Lag0041278 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041278
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Reverse transcriptase domain-containing protein
Location	chr13: 14888997 .. 14889740 (-)
RNA-Seq Expression	Lag0041278
Synteny	Lag0041278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTTCTTTGAATGCGGCACGAGCATTCTGGTTCGGGTCGCAGCTGCAGCTTGATTCCATGAGTGTAAGAGGTCGGTCGTTCCTAGAAAGTTGGGAAAAAGTCATATGCCGGCTTTCAATAGGGGACCAGGCTGAAGAGAGGATAAGCTTCTTCGCCTTCGGGCTATGGAGGCTGTGGAAAGCACGAAACGGAAATACCTTTGCAGATAAACGAGTGGATGTTCAGCTGTGTATTCAAATGGCAGAGGCGGATGTCCGGGACTACAAAAAGGCCTGTGAGGAGAAAGGGCGAGCTGAGGTAGTGCAAGACGCATTGATGGCCCCTATTTTAGCTGATGATGCTGAAAAACCAGTGATATGGGTGGATGCTGCCTGGTGTAAAGACTCCCTTGCTACTAGCTATGGATGGGTTCTTTAGAATCCTGTCCTAAGAACCAATGTGGAAGGTGCACGGAAAGGGGGTAACAGCCTGAATAGCCTGCACTCAGAAGGTAAGGCCTTCAAATGGGGCCTGGAATGCGCATGGAATATGGGACTTAGAGAAATTTGGGCTAAGTCTGACTCTCTTAGTCTTGTTAATATTGTAAATGGGAAAGAGTGCTGCCCAGTGGACTTCGATCCAATCCGAGATGACATTCAGGTGTTGTATGGGAGGTTTAGCTTTTGTAATCTCTCATTTGTGAGGAGAGAACAGAATGGGATAGCACATTGCTTGGCCAAGTCTGTAATGTCTCCCTTCTGA

mRNA sequence

ATGTTTTCTTTGAATGCGGCACGAGCATTCTGGTTCGGGTCGCAGCTGCAGCTTGATTCCATGAGTGTAAGAGGTCGGTCGTTCCTAGAAAGTTGGGAAAAAGTCATATGCCGGCTTTCAATAGGGGACCAGGCTGAAGAGAGGATAAGCTTCTTCGCCTTCGGGCTATGGAGGCTGTGGAAAGCACGAAACGGAAATACCTTTGCAGATAAACGAGTGGATGTTCAGCTGTGTATTCAAATGGCAGAGGCGGATGTCCGGGACTACAAAAAGGCCTGTGAGGAGAAAGGGCGAGCTGAGGTAGTGCAAGACGCATTGATGGCCCCTATTTTAGCTGATGATGCTGAAAAACCAGTGATATGGGTGGATGCTGCCTGGTGTGCACGGAAAGGGGGTAACAGCCTGAATAGCCTGCACTCAGAAGGTAAGGCCTTCAAATGGGGCCTGGAATGCGCATGGAATATGGGACTTAGAGAAATTTGGGCTAAGTCTGACTCTCTTAGTCTTGTTAATATTGTAAATGGGAAAGAGTGCTGCCCAGTGGACTTCGATCCAATCCGAGATGACATTCAGGTGTTGTATGGGAGGTTTAGCTTTTGTAATCTCTCATTTGTGAGGAGAGAACAGAATGGGATAGCACATTGCTTGGCCAAGTCTGTAATGTCTCCCTTCTGA

Coding sequence (CDS)

ATGTTTTCTTTGAATGCGGCACGAGCATTCTGGTTCGGGTCGCAGCTGCAGCTTGATTCCATGAGTGTAAGAGGTCGGTCGTTCCTAGAAAGTTGGGAAAAAGTCATATGCCGGCTTTCAATAGGGGACCAGGCTGAAGAGAGGATAAGCTTCTTCGCCTTCGGGCTATGGAGGCTGTGGAAAGCACGAAACGGAAATACCTTTGCAGATAAACGAGTGGATGTTCAGCTGTGTATTCAAATGGCAGAGGCGGATGTCCGGGACTACAAAAAGGCCTGTGAGGAGAAAGGGCGAGCTGAGGTAGTGCAAGACGCATTGATGGCCCCTATTTTAGCTGATGATGCTGAAAAACCAGTGATATGGGTGGATGCTGCCTGGTGTGCACGGAAAGGGGGTAACAGCCTGAATAGCCTGCACTCAGAAGGTAAGGCCTTCAAATGGGGCCTGGAATGCGCATGGAATATGGGACTTAGAGAAATTTGGGCTAAGTCTGACTCTCTTAGTCTTGTTAATATTGTAAATGGGAAAGAGTGCTGCCCAGTGGACTTCGATCCAATCCGAGATGACATTCAGGTGTTGTATGGGAGGTTTAGCTTTTGTAATCTCTCATTTGTGAGGAGAGAACAGAATGGGATAGCACATTGCTTGGCCAAGTCTGTAATGTCTCCCTTCTGA

Protein sequence

MFSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWKARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIWVDAAWCARKGGNSLNSLHSEGKAFKWGLECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVRREQNGIAHCLAKSVMSPF

Homology

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BLAST of Lag0041278 vs. NCBI nr
Match: XP_008386432.2 (uncharacterized protein LOC103448950 [Malus domestica])

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-17
Identity = 66/251 (26.29%), Postives = 112/251 (44.62%), Query Frame = 0


Query: 2   FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
           F  + +   WF S L L+S+ + G  FL+SW      +   + AE  +  FAFGLWR+WK
Sbjct: 22  FKCDLSHRLWFCSPLHLNSIELIGADFLDSWNIFCTSIKDREDAEAIMQEFAFGLWRIWK 81

Query: 62  ARNGNTFADKRVDVQLCIQMAEADVRDYKKACE----EKGRAEVVQDALMAPILADDAEK 121
            RN   F          + +   ++ +Y++A      ++G    ++   M P+L    EK
Sbjct: 82  NRNDVVFKGSHCQPNEILTVWRKNIGEYREAMNHGSLDEGAVRPLKSPPMMPVL---WEK 141

Query: 122 P-----VIWVDAAWCARK-------------------GGNSLNSLH----SEGKAFKWGL 181
           P      +  DA+WC+                     GG+  ++ H    +E  A + GL
Sbjct: 142 PQFGTFKLNTDASWCSASFRAGAGWVIRDFAGILHAAGGSGTSTFHCAAAAEAHAIRTGL 201

Query: 182 ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVRREQ 221
           +     G   ++ ++D+ +++ ++N        F+ I  DI+VL  R +     FV RE+
Sbjct: 202 QYCTEYGFENVFVEADAKTVILMINKGTAPNCSFECILGDIEVLARRLTSLTFGFVPRER 261

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BLAST of Lag0041278 vs. NCBI nr
Match: CAB4274760.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 100.1 bits (248), Expect = 2.5e-17
Identity = 71/251 (28.29%), Postives = 110/251 (43.82%), Query Frame = 0


Query: 2    FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
            F  + ARAFWF S LQLD   + G  F+ +W+ ++  L+  + A E I +F FGLWR+WK
Sbjct: 1014 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 1073

Query: 62   ARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIW 121
            ARN   F   + D    + +    V +++ A  +      +QD    P+    +  P+ W
Sbjct: 1074 ARNLAVFDGVQADPTEVVLLLLKQVSEFRTAKHD------LQDLQPQPLQPASSPAPLSW 1133

Query: 122  -----------VDAAWCARKGGNSL-----------------------NSLHSEGKAFKW 181
                        DAAW A++ G  +                       +++  E  A + 
Sbjct: 1134 CKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRH 1193

Query: 182  GL-ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVR 218
             L ECA N  L +I  +SDS   + ++NG+     D + I  DI+ L    S  +  F  
Sbjct: 1194 ALSECA-NFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 1253

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BLAST of Lag0041278 vs. NCBI nr
Match: CAB4274761.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 100.1 bits (248), Expect = 2.5e-17
Identity = 71/251 (28.29%), Postives = 110/251 (43.82%), Query Frame = 0


Query: 2   FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
           F  + ARAFWF S LQLD   + G  F+ +W+ ++  L+  + A E I +F FGLWR+WK
Sbjct: 146 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 205

Query: 62  ARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIW 121
           ARN   F   + D    + +    V +++ A  +      +QD    P+    +  P+ W
Sbjct: 206 ARNLAVFDGVQADPTEVVLLLLKQVSEFRTAKHD------LQDLQPQPLQPASSPAPLSW 265

Query: 122 -----------VDAAWCARKGGNSL-----------------------NSLHSEGKAFKW 181
                       DAAW A++ G  +                       +++  E  A + 
Sbjct: 266 CKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRH 325

Query: 182 GL-ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVR 218
            L ECA N  L +I  +SDS   + ++NG+     D + I  DI+ L    S  +  F  
Sbjct: 326 ALSECA-NFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 385

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BLAST of Lag0041278 vs. NCBI nr
Match: CAB4303756.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 98.6 bits (244), Expect = 7.3e-17
Identity = 71/251 (28.29%), Postives = 108/251 (43.03%), Query Frame = 0


Query: 2   FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
           F  + ARAFWF S LQLD   + G  F+ +W+ ++  L+  + A E I +F FGLWR+WK
Sbjct: 686 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 745

Query: 62  ARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIW 121
           ARN   F   + D    + +    V +++ A          QD    P+    +  P+ W
Sbjct: 746 ARNLAVFDGVQADPTEAVLLLLKQVSEFRTA---------KQDLQPQPLQPVSSPAPLSW 805

Query: 122 -----------VDAAWCARKGGNSL-----------------------NSLHSEGKAFKW 181
                       DAAW A++ G  +                       +++  E  A + 
Sbjct: 806 CKPPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRH 865

Query: 182 GL-ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVR 218
            L ECA N  L +I  +SDS   + ++NG+     D + I  DI+ L    S  +  F  
Sbjct: 866 ALSECA-NFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 925

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BLAST of Lag0041278 vs. NCBI nr
Match: CAB4321714.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-16
Identity = 71/248 (28.63%), Postives = 106/248 (42.74%), Query Frame = 0


Query: 2   FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
           F  + ARAFWF S LQLD   + G  F+ +W+ ++  L+  + A E I +F FGLWR+WK
Sbjct: 241 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 300

Query: 62  ARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIW 121
           ARN   F   + D    + +    V +++ A          QD    P+    +  P+ W
Sbjct: 301 ARNLAVFDGVQADPTEAVLLLLKQVSEFRTA---------KQDLQPQPLQPVSSPAPLSW 360

Query: 122 -----------VDAAWCARKGGNSL-----------------------NSLHSEGKAFKW 181
                       DAAW A++ G  +                       ++L  E  A + 
Sbjct: 361 CKPPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFSLLLCAGGQGDLHGSSALMMELLAIRH 420

Query: 182 GL-ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVR 215
            L ECA N  L +I  +SDS   + ++NG+     D + I  DI+ L    S  +  F  
Sbjct: 421 ALSECA-NFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSQVSFVFAP 478

[Close]

BLAST of Lag0041278 vs. ExPASy TrEMBL
Match: A0A6J5UE59 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23353 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-17
Identity = 71/251 (28.29%), Postives = 110/251 (43.82%), Query Frame = 0


Query: 2    FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
            F  + ARAFWF S LQLD   + G  F+ +W+ ++  L+  + A E I +F FGLWR+WK
Sbjct: 1014 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 1073

Query: 62   ARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIW 121
            ARN   F   + D    + +    V +++ A  +      +QD    P+    +  P+ W
Sbjct: 1074 ARNLAVFDGVQADPTEVVLLLLKQVSEFRTAKHD------LQDLQPQPLQPASSPAPLSW 1133

Query: 122  -----------VDAAWCARKGGNSL-----------------------NSLHSEGKAFKW 181
                        DAAW A++ G  +                       +++  E  A + 
Sbjct: 1134 CKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRH 1193

Query: 182  GL-ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVR 218
             L ECA N  L +I  +SDS   + ++NG+     D + I  DI+ L    S  +  F  
Sbjct: 1194 ALSECA-NFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 1253

[Close]

BLAST of Lag0041278 vs. ExPASy TrEMBL
Match: A0A6J5UF50 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23354 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.2e-17
Identity = 71/251 (28.29%), Postives = 110/251 (43.82%), Query Frame = 0


Query: 2   FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
           F  + ARAFWF S LQLD   + G  F+ +W+ ++  L+  + A E I +F FGLWR+WK
Sbjct: 146 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 205

Query: 62  ARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIW 121
           ARN   F   + D    + +    V +++ A  +      +QD    P+    +  P+ W
Sbjct: 206 ARNLAVFDGVQADPTEVVLLLLKQVSEFRTAKHD------LQDLQPQPLQPASSPAPLSW 265

Query: 122 -----------VDAAWCARKGGNSL-----------------------NSLHSEGKAFKW 181
                       DAAW A++ G  +                       +++  E  A + 
Sbjct: 266 CKPSLGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRH 325

Query: 182 GL-ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVR 218
            L ECA N  L +I  +SDS   + ++NG+     D + I  DI+ L    S  +  F  
Sbjct: 326 ALSECA-NFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 385

[Close]

BLAST of Lag0041278 vs. ExPASy TrEMBL
Match: A0A6J5WPU6 (Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS20372 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.5e-17
Identity = 71/251 (28.29%), Postives = 108/251 (43.03%), Query Frame = 0


Query: 2   FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
           F  + ARAFWF S LQLD   + G  F+ +W+ ++  L+  + A E I +F FGLWR+WK
Sbjct: 686 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 745

Query: 62  ARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIW 121
           ARN   F   + D    + +    V +++ A          QD    P+    +  P+ W
Sbjct: 746 ARNLAVFDGVQADPTEAVLLLLKQVSEFRTA---------KQDLQPQPLQPVSSPAPLSW 805

Query: 122 -----------VDAAWCARKGGNSL-----------------------NSLHSEGKAFKW 181
                       DAAW A++ G  +                       +++  E  A + 
Sbjct: 806 CKPPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSAIMMELLAIRH 865

Query: 182 GL-ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVR 218
            L ECA N  L +I  +SDS   + ++NG+     D + I  DI+ L    S  +  F  
Sbjct: 866 ALSECA-NFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 925

[Close]

BLAST of Lag0041278 vs. ExPASy TrEMBL
Match: A0A6J5YDN0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS50956 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.0e-17
Identity = 71/248 (28.63%), Postives = 106/248 (42.74%), Query Frame = 0


Query: 2   FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
           F  + ARAFWF S LQLD   + G  F+ +W+ ++  L+  + A E I +F FGLWR+WK
Sbjct: 241 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 300

Query: 62  ARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIW 121
           ARN   F   + D    + +    V +++ A          QD    P+    +  P+ W
Sbjct: 301 ARNLAVFDGVQADPTEAVLLLLKQVSEFRTA---------KQDLQPQPLQPVSSPAPLSW 360

Query: 122 -----------VDAAWCARKGGNSL-----------------------NSLHSEGKAFKW 181
                       DAAW A++ G  +                       ++L  E  A + 
Sbjct: 361 CKPPPGLLKVNCDAAWSAQRMGGGVGWVIRDSFSLLLCAGGQGDLHGSSALMMELLAIRH 420

Query: 182 GL-ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVR 215
            L ECA N  L +I  +SDS   + ++NG+     D + I  DI+ L    S  +  F  
Sbjct: 421 ALSECA-NFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSQVSFVFAP 478

[Close]

BLAST of Lag0041278 vs. ExPASy TrEMBL
Match: A0A6J5VSP2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.0e-16
Identity = 70/251 (27.89%), Postives = 106/251 (42.23%), Query Frame = 0


Query: 2   FSLNAARAFWFGSQLQLDSMSVRGRSFLESWEKVICRLSIGDQAEERISFFAFGLWRLWK 61
           F  + ARAFWF S LQLD   + G  F+ +W+ ++  L+  + A E I +F FGLWR+WK
Sbjct: 179 FECDFARAFWFASPLQLDVSKLAGEDFISTWQHMMTTLNSSEHAAEAIQWFVFGLWRIWK 238

Query: 62  ARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGRAEVVQDALMAPILADDAEKPVIW 121
           ARN   F   + D    + +    V +++ A          QD    P+    +  P+ W
Sbjct: 239 ARNLAVFDGVQADPTEAVLLLLKQVSEFRTA---------KQDLQPQPLQPVSSPAPLSW 298

Query: 122 V-----------DAAWCARKGGNSL-----------------------NSLHSEGKAFKW 181
                       DAAW A++ G  +                       ++L  E  A + 
Sbjct: 299 CKPPPGLLKVNSDAAWSAQRMGGGVGWVIRDSFGLLLCAGGQGDLHGSSALMMELLAIRH 358

Query: 182 GL-ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSFCNLSFVR 218
            L ECA N  L +I  +SDS   + ++NG+     D + I  DI+ L    S  +  F  
Sbjct: 359 ALSECA-NFHLTDIIVESDSQKGILMLNGRATVDSDLEGIVFDIRQLVASLSRVSFVFAP 418

[Close]

BLAST of Lag0041278 vs. TAIR 10
Match: AT2G02650.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 33/88 (37.50%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 133 NSLNSLHSEGKAFKWGLECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQV 192
           +S  SLH+E   F   L+  W  GLR +W +SDS SLV ++N  E   +    +  DI+ 
Sbjct: 252 SSTCSLHAEALGFLHALQVIWAHGLRYVWFESDSKSLVTLINNGEDHSL-LGTLIYDIRH 311

Query: 193 LYGRFSFCNLSFVRREQNGIAHCLAKSV 221
              +  +C+L FV RE+N  A  LA  V
Sbjct: 312 WMLKLPYCSLEFVNRERNSAADALASHV 338

[Close]

BLAST of Lag0041278 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 46/193 (23.83%), Postives = 77/193 (39.90%), Query Frame = 0


Query: 56  LWRLWKARNGNTFADKRVDVQLCIQMAEADVRDYKKACEEKGR----------------- 115
           +WR+WKARN   F   R      +  A+A+  D+  A +   +                 
Sbjct: 269 IWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRN 328

Query: 116 --AEVVQDALMAPILADDAEKPVIWV-------DAAWCARKGGNSLNSLHSEGKAFKWGL 175
             A  V+    A       E    W+         +W + K  ++ N L +E KA    L
Sbjct: 329 PPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAAL 388

Query: 176 ECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPI----RDDIQVLYGRFSFCNLSFV 219
           +  W  G  +++ + D  +L+N++NG     + F        +DI     +F+     F+
Sbjct: 389 QQTWIRGYTQVFMEGDCQTLINLING-----ISFHSSLANHLEDISFWANKFASIQFGFI 448

[Close]

BLAST of Lag0041278 vs. TAIR 10
Match: AT4G03292.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07
Identity = 27/80 (33.75%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 134 SLNSLHSEGKAFKWGLECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVL 193
           S +SLH+E   F   L+  W  GLR +W ++D+  LV ++N  E   +   P+  DI+  
Sbjct: 83  STSSLHAEVLGFLHALQVIWIHGLRYVWFETDNRDLVTLLNNDEDHRL-LGPLLCDIRYW 142

Query: 194 YGRFSFCNLSFVRREQNGIA 214
             +  +C++ FV RE+N  A
Sbjct: 143 MLKLPYCSIDFVNRERNSAA 161

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BLAST of Lag0041278 vs. TAIR 10
Match: AT2G13980.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 4.7e-06
Identity = 30/93 (32.26%), Postives = 45/93 (48.39%), Query Frame = 0


Query: 126 WCARKGGNSLNSLHSEGKAFKWGLECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDP 185
           W + +  N+   L +E KA    L+  W  G   +  + D  +L N+V+G          
Sbjct: 52  WGSLQLDNTSTPLEAETKALLAALQQTWIRGYLRVIMEGDCETLTNLVSGSS-SHNHLAN 111

Query: 186 IRDDIQVLYGRFSFCNLSFVRREQNGIAHCLAK 219
           + DDI++   +FS    SFVRR  N +AH LAK
Sbjct: 112 LLDDIRIWAKKFSNVQFSFVRRGGNKVAHELAK 143

[Close]

BLAST of Lag0041278 vs. TAIR 10
Match: AT3G23320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.2e-04
Identity = 23/83 (27.71%), Postives = 41/83 (49.40%), Query Frame = 0


Query: 140 SEGKAFKWGLECAWNMGLREIWAKSDSLSLVNIVNGKECCPVDFDPIRDDIQVLYGRFSF 199
           +E  A  W ++CAW++G R +  + D++++  ++  KE  P       + IQ     F+ 
Sbjct: 83  AECTALIWAIQCAWDLGYRRVEFEGDNITVNRLIRNKETNP-RLRYYLEFIQQWSKAFTT 142

Query: 200 CNLSFVRREQNGIAHCLAKSVMS 223
              +F  REQN     LAK  ++
Sbjct: 143 VKFTFRHREQNVCVDVLAKKAVA 164

The following BLAST results are available for this feature:

BLAST of Lag0041278 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008386432.2	1.5e-17	26.29	uncharacterized protein LOC103448950 [Malus domestica]	[more]
CAB4274760.1	2.5e-17	28.29	unnamed protein product [Prunus armeniaca]	[more]
CAB4274761.1	2.5e-17	28.29	unnamed protein product [Prunus armeniaca]	[more]
CAB4303756.1	7.3e-17	28.29	unnamed protein product [Prunus armeniaca]	[more]
CAB4321714.1	1.2e-16	28.63	unnamed protein product [Prunus armeniaca]	[more]

BLAST of Lag0041278 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0041278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J5UE59	1.2e-17	28.29	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5UF50	1.2e-17	28.29	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23354 PE=4 S...	[more]
A0A6J5WPU6	3.5e-17	28.29	Reverse transcriptase domain-containing protein OS=Prunus armeniaca OX=36596 GN=...	[more]
A0A6J5YDN0	6.0e-17	28.63	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS50956 PE=...	[more]
A0A6J5VSP2	3.0e-16	27.89	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS51717 PE=4 S...	[more]

BLAST of Lag0041278 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02650.1	2.0e-09	37.50	Ribonuclease H-like superfamily protein	[more]
AT3G09510.1	2.0e-09	23.83	Ribonuclease H-like superfamily protein	[more]
AT4G03292.1	1.1e-07	33.75	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G13980.1	4.7e-06	32.26	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT3G23320.1	1.2e-04	27.71	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 105..223 e-value: 1.9E-8 score: 36.3
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 127..219 e-value: 5.3E-19 score: 68.2
IPR044730	Ribonuclease H-like domain, plant type	CDD	cd06222	RNase_H_like	coord: 136..218 e-value: 3.3755E-13 score: 61.9464
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 119..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0041278.1	Lag0041278.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity