Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGAAGAATCAAGAAACAGAGGCTGATGAAGTTCGCGGCGAACAGGCTGCAGTTGTGCCTGAAAAAAGAATACACAAGAACCGTGCAGGAAGCTCAGGTGGAGGTAAGCATGCCCGAACCACCAAAACGTCGCCGCATTAAGCGAAAGGCCGGCTGTATTCAGGTGATTCGAACTGATACCCCATCACCACCATCATCAGATTCTGAGAGAGAAAAG GGCAGAGAAGGGAAAAATGTTGCTGAAGCATCGGAGGAACACGATGCAATAGAAGAACAGCAGTTACCATTTGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGGGATTTCTTATTTGAGCGAGGATTCAGAGGTGATCTCCCACAATTTCTGAGGACAG CGCCATCTAATGCGCAGTTAAGTGATGTTGTAAGGGAGGTAGGTATTGAAGGAGCACAGTGGCAACTGTCCAAGACTCAGAAGAGGACATTCCAGGCGGCTTACTTGAAAAGGGAAGCAAACACGTGGATGAGATTTATAAGACAGAGAATGCTTCCAACAACACACGACTCGACAATCTCTAGGAACGAATTCTAA
ATGTTGAGAAGAATCAAGAAACAGAGGCTGATGAAGTTCGCGGCGAACAGGCTGCAGTTGTGCCTGAAAAAAGAATACACAAGAACCGTGCAGGAAGCTCAGGTGGAGGTAAGCATGCCCGAACCACCAAAACGTCGCCGCATTAAGCGAAAGGCCGGCTGTATTCAGGTGATTCGAACTGATACCCCATCACCACCATCATCAGATTCTGAGAGAGAAAAGGGCAGAGAAGGGAAAAATGTTGCTGAAGCATCGGAGGAACACGATGCAATAGAAGAACAGCAGTTACCATTTGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGGGATTTCTTATTTGAGCGAGGATTCAGAGGTGATCTCCCACAATTTCTGAGGACAGCGCCATCTAATGCGCAGTTAAGTGATGTTGTAAGGGAGGTAGGTATTGAAGGAGCACAGTGGCAACTGTCCAAGACTCAGAAGAGGACATTCCAGGCGGCTTACTTGAAAAGGGAAGCAAACACGTGGATGAGATTTATAAGACAGAGAATGCTTCCAACAACACACGACTCGACAATCTCTAGGAACGAATTCTAA
ATGTTGAGAAGAATCAAGAAACAGAGGCTGATGAAGTTCGCGGCGAACAGGCTGCAGTTGTGCCTGAAAAAAGAATACACAAGAACCGTGCAGGAAGCTCAGGTGGAGGTAAGCATGCCCGAACCACCAAAACGTCGCCGCATTAAGCGAAAGGCCGGCTGTATTCAGGTGATTCGAACTGATACCCCATCACCACCATCATCAGATTCTGAGAGAGAAAAGGGCAGAGAAGGGAAAAATGTTGCTGAAGCATCGGAGGAACACGATGCAATAGAAGAACAGCAGTTACCATTTGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATACGCTGAGCTTCTGAAAAGGGATTTCTTATTTGAGCGAGGATTCAGAGGTGATCTCCCACAATTTCTGAGGACAGCGCCATCTAATGCGCAGTTAAGTGATGTTGTAAGGGAGGTAGGTATTGAAGGAGCACAGTGGCAACTGTCCAAGACTCAGAAGAGGACATTCCAGGCGGCTTACTTGAAAAGGGAAGCAAACACGTGGATGAGATTTATAAGACAGAGAATGCTTCCAACAACACACGACTCGACAATCTCTAGGAACGAATTCTAA
MLRRIKKQRLMKFAANRLQLCLKKEYTRTVQEAQVEVSMPEPPKRRRIKRKAGCIQVIRTDTPSPPSSDSEREKGREGKNVAEASEEHDAIEEQQLPFDRFVNNFARAKYAELLKRDFLFERGFRGDLPQFLRTAPSNAQLSDVVREVGIEGAQWQLSKTQKRTFQAAYLKREANTWMRFIRQRMLPTTHDSTISRNEF
Homology
BLAST of Lag0041265 vs. NCBI nr
Match:
XP_024971944.1 (uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus])
HSP 1 Score: 55.8 bits (133), Expect = 4.8e-04
Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_024971944.1 4.8e-04 44.62 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus] [more]
Match Name E-value Identity Description
Match Name E-value Identity Description
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G T T G A G A A G A A T C A A G A A A C A G A G G C T G A T G A A G T T C G C G G C G A A C A G G C T G C A G T T G T G C C T G A A A A A A G A A T A C A C A A G A A C C G T G C A G G A A G C T C A G G T G G A G G T A A G C A T G C C C G A A C C A C C A A A A C G T C G C C G C A T T A A G C G A A A G G C C G G C T G T A T T C A G G T G A T T C G A A C T G A T A C C C C A T C A C C A C C A T C A T C A G A T T C T G A G A G A G A A A A G G G C A G A G A A G G G A A A A A T G T T G C T G A A G C A T C G G A G G A A C A C G A T G C A A T A G A A G A A C A G C A G T T A C C A T T T G A T C G C T T C G T C A A C A A T T T T G C C A G A G C A A A A T A C G C T G A G C T T C T G A A A A G G G A T T T C T T A T T T G A G C G A G G A T T C A G A G G T G A T C T C C C A C A A T T T C T G A G G A C A G C G C C A T C T A A T G C G C A G T T A A G T G A T G T T G T A A G G G A G G T A G G T A T T G A A G G A G C A C A G T G G C A A C T G T C C A A G A C T C A G A A G A G G A C A T T C C A G G C G G C T T A C T T G A A A A G G G A A G C A A A C A C G T G G A T G A G A T T T A T A A G A C A G A G A A T G C T T C C A A C A A C A C A C G A C T C G A C A A T C T C T A G G A A C G A A T T C T A A 50 100 150 200 250 300 350 400 450 500 550 600 Score = Score = Sequence mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 38..89 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 66..89
Relationships
The following mRNA feature(s) are a part of this gene:
