAATTCACTGTGTTGTCTGATTCTTTGACTTTGATAAATTTGATCAATGAGAAGATTCAGGGGGAGGCCTATGTTGCTGCGACTCTCTAG
mRNA sequence
ATGATGAAGTGTCAAGAGGCCTCATTGTCAAATGTGGAAAAGGAGACTACTTGGTGGAATAGGGTGTGGAAGATGAGAGTGCCTAGCAAAGTGAAAATTTTCTTCTGGAAAACTGTTCACAACTCTATCCCAACTATGGTAAACCTACGGAATCATCATGTATCGGTTAACGGGAATTGCCCGGTTTGCCAGGAGGAGATGGAGACTTCAGACCATGCCCTCTTTCAGTGTACGAGGGCTCGTGAGGTATGGGACCTTCTTTATCCACCAATGATGAGGAATTTATGGGTTCATATGGATATTAAAGACTACTGGTTGAGTTTGGCTGACAATCCAATGGAGGTCTTAGAGCGTATTTGTGTGGGGACCTGGTCAATTTGGAACGACAGGAATAACTCGTTACATCAGTGTCAAATCCCTAATCCAAAGCTTAGATGTGAATGGATTAATGACTATCTGTCTGAGTTCTTGAAGGCCAACCCGAAAGGCGGTGCCTTTGTTCAAACGGAGAAAGATATTGTTAATCTCATTTCAGATGTTTTGCGTGATAAACAGGGGCATCTCAAGCTGGTGAGAAATCTATCTTCTCAGGCTGGTAACTCTTCGTTGGAAGCGGAAGCAATAGCGGTGCTTGAAGGGATGCGTCTGGCTAGATCTTTGAATGTGCAACAATTCACTGTGTTGTCTGATTCTTTGACTTTGATAAATTTGATCAATGAGAAGATTCAGGGGGAGGCCTATGTTGCTGCGACTCTCTAG
Coding sequence (CDS)
ATGATGAAGTGTCAAGAGGCCTCATTGTCAAATGTGGAAAAGGAGACTACTTGGTGGAATAGGGTGTGGAAGATGAGAGTGCCTAGCAAAGTGAAAATTTTCTTCTGGAAAACTGTTCACAACTCTATCCCAACTATGGTAAACCTACGGAATCATCATGTATCGGTTAACGGGAATTGCCCGGTTTGCCAGGAGGAGATGGAGACTTCAGACCATGCCCTCTTTCAGTGTACGAGGGCTCGTGAGGTATGGGACCTTCTTTATCCACCAATGATGAGGAATTTATGGGTTCATATGGATATTAAAGACTACTGGTTGAGTTTGGCTGACAATCCAATGGAGGTCTTAGAGCGTATTTGTGTGGGGACCTGGTCAATTTGGAACGACAGGAATAACTCGTTACATCAGTGTCAAATCCCTAATCCAAAGCTTAGATGTGAATGGATTAATGACTATCTGTCTGAGTTCTTGAAGGCCAACCCGAAAGGCGGTGCCTTTGTTCAAACGGAGAAAGATATTGTTAATCTCATTTCAGATGTTTTGCGTGATAAACAGGGGCATCTCAAGCTGGTGAGAAATCTATCTTCTCAGGCTGGTAACTCTTCGTTGGAAGCGGAAGCAATAGCGGTGCTTGAAGGGATGCGTCTGGCTAGATCTTTGAATGTGCAACAATTCACTGTGTTGTCTGATTCTTTGACTTTGATAAATTTGATCAATGAGAAGATTCAGGGGGAGGCCTATGTTGCTGCGACTCTCTAG
Protein sequence
MMKCQEASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPVCQEEMETSDHALFQCTRAREVWDLLYPPMMRNLWVHMDIKDYWLSLADNPMEVLERICVGTWSIWNDRNNSLHQCQIPNPKLRCEWINDYLSEFLKANPKGGAFVQTEKDIVNLISDVLRDKQGHLKLVRNLSSQAGNSSLEAEAIAVLEGMRLARSLNVQQFTVLSDSLTLINLINEKIQGEAYVAATL
Homology
BLAST of Lag0041335 vs. NCBI nr
Match:
XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])
HSP 1 Score: 123.6 bits (309), Expect = 2.4e-24
Identity = 76/268 (28.36%), Postives = 117/268 (43.66%), Query Frame = 0
Query: 2 MKCQEASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCP 61
+KC S S T WN +WK+ VP+K+KIF W++ H IPT NL + C
Sbjct: 1116 LKCNATSAS-TNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACT 1175
Query: 62 VCQEEMETSDHALFQCTRAREVWDLLYPPM-MRNLWVHMDIKDYWLSLADN-PMEVLERI 121
+C + E+ HA F C RAR++W L+P + + ++ + W SL + + L
Sbjct: 1176 ICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLA 1235
Query: 122 CVGTWSIWNDRNNSLHQCQIPNPKLRCEWINDYLSEFLKA-------------------- 181
+ W IWNDRN+ +H Q+ + +CEW+ +L +A
Sbjct: 1236 AITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYW 1295
Query: 182 NPKGGAFVQTEKDIV-----NLISDVLRDKQGHLKLVRNLSSQAGNSSLEAEAIAVLEGM 241
P ++ D ++RD L ++ S L AE +LEG+
Sbjct: 1296 RPSSSVSLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGL 1355
Query: 242 RLARSLNVQQFTVLSDSLTLINLINEKI 243
+ A + N V SDSL I LI +I
Sbjct: 1356 KFAAASNFTHLEVESDSLLAIQLIRNEI 1382
BLAST of Lag0041335 vs. NCBI nr
Match:
XP_030479077.1 (uncharacterized protein LOC115696311 [Cannabis sativa])
HSP 1 Score: 118.2 bits (295), Expect = 1.0e-22
Identity = 82/282 (29.08%), Postives = 133/282 (47.16%), Query Frame = 0
Query: 3 KCQEASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPV 62
K E+S S++ WWNR+W +++P KVKIF W+ +++++PT VNL + +SV +C +
Sbjct: 829 KINESSTSDLNH--GWWNRLWALKLPKKVKIFAWRVINDALPTQVNLMHRKISVVASCSL 888
Query: 63 CQEEMETSDHALFQCTRAREVWDLLYPPMMRNLWVHMDIKDYWLSLAD-NPMEVLERICV 122
C E+S HALF CTRA++VW L + L M+ + + S+A +VL +I
Sbjct: 889 CNCPRESSGHALFFCTRAQQVWSLAHVFSPNPLISRMNGFEIFSSIATVKQNDVLAKILC 948
Query: 123 GTWSIWNDRNNSLHQCQIPNPKLRCEWINDYLSEFLKAN--------------------P 182
W IW +RN +H + + C +++ Y+ +FL A+ P
Sbjct: 949 LMWCIWTERNKEIHGSKPKPTGVICSFVDMYVQQFLLAHAKQVSMDSSCNNFDNAPATAP 1008
Query: 183 KGG--------AFVQTEKDIVNL------------ISDVLRDKQGHLKLVRNLSSQAGNS 242
+G A T +N+ I DV+RD G + + S
Sbjct: 1009 QGSHPQASSVWALPPTGSYKLNIDVAFNDEGSVIGIGDVVRDYFGDVVGALSKPLIGRCS 1068
Query: 243 SLEAEAIAVLEGMRLARSLNVQQFTVLSDSLTLINLINEKIQ 244
E EA A+L ++ A L +Q + ++SL N IN+ Q
Sbjct: 1069 VREMEATALLHSLQWALQLGLQMDYIETNSLIFANAINKHSQ 1108
BLAST of Lag0041335 vs. NCBI nr
Match:
XP_030943029.1 (uncharacterized protein LOC115967981 [Quercus lobata])
HSP 1 Score: 116.3 bits (290), Expect = 3.8e-22
Identity = 77/266 (28.95%), Postives = 115/266 (43.23%), Query Frame = 0
Query: 5 QEASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPVCQ 64
+E ++ T W R+W+ +VP K+KIF W+T N +PTM NL + V + CP+C
Sbjct: 33 EEGESTSSSSRTLLWKRIWQQKVPLKIKIFAWRTCVNGLPTMQNLNHRGVHCSSFCPLCD 92
Query: 65 EEMETSDHALFQCTRAREVWDLLYPPMMRNLWVHMDIKDYWLS-LADNPMEVLERICVGT 124
+ +ET+ HAL C A+ W Y + + D D L +A LE T
Sbjct: 93 KAIETTAHALLHCDHAKMTWAFWYNCPVDLSTSYCDCVDIALDFIAKGSPNDLELFFAIT 152
Query: 125 WSIWNDRNNSLHQCQIPNPKLRCEWINDYLSE-------------------------FLK 184
WSIW +RN ++H+ P E L+E F+K
Sbjct: 153 WSIWWNRNQAIHEDSGSPPIHAWEMAGGVLAEYKAACSCPRLSQSIPQSKWKAPPMGFIK 212
Query: 185 ANPKGGAFVQTEKDIVNLISDVLRDKQGHLKLVRNLSSQAGNSSLEAEAIAVLEGMRLAR 244
N AF K + + V+RD G + N S +EA+A+ +G+ LA
Sbjct: 213 INTDAAAFEDGRKSCIGV---VIRDNMGEVLAASNKVLPTSYSVEISEALAMQDGVLLAT 272
BLAST of Lag0041335 vs. NCBI nr
Match:
XP_030970300.1 (uncharacterized protein LOC115990627 [Quercus lobata])
HSP 1 Score: 113.2 bits (282), Expect = 3.2e-21
Identity = 70/241 (29.05%), Postives = 111/241 (46.06%), Query Frame = 0
Query: 5 QEASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPVCQ 64
++ ++ T W +W+ +VP K+KIF W+T N +PTM NL + V + CP+C
Sbjct: 71 EDGESTSSSSRTLLWKWIWQQKVPPKIKIFAWRTCVNGLPTMQNLNHRGVHCSSFCPLCD 130
Query: 65 EEMETSDHALFQCTRAREVWDLLYPPMMRNLWVHMDIKDYWLS-LADNPMEVLERICVGT 124
+ +ET+ HAL C A+ W Y + D+ D L +A LE
Sbjct: 131 KAIETTVHALLHCDHAKMTWAFWYNFPVDLSTSFCDLVDIALDFIAKGSSNDLELFFAVA 190
Query: 125 WSIWNDRNNSLHQCQIPNPKLRCEWINDYLSEFLKANPKGGAFVQTEKDIVNLISDVLRD 184
WSIW +RN ++H+ P E L+EF A AF + + V+RD
Sbjct: 191 WSIWWNRNQAIHEDSGSPPIHAREMAGGVLAEFKAAWEMAVAFEDGRNSCIGV---VIRD 250
Query: 185 KQGHLKLVRNLSSQAGNSSLEAEAIAVLEGMRLARSLNVQQFTVLSDSLTLINLINEKIQ 244
G + S+ +EA+A+ +G+ LA + V S++L++I IN+ I
Sbjct: 251 NIGEVLAASRKVLPVSFSTEISEALAMQDGVLLAAEMEVSHAIFESNALSIIQAINDGIH 308
BLAST of Lag0041335 vs. NCBI nr
Match:
XP_023901742.1 (uncharacterized protein LOC112013579 [Quercus suber])
HSP 1 Score: 112.8 bits (281), Expect = 4.2e-21
Identity = 79/252 (31.35%), Postives = 121/252 (48.02%), Query Frame = 0
Query: 19 WNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPVCQEEMETSDHALFQCT 78
W R+W+++VP K+KIF W+T N +PTM NL + V + CP+C + +ET HAL C
Sbjct: 893 WKRIWQLKVPPKIKIFAWRTCVNGLPTMQNLNHRGVHCSSFCPLCDKAIETITHALLHCE 952
Query: 79 RAREVWDLLYPPMMRNLWVHMDIKDYWLS-LADNPMEVLERICVGTWSIWNDRNNSLHQC 138
A+ W + +L D+ + L +A + LE WSIW +RN ++H+
Sbjct: 953 HAKLTW-AFWCNSPVDLSTSCDMVEIALDIIAKGSLHDLELFFAVAWSIWWNRNQAIHED 1012
Query: 139 QIPNPKLRCEWINDYLSEF-----------------LKANPKGGAFVQT-----EKDIVN 198
P E L+EF KA P G + T + + +
Sbjct: 1013 SGSPPIQAWELAGGVLAEFKAACLCPALSQALPLSRWKAPPSGYFKINTDAAAFDDERCS 1072
Query: 199 LISDVLRDKQGHLKLVRNLSSQAGNSSLEA---EAIAVLEGMRLARSLNVQQFTVLSDSL 245
I V+RD +G +V SS+ ++S A EA+A+ EG+ LA + V SDSL
Sbjct: 1073 CIGVVIRDCRG---VVLAASSKVLSASFPAEISEALAMQEGVLLAAEMEVSHAIFESDSL 1132
BLAST of Lag0041335 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05
Identity = 22/73 (30.14%), Postives = 38/73 (52.05%), Query Frame = 0
Query: 17 TWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPVCQEEMETSDHALFQ 76
+++N +WK+RVP +VK F W + ++ T H+S + C VC+ +E+ H L
Sbjct: 286 SFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRD 345
Query: 77 CTRAREVWDLLYP 90
C +W + P
Sbjct: 346 CPAQLGIWVRVVP 358
BLAST of Lag0041335 vs. ExPASy TrEMBL
Match:
A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)
HSP 1 Score: 123.6 bits (309), Expect = 1.1e-24
Identity = 76/268 (28.36%), Postives = 117/268 (43.66%), Query Frame = 0
Query: 2 MKCQEASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCP 61
+KC S S T WN +WK+ VP+K+KIF W++ H IPT NL + C
Sbjct: 1116 LKCNATSAS-TNYRGTQWNSIWKLTVPTKIKIFIWRSAHEHIPTAQNLLLRGIGELPACT 1175
Query: 62 VCQEEMETSDHALFQCTRAREVWDLLYPPM-MRNLWVHMDIKDYWLSLADN-PMEVLERI 121
+C + E+ HA F C RAR++W L+P + + ++ + W SL + + L
Sbjct: 1176 ICGDRRESIIHAFFHCKRARQIWRTLFPFLTCLSAEDNISFLELWSSLTEQLEPKDLNLA 1235
Query: 122 CVGTWSIWNDRNNSLHQCQIPNPKLRCEWINDYLSEFLKA-------------------- 181
+ W IWNDRN+ +H Q+ + +CEW+ +L +A
Sbjct: 1236 AITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVVQYW 1295
Query: 182 NPKGGAFVQTEKDIV-----NLISDVLRDKQGHLKLVRNLSSQAGNSSLEAEAIAVLEGM 241
P ++ D ++RD L ++ S L AE +LEG+
Sbjct: 1296 RPSSSVSLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCILEGL 1355
Query: 242 RLARSLNVQQFTVLSDSLTLINLINEKI 243
+ A + N V SDSL I LI +I
Sbjct: 1356 KFAAASNFTHLEVESDSLLAIQLIRNEI 1382
BLAST of Lag0041335 vs. ExPASy TrEMBL
Match:
A0A803QG02 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 4.8e-23
Identity = 82/282 (29.08%), Postives = 133/282 (47.16%), Query Frame = 0
Query: 3 KCQEASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPV 62
K E+S S++ WWNR+W +++P KVKIF W+ +++++PT VNL + +SV +C +
Sbjct: 748 KINESSTSDLNH--GWWNRLWALKLPKKVKIFAWRVINDALPTQVNLMHRKISVVASCSL 807
Query: 63 CQEEMETSDHALFQCTRAREVWDLLYPPMMRNLWVHMDIKDYWLSLAD-NPMEVLERICV 122
C E+S HALF CTRA++VW L + L M+ + + S+A +VL +I
Sbjct: 808 CNCPRESSGHALFFCTRAQQVWSLAHVFSPNPLISRMNGFEIFSSIATVKQNDVLAKILC 867
Query: 123 GTWSIWNDRNNSLHQCQIPNPKLRCEWINDYLSEFLKAN--------------------P 182
W IW +RN +H + + C +++ Y+ +FL A+ P
Sbjct: 868 LMWCIWTERNKEIHGSKPKPTGVICSFVDMYVQQFLLAHAKQVSMDSSCNNFDNAPATAP 927
Query: 183 KGG--------AFVQTEKDIVNL------------ISDVLRDKQGHLKLVRNLSSQAGNS 242
+G A T +N+ I DV+RD G + + S
Sbjct: 928 QGSHPQASSVWALPPTGSYKLNIDVAFNDEGSVIGIGDVVRDYFGDVVGALSKPLIGRCS 987
Query: 243 SLEAEAIAVLEGMRLARSLNVQQFTVLSDSLTLINLINEKIQ 244
E EA A+L ++ A L +Q + ++SL N IN+ Q
Sbjct: 988 VREMEATALLHSLQWALQLGLQMDYIETNSLIFANAINKHSQ 1027
BLAST of Lag0041335 vs. ExPASy TrEMBL
Match:
A0A803PKZ1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 115.2 bits (287), Expect = 4.1e-22
Identity = 60/165 (36.36%), Postives = 95/165 (57.58%), Query Frame = 0
Query: 6 EASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPVCQE 65
E S S+ ++ WWNR+W +R+P K+KIF W+ ++ ++PT VNL + S + C +CQ
Sbjct: 434 EHSSSSTHRQ--WWNRMWSLRLPKKLKIFLWRFINEALPTAVNLVHRKFSSSNACSLCQC 493
Query: 66 EMETSDHALFQCTRAREVWD----LLYPPMMRNLWVHMDIKDYWLSLADNPMEVLERICV 125
+TS HA+F+C RA+ VW ++ P M N DI Y ++ A N E+ + +C+
Sbjct: 494 SWKTSGHAIFRCKRAKAVWQQFQYKIHMPNMGNA-KGFDIFSY-IAAAHNDFELEQIVCL 553
Query: 126 GTWSIWNDRNNSLHQCQIPNPKLRCEWINDYLSEFLKA-NPKGGA 166
WSIW++RN +H + + C + YL++F KA PK A
Sbjct: 554 -MWSIWSERNKEIHGTKPKPVAVLCSYSASYLAQFHKATTPKHAA 593
BLAST of Lag0041335 vs. ExPASy TrEMBL
Match:
A0A803NQ77 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 114.8 bits (286), Expect = 5.3e-22
Identity = 57/158 (36.08%), Postives = 92/158 (58.23%), Query Frame = 0
Query: 6 EASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPVCQE 65
E S S+ ++ WWNR+W +R+P K+KIF W+ ++ ++PT VNL + +S + C +CQ
Sbjct: 1119 EHSSSSTNRQ--WWNRMWSLRLPKKLKIFLWRFINEALPTAVNLAHRKISSSNACSLCQC 1178
Query: 66 EMETSDHALFQCTRAREVWD----LLYPPMMRNLWVHMDIKDYWLSLADNPMEVLERICV 125
TS HA+F+C RA+ VW +Y P M N + DI Y ++ A N +E+ + +C+
Sbjct: 1179 SWVTSGHAIFRCKRAKAVWQQFQYKIYMPNMGNAKGY-DIFSY-IAAAHNDLELEQIVCL 1238
Query: 126 GTWSIWNDRNNSLHQCQIPNPKLRCEWINDYLSEFLKA 160
W+IW++RN H + + C + YL +F KA
Sbjct: 1239 -MWNIWSERNKETHGSKPKPVDVLCSYSASYLDQFHKA 1271
BLAST of Lag0041335 vs. ExPASy TrEMBL
Match:
A0A803NL40 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 112.8 bits (281), Expect = 2.0e-21
Identity = 60/161 (37.27%), Postives = 88/161 (54.66%), Query Frame = 0
Query: 3 KCQEASLSNVEKETTWWNRVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPV 62
K ++S S+ ++ WWNR+W + +P KVKIF W+ ++N++PT NL+ +S C +
Sbjct: 761 KLNDSSPSDSNRQ--WWNRLWSLSLPKKVKIFVWRVINNALPTAPNLQYRKISPTTACSL 820
Query: 63 CQEEMETSDHALFQCTRAREVWDLL----YPPMMRNLWVHMDIKDYWLSLADNPMEVLER 122
C E+ HALF C+R R+VW P ++NL DI Y L+ N +E LE+
Sbjct: 821 CNYHWESVGHALFSCSRPRQVWSQAKFNHLPLNIKNLH-GPDIFSY-LTAGCNNVE-LEK 880
Query: 123 ICVGTWSIWNDRNNSLHQCQIPNPKLRCEWINDYLSEFLKA 160
I W IW +RN LHQ + K+ C + YL F KA
Sbjct: 881 ILCLVWCIWTERNKELHQTKPKQAKVICTFAETYLQRFYKA 916
BLAST of Lag0041335 vs. TAIR 10
Match:
AT2G02650.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 69.7 bits (169), Expect = 3.8e-12
Identity = 63/267 (23.60%), Postives = 103/267 (38.58%), Query Frame = 0
Query: 22 VWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPVCQEEMETSDHALFQCTRAR 81
+WK+ V K+K F W+ V ++ T LR+ ++ + C C E ET H +F C +
Sbjct: 37 IWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQ 96
Query: 82 EVWDLLYPPMMRNLWVHMDIKDYW---LSLADNPMEVLERICVGT-------------WS 141
VW ++ I + W S DN +++ T W
Sbjct: 97 SVWRS----------ANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIMWR 156
Query: 142 IWNDRNNSLHQ--CQIPNPKLR------CEWIN------------------DYLSEFLKA 201
+W RN L Q CQ P+ + R EW+N + +
Sbjct: 157 LWKSRNVFLFQQKCQSPDYEARKGIQDATEWLNANETTENTNVHVATNPIQTSRRDSSQW 216
Query: 202 NPKGGAFVQ-------TEKDIVNLISDVLRDKQGHLKLVRNLSSQAGNSSLEAEAIAVLE 240
NP +V+ T+ +R+ GH+ L N Q+ SL AEA+ L
Sbjct: 217 NPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCSLHAEALGFLH 276
BLAST of Lag0041335 vs. TAIR 10
Match:
AT3G25270.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 65.9 bits (159), Expect = 5.5e-11
Identity = 35/121 (28.93%), Postives = 57/121 (47.11%), Query Frame = 0
Query: 21 RVWKMRVPSKVKIFFWKTVHNSIPTMVNLRNHHVSVNGNCPVCQEEMETSDHALFQCTRA 80
++WK++ K+K F WK + ++ T NL+ H+ + C C +E ETS H F C A
Sbjct: 17 KIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYA 76
Query: 81 REVWDLLYPP--MMRNLWVHMDIKDYWL---SLADNPMEVLERICVGTWSIWNDRNNSLH 137
++VW P +R + M+ K L LA+ ++ W +W RN +
Sbjct: 77 QQVWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVF 136
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C2F6 | 2.0e-05 | 30.14 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DX30 | 1.1e-24 | 28.36 | uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... | [more] |
A0A803QG02 | 4.8e-23 | 29.08 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PKZ1 | 4.1e-22 | 36.36 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803NQ77 | 5.3e-22 | 36.08 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803NL40 | 2.0e-21 | 37.27 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT2G02650.1 | 3.8e-12 | 23.60 | Ribonuclease H-like superfamily protein | [more] |
AT3G25270.1 | 5.5e-11 | 28.93 | Ribonuclease H-like superfamily protein | [more] |