Lag0041252 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0041252
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	MLP-like protein 43
Location	chr13: 14433148 .. 14433699 (+)
RNA-Seq Expression	Lag0041252
Synteny	Lag0041252

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGTCTGGCTATGGAAAATTGCAAGCTGATGTAGAAATCAATGCTCCACCTTCAAAATTTCATGAATTGCTCCCGAAGAGACCACACCATATTTCCAACGTTTCTGGAGACAAAGTACAAAGTTGTGAGTTAGATGATGGTGATTGGGGCAGAGTTGGTTCTATTATCTCTTGGAACTACTTTCATGGTTTGTTTTCATGACTTTTTTTTATCCTTTTTCTATTTGTAGTGCAAATTGTAGCATGCATATTGATTTATGAAGTGTTGATTGTAGATGGAAAGACTAGAGTGGGAAAAGATATCATTGAAGCGGTAGATGAGGAAAAGAATTTGATTAGTTTCAAAGTGATAGATGGAGATCTTCTAAAGGATTACAAAACCTTTCGATATACCATCCAAGCTATTCCAAAAGGTAAAGGAAGTGTGGTTCACTGGACTATGGAATATGAGAAACTTCATGAAAACATTCCTGATTCACATTCCTTGCTTGAGTTTTGTGTCGGTATTTCCAAAGACATTGATGCTCATCTTATGAAAGGGAATTAA

mRNA sequence

ATGGCAATGTCTGGCTATGGAAAATTGCAAGCTGATGTAGAAATCAATGCTCCACCTTCAAAATTTCATGAATTGCTCCCGAAGAGACCACACCATATTTCCAACGTTTCTGGAGACAAAGTACAAAGTTGTGAGTTAGATGATGGTGATTGGGGCAGAGTTGGTTCTATTATCTCTTGGAACTACTTTCATGATGGAAAGACTAGAGTGGGAAAAGATATCATTGAAGCGGTAGATGAGGAAAAGAATTTGATTAGTTTCAAAGTGATAGATGGAGATCTTCTAAAGGATTACAAAACCTTTCGATATACCATCCAAGCTATTCCAAAAGGTAAAGGAAGTGTGGTTCACTGGACTATGGAATATGAGAAACTTCATGAAAACATTCCTGATTCACATTCCTTGCTTGAGTTTTGTGTCGGTATTTCCAAAGACATTGATGCTCATCTTATGAAAGGGAATTAA

Coding sequence (CDS)

ATGGCAATGTCTGGCTATGGAAAATTGCAAGCTGATGTAGAAATCAATGCTCCACCTTCAAAATTTCATGAATTGCTCCCGAAGAGACCACACCATATTTCCAACGTTTCTGGAGACAAAGTACAAAGTTGTGAGTTAGATGATGGTGATTGGGGCAGAGTTGGTTCTATTATCTCTTGGAACTACTTTCATGATGGAAAGACTAGAGTGGGAAAAGATATCATTGAAGCGGTAGATGAGGAAAAGAATTTGATTAGTTTCAAAGTGATAGATGGAGATCTTCTAAAGGATTACAAAACCTTTCGATATACCATCCAAGCTATTCCAAAAGGTAAAGGAAGTGTGGTTCACTGGACTATGGAATATGAGAAACTTCATGAAAACATTCCTGATTCACATTCCTTGCTTGAGTTTTGTGTCGGTATTTCCAAAGACATTGATGCTCATCTTATGAAAGGGAATTAA

Protein sequence

MAMSGYGKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWNYFHDGKTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPKGKGSVVHWTMEYEKLHENIPDSHSLLEFCVGISKDIDAHLMKGN

Homology

[Close]

BLAST of Lag0041252 vs. NCBI nr
Match: XP_004140475.1 (MLP-like protein 31 [Cucumis sativus] >KAE8648135.1 hypothetical protein Csa_021530 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 2.4e-67
Identity = 120/152 (78.95%), Postives = 133/152 (87.50%), Query Frame = 0


Query: 3   MSGYGKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWNY 62
           MS   KL+ADVEI AP SKFHELL KR HH+S  SGDKVQSCEL +GDWG+VGSII WNY
Sbjct: 1   MSVLRKLEADVEIEAPASKFHELLHKRLHHVSKASGDKVQSCELHEGDWGKVGSIIYWNY 60

Query: 63  FHDGKTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPKGKGSVVHWTMEY 122
           FHDGK +VGKD+IEAVDEE NLISFKVIDGDLLKDYKTF YTIQA+PKGKGSV+HWTMEY
Sbjct: 61  FHDGKAKVGKDVIEAVDEENNLISFKVIDGDLLKDYKTFNYTIQAVPKGKGSVIHWTMEY 120

Query: 123 EKLHENIPDSHSLLEFCVGISKDIDAHLMKGN 155
           EKLHE + DSHS+L+FC+ ISKDID HL +GN
Sbjct: 121 EKLHEKVADSHSMLQFCLAISKDIDVHLQRGN 152

[Close]

BLAST of Lag0041252 vs. NCBI nr
Match: XP_038893088.1 (MLP-like protein 31 [Benincasa hispida])

HSP 1 Score: 265.4 bits (677), Expect = 3.1e-67
Identity = 122/152 (80.26%), Postives = 135/152 (88.82%), Query Frame = 0


Query: 3   MSGYGKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWNY 62
           MS +GKL+ADVEI A  SKFHEL+ KR HH+S  SGDKVQSCEL +GDWG VGSII WNY
Sbjct: 1   MSLHGKLEADVEIEASASKFHELINKRLHHVSKASGDKVQSCELYEGDWGEVGSIIYWNY 60

Query: 63  FHDGKTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPKGKGSVVHWTMEY 122
           FHDGK +VGKD+IEAVD  KN+IS KVI+GDLLKDYKTF+YTIQAIPKG+GSVVHWTMEY
Sbjct: 61  FHDGKAKVGKDVIEAVDLAKNMISLKVIEGDLLKDYKTFKYTIQAIPKGRGSVVHWTMEY 120

Query: 123 EKLHENIPDSHSLLEFCVGISKDIDAHLMKGN 155
           EKLHENIPDSHSLLEFC+GISKDI  HL+KGN
Sbjct: 121 EKLHENIPDSHSLLEFCLGISKDISDHLLKGN 152

[Close]

BLAST of Lag0041252 vs. NCBI nr
Match: XP_022155380.1 (LOW QUALITY PROTEIN: MLP-like protein 31 [Momordica charantia])

HSP 1 Score: 252.3 bits (643), Expect = 2.7e-63
Identity = 113/148 (76.35%), Postives = 130/148 (87.84%), Query Frame = 0


Query: 7   GKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWNYFHDG 66
           GKL+AD+ I +P SKFH+L+ +RPHHISN SGDKVQ CEL  GDWG VGSI+ WN+FHDG
Sbjct: 5   GKLEADIGIKSPASKFHQLIHRRPHHISNASGDKVQGCELHKGDWGXVGSIVCWNFFHDG 64

Query: 67  KTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPKGKGSVVHWTMEYEKLH 126
           K +VGKD+IEAVDEE N I+F+VI+GDLL+ YK+F+YTIQAIPK KG VVHWTMEYEKLH
Sbjct: 65  KAKVGKDMIEAVDEETNSITFRVIEGDLLEHYKSFKYTIQAIPKAKGCVVHWTMEYEKLH 124

Query: 127 ENIPDSHSLLEFCVGISKDIDAHLMKGN 155
           E+IPDS SLLE CVGISKDIDAHLMKGN
Sbjct: 125 EDIPDSCSLLELCVGISKDIDAHLMKGN 152

[Close]

BLAST of Lag0041252 vs. NCBI nr
Match: XP_038893047.1 (MLP-like protein 31 [Benincasa hispida])

HSP 1 Score: 243.4 bits (620), Expect = 1.3e-60
Identity = 111/152 (73.03%), Postives = 126/152 (82.89%), Query Frame = 0


Query: 3   MSGYGKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWNY 62
           MS   KL+ D+EI A  SKFHELL KR HH+   SGDKVQSCEL +GDWG+VGSI+ WNY
Sbjct: 1   MSLQRKLEGDIEIEASASKFHELLHKRLHHVPKASGDKVQSCELHEGDWGKVGSIVYWNY 60

Query: 63  FHDGKTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPKGKGSVVHWTMEY 122
           F DGK +VGK +IEA+DEEKNL+ FK I+GDLLK YK+F YTIQAIPKGKGSVVHWTMEY
Sbjct: 61  FLDGKAKVGKHVIEAIDEEKNLMKFKEIEGDLLKIYKSFNYTIQAIPKGKGSVVHWTMEY 120

Query: 123 EKLHENIPDSHSLLEFCVGISKDIDAHLMKGN 155
           EKLHENIPDSHSLLE C+ I+KDI  H+ KGN
Sbjct: 121 EKLHENIPDSHSLLELCLAIAKDISDHIQKGN 152

[Close]

BLAST of Lag0041252 vs. NCBI nr
Match: XP_022155376.1 (MLP-like protein 28 [Momordica charantia])

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 108/152 (71.05%), Postives = 130/152 (85.53%), Query Frame = 0


Query: 3   MSGYGKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWNY 62
           MS  GKL+ADVEI+A  SKFHE+  K+PHHISN S DK+Q C+L DGDWG+VGSII WNY
Sbjct: 163 MSLKGKLEADVEISASASKFHEMFHKKPHHISNASVDKIQDCQLHDGDWGKVGSIICWNY 222

Query: 63  FHDGKTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPKGKGSVVHWTMEY 122
           FH GK  V K +IEAVDEEKNLI+FK+I+GD++  YK F++T+QA PKGKGSVVHWT+EY
Sbjct: 223 FHXGKPEVAKQVIEAVDEEKNLITFKMIEGDIMDHYKNFKFTMQATPKGKGSVVHWTLEY 282

Query: 123 EKLHENIPDSHSLLEFCVGISKDIDAHLMKGN 155
           EKLHENIPDS+SLLE  +G+S+DIDAHL+KGN
Sbjct: 283 EKLHENIPDSYSLLELVMGMSRDIDAHLIKGN 314

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BLAST of Lag0041252 vs. ExPASy Swiss-Prot
Match: Q9SSK5 (MLP-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=MLP43 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.8e-47
Identity = 83/152 (54.61%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 2   AMSGYGKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWN 61
           A S  GKL+ +VEI A   KFH +  +RPHH+S  + DK+  CEL +GDWG+VGSI+ W 
Sbjct: 4   ASSLVGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWK 63

Query: 62  YFHDGKTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPK--GKGSVVHWT 121
           Y HDGK  VGK+ IEAVD EKNLI+FKV++GDL+ +YK+F +T+Q  PK    GS+ HW 
Sbjct: 64  YVHDGKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAHWH 123

Query: 122 MEYEKLHENIPDSHSLLEFCVGISKDIDAHLM 152
           +EYEK+ E +    +LL+FCV ISK+ID HL+
Sbjct: 124 LEYEKISEEVAHPETLLQFCVEISKEIDEHLL 155

[Close]

BLAST of Lag0041252 vs. ExPASy Swiss-Prot
Match: Q941R6 (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2)

HSP 1 Score: 188.3 bits (477), Expect = 6.3e-47
Identity = 82/147 (55.78%), Postives = 109/147 (74.15%), Query Frame = 0


Query: 7   GKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWNYFHDG 66
           GKL+ D+EI A   KFH +   RPHH+S  +  K+Q CEL +GDWG+VGSI+ WNY HDG
Sbjct: 22  GKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYVHDG 81

Query: 67  KTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPK--GKGSVVHWTMEYEK 126
           + +V K+ IEAV+ EKNLI+F+VI+GDLLK+YK+F  TIQ  PK  G GSVVHW +EYEK
Sbjct: 82  EAKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEK 141

Query: 127 LHENIPDSHSLLEFCVGISKDIDAHLM 152
           + + +    + L+FCV +SK+ID HL+
Sbjct: 142 IDDKVAHPETFLDFCVEVSKEIDEHLL 168

[Close]

BLAST of Lag0041252 vs. ExPASy Swiss-Prot
Match: Q9SSK9 (MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-46
Identity = 82/152 (53.95%), Postives = 110/152 (72.37%), Query Frame = 0


Query: 2   AMSGYGKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWN 61
           A S  GKL+ DVEI A   KFH +   +PHH+S  S   +Q C+L +GDWG VGSI+ WN
Sbjct: 19  ASSLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGTVGSIVFWN 78

Query: 62  YFHDGKTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPK--GKGSVVHWT 121
           Y HDG+ +V K+ IEAV+ +KNLI+F+VI+GDL+K+YK+F  TIQ  PK  G GS+VHW 
Sbjct: 79  YVHDGEAKVAKERIEAVEPDKNLITFRVIEGDLMKEYKSFLLTIQVTPKPGGPGSIVHWH 138

Query: 122 MEYEKLHENIPDSHSLLEFCVGISKDIDAHLM 152
           +EYEK+ E +    +LL+FCV +SK+ID HL+
Sbjct: 139 LEYEKISEEVAHPETLLQFCVEVSKEIDEHLL 170

[Close]

BLAST of Lag0041252 vs. ExPASy Swiss-Prot
Match: Q9SSK7 (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.0e-45
Identity = 80/152 (52.63%), Postives = 111/152 (73.03%), Query Frame = 0


Query: 2   AMSGYGKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWN 61
           A S  GKL+ +VEI A   +FH +   +PHH+S  S   +QSC+L +GDWG VGSI+ WN
Sbjct: 6   APSLVGKLETEVEIKASAGQFHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWN 65

Query: 62  YFHDGKTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPK--GKGSVVHWT 121
           Y HDG+ +V K+ IEAV+ EKNLI+F+VI+GDL+K+YK+F  TIQ  PK  G GS+VHW 
Sbjct: 66  YVHDGEAKVAKERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQVTPKHGGPGSIVHWH 125

Query: 122 MEYEKLHENIPDSHSLLEFCVGISKDIDAHLM 152
           +EYEK+ + +    +LL+FCV +S++ID HL+
Sbjct: 126 LEYEKISDEVAHPETLLQFCVEVSQEIDEHLL 157

[Close]

BLAST of Lag0041252 vs. ExPASy Swiss-Prot
Match: P85524 (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 5.3e-30
Identity = 60/146 (41.10%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 7   GKLQADVEINAPPSKFHELLPKRPHHISNVSGDKVQSCELDDGDWGRVGSIISWNYFHDG 66
           GK+   VEI +    F+E+   R + IS +S   +Q  +L +G+WG VGS+I + Y  DG
Sbjct: 5   GKMVKQVEILSDGIVFYEIFRYRLYLISEMSPVNIQGVDLLEGNWGTVGSVIFFKYTIDG 64

Query: 67  KTRVGKDIIEAVDEEKNLISFKVIDGDLLKDYKTFRYTIQAIPKGKGSVVHWTMEYEKLH 126
           K +  KDI+EA+DEE   ++FK+++GDL++ YKTF   +Q   KG+ + V WT  YEKL 
Sbjct: 65  KEKTAKDIVEAIDEETKSVTFKIVEGDLMELYKTFIIIVQVDTKGEHNSVTWTFHYEKLK 124

Query: 127 ENIPDSHSLLEFCVGISKDIDAHLMK 153
           E++ + ++L+ FC+ I+KDI+ + +K
Sbjct: 125 EDVEEPNTLMNFCIEITKDIETYHLK 150

The following BLAST results are available for this feature:

BLAST of Lag0041252 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140475.1	2.4e-67	78.95	MLP-like protein 31 [Cucumis sativus] >KAE8648135.1 hypothetical protein Csa_021...	[more]
XP_038893088.1	3.1e-67	80.26	MLP-like protein 31 [Benincasa hispida]	[more]
XP_022155380.1	2.7e-63	76.35	LOW QUALITY PROTEIN: MLP-like protein 31 [Momordica charantia]	[more]
XP_038893047.1	1.3e-60	73.03	MLP-like protein 31 [Benincasa hispida]	[more]
XP_022155376.1	1.6e-60	71.05	MLP-like protein 28 [Momordica charantia]	[more]

BLAST of Lag0041252 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SSK5	2.8e-47	54.61	MLP-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=MLP43 PE=1 SV=1	[more]
Q941R6	6.3e-47	55.78	MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2	[more]
Q9SSK9	1.8e-46	53.95	MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1	[more]
Q9SSK7	2.0e-45	52.63	MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1	[more]
P85524	5.3e-30	41.10	Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 4..153 e-value: 2.2E-66 score: 236.5
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 5..152 e-value: 1.0E-51 score: 174.8
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 1..153 e-value: 6.3E-54 score: 184.2
None	No IPR available	PANTHER	PTHR31907:SF4	MLP-LIKE PROTEIN 34-RELATED	coord: 3..151
None	No IPR available	PANTHER	PTHR31907	MLP-LIKE PROTEIN 423	coord: 3..151
None	No IPR available	CDD	cd07816	Bet_v1-like	coord: 7..150 e-value: 1.08416E-41 score: 134.239
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 3..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0041252.1	Lag0041252.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response